BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 003799
         (794 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255551751|ref|XP_002516921.1| isoleucyl tRNA synthetase, putative [Ricinus communis]
 gi|223544009|gb|EEF45535.1| isoleucyl tRNA synthetase, putative [Ricinus communis]
          Length = 1102

 Score =  915 bits (2366), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/569 (79%), Positives = 503/569 (88%), Gaps = 14/569 (2%)

Query: 17  PREAT--IAMMQSSSYRVLSRRTCS-SFRKKASVNLFDSRGSSSLKFLSFLNVTCYSICS 73
           P EAT  IAM  SSS R L+RR+CS S R   +V++F  RGSSS K LSFLN   Y   S
Sbjct: 11  PGEATTAIAMFHSSSSRALTRRSCSPSLRNVTAVDVFYYRGSSSTKVLSFLNTNRYCTYS 70

Query: 74  GDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKL 133
            DEF +SSKRRSRGPVMAAKK+++GEK+EEG+YKHTVDLPKTTF MRANAL REPE+ KL
Sbjct: 71  SDEFGTSSKRRSRGPVMAAKKSSDGEKQEEGKYKHTVDLPKTTFSMRANALTREPELQKL 130

Query: 134 WDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYV 193
           WDD+QVF RV DKNDG NF+LHDGPPYANG+LH+GHA+NKILKD+INRYK+LQNYKV +V
Sbjct: 131 WDDNQVFKRVVDKNDGGNFILHDGPPYANGDLHIGHAMNKILKDVINRYKILQNYKVHFV 190

Query: 194 PGWDCHGLPIELK----------VLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASF 243
           PGWDCHGLPIELK           LQSLD+ A++DLTPSKLRAKAAKFAKATVK QMASF
Sbjct: 191 PGWDCHGLPIELKGKYKVLFWLRFLQSLDQGAREDLTPSKLRAKAAKFAKATVKTQMASF 250

Query: 244 KRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELE 303
           KRYGVWADW+NPYLTLDP+YEAAQIEVFGQM+LQGYIYRG+KPVHWSPSS TALAEAELE
Sbjct: 251 KRYGVWADWDNPYLTLDPDYEAAQIEVFGQMALQGYIYRGRKPVHWSPSSHTALAEAELE 310

Query: 304 YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQY 363
           YPEGHVS+SIYA+FR+ SAPP++  LL EF PDL LA+WTTTPWTVPANAAVAVN+KLQY
Sbjct: 311 YPEGHVSKSIYAIFRVASAPPTSRLLLEEFFPDLFLAIWTTTPWTVPANAAVAVNSKLQY 370

Query: 364 AVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLA 423
           AVVE+QSL E  S +P NKK R GNVL++QKK+F+IVASDL+PTLEAKW  KLVIKKTL+
Sbjct: 371 AVVEVQSL-EDASTSPGNKKRRFGNVLREQKKLFLIVASDLMPTLEAKWSVKLVIKKTLS 429

Query: 424 GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSP 483
           GSDLENCRY+HP+DNR+CPVVIGGDYITTESGTGLVHTAPGHGQEDY+T +KYGLP+LSP
Sbjct: 430 GSDLENCRYIHPIDNRECPVVIGGDYITTESGTGLVHTAPGHGQEDYITGMKYGLPVLSP 489

Query: 484 VDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFR 543
           VDD GKFTEEA  FSGLDVLG+GNVAVVKYLDEQMS++MEE YEHKYPYDWRTKKPTIFR
Sbjct: 490 VDDGGKFTEEAAPFSGLDVLGEGNVAVVKYLDEQMSIVMEESYEHKYPYDWRTKKPTIFR 549

Query: 544 ATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           ATEQWFASVEGFRQAAMDAIG VKW+PPQ
Sbjct: 550 ATEQWFASVEGFRQAAMDAIGHVKWIPPQ 578



 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 171/205 (83%), Positives = 193/205 (94%)

Query: 574 APGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSIS 633
           AP YGADVLRLWVSSVDYTGDVMIGPQ+LRQMSDIYRKLRGTLRYLLGNLHDW+  +++S
Sbjct: 759 APAYGADVLRLWVSSVDYTGDVMIGPQILRQMSDIYRKLRGTLRYLLGNLHDWKADDAVS 818

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
           YDDLPMID++AL+QLEN+VKNIRESYE+YQFFKIFQIIQRF+IVDLSNFYFDVAKDRLY 
Sbjct: 819 YDDLPMIDKHALYQLENVVKNIRESYENYQFFKIFQIIQRFVIVDLSNFYFDVAKDRLYV 878

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
           GGTT+FTR+SCQTVL+AHLLSIV+V+APILPHLAEDVWQNLPF + LEDGS A+FVFESK
Sbjct: 879 GGTTTFTRKSCQTVLAAHLLSIVKVVAPILPHLAEDVWQNLPFPHVLEDGSVAKFVFESK 938

Query: 754 WPVLDEKWRTFPVGEIYFWGKILEV 778
           WP  +EKW +FP+ EI FWGKILE+
Sbjct: 939 WPASNEKWLSFPIEEIDFWGKILEL 963


>gi|356564073|ref|XP_003550281.1| PREDICTED: isoleucyl-tRNA synthetase-like [Glycine max]
          Length = 1093

 Score =  895 bits (2313), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/571 (74%), Positives = 491/571 (85%), Gaps = 2/571 (0%)

Query: 4   ILKSFASNSSVSTPREATIAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLKFLSF 63
           +LKS  SN S    +    +M Q+S YRVL R  CSS R+  S++LF S G SS+K + F
Sbjct: 3   LLKSLTSNPSAFNFKPTQSSMAQTSPYRVLLRTACSSSRRTNSIDLFYSWGISSVKVVPF 62

Query: 64  LNVTCYSICSGDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANA 123
            N++ Y   S D  C+S KRRSRGPVMA KKA+EG K+E+G+YKHTVDLPKT FGMRAN+
Sbjct: 63  SNISNYCTYSRDNICAS-KRRSRGPVMAGKKASEGIKQEDGKYKHTVDLPKTAFGMRANS 121

Query: 124 LVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYK 183
            VREPEI K+W+++QVF +V +KN GENF+LHDGPPYANG+LH+GHALNKILKDIINRYK
Sbjct: 122 SVREPEIQKIWEENQVFKKVVEKNSGENFILHDGPPYANGDLHIGHALNKILKDIINRYK 181

Query: 184 LLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASF 243
           +LQNYKV ++PGWDCHGLPIELKVLQSLD++A+ +LTP KLRAKAAKFAK TVK QM+SF
Sbjct: 182 VLQNYKVNFIPGWDCHGLPIELKVLQSLDQNARNELTPLKLRAKAAKFAKETVKKQMSSF 241

Query: 244 KRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELE 303
           KRYGVWADWN+PYLTL+PEYEAAQIEVFGQM+L+GYIYRG+KPVHWSPSSRTALAEAELE
Sbjct: 242 KRYGVWADWNDPYLTLNPEYEAAQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAEAELE 301

Query: 304 YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQY 363
           YPE HVSRSIYA+FR+VSAP + S LL EF P+L LAVWTTTPWT+PANAAVAVN KL+Y
Sbjct: 302 YPEKHVSRSIYAIFRVVSAPLTPSSLLQEF-PNLYLAVWTTTPWTIPANAAVAVNPKLEY 360

Query: 364 AVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLA 423
           AVVEI+SL E D ++  NKK   G VLKD+K  F+IVAS+LVP+LEAKWG KLV+K    
Sbjct: 361 AVVEIKSLPEPDPSSGGNKKKGLGLVLKDEKLPFLIVASELVPSLEAKWGVKLVVKTRQL 420

Query: 424 GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSP 483
           GS+LEN RY+HPVD+R+CPVVIGGDYITTE+GTGLVHTAPGHGQEDYVT  KYGLPILSP
Sbjct: 421 GSELENYRYIHPVDDRECPVVIGGDYITTETGTGLVHTAPGHGQEDYVTGQKYGLPILSP 480

Query: 484 VDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFR 543
           VDD+G+FTEEAG+FSGLDVLG+GN AVVKYLDE +SLIMEE YEHKYPYDWRTKKPTIFR
Sbjct: 481 VDDDGRFTEEAGQFSGLDVLGEGNTAVVKYLDEHLSLIMEESYEHKYPYDWRTKKPTIFR 540

Query: 544 ATEQWFASVEGFRQAAMDAIGQVKWVPPQEA 574
           ATEQWFASVEGFR  AMDAIG VKWVPPQ A
Sbjct: 541 ATEQWFASVEGFRHTAMDAIGHVKWVPPQAA 571



 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 155/207 (74%), Positives = 183/207 (88%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           +E+P YGADVLRLWVSSVDYT DVMIGPQ+LRQMS++YRKLRGTLRYLL NLHDW+V  +
Sbjct: 748 RESPAYGADVLRLWVSSVDYTSDVMIGPQILRQMSEVYRKLRGTLRYLLANLHDWKVKYT 807

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + Y +LP IDQ+ALFQLEN+VK I+ +YE+YQFFKIFQI+QRF+IVDLSNFYFDVAKDRL
Sbjct: 808 VPYHELPRIDQHALFQLENVVKAIQGNYENYQFFKIFQILQRFVIVDLSNFYFDVAKDRL 867

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           Y GG+TS+TR+SCQTVL+AHLLSIVR+IAPILPHLAEDVWQNLPF Y  +DGS AE+VFE
Sbjct: 868 YVGGSTSYTRKSCQTVLAAHLLSIVRIIAPILPHLAEDVWQNLPFQYITQDGSIAEYVFE 927

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEV 778
           S+WP+ +E+    PV EI FW  ILE+
Sbjct: 928 SRWPISNERRLALPVEEINFWENILEL 954


>gi|222422851|dbj|BAH19412.1| AT5G49030 [Arabidopsis thaliana]
          Length = 955

 Score =  889 bits (2296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/573 (74%), Positives = 493/573 (86%), Gaps = 8/573 (1%)

Query: 1   MSFILKSFASNSSVSTPREAT-IAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLK 59
           MS   KSFA N     PREA  +AM+QSSSYRVLS ++CS+ R+   ++ F ++G SS+K
Sbjct: 1   MSSFFKSFAGN-----PREAAAMAMVQSSSYRVLSGKSCSNLRRNTPLDSFLAKGRSSVK 55

Query: 60  FLSFLNVTCYSICSGDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGM 119
             SFL V+ +S    +EF  SSKRRSRGPVMAAKKA+EGEK+E+G+YK TVDLPKT FGM
Sbjct: 56  AFSFLYVSRFSTEPNNEFGHSSKRRSRGPVMAAKKASEGEKQEDGKYKQTVDLPKTGFGM 115

Query: 120 RANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDII 179
           RAN+L REPE+ KLW+++QVF RV+D N+G +F+LHDGPPYANG+LHMGHALNKILKDII
Sbjct: 116 RANSLTREPELQKLWEENQVFKRVSDNNNGGSFILHDGPPYANGDLHMGHALNKILKDII 175

Query: 180 NRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQ 239
           NRYKLLQNYKV+YVPGWDCHGLPIELKVLQSLD++ +K+LTP KLRA AAKFAKATVK Q
Sbjct: 176 NRYKLLQNYKVQYVPGWDCHGLPIELKVLQSLDQEVRKELTPLKLRAMAAKFAKATVKTQ 235

Query: 240 MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 299
           M SFKR+GVWADWNNPYLTLD EYEAAQIEVFGQM+L+GYIYRG+KPVHWSPSSRTALAE
Sbjct: 236 MESFKRFGVWADWNNPYLTLDTEYEAAQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAE 295

Query: 300 AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 359
           AELEYPEGH+S+SIYA+F++V    + + LL+EF+P++ LAVWTTTPWT+PANAAVAVNA
Sbjct: 296 AELEYPEGHISKSIYAIFKLVGG--AKTSLLDEFIPNIYLAVWTTTPWTMPANAAVAVNA 353

Query: 360 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 419
           KLQY+VVE+QS  E +S   +NKK  PG VLK+Q+K+F+IVA+DLVP LEAKWG KL I 
Sbjct: 354 KLQYSVVEVQSFSEDESTVTSNKKKIPGKVLKNQQKLFVIVATDLVPALEAKWGVKLSIS 413

Query: 420 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 479
           KT  GSDLENCRY HP+DNR CPVVIGGDYITTESGTGLVHTAPGHGQEDY T LKYGLP
Sbjct: 414 KTFLGSDLENCRYTHPIDNRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGLKYGLP 473

Query: 480 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 539
           ++SPVDDEGKFTEEAG+F GL VLG+GN AVV YLDE MSL+MEE Y HKYPYDWRTKKP
Sbjct: 474 LVSPVDDEGKFTEEAGQFRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKP 533

Query: 540 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           TIFRATEQWFASVEGFR A MDAI  VKWVP Q
Sbjct: 534 TIFRATEQWFASVEGFRTATMDAINNVKWVPHQ 566



 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 167/207 (80%), Positives = 190/207 (91%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           ++AP YGADV+RLWVSSVDYTGDV+IGPQ+LRQMSDIYRKLRGTLRYLLGNLHDWRV N+
Sbjct: 745 KDAPAYGADVMRLWVSSVDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDNA 804

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + Y DLP+IDQ+ALFQLEN+VKNI+E YE+YQFFKIFQIIQRF IVDLSNFYFD+AKDRL
Sbjct: 805 VPYQDLPIIDQHALFQLENVVKNIQECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRL 864

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           YTGGT+SFTRRSCQTVLS HLLSI+RVIAPI+PHLAEDVWQNLPF Y  EDGSAAEFVFE
Sbjct: 865 YTGGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLPFEYRNEDGSAAEFVFE 924

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEV 778
            KWP L+E+W +FP  ++ FW ++LEV
Sbjct: 925 LKWPTLNEQWLSFPAEDVLFWQRLLEV 951


>gi|449433407|ref|XP_004134489.1| PREDICTED: isoleucine--tRNA ligase-like [Cucumis sativus]
          Length = 1093

 Score =  878 bits (2268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/566 (76%), Positives = 494/566 (87%), Gaps = 1/566 (0%)

Query: 7   SFASNSSVSTPREATIAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLKFLSFLNV 66
           SFA+ SS    +EAT   +Q+ SY VLS+R  S+ R+ + ++ F  RGSSS K  +FL V
Sbjct: 6   SFAAGSSAFKCKEATKPFIQTPSYTVLSQRISSTLRR-SYISSFRFRGSSSAKVFTFLTV 64

Query: 67  TCYSICSGDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVR 126
           T YS    DEF  SSKRRSRGP+MAAKKA++G  + +G+YKHTVDLPKT FGMRAN+LVR
Sbjct: 65  TRYSTYLNDEFPPSSKRRSRGPIMAAKKASKGTNEGDGKYKHTVDLPKTAFGMRANSLVR 124

Query: 127 EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQ 186
           EPEI K+WDDHQVF RV ++N GENF+LHDGPPYANG+LHMGHALNKILKDIINRYKLLQ
Sbjct: 125 EPEIQKIWDDHQVFNRVVERNTGENFILHDGPPYANGDLHMGHALNKILKDIINRYKLLQ 184

Query: 187 NYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRY 246
           NYKVR+VPGWDCHGLPIELKVLQSLD++A+KDLTP KLR KAAKFAKATVKAQMASFKRY
Sbjct: 185 NYKVRFVPGWDCHGLPIELKVLQSLDKEARKDLTPIKLRDKAAKFAKATVKAQMASFKRY 244

Query: 247 GVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPE 306
           GVWADWNNPYLTL PEYEAAQIEVFGQM++QGYI+RG+KPVHWSPSSRTALAEAELEYPE
Sbjct: 245 GVWADWNNPYLTLSPEYEAAQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPE 304

Query: 307 GHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVV 366
           GH SRSIYA+FR+V   PS+ G+L EFLPDL LA+WTTTPWT+PANAAVAVNAKL YA++
Sbjct: 305 GHTSRSIYAIFRLVKEGPSSGGVLQEFLPDLCLAIWTTTPWTIPANAAVAVNAKLHYAII 364

Query: 367 EIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSD 426
           E+ +  E  S    NKK RPGN+LK+ K+ F++VASDLVPTLEAKWG KLV+KK L GS+
Sbjct: 365 ELLAPSEDVSVLTGNKKKRPGNILKEGKRPFLVVASDLVPTLEAKWGVKLVVKKKLLGSE 424

Query: 427 LENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDD 486
           LENC Y+HP+D ++C VVIGGDYITTE+GTGLVHTAPGHGQEDY T LKYGLPI+SPVDD
Sbjct: 425 LENCSYIHPIDKKECQVVIGGDYITTETGTGLVHTAPGHGQEDYATGLKYGLPIISPVDD 484

Query: 487 EGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATE 546
           +GKFTEEAG+FSGLDVLGDGN AVVKYLD+  SLI+EE YEHKYPYDWRTKKPTIFRATE
Sbjct: 485 DGKFTEEAGQFSGLDVLGDGNTAVVKYLDDHFSLILEESYEHKYPYDWRTKKPTIFRATE 544

Query: 547 QWFASVEGFRQAAMDAIGQVKWVPPQ 572
           QWFASVEGFRQAA+DAIG+VKW+PPQ
Sbjct: 545 QWFASVEGFRQAAVDAIGEVKWIPPQ 570



 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 162/207 (78%), Positives = 183/207 (88%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           +EAPGYGADVLRLWVSSVDYTGDVMIG QVLRQMSDIYRKLRGTLR+LLGNLHDW   N+
Sbjct: 749 KEAPGYGADVLRLWVSSVDYTGDVMIGSQVLRQMSDIYRKLRGTLRFLLGNLHDWTEENA 808

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + Y DLP IDQ+ALFQLEN++ NIRESYESYQFFKIFQIIQRF+IVDLSNFYFDVAKDRL
Sbjct: 809 VQYQDLPKIDQHALFQLENVINNIRESYESYQFFKIFQIIQRFVIVDLSNFYFDVAKDRL 868

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           Y GG+TSFTRRSCQTVL+AH++SI R+IAPILPHLAEDVWQNLPF +T +DGS A+FVFE
Sbjct: 869 YVGGSTSFTRRSCQTVLAAHVVSIARIIAPILPHLAEDVWQNLPFQHTDDDGSVAKFVFE 928

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEV 778
           S+WP L++   + P  EI  W  ILE+
Sbjct: 929 SRWPSLNKTRLSLPEEEIDLWANILEL 955


>gi|449513369|ref|XP_004164308.1| PREDICTED: isoleucine--tRNA ligase-like [Cucumis sativus]
          Length = 1093

 Score =  874 bits (2258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/566 (76%), Positives = 493/566 (87%), Gaps = 1/566 (0%)

Query: 7   SFASNSSVSTPREATIAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLKFLSFLNV 66
           SFA+ SS    +EAT   +Q+ SY VLS+R  S+ R+ + ++ F  RGSSS K  +FL V
Sbjct: 6   SFAAGSSAFKCKEATKPFIQTPSYTVLSQRISSTLRR-SYISSFRFRGSSSAKVFTFLTV 64

Query: 67  TCYSICSGDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVR 126
           T  S    DEF  SSKRRSRGP+MAAKKA++G  + +G+YKHTVDLPKT FGMRAN+LVR
Sbjct: 65  TRCSTYLNDEFPPSSKRRSRGPIMAAKKASKGTNEGDGKYKHTVDLPKTAFGMRANSLVR 124

Query: 127 EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQ 186
           EPEI K+WDDHQVF RV ++N GENF+LHDGPPYANG+LHMGHALNKILKDIINRYKLLQ
Sbjct: 125 EPEIQKIWDDHQVFNRVVERNTGENFILHDGPPYANGDLHMGHALNKILKDIINRYKLLQ 184

Query: 187 NYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRY 246
           NYKVR+VPGWDCHGLPIELKVLQSLD++A+KDLTP KLR KAAKFAKATVKAQMASFKRY
Sbjct: 185 NYKVRFVPGWDCHGLPIELKVLQSLDKEARKDLTPIKLRDKAAKFAKATVKAQMASFKRY 244

Query: 247 GVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPE 306
           GVWADWNNPYLTL PEYEAAQIEVFGQM++QGYI+RG+KPVHWSPSSRTALAEAELEYPE
Sbjct: 245 GVWADWNNPYLTLSPEYEAAQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPE 304

Query: 307 GHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVV 366
           GH SRSIYA+FR+V   PS+ G+L EFLPDL LA+WTTTPWT+PANAAVAVNAKL YA++
Sbjct: 305 GHTSRSIYAIFRLVKEGPSSGGVLQEFLPDLCLAIWTTTPWTIPANAAVAVNAKLHYAII 364

Query: 367 EIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSD 426
           E+ +  E  S    NKK RPGN+LK+ K+ F++VASDLVPTLEAKWG KLV+KK L GS+
Sbjct: 365 ELLAPSEDVSVLTGNKKKRPGNILKEGKRPFLVVASDLVPTLEAKWGVKLVVKKKLLGSE 424

Query: 427 LENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDD 486
           LENC Y+HP+D ++C VVIGGDYITTE+GTGLVHTAPGHGQEDY T LKYGLPI+SPVDD
Sbjct: 425 LENCSYIHPIDKKECQVVIGGDYITTETGTGLVHTAPGHGQEDYATGLKYGLPIISPVDD 484

Query: 487 EGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATE 546
           +GKFTEEAG+FSGLDVLGDGN AVVKYLD+  SLI+EE YEHKYPYDWRTKKPTIFRATE
Sbjct: 485 DGKFTEEAGQFSGLDVLGDGNTAVVKYLDDHFSLILEESYEHKYPYDWRTKKPTIFRATE 544

Query: 547 QWFASVEGFRQAAMDAIGQVKWVPPQ 572
           QWFASVEGFRQAA+DAIG+VKW+PPQ
Sbjct: 545 QWFASVEGFRQAAVDAIGEVKWIPPQ 570



 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 162/207 (78%), Positives = 183/207 (88%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           +EAPGYGADVLRLWVSSVDYTGDVMIG QVLRQMSDIYRKLRGTLR+LLGNLHDW   N+
Sbjct: 749 KEAPGYGADVLRLWVSSVDYTGDVMIGSQVLRQMSDIYRKLRGTLRFLLGNLHDWTEENA 808

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + Y DLP IDQ+ALFQLEN++ NIRESYESYQFFKIFQIIQRF+IVDLSNFYFDVAKDRL
Sbjct: 809 VQYQDLPKIDQHALFQLENVINNIRESYESYQFFKIFQIIQRFVIVDLSNFYFDVAKDRL 868

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           Y GG+TSFTRRSCQTVL+AH++SI R+IAPILPHLAEDVWQNLPF +T +DGS A+FVFE
Sbjct: 869 YVGGSTSFTRRSCQTVLAAHVVSIARIIAPILPHLAEDVWQNLPFQHTDDDGSVAKFVFE 928

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEV 778
           S+WP L++   + P  EI  W  ILE+
Sbjct: 929 SRWPSLNKTRLSLPEEEIDLWANILEL 955


>gi|297795625|ref|XP_002865697.1| hypothetical protein ARALYDRAFT_494966 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311532|gb|EFH41956.1| hypothetical protein ARALYDRAFT_494966 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1095

 Score =  867 bits (2241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/573 (75%), Positives = 495/573 (86%), Gaps = 8/573 (1%)

Query: 1   MSFILKSFASNSSVSTPREAT-IAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLK 59
           MS   KSFA N     PREA  +AM+QSSSYRVLS R+CS+ R+   ++ F ++G S +K
Sbjct: 1   MSSFFKSFAGN-----PREAAAMAMVQSSSYRVLSGRSCSNLRRNTPLDSFLAKGRSPVK 55

Query: 60  FLSFLNVTCYSICSGDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGM 119
             SFL V+ YS    +EF  SSKRRSRGPVMAAKKA+EGEK+E+G+YK TVDLPKT FGM
Sbjct: 56  AFSFLYVSGYSTEPNNEFGHSSKRRSRGPVMAAKKASEGEKQEDGKYKQTVDLPKTGFGM 115

Query: 120 RANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDII 179
           RAN+L REPE+ KLWD++QVF RV+D N+G +F+LHDGPPYANG+LHMGHALNKILKDII
Sbjct: 116 RANSLTREPELQKLWDENQVFKRVSDNNNGGSFILHDGPPYANGDLHMGHALNKILKDII 175

Query: 180 NRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQ 239
           NRYKLLQNYKV+YVPGWDCHGLPIELKVLQSLD++ +K+LTP KLRAKAAKFAKATVK Q
Sbjct: 176 NRYKLLQNYKVQYVPGWDCHGLPIELKVLQSLDQEVRKELTPLKLRAKAAKFAKATVKTQ 235

Query: 240 MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 299
           M SFKR+GVWADWNNPYLTLDPEYEAAQIEVFGQM+L+GYIYRG+KPVHWSPSSRTALAE
Sbjct: 236 MESFKRFGVWADWNNPYLTLDPEYEAAQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAE 295

Query: 300 AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 359
           AELEYPEGH+S+SIYA+F++V    + + LL+EF+P++ LAVWTTTPWT+PANAAVAVNA
Sbjct: 296 AELEYPEGHISKSIYAIFKVVGG--AKTSLLDEFVPNICLAVWTTTPWTMPANAAVAVNA 353

Query: 360 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 419
           KLQY+VVE+QS  E +SA   NKK  PG VLK+Q+K+F+IVA+DLVP LEAKWG KL+I 
Sbjct: 354 KLQYSVVEVQSFSEDESAVTGNKKKMPGKVLKNQQKLFVIVATDLVPALEAKWGVKLIIS 413

Query: 420 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 479
           KT  GSDLENCRY HP+DNR CPVVIGGDYITTESGTGLVHTAPGHGQEDY T LKYGLP
Sbjct: 414 KTFLGSDLENCRYTHPIDNRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGLKYGLP 473

Query: 480 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 539
           ++SPVDDEGKFTEEAG+F GL VLG+GN AVV YLDE MSL+MEE Y HKYPYDWRTKKP
Sbjct: 474 LISPVDDEGKFTEEAGRFRGLSVLGEGNSAVVSYLDENMSLVMEESYAHKYPYDWRTKKP 533

Query: 540 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           TIFRATEQWFASVEGFR A MDAI  VKWVP Q
Sbjct: 534 TIFRATEQWFASVEGFRTATMDAINNVKWVPDQ 566



 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 163/205 (79%), Positives = 187/205 (91%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           ++AP YGADV+RLWVSSVDYTGDV+IGPQ+LRQMSDIYRKLRGTLRYLLGNLHDWRV N 
Sbjct: 745 KDAPAYGADVMRLWVSSVDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDND 804

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + Y+DLP+IDQ+ALFQLEN+VKNI E YE+YQFFKIFQIIQRF IVDLSNFYFD+AKDRL
Sbjct: 805 VPYEDLPIIDQHALFQLENVVKNIHECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRL 864

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           YTGGT+SFTRRSCQTVLS HLLSI+RVIAPI+PHLAEDVWQNLPF Y  EDGSAA+FVFE
Sbjct: 865 YTGGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLPFEYRNEDGSAAKFVFE 924

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKIL 776
            KWP ++E+W +FP  ++ FW ++L
Sbjct: 925 LKWPTVNEQWLSFPAEDVLFWQRLL 949


>gi|334188274|ref|NP_001190497.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332008381|gb|AED95764.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 1279

 Score =  867 bits (2239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/573 (75%), Positives = 495/573 (86%), Gaps = 8/573 (1%)

Query: 1   MSFILKSFASNSSVSTPREAT-IAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLK 59
           MS   KSFA N     PREA  +AM+QSSSYRVLS ++CS+ R+   ++ F ++G SS+K
Sbjct: 187 MSSFFKSFAGN-----PREAAAMAMVQSSSYRVLSGKSCSNLRRNTPLDSFLAKGRSSVK 241

Query: 60  FLSFLNVTCYSICSGDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGM 119
             SFL V+ +S    +EF  SSKRRSRGPVMAAKKA+EGEK+E+G+YK TVDLPKT FGM
Sbjct: 242 AFSFLYVSRFSTEPNNEFGHSSKRRSRGPVMAAKKASEGEKQEDGKYKQTVDLPKTGFGM 301

Query: 120 RANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDII 179
           RAN+L REPE+ KLW+++QVF RV+D N+G +F+LHDGPPYANG+LHMGHALNKILKDII
Sbjct: 302 RANSLTREPELQKLWEENQVFKRVSDNNNGGSFILHDGPPYANGDLHMGHALNKILKDII 361

Query: 180 NRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQ 239
           NRYKLLQNYKV+YVPGWDCHGLPIELKVLQSLD++ +K+LTP KLRAKAAKFAKATVK Q
Sbjct: 362 NRYKLLQNYKVQYVPGWDCHGLPIELKVLQSLDQEVRKELTPLKLRAKAAKFAKATVKTQ 421

Query: 240 MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 299
           M SFKR+GVWADWNNPYLTLDPEYEAAQIEVFGQM+L+GYIYRG+KPVHWSPSSRTALAE
Sbjct: 422 MESFKRFGVWADWNNPYLTLDPEYEAAQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAE 481

Query: 300 AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 359
           AELEYPEGH+S+SIYA+F++V    + + LL+EF+P++ LAVWTTTPWT+PANAAVAVNA
Sbjct: 482 AELEYPEGHISKSIYAIFKLVGG--AKTSLLDEFIPNIYLAVWTTTPWTMPANAAVAVNA 539

Query: 360 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 419
           KLQY+VVE+QS  E +S   +NKK  PG VLK+Q+K+F+IVA+DLVP LEAKWG KL I 
Sbjct: 540 KLQYSVVEVQSFSEDESTVTSNKKKIPGKVLKNQQKLFVIVATDLVPALEAKWGVKLSIS 599

Query: 420 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 479
           KT  GSDLENCRY HP+DNR CPVVIGGDYITTESGTGLVHTAPGHGQEDY T LKYGLP
Sbjct: 600 KTFLGSDLENCRYTHPIDNRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGLKYGLP 659

Query: 480 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 539
           ++SPVDDEGKFTEEAG+F GL VLG+GN AVV YLDE MSL+MEE Y HKYPYDWRTKKP
Sbjct: 660 LVSPVDDEGKFTEEAGQFRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKP 719

Query: 540 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           TIFRATEQWFASVEGFR A MDAI  VKWVP Q
Sbjct: 720 TIFRATEQWFASVEGFRTATMDAINNVKWVPHQ 752



 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 166/207 (80%), Positives = 190/207 (91%)

Query: 572  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
            ++AP YGADV+RLWVSSVDYTGDV+IGPQ+LRQMSDIYRKLRGTLRYLLGNLHDWRV N+
Sbjct: 931  KDAPAYGADVMRLWVSSVDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDNA 990

Query: 632  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
            + Y DLP+IDQ+ALFQLEN+VKNI+E YE+YQFFKIFQIIQRF IVDLSNFYFD+AKDRL
Sbjct: 991  VPYQDLPIIDQHALFQLENVVKNIQECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRL 1050

Query: 692  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
            YTGGT+SFTRRSCQTVLS HLLSI+RVIAPI+PHLAEDVWQNLPF Y  EDGSAAEFVFE
Sbjct: 1051 YTGGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLPFEYRNEDGSAAEFVFE 1110

Query: 752  SKWPVLDEKWRTFPVGEIYFWGKILEV 778
             KWP L+E+W +FP  ++ FW ++LE+
Sbjct: 1111 LKWPTLNEQWLSFPAEDVLFWQRLLEL 1137


>gi|225432320|ref|XP_002276207.1| PREDICTED: isoleucyl-tRNA synthetase-like [Vitis vinifera]
          Length = 1105

 Score =  866 bits (2237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/567 (76%), Positives = 491/567 (86%), Gaps = 2/567 (0%)

Query: 8   FASNSSVSTPREATI--AMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLKFLSFLN 65
           F    SV++ R   +  A ++ S   VLS+RT SSFR   SV+L   RGSSS+   S L 
Sbjct: 16  FQEKGSVASIRTGKVEYAGLRVSVLHVLSQRTASSFRSMNSVSLLYLRGSSSVHVPSLLK 75

Query: 66  VTCYSICSGDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALV 125
              YS  S D   SSSKRRSRGPVMAAKKA+E  K+E+GRYKHTVDLPKT FGMRAN+  
Sbjct: 76  TATYSSYSSDNSSSSSKRRSRGPVMAAKKASEAAKQEDGRYKHTVDLPKTAFGMRANSTS 135

Query: 126 REPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLL 185
           REPEI KLWDD+QVF RV D+N+G NF+LHDGPPYANG+LHMGHALNKILKDIINRYKLL
Sbjct: 136 REPEIQKLWDDNQVFKRVVDRNNGGNFILHDGPPYANGDLHMGHALNKILKDIINRYKLL 195

Query: 186 QNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKR 245
           QNYKV YVPGWDCHGLPIELKVLQSLD+DA+++LTP KLRAKA++FAKATVK QMASFKR
Sbjct: 196 QNYKVHYVPGWDCHGLPIELKVLQSLDQDARRELTPLKLRAKASRFAKATVKNQMASFKR 255

Query: 246 YGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYP 305
           YGVW DWNNPYLTLDPEYEA+QIEVFGQM+LQGYIYRG+KPVHWSPSSRTALAEAELEYP
Sbjct: 256 YGVWGDWNNPYLTLDPEYEASQIEVFGQMALQGYIYRGRKPVHWSPSSRTALAEAELEYP 315

Query: 306 EGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAV 365
           EGH+S+SIYA+FR+VSAP ++   L +FLPDL LA+WTTTPWT+PANAAVAVNAKLQY+V
Sbjct: 316 EGHISKSIYAIFRLVSAPVTSGTSLEDFLPDLCLAIWTTTPWTIPANAAVAVNAKLQYSV 375

Query: 366 VEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGS 425
           VE+ S LE  S +  N+K R GN LK+QK +F++VASDLVPTLEAKWG KLVIKKTL GS
Sbjct: 376 VEVHSPLEDVSKSKQNEKGRLGNALKEQKNLFLVVASDLVPTLEAKWGLKLVIKKTLLGS 435

Query: 426 DLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVD 485
           DLENCRY+HP+D R+CPVVIGGDYITTESGTGLVHTAPGHGQEDYVT +KYGLPILSPVD
Sbjct: 436 DLENCRYIHPIDKRECPVVIGGDYITTESGTGLVHTAPGHGQEDYVTGMKYGLPILSPVD 495

Query: 486 DEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRAT 545
           D+GKFTEEAG+FSGLDVLGDGN AVV++LDE +S+IMEEPY+HKYPYDWRTKKPTIFRAT
Sbjct: 496 DDGKFTEEAGQFSGLDVLGDGNAAVVRFLDENLSIIMEEPYKHKYPYDWRTKKPTIFRAT 555

Query: 546 EQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           EQWFASVEGFRQ AM AIGQV W+P Q
Sbjct: 556 EQWFASVEGFRQVAMTAIGQVTWIPAQ 582



 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 179/207 (86%), Positives = 190/207 (91%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           +EAPGYGADVLRLWVSSVDYTGD MIG QVLRQMSDIYRKLRGTLRYLL NLHDW+  N+
Sbjct: 761 KEAPGYGADVLRLWVSSVDYTGDAMIGAQVLRQMSDIYRKLRGTLRYLLANLHDWKADNA 820

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + Y DLPMID++ALFQLEN+VKNIRESYESYQFFKIFQIIQRF IVDLSNFYFDVAKDRL
Sbjct: 821 VPYCDLPMIDRHALFQLENVVKNIRESYESYQFFKIFQIIQRFAIVDLSNFYFDVAKDRL 880

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           Y GGTTSFTRRSCQTVL+AHLLSIVRVIAPILPHLAEDVWQNLPF YT EDGS AEFVFE
Sbjct: 881 YVGGTTSFTRRSCQTVLAAHLLSIVRVIAPILPHLAEDVWQNLPFQYTNEDGSIAEFVFE 940

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEV 778
           S+WP L+EKW TFP  EI FWGKILE+
Sbjct: 941 SRWPALNEKWLTFPTEEIDFWGKILEL 967


>gi|22327660|ref|NP_199714.2| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
 gi|19424030|gb|AAL87306.1| putative isoleucyl-tRNA synthetase [Arabidopsis thaliana]
 gi|23296804|gb|AAN13174.1| putative isoleucyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332008379|gb|AED95762.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 1093

 Score =  863 bits (2230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/573 (75%), Positives = 495/573 (86%), Gaps = 8/573 (1%)

Query: 1   MSFILKSFASNSSVSTPREAT-IAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLK 59
           MS   KSFA N     PREA  +AM+QSSSYRVLS ++CS+ R+   ++ F ++G SS+K
Sbjct: 1   MSSFFKSFAGN-----PREAAAMAMVQSSSYRVLSGKSCSNLRRNTPLDSFLAKGRSSVK 55

Query: 60  FLSFLNVTCYSICSGDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGM 119
             SFL V+ +S    +EF  SSKRRSRGPVMAAKKA+EGEK+E+G+YK TVDLPKT FGM
Sbjct: 56  AFSFLYVSRFSTEPNNEFGHSSKRRSRGPVMAAKKASEGEKQEDGKYKQTVDLPKTGFGM 115

Query: 120 RANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDII 179
           RAN+L REPE+ KLW+++QVF RV+D N+G +F+LHDGPPYANG+LHMGHALNKILKDII
Sbjct: 116 RANSLTREPELQKLWEENQVFKRVSDNNNGGSFILHDGPPYANGDLHMGHALNKILKDII 175

Query: 180 NRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQ 239
           NRYKLLQNYKV+YVPGWDCHGLPIELKVLQSLD++ +K+LTP KLRAKAAKFAKATVK Q
Sbjct: 176 NRYKLLQNYKVQYVPGWDCHGLPIELKVLQSLDQEVRKELTPLKLRAKAAKFAKATVKTQ 235

Query: 240 MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 299
           M SFKR+GVWADWNNPYLTLDPEYEAAQIEVFGQM+L+GYIYRG+KPVHWSPSSRTALAE
Sbjct: 236 MESFKRFGVWADWNNPYLTLDPEYEAAQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAE 295

Query: 300 AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 359
           AELEYPEGH+S+SIYA+F++V    + + LL+EF+P++ LAVWTTTPWT+PANAAVAVNA
Sbjct: 296 AELEYPEGHISKSIYAIFKLVGG--AKTSLLDEFIPNIYLAVWTTTPWTMPANAAVAVNA 353

Query: 360 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 419
           KLQY+VVE+QS  E +S   +NKK  PG VLK+Q+K+F+IVA+DLVP LEAKWG KL I 
Sbjct: 354 KLQYSVVEVQSFSEDESTVTSNKKKIPGKVLKNQQKLFVIVATDLVPALEAKWGVKLSIS 413

Query: 420 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 479
           KT  GSDLENCRY HP+DNR CPVVIGGDYITTESGTGLVHTAPGHGQEDY T LKYGLP
Sbjct: 414 KTFLGSDLENCRYTHPIDNRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGLKYGLP 473

Query: 480 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 539
           ++SPVDDEGKFTEEAG+F GL VLG+GN AVV YLDE MSL+MEE Y HKYPYDWRTKKP
Sbjct: 474 LVSPVDDEGKFTEEAGQFRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKP 533

Query: 540 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           TIFRATEQWFASVEGFR A MDAI  VKWVP Q
Sbjct: 534 TIFRATEQWFASVEGFRTATMDAINNVKWVPHQ 566



 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 166/207 (80%), Positives = 190/207 (91%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           ++AP YGADV+RLWVSSVDYTGDV+IGPQ+LRQMSDIYRKLRGTLRYLLGNLHDWRV N+
Sbjct: 745 KDAPAYGADVMRLWVSSVDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDNA 804

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + Y DLP+IDQ+ALFQLEN+VKNI+E YE+YQFFKIFQIIQRF IVDLSNFYFD+AKDRL
Sbjct: 805 VPYQDLPIIDQHALFQLENVVKNIQECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRL 864

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           YTGGT+SFTRRSCQTVLS HLLSI+RVIAPI+PHLAEDVWQNLPF Y  EDGSAAEFVFE
Sbjct: 865 YTGGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLPFEYRNEDGSAAEFVFE 924

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEV 778
            KWP L+E+W +FP  ++ FW ++LE+
Sbjct: 925 LKWPTLNEQWLSFPAEDVLFWQRLLEL 951


>gi|79330394|ref|NP_001032042.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332008380|gb|AED95763.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 955

 Score =  862 bits (2228), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/573 (75%), Positives = 495/573 (86%), Gaps = 8/573 (1%)

Query: 1   MSFILKSFASNSSVSTPREAT-IAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLK 59
           MS   KSFA N     PREA  +AM+QSSSYRVLS ++CS+ R+   ++ F ++G SS+K
Sbjct: 1   MSSFFKSFAGN-----PREAAAMAMVQSSSYRVLSGKSCSNLRRNTPLDSFLAKGRSSVK 55

Query: 60  FLSFLNVTCYSICSGDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGM 119
             SFL V+ +S    +EF  SSKRRSRGPVMAAKKA+EGEK+E+G+YK TVDLPKT FGM
Sbjct: 56  AFSFLYVSRFSTEPNNEFGHSSKRRSRGPVMAAKKASEGEKQEDGKYKQTVDLPKTGFGM 115

Query: 120 RANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDII 179
           RAN+L REPE+ KLW+++QVF RV+D N+G +F+LHDGPPYANG+LHMGHALNKILKDII
Sbjct: 116 RANSLTREPELQKLWEENQVFKRVSDNNNGGSFILHDGPPYANGDLHMGHALNKILKDII 175

Query: 180 NRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQ 239
           NRYKLLQNYKV+YVPGWDCHGLPIELKVLQSLD++ +K+LTP KLRAKAAKFAKATVK Q
Sbjct: 176 NRYKLLQNYKVQYVPGWDCHGLPIELKVLQSLDQEVRKELTPLKLRAKAAKFAKATVKTQ 235

Query: 240 MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 299
           M SFKR+GVWADWNNPYLTLDPEYEAAQIEVFGQM+L+GYIYRG+KPVHWSPSSRTALAE
Sbjct: 236 MESFKRFGVWADWNNPYLTLDPEYEAAQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAE 295

Query: 300 AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 359
           AELEYPEGH+S+SIYA+F++V    + + LL+EF+P++ LAVWTTTPWT+PANAAVAVNA
Sbjct: 296 AELEYPEGHISKSIYAIFKLVGG--AKTSLLDEFIPNIYLAVWTTTPWTMPANAAVAVNA 353

Query: 360 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 419
           KLQY+VVE+QS  E +S   +NKK  PG VLK+Q+K+F+IVA+DLVP LEAKWG KL I 
Sbjct: 354 KLQYSVVEVQSFSEDESTVTSNKKKIPGKVLKNQQKLFVIVATDLVPALEAKWGVKLSIS 413

Query: 420 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 479
           KT  GSDLENCRY HP+DNR CPVVIGGDYITTESGTGLVHTAPGHGQEDY T LKYGLP
Sbjct: 414 KTFLGSDLENCRYTHPIDNRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGLKYGLP 473

Query: 480 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 539
           ++SPVDDEGKFTEEAG+F GL VLG+GN AVV YLDE MSL+MEE Y HKYPYDWRTKKP
Sbjct: 474 LVSPVDDEGKFTEEAGQFRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKP 533

Query: 540 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           TIFRATEQWFASVEGFR A MDAI  VKWVP Q
Sbjct: 534 TIFRATEQWFASVEGFRTATMDAINNVKWVPHQ 566



 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 167/207 (80%), Positives = 190/207 (91%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           ++AP YGADV+RLWVSSVDYTGDV+IGPQ+LRQMSDIYRKLRGTLRYLLGNLHDWRV N+
Sbjct: 745 KDAPAYGADVMRLWVSSVDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDNA 804

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + Y DLP+IDQ+ALFQLEN+VKNI+E YE+YQFFKIFQIIQRF IVDLSNFYFD+AKDRL
Sbjct: 805 VPYQDLPIIDQHALFQLENVVKNIQECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRL 864

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           YTGGT+SFTRRSCQTVLS HLLSI+RVIAPI+PHLAEDVWQNLPF Y  EDGSAAEFVFE
Sbjct: 865 YTGGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLPFEYRNEDGSAAEFVFE 924

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEV 778
            KWP L+E+W +FP  ++ FW ++LEV
Sbjct: 925 LKWPTLNEQWLSFPAEDVLFWQRLLEV 951


>gi|147804918|emb|CAN78050.1| hypothetical protein VITISV_015862 [Vitis vinifera]
          Length = 1088

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/542 (74%), Positives = 456/542 (84%), Gaps = 26/542 (4%)

Query: 31  RVLSRRTCSSFRKKASVNLFDSRGSSSLKFLSFLNVTCYSICSGDEFCSSSKRRSRGPVM 90
           +VLS+RT SSFR   SV+L   RGSSS+   S L    YS  S D   SSSKRRSRGPVM
Sbjct: 18  QVLSQRTASSFRSMNSVSLLYLRGSSSVHVPSLLKTATYSSYSSDNSSSSSKRRSRGPVM 77

Query: 91  AAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE 150
           AAKKA+E  K+E+GRYKHTVDLPKT FGMRAN+  REPEI KLWDD+QVF RV D+N+G 
Sbjct: 78  AAKKASEAAKQEDGRYKHTVDLPKTAFGMRANSTSREPEIQKLWDDNQVFKRVVDRNNGG 137

Query: 151 NFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQS 210
           NF+LHDGPPYANG+LHMGHALNKILKDIINRYK                          S
Sbjct: 138 NFILHDGPPYANGDLHMGHALNKILKDIINRYK--------------------------S 171

Query: 211 LDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEV 270
           LD+DA+++LTP KLRAKA++FAKATVK QMASFKRYGVW DWNNPYLTLDPEYEA+QIEV
Sbjct: 172 LDQDARRELTPLKLRAKASRFAKATVKNQMASFKRYGVWGDWNNPYLTLDPEYEASQIEV 231

Query: 271 FGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLL 330
           FGQM+LQGYIYRG+KPVHWSPSSRTALAEAELEYPEGH+S+SIYA+FR+VSAP ++   L
Sbjct: 232 FGQMALQGYIYRGRKPVHWSPSSRTALAEAELEYPEGHISKSIYAIFRLVSAPVTSGTSL 291

Query: 331 NEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVL 390
            +FLPDL LA+WTTTPWT+PANAAVAVNAKLQY+VVE+ S LE  S +  N+K R GN L
Sbjct: 292 EDFLPDLCLAIWTTTPWTIPANAAVAVNAKLQYSVVEVHSPLEDVSKSKQNEKGRLGNAL 351

Query: 391 KDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYI 450
           K+QK +F++VASDLVPTLEAKWG KLVIKKTL GSDLENCRY+HP+D R+CPVVIGGDYI
Sbjct: 352 KEQKNLFLVVASDLVPTLEAKWGLKLVIKKTLLGSDLENCRYIHPIDKRECPVVIGGDYI 411

Query: 451 TTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAV 510
           TTESGTGLVHTAPGHGQEDYVT +KYGLPILSPVDD+GKFTEEAG+FSGLDVLGDGN AV
Sbjct: 412 TTESGTGLVHTAPGHGQEDYVTGMKYGLPILSPVDDDGKFTEEAGQFSGLDVLGDGNAAV 471

Query: 511 VKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           V++LDE +S+IMEEPY+HKYPYDWRTKKPTIFRATEQWFASVEGFRQ AM AIGQV W+P
Sbjct: 472 VRFLDENLSIIMEEPYKHKYPYDWRTKKPTIFRATEQWFASVEGFRQVAMTAIGQVTWIP 531

Query: 571 PQ 572
            Q
Sbjct: 532 AQ 533



 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 179/207 (86%), Positives = 190/207 (91%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           +EAPGYGADVLRLWVSSVDYTGD MIG QVLRQMSDIYRKLRGTLRYLL NLHDW+  N+
Sbjct: 744 KEAPGYGADVLRLWVSSVDYTGDAMIGAQVLRQMSDIYRKLRGTLRYLLANLHDWKADNA 803

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + Y DLPMID++ALFQLEN+VKNIRESYESYQFFKIFQIIQRF IVDLSNFYFDVAKDRL
Sbjct: 804 VPYCDLPMIDRHALFQLENVVKNIRESYESYQFFKIFQIIQRFAIVDLSNFYFDVAKDRL 863

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           Y GGTTSFTRRSCQTVL+AHLLSIVRVIAPILPHLAEDVWQNLPF YT EDGS AEFVFE
Sbjct: 864 YVGGTTSFTRRSCQTVLAAHLLSIVRVIAPILPHLAEDVWQNLPFQYTNEDGSIAEFVFE 923

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEV 778
           S+WP L+EKW TFP  EI FWGKILE+
Sbjct: 924 SRWPALNEKWLTFPTEEIDFWGKILEL 950


>gi|115449027|ref|NP_001048293.1| Os02g0778200 [Oryza sativa Japonica Group]
 gi|46805524|dbj|BAD16975.1| putative isoleucyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113537824|dbj|BAF10207.1| Os02g0778200 [Oryza sativa Japonica Group]
 gi|222623772|gb|EEE57904.1| hypothetical protein OsJ_08590 [Oryza sativa Japonica Group]
          Length = 1058

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/495 (73%), Positives = 427/495 (86%), Gaps = 2/495 (0%)

Query: 78  CSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDH 137
            S+SKRRSRGPVMAAKKAAEG K+EEG+YKHTVDLPKTTFG+RAN++VREPE+ KLW+++
Sbjct: 42  ASTSKRRSRGPVMAAKKAAEGAKQEEGKYKHTVDLPKTTFGLRANSVVREPELQKLWEEN 101

Query: 138 QVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWD 197
           QV  RV+++N G  FVLHDGPPYANG+LHMGHALNKILKDIINRYKLLQN+KV ++PGWD
Sbjct: 102 QVLKRVSERNTGATFVLHDGPPYANGDLHMGHALNKILKDIINRYKLLQNHKVSFIPGWD 161

Query: 198 CHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYL 257
           CHGLPIELKVL+SLD++    LTP KLR KAAKFAKATV  QM SFKR+GVWADW+NPYL
Sbjct: 162 CHGLPIELKVLKSLDKETLNALTPIKLRQKAAKFAKATVTTQMNSFKRFGVWADWDNPYL 221

Query: 258 TLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVF 317
           TL PEYEAAQ+EVFGQM ++GYIYRG+KPVHWSPSSRTALAEAELEY E H+S+S+YA F
Sbjct: 222 TLSPEYEAAQLEVFGQMVMKGYIYRGRKPVHWSPSSRTALAEAELEYSENHISKSMYAAF 281

Query: 318 RMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSA 377
           ++ +   S  GLL EFLP+L LA+WTTTPWT+PANAAVAVN +L Y VVE+QS+LE +S 
Sbjct: 282 KITNL--SKPGLLEEFLPNLCLAIWTTTPWTIPANAAVAVNPELTYVVVELQSVLESEST 339

Query: 378 APANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVD 437
           +  N++     +    +K FIIVA+DLV  LE+KWGTKL+I+K+  GS LE+CRY+HPV+
Sbjct: 340 SGGNQRKLGSILSPGSQKPFIIVAADLVSALESKWGTKLIIQKSFPGSALEHCRYIHPVN 399

Query: 438 NRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKF 497
             +C VV+GGDYITTESGTGLVHTAPGHGQEDY+T LKYGLPI+SPVDDEG FT EAG+F
Sbjct: 400 GNECSVVLGGDYITTESGTGLVHTAPGHGQEDYITGLKYGLPIVSPVDDEGNFTAEAGQF 459

Query: 498 SGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQ 557
           SGL VLG GN AVV YLDEQ SLI+EEPY+HKYPYDWR+K+PTIFRATEQWFASV+GFR 
Sbjct: 460 SGLSVLGAGNAAVVNYLDEQCSLILEEPYKHKYPYDWRSKEPTIFRATEQWFASVDGFRN 519

Query: 558 AAMDAIGQVKWVPPQ 572
           AAMDAI +V W+P Q
Sbjct: 520 AAMDAIRRVSWIPSQ 534



 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 148/207 (71%), Positives = 179/207 (86%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           ++ PGYGADVLRLWVSSVDYTGDV++GPQ+LRQMSD+YRKLRGT+R+LL NLHDW+  NS
Sbjct: 713 KQEPGYGADVLRLWVSSVDYTGDVLVGPQILRQMSDMYRKLRGTMRFLLSNLHDWKPENS 772

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + Y DLP ID+YALFQLEN+V ++++SYE+YQF+KI+QI+QRF IVDLSNFY DVAKDRL
Sbjct: 773 VRYSDLPKIDKYALFQLENVVTSMKDSYENYQFYKIYQILQRFAIVDLSNFYLDVAKDRL 832

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           Y GG  SFTR+SCQTVLSAHLL +VR IAPI+PHLAEDVWQNLPF +TL+DGS AEFVF 
Sbjct: 833 YVGGRVSFTRKSCQTVLSAHLLYLVRAIAPIMPHLAEDVWQNLPFQHTLDDGSVAEFVFN 892

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEV 778
            KWPV +E+W + P  ++ F   ILE+
Sbjct: 893 LKWPVKNEEWLSVPKDDVDFLSVILEL 919


>gi|218191678|gb|EEC74105.1| hypothetical protein OsI_09155 [Oryza sativa Indica Group]
          Length = 1058

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/495 (73%), Positives = 427/495 (86%), Gaps = 2/495 (0%)

Query: 78  CSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDH 137
            S+SKRRSRGPVMAAKKAAEG K+EEG+YKHTVDLPKTTFG+RAN++VREPE+ KLW+++
Sbjct: 42  ASTSKRRSRGPVMAAKKAAEGAKQEEGKYKHTVDLPKTTFGLRANSVVREPELQKLWEEN 101

Query: 138 QVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWD 197
           QV  RV+++N G  FVLHDGPPYANG+LHMGHALNKILKDIINRYKLLQN+KV ++PGWD
Sbjct: 102 QVLKRVSERNTGATFVLHDGPPYANGDLHMGHALNKILKDIINRYKLLQNHKVSFIPGWD 161

Query: 198 CHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYL 257
           CHGLPIELKVL+SLD++    LTP KLR KAAKFAKATV  QM SFKR+GVWADW+NPYL
Sbjct: 162 CHGLPIELKVLKSLDKETLNALTPIKLRQKAAKFAKATVTTQMNSFKRFGVWADWDNPYL 221

Query: 258 TLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVF 317
           TL PEYEAAQ+EVFGQM ++GYIYRG+KPVHWSPSSRTALAEAELEY E H+S+S+YA F
Sbjct: 222 TLSPEYEAAQLEVFGQMVMKGYIYRGRKPVHWSPSSRTALAEAELEYSENHISKSMYAAF 281

Query: 318 RMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSA 377
           ++ +   S  GLL EFLP+L LA+WTTTPWT+PANAAVAVN +L Y VVE+QS+LE +S 
Sbjct: 282 KITNL--SKPGLLEEFLPNLCLAIWTTTPWTIPANAAVAVNPELTYVVVELQSVLESEST 339

Query: 378 APANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVD 437
           +  N++     +    +K FIIVA+DLV  LE+KWGTKL+I+K+  GS LE+CRY+HPV+
Sbjct: 340 SGGNQRKLGSILSPGSQKPFIIVAADLVSALESKWGTKLIIQKSFPGSALEHCRYIHPVN 399

Query: 438 NRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKF 497
             +C VV+GGDYITTESGTGLVHTAPGHGQEDY+T LKYGLPI+SPVDDEG FT EAG+F
Sbjct: 400 GNECSVVLGGDYITTESGTGLVHTAPGHGQEDYITGLKYGLPIVSPVDDEGNFTAEAGQF 459

Query: 498 SGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQ 557
           SGL VLG GN AVV YLDEQ SLI+EEPY+HKYPYDWR+K+PTIFRATEQWFASV+GFR 
Sbjct: 460 SGLSVLGAGNAAVVNYLDEQCSLILEEPYKHKYPYDWRSKEPTIFRATEQWFASVDGFRN 519

Query: 558 AAMDAIGQVKWVPPQ 572
           AAMDAI +V W+P Q
Sbjct: 520 AAMDAIRRVSWIPSQ 534



 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 148/207 (71%), Positives = 179/207 (86%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           ++ PGYGADVLRLWVSSVDYTGDV++GPQ+LRQMSD+YRKLRGT+R+LL NLHDW+  NS
Sbjct: 713 KQEPGYGADVLRLWVSSVDYTGDVLVGPQILRQMSDMYRKLRGTMRFLLSNLHDWKPENS 772

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + Y DLP ID+YALFQLEN+V ++++SYE+YQF+KI+QI+QRF IVDLSNFY DVAKDRL
Sbjct: 773 VRYSDLPKIDKYALFQLENVVTSMKDSYENYQFYKIYQILQRFAIVDLSNFYLDVAKDRL 832

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           Y GG  SFTR+SCQTVLSAHLL +VR IAPI+PHLAEDVWQNLPF +TL+DGS AEFVF 
Sbjct: 833 YVGGRVSFTRKSCQTVLSAHLLYLVRAIAPIMPHLAEDVWQNLPFQHTLDDGSVAEFVFN 892

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEV 778
            KWPV +E+W + P  ++ F   ILE+
Sbjct: 893 LKWPVKNEEWLSVPKDDVDFLSVILEL 919


>gi|224107153|ref|XP_002314391.1| predicted protein [Populus trichocarpa]
 gi|222863431|gb|EEF00562.1| predicted protein [Populus trichocarpa]
          Length = 981

 Score =  764 bits (1973), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/457 (82%), Positives = 418/457 (91%), Gaps = 3/457 (0%)

Query: 119 MRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDI 178
           MRANALVREPEI KLW+D+QVF RV DKN+GE+FVLHDGPPYANG LHMGHALNKILKD+
Sbjct: 1   MRANALVREPEIQKLWEDNQVFKRVVDKNEGEHFVLHDGPPYANGELHMGHALNKILKDV 60

Query: 179 INRYKLLQNYKVRYVPGWDCHGLPIELK---VLQSLDEDAKKDLTPSKLRAKAAKFAKAT 235
           INRYK+LQNYKV YVPGWDCHGLPIELK    LQS+D++A+KDLT SKLRAKAAKFAKAT
Sbjct: 61  INRYKILQNYKVHYVPGWDCHGLPIELKGKHFLQSMDQEARKDLTQSKLRAKAAKFAKAT 120

Query: 236 VKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRT 295
           VK QMASFKR+GVW DW  PYLTLDPEYEAAQIEVFGQM+ QGYIYRG+KPVHWSPSSRT
Sbjct: 121 VKTQMASFKRFGVWGDWERPYLTLDPEYEAAQIEVFGQMAFQGYIYRGRKPVHWSPSSRT 180

Query: 296 ALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAV 355
           ALAEAELEYPEGHVS+SIYA+FR+VSAPP++ GLL EF PDL LA+WTTTPWTVPANAAV
Sbjct: 181 ALAEAELEYPEGHVSKSIYAIFRVVSAPPTSDGLLEEFFPDLCLAIWTTTPWTVPANAAV 240

Query: 356 AVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK 415
           AVNAKLQYAV+E+QS     S +  NKK R G+VLK+QKK F+IVASDLVPTLEAKWG K
Sbjct: 241 AVNAKLQYAVIEVQSFSGDASTSSGNKKQRLGHVLKEQKKPFLIVASDLVPTLEAKWGVK 300

Query: 416 LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLK 475
           LV+KKTL GSDLENCRY+HP+D R+CPVVIGGDYITTESGTGLVHTAPGHG+EDYVT LK
Sbjct: 301 LVVKKTLLGSDLENCRYIHPIDKRECPVVIGGDYITTESGTGLVHTAPGHGREDYVTGLK 360

Query: 476 YGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWR 535
           YGLPI+SPVDD+GKFTEEA +FSGLDVLGDGN+AV+KYLDEQM LIMEE Y+H YPYDWR
Sbjct: 361 YGLPIISPVDDDGKFTEEAVQFSGLDVLGDGNIAVMKYLDEQMLLIMEESYQHNYPYDWR 420

Query: 536 TKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           TKKPTIFRATEQWFASVEGFRQ+AM+AI QVKW+PPQ
Sbjct: 421 TKKPTIFRATEQWFASVEGFRQSAMEAISQVKWIPPQ 457



 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 174/207 (84%), Positives = 192/207 (92%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           +EAPGYGADVLRLWVSSVDYTGDVMIG QVLRQ+SDIYRKLRGTLRYLLGNLHDW  GN+
Sbjct: 636 KEAPGYGADVLRLWVSSVDYTGDVMIGTQVLRQISDIYRKLRGTLRYLLGNLHDWEAGNA 695

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           ISY+DLPMID++ALFQLEN+V  IRESY++YQFFKIFQIIQRF+IVDLSNFYFDVAKDRL
Sbjct: 696 ISYNDLPMIDKHALFQLENVVNTIRESYDNYQFFKIFQIIQRFVIVDLSNFYFDVAKDRL 755

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           Y GGTTS TRRSCQTVL+AHLLSI RVIAPILPHLAEDVWQNLPF +T++DGSAA+FVFE
Sbjct: 756 YVGGTTSHTRRSCQTVLAAHLLSIARVIAPILPHLAEDVWQNLPFQFTVQDGSAAKFVFE 815

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEV 778
           SKWP  +EKW  FP+ EI FWGKILE+
Sbjct: 816 SKWPATNEKWLAFPIEEIDFWGKILEL 842


>gi|10177193|dbj|BAB10327.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 988

 Score =  753 bits (1943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/483 (77%), Positives = 422/483 (87%), Gaps = 22/483 (4%)

Query: 90  MAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG 149
           MAAKKA+EGEK+E+G+YK TVDLPKT FGMRAN+L REPE+ KLW+++QVF RV+D N+G
Sbjct: 1   MAAKKASEGEKQEDGKYKQTVDLPKTGFGMRANSLTREPELQKLWEENQVFKRVSDNNNG 60

Query: 150 ENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQ 209
            +F+LHDGPPYANG+LHMGHALNKILKDIINRYKLLQNYKV+YVPGWDCHGLPIELKVLQ
Sbjct: 61  GSFILHDGPPYANGDLHMGHALNKILKDIINRYKLLQNYKVQYVPGWDCHGLPIELKVLQ 120

Query: 210 SLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIE 269
           SLD++ +K+LTP KLRAKAAKFAKATVK QM SFKR+GVWADWNNPYLTLDPEYEAAQIE
Sbjct: 121 SLDQEVRKELTPLKLRAKAAKFAKATVKTQMESFKRFGVWADWNNPYLTLDPEYEAAQIE 180

Query: 270 VFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL 329
           VFGQM+L+GYIYRG+KPVHWSPSSRTALAEAELEYPEGH+S+SIYA+F++V    + + L
Sbjct: 181 VFGQMALKGYIYRGRKPVHWSPSSRTALAEAELEYPEGHISKSIYAIFKLVGG--AKTSL 238

Query: 330 LNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNV 389
           L+EF+P++ LAVWTTTPWT+PANAAVAVNAKLQY+VVE+QS                   
Sbjct: 239 LDEFIPNIYLAVWTTTPWTMPANAAVAVNAKLQYSVVEVQSF------------------ 280

Query: 390 LKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDY 449
             +Q+K+F+IVA+DLVP LEAKWG KL I KT  GSDLENCRY HP+DNR CPVVIGGDY
Sbjct: 281 --NQQKLFVIVATDLVPALEAKWGVKLSISKTFLGSDLENCRYTHPIDNRDCPVVIGGDY 338

Query: 450 ITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVA 509
           ITTESGTGLVHTAPGHGQEDY T LKYGLP++SPVDDEGKFTEEAG+F GL VLG+GN A
Sbjct: 339 ITTESGTGLVHTAPGHGQEDYATGLKYGLPLVSPVDDEGKFTEEAGQFRGLSVLGEGNTA 398

Query: 510 VVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
           VV YLDE MSL+MEE Y HKYPYDWRTKKPTIFRATEQWFASVEGFR A MDAI  VKWV
Sbjct: 399 VVSYLDENMSLVMEESYAHKYPYDWRTKKPTIFRATEQWFASVEGFRTATMDAINNVKWV 458

Query: 570 PPQ 572
           P Q
Sbjct: 459 PHQ 461



 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 166/207 (80%), Positives = 190/207 (91%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           ++AP YGADV+RLWVSSVDYTGDV+IGPQ+LRQMSDIYRKLRGTLRYLLGNLHDWRV N+
Sbjct: 640 KDAPAYGADVMRLWVSSVDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDNA 699

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + Y DLP+IDQ+ALFQLEN+VKNI+E YE+YQFFKIFQIIQRF IVDLSNFYFD+AKDRL
Sbjct: 700 VPYQDLPIIDQHALFQLENVVKNIQECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRL 759

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           YTGGT+SFTRRSCQTVLS HLLSI+RVIAPI+PHLAEDVWQNLPF Y  EDGSAAEFVFE
Sbjct: 760 YTGGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLPFEYRNEDGSAAEFVFE 819

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEV 778
            KWP L+E+W +FP  ++ FW ++LE+
Sbjct: 820 LKWPTLNEQWLSFPAEDVLFWQRLLEL 846


>gi|242063240|ref|XP_002452909.1| hypothetical protein SORBIDRAFT_04g034870 [Sorghum bicolor]
 gi|241932740|gb|EES05885.1| hypothetical protein SORBIDRAFT_04g034870 [Sorghum bicolor]
          Length = 839

 Score =  750 bits (1936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/473 (73%), Positives = 409/473 (86%), Gaps = 4/473 (0%)

Query: 101 KEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           +E+G+YKHTVDLPKTTFG+RAN++ REPE+ KLWD++QV  RV+++N G  FVLHDGPPY
Sbjct: 12  QEDGKYKHTVDLPKTTFGLRANSVQREPELQKLWDENQVLKRVSERNTGPAFVLHDGPPY 71

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+LHMGHALNKILKD INRYKLLQN+KV +VPGWDCHGLPIELKVL+S+D++    LT
Sbjct: 72  ANGDLHMGHALNKILKDFINRYKLLQNHKVSFVPGWDCHGLPIELKVLKSMDKETLSALT 131

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
           P KLR KAAKFAKATV AQM SFKRYGVWADW+NPYLTL PEYEAAQ+EVFGQM ++GYI
Sbjct: 132 PIKLRQKAAKFAKATVDAQMKSFKRYGVWADWDNPYLTLSPEYEAAQLEVFGQMVMKGYI 191

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YRG+KPVHWSPSSRTALAEAELEY E H+SRSIYA F++ +  PS SG+L+EFLP++ LA
Sbjct: 192 YRGRKPVHWSPSSRTALAEAELEYSENHISRSIYAAFKITN--PSKSGMLDEFLPNVSLA 249

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQK-KVFII 399
           +WTTTPWT+PANAAVAVN +L YAV E+QS+ E +S +   K+ + GN+L  +K K+F+I
Sbjct: 250 IWTTTPWTIPANAAVAVNPELTYAVAEVQSVFESESTS-GGKQRKVGNILSSEKGKLFVI 308

Query: 400 VASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           VASDLV TLE+KWG KL + K+  GS LE+CRY HPV+  +C VV+GGDYITTESGTGLV
Sbjct: 309 VASDLVTTLESKWGVKLAVHKSFPGSALEHCRYAHPVNGNECFVVLGGDYITTESGTGLV 368

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHGQEDY+T LKYGLPI+SPVDDEG FT EAG+FSGL VLG GN AVVKYLDEQ S
Sbjct: 369 HTAPGHGQEDYITGLKYGLPIISPVDDEGNFTAEAGRFSGLSVLGAGNTAVVKYLDEQYS 428

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           LI+EEPY+HKYPYDWR+K+PTIFRATEQWFASV+ FR AAMDAI +V WVP Q
Sbjct: 429 LILEEPYKHKYPYDWRSKEPTIFRATEQWFASVDDFRNAAMDAIRRVTWVPSQ 481



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 120/165 (72%), Positives = 146/165 (88%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           +E PGYGADVLRLWVSSVDY+ DV+IGPQ+LRQMSD+YRKLRGT+R+LL NLHDW+  NS
Sbjct: 660 REEPGYGADVLRLWVSSVDYSTDVLIGPQILRQMSDMYRKLRGTMRFLLSNLHDWKPDNS 719

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + Y+DLP ID+YALFQLE ++ ++++SYESYQF+K++Q++QRF  V LSNFY DVAKDRL
Sbjct: 720 VPYNDLPKIDKYALFQLETVMASMKDSYESYQFYKVYQMLQRFATVGLSNFYLDVAKDRL 779

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           Y GG  SFTR+SCQTVL AHLL +VR I+PI+PHLAEDVWQNLPF
Sbjct: 780 YVGGRVSFTRKSCQTVLMAHLLYLVRAISPIMPHLAEDVWQNLPF 824


>gi|357137856|ref|XP_003570515.1| PREDICTED: isoleucyl-tRNA synthetase-like [Brachypodium distachyon]
          Length = 1061

 Score =  749 bits (1934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/487 (73%), Positives = 425/487 (87%), Gaps = 4/487 (0%)

Query: 87  GPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADK 146
           GPVMAAKKAA+G K+E+G+YKHTVDLPKTTFG+RAN+++REPE+ KLW+++QV  RV+++
Sbjct: 52  GPVMAAKKAAQGAKQEDGKYKHTVDLPKTTFGLRANSVMREPELQKLWEENQVLKRVSER 111

Query: 147 NDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELK 206
           N G  F LHDGPPYANG+LHMGHALNK+LKDIINRYKLLQN+KV +VPGWDCHGLPIELK
Sbjct: 112 NTGAAFSLHDGPPYANGDLHMGHALNKVLKDIINRYKLLQNHKVSFVPGWDCHGLPIELK 171

Query: 207 VLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAA 266
           VL+S+D++    LTP KLR KAAKFAKATV AQM SFKR G+WADW+NPYLTL PEYEAA
Sbjct: 172 VLKSMDKETLNALTPIKLRQKAAKFAKATVNAQMNSFKRIGIWADWDNPYLTLSPEYEAA 231

Query: 267 QIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPST 326
           Q+EVFGQM ++GYIYRG+KPVHWSPSSRTALAEAELEY E HVS+SIYA F++ S  PS 
Sbjct: 232 QLEVFGQMVMRGYIYRGRKPVHWSPSSRTALAEAELEYSENHVSKSIYAAFKITS--PSK 289

Query: 327 SGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRP 386
           SGLL+EFLP++ LA+WTTTPWT+PANAAVAVN +L YAVVE+QS+LE +S +   K+ + 
Sbjct: 290 SGLLDEFLPNVCLAIWTTTPWTIPANAAVAVNPELTYAVVELQSVLESESTS-GGKQRKL 348

Query: 387 GNVLKD-QKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVI 445
           G++L    +K F+IVASDLV  LE+KWG KLVI+K+  GS LE+CRY+HPV+  +C VVI
Sbjct: 349 GSILSSGNEKPFVIVASDLVSVLESKWGMKLVIRKSFPGSVLEHCRYIHPVNGDECSVVI 408

Query: 446 GGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGD 505
           GGDYITTESGTGLVHTAPGHGQEDY+T LKYGLPI+SPVDDEG FT EAG+F+GL VLG 
Sbjct: 409 GGDYITTESGTGLVHTAPGHGQEDYITGLKYGLPIVSPVDDEGNFTAEAGQFNGLSVLGA 468

Query: 506 GNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQ 565
           GN AVVKYLDE +SLI+EEPY+HKYPYDWR+K+PTIFRATEQWFASV+GFR AA+DAI +
Sbjct: 469 GNAAVVKYLDEHVSLILEEPYKHKYPYDWRSKEPTIFRATEQWFASVDGFRDAALDAIKR 528

Query: 566 VKWVPPQ 572
           V WVP Q
Sbjct: 529 VTWVPSQ 535



 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 143/207 (69%), Positives = 176/207 (85%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           +E PGYGADVLRLWVSSVDYTGDV+IGPQ+LRQMSD+YRKLRGT+R+LL NLHDW+  NS
Sbjct: 714 KEEPGYGADVLRLWVSSVDYTGDVLIGPQILRQMSDMYRKLRGTMRFLLSNLHDWKPENS 773

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + Y DLP IDQYALFQLEN+V ++++SY++YQF+KI+Q +QRF IV LSNFYFDVAKDRL
Sbjct: 774 VPYSDLPKIDQYALFQLENVVASMKDSYDNYQFYKIYQTLQRFAIVGLSNFYFDVAKDRL 833

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           Y GG  S+TR+SCQTVL+AHLL +VR IAPI+PHLAEDVWQNLPF +TLEDGS A+F F+
Sbjct: 834 YVGGRVSYTRKSCQTVLAAHLLYLVRAIAPIMPHLAEDVWQNLPFEHTLEDGSVAKFAFD 893

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEV 778
            KWP  +E+W +    ++ F   +LE+
Sbjct: 894 LKWPNKNEEWLSVQKDDVDFLSIVLEL 920


>gi|326505354|dbj|BAK03064.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1064

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/487 (72%), Positives = 422/487 (86%), Gaps = 4/487 (0%)

Query: 87  GPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADK 146
           GPVMAAKKAAEG K+E+G+YKHTVDLPKT+FG+RAN+++REPE+ KLW+++QV  RV+++
Sbjct: 53  GPVMAAKKAAEGAKQEDGKYKHTVDLPKTSFGLRANSVMREPELQKLWEENQVLKRVSER 112

Query: 147 NDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELK 206
           N G  F LHDGPPYANG+LHMGHALNK+LKDIINRYKLLQN+KV ++PGWDCHGLPIELK
Sbjct: 113 NTGATFTLHDGPPYANGDLHMGHALNKVLKDIINRYKLLQNHKVSFIPGWDCHGLPIELK 172

Query: 207 VLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAA 266
           VL+S+D+     LTP KLR KAAKFAKATV AQM SF+R G+WADW+NPYLTL PEYEAA
Sbjct: 173 VLKSMDKATLDALTPIKLRQKAAKFAKATVNAQMNSFERIGIWADWDNPYLTLSPEYEAA 232

Query: 267 QIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPST 326
           Q+EVFGQM ++GYIYRG+KPVHWSPSSRTALAEAELEY E HVS+SIYA F++ +  PS 
Sbjct: 233 QLEVFGQMVMRGYIYRGRKPVHWSPSSRTALAEAELEYSENHVSKSIYAAFKITN--PSN 290

Query: 327 SGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRP 386
           SGLL+EFLP++ LA+WTTTPWT+PANAAVAVN +L YAVVE+Q +LE +S +   K+ + 
Sbjct: 291 SGLLDEFLPNVCLAIWTTTPWTIPANAAVAVNPELSYAVVELQPVLESESTS-GGKQRKL 349

Query: 387 GNVLKD-QKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVI 445
           G++     +K FIIVASDLV  LE+KWG KLVI+K+  GS LE+CRY+HPV+  +C VVI
Sbjct: 350 GSIFSSGNEKPFIIVASDLVSVLESKWGVKLVIRKSFPGSVLEHCRYLHPVNGNECSVVI 409

Query: 446 GGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGD 505
           GGDYITTESGTGLVHTAPGHGQEDY+T LKYGLPI+SPVDDEG FT EAG+FSGL VLG 
Sbjct: 410 GGDYITTESGTGLVHTAPGHGQEDYLTGLKYGLPIVSPVDDEGNFTAEAGQFSGLSVLGA 469

Query: 506 GNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQ 565
           GN AVVKYLDE +SLI+EEPY+HKYPYDWR+K+PTIFRATEQWFASV+GFR AA+DAI +
Sbjct: 470 GNAAVVKYLDEHVSLILEEPYKHKYPYDWRSKEPTIFRATEQWFASVDGFRDAALDAIKR 529

Query: 566 VKWVPPQ 572
           V WVP Q
Sbjct: 530 VTWVPSQ 536



 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 142/207 (68%), Positives = 173/207 (83%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           +E P YGADVLRLWVSSVDYTGDV+IG Q+LRQMSD+YRKLRGT+R+LL NLHDW+  NS
Sbjct: 715 KEEPPYGADVLRLWVSSVDYTGDVLIGSQILRQMSDMYRKLRGTMRFLLANLHDWKPENS 774

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + Y DLP IDQYALFQLEN+V ++++SY+ YQF+KI+Q +QRF IV LSNFYFDVAKDRL
Sbjct: 775 VPYSDLPKIDQYALFQLENVVASMKDSYDHYQFYKIYQTLQRFAIVGLSNFYFDVAKDRL 834

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           Y GG  S+TR+SCQTVL+AHLL +VR IAPI+PHLAED+WQNLPF +TLEDGS AEF F+
Sbjct: 835 YVGGRVSYTRKSCQTVLAAHLLYLVRAIAPIMPHLAEDIWQNLPFQHTLEDGSVAEFAFD 894

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEV 778
            KWP  +E+W +    ++ F   ILE+
Sbjct: 895 LKWPDRNEEWCSVQKDDVDFLSVILEL 921


>gi|168008836|ref|XP_001757112.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691610|gb|EDQ77971.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1002

 Score =  678 bits (1749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/475 (67%), Positives = 374/475 (78%), Gaps = 17/475 (3%)

Query: 96  AEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLH 155
            EG  ++ G+YK TVDLP+T+FGM+ANA+ REPEI KLW++ Q+  R+ ++N GE F LH
Sbjct: 9   GEGGSQDGGQYKDTVDLPQTSFGMKANAVQREPEIQKLWEERQILQRMMERNTGEIFTLH 68

Query: 156 DGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA 215
           DGPPYANG LHMGHALNKILKD INRY+LLQ  KV YVPGWDCHGLPIELKVLQS+D +A
Sbjct: 69  DGPPYANGELHMGHALNKILKDFINRYQLLQGRKVYYVPGWDCHGLPIELKVLQSMDAEA 128

Query: 216 KKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMS 275
           +K+LTP KLR KAA+FA+ TV  Q  SFKR+GVW DW NPYLTL P+YEAAQI VFG+M 
Sbjct: 129 RKELTPIKLRKKAAQFAQKTVNEQRKSFKRFGVWGDWENPYLTLSPDYEAAQIGVFGKMF 188

Query: 276 LQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP 335
           L G+IYRG+KPVHWSPSS TALAEAELEYPEGH S+SIY VF+M+    +    L   LP
Sbjct: 189 LNGHIYRGRKPVHWSPSSGTALAEAELEYPEGHTSKSIYVVFKMIELSDNFPESLKPLLP 248

Query: 336 DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
            +G+A+WTTTPWT+PANAAVAVN KL YAVVEI+                 G+ L D + 
Sbjct: 249 SMGVAIWTTTPWTIPANAAVAVNDKLTYAVVEIK-----------------GSALLDPQV 291

Query: 396 VFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESG 455
             +IVA+DLVP LEAKWG  L +K T  GS LE+ RY HP++ R+ PVV+GGDYITTESG
Sbjct: 292 KHVIVAADLVPALEAKWGVSLEVKGTFPGSALEHSRYRHPLEERENPVVVGGDYITTESG 351

Query: 456 TGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLD 515
           TGLVHTAPGHGQEDY+T LKYGLP+LSPVDD G FT EAG+FSGL+VLG+GN +VV  LD
Sbjct: 352 TGLVHTAPGHGQEDYITGLKYGLPLLSPVDDNGNFTSEAGQFSGLNVLGEGNSSVVTALD 411

Query: 516 EQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               L+MEE Y HKYPYDWRTKKPTIFRATEQWFASVEGFRQ A++AI  V+WVP
Sbjct: 412 SHSVLLMEEAYVHKYPYDWRTKKPTIFRATEQWFASVEGFRQTALEAIRSVQWVP 466



 Score =  303 bits (775), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 134/205 (65%), Positives = 170/205 (82%), Gaps = 1/205 (0%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           PGYGADVLRLWVSSVDYTGDVMIGPQ++RQMS+IYRKLRGTLRYLL NLHDW+   +S++
Sbjct: 650 PGYGADVLRLWVSSVDYTGDVMIGPQIVRQMSEIYRKLRGTLRYLLSNLHDWKPEEHSVA 709

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
           Y+DLP +DQYALFQL ++V  I +SY  YQF++ FQ++QRFI+VDLSNFYFD AKDRLYT
Sbjct: 710 YEDLPKLDQYALFQLASVVDGIEDSYNKYQFYRFFQLMQRFIVVDLSNFYFDTAKDRLYT 769

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
           GG  S+TRRSCQ+VL+A LL +VR IAP+LPH+AED W +LPF++ L++GS AE VFE+ 
Sbjct: 770 GGRESYTRRSCQSVLAAQLLCLVRAIAPVLPHMAEDAWSHLPFSFHLDNGSLAETVFEAA 829

Query: 754 WPVLDEKWRTFPVGEIYFWGKILEV 778
           WP +D +W +    ++  W  +L+V
Sbjct: 830 WPKVDARWLSVSEEDLSLWSALLQV 854


>gi|427731408|ref|YP_007077645.1| isoleucyl-tRNA synthetase [Nostoc sp. PCC 7524]
 gi|427367327|gb|AFY50048.1| Isoleucyl-tRNA synthetase [Nostoc sp. PCC 7524]
          Length = 1097

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/471 (65%), Positives = 362/471 (76%), Gaps = 16/471 (3%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LPKT F MRANA+ REPEI K W+D+++F  ++  N GE F+LHDGPPYA
Sbjct: 3   EPGSYKDTVNLPKTNFDMRANAIKREPEIQKFWEDNKIFESLSQNNPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRY+LLQ  KVRYVPGWDCHGLPIELKVLQ+L    +++LTP
Sbjct: 63  NGSLHIGHALNKILKDIINRYQLLQGRKVRYVPGWDCHGLPIELKVLQNLKSAERQNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA +FA ATV  Q  SFKRYGVW DW+NPYLTL PEYEAAQI VFGQM L+GYIY
Sbjct: 123 LQLRQKAKEFALATVDDQRKSFKRYGVWGDWDNPYLTLKPEYEAAQIGVFGQMYLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSIYA F +     +   +L E+LPDLG+AV
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFPVTGLAEAVKSVLGEYLPDLGVAV 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVAVN  L Y++VE+               SR G   + + K ++IVA
Sbjct: 243 WTTTPWTIPGNLAVAVNGDLNYSLVEV---------------SRKGAETQSKFK-YLIVA 286

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++LV  L      +L +K T  G DLE+  Y HP+ +R+ PVV+GGDYITTESGTGLVHT
Sbjct: 287 AELVERLATTISAELTVKATFKGQDLEHTTYRHPLFDRESPVVVGGDYITTESGTGLVHT 346

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+  L+YGLPIL+PVDD G FTEEAG+F+GL+VLGDGN AV+  L +  SL+
Sbjct: 347 APGHGQEDYIVGLRYGLPILAPVDDNGNFTEEAGQFAGLNVLGDGNQAVIDALTDAGSLL 406

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y HKYPYDWRTKKPTIFRATEQWFASV GFR+ A+ AI  VKW+P Q
Sbjct: 407 KEEAYAHKYPYDWRTKKPTIFRATEQWFASVAGFREEALKAIASVKWIPAQ 457



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 95/202 (47%), Positives = 140/202 (69%), Gaps = 9/202 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDYT DV +G  +++Q++D+  K+R T R+LLG+LHD+    +
Sbjct: 636 KKEPPYGADVLRLWVSSVDYTADVRLGSNIIKQLNDVRGKIRNTARFLLGSLHDFDPEKD 695

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++ +++LP +D+Y L ++  + + + E++ES+QFF+ FQ +Q F +VDLSNFY DVAKDR
Sbjct: 696 AVPFEELPQLDKYMLHRIREVFQEVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDVAKDR 755

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTV+   L ++ R IAP+L H AED+WQ LP+       +  + VF
Sbjct: 756 LYISAPNSFRRRSCQTVIHIALENLARAIAPVLCHTAEDIWQYLPYK------TPYKSVF 809

Query: 751 ESKWPVLDEKWRTFPVGEIYFW 772
           ++ W  L++KW    +GE  FW
Sbjct: 810 QAGWVKLEDKWHNPDLGE--FW 829


>gi|376004426|ref|ZP_09782129.1| Isoleucyl-tRNA synthetase [Arthrospira sp. PCC 8005]
 gi|375327191|emb|CCE17882.1| Isoleucyl-tRNA synthetase [Arthrospira sp. PCC 8005]
          Length = 964

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/471 (64%), Positives = 364/471 (77%), Gaps = 17/471 (3%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E+  YK TV+LPKT F MRANA+ REPE+ K W D+Q++ R+ + N G+ F++HDGPPYA
Sbjct: 3   EKNAYKDTVNLPKTKFDMRANAVKREPELQKFWADNQIYDRLCENNPGDRFIIHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LH+GHALNKILKDIINRY+ LQ  KVRYVPGWDCHGLPIELKVLQ + +  ++ LTP
Sbjct: 63  NGQLHIGHALNKILKDIINRYQTLQGQKVRYVPGWDCHGLPIELKVLQQMKQSEREQLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
             LR KA  FA  TV+ Q   F+RYGVW DW NPYLTL PEYEAAQI VFG M L+GYIY
Sbjct: 123 LTLREKARDFALKTVEEQKTQFQRYGVWGDWENPYLTLTPEYEAAQIAVFGVMVLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSIYA FR+ S   S   LL+ +LPDLG+A+
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFRITSLAESVRELLSPYLPDLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVA+N +L YAVVE Q    GDS +P   K             +++VA
Sbjct: 243 WTTTPWTIPGNLAVALNPELTYAVVETQ----GDSESPIEFK-------------YLLVA 285

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++LV  L A + T L +K T+ G+ LENC Y HP+ +R+ P++IGGDY+TTESGTGLVHT
Sbjct: 286 AELVERLSATFNTNLTVKATVKGALLENCTYKHPLFDRESPILIGGDYVTTESGTGLVHT 345

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPILSPVD+ G FTEEAG+F+GL+VL D N A+++ L E  SLI
Sbjct: 346 APGHGQEDYIVGQRYGLPILSPVDENGDFTEEAGEFAGLNVLKDANGAIIEALQEAGSLI 405

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A++AI QV+W+P Q
Sbjct: 406 KEEPYQHKYPYDWRTKKPTIFRATEQWFASVEGFREQALEAIKQVQWIPSQ 456



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 107/217 (49%), Positives = 150/217 (69%), Gaps = 9/217 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           Q+ P YGAD+LRLWVSSVDY+ DV +G  +L+QMSD+YRK+R T R+LLGNLHD+    +
Sbjct: 635 QQDPAYGADILRLWVSSVDYSADVPLGKNILKQMSDVYRKIRNTARFLLGNLHDFDPAKD 694

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I+Y+DLP +D+Y L ++  +   + +++E+YQFF+ FQ++Q F +VDLSNFY D+AKDR
Sbjct: 695 AIAYEDLPELDRYMLHRMTEVFAEVTDAFETYQFFRFFQVVQNFCVVDLSNFYLDIAKDR 754

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY      F RRSCQTVL+  L ++ + IAP+L H AED+WQNLP++      +    VF
Sbjct: 755 LYISAENGFRRRSCQTVLAIALENLAKAIAPVLCHTAEDIWQNLPYS------TPYLSVF 808

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNE 787
           ES W  LDE W+   + E  FW K+ E+   V  + E
Sbjct: 809 ESGWVRLDETWKKPELAE--FWVKLREIRAEVNQVME 843


>gi|423065828|ref|ZP_17054618.1| isoleucyl-tRNA synthetase [Arthrospira platensis C1]
 gi|406712586|gb|EKD07770.1| isoleucyl-tRNA synthetase [Arthrospira platensis C1]
          Length = 964

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/471 (64%), Positives = 364/471 (77%), Gaps = 17/471 (3%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E+  YK TV+LPKT F MRANA+ REPE+ K W D+Q++ R+ + N G+ F++HDGPPYA
Sbjct: 3   EKNAYKDTVNLPKTKFDMRANAVKREPELQKFWADNQIYDRLCENNPGDRFIIHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LH+GHALNKILKDIINRY+ LQ  KVRYVPGWDCHGLPIELKVLQ + +  ++ LTP
Sbjct: 63  NGQLHIGHALNKILKDIINRYQTLQGQKVRYVPGWDCHGLPIELKVLQQMKQSEREQLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
             LR KA  FA  TV+ Q   F+RYGVW DW NPYLTL PEYEAAQI VFG M L+GYIY
Sbjct: 123 LTLREKARDFALKTVEEQKTQFQRYGVWGDWENPYLTLTPEYEAAQIAVFGVMVLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSIYA FR+ S   S   LL+ +LPDLG+A+
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFRITSLAESVRELLSPYLPDLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVA+N +L YAVVE Q    GDS +P   K             +++VA
Sbjct: 243 WTTTPWTIPGNLAVALNPELTYAVVETQ----GDSESPIEFK-------------YLLVA 285

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++LV  L A + T L +K T+ G+ LENC Y HP+ +R+ P++IGGDY+TTESGTGLVHT
Sbjct: 286 AELVERLSATFHTNLTVKATVKGALLENCTYKHPLFDRESPILIGGDYVTTESGTGLVHT 345

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPILSPVD+ G FTEEAG+F+GL+VL D N A+++ L E  SLI
Sbjct: 346 APGHGQEDYIVGQRYGLPILSPVDENGDFTEEAGEFAGLNVLKDANGAIIEALQEAGSLI 405

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A++AI QV+W+P Q
Sbjct: 406 KEEPYQHKYPYDWRTKKPTIFRATEQWFASVEGFREQALEAIKQVQWIPSQ 456



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 106/217 (48%), Positives = 150/217 (69%), Gaps = 9/217 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           Q+ P YGAD+LRLWVSSVDY+ DV +G  +L+QMSD+YRK+R T R+LLGNLHD+    +
Sbjct: 635 QQDPAYGADILRLWVSSVDYSADVPLGKNILKQMSDVYRKIRNTARFLLGNLHDFDPAKD 694

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I+Y+DLP +D+Y L ++  +   + +++E+YQFF+ FQ++Q F +VDLSNFY D+AKDR
Sbjct: 695 AIAYEDLPELDRYMLHRMTEVFAEVTDAFETYQFFRFFQVVQNFCVVDLSNFYLDIAKDR 754

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY      F RRSCQTVL+  L ++ + IAP+L H AED+WQN+P++      +    VF
Sbjct: 755 LYISAENGFRRRSCQTVLAIALENLAKAIAPVLCHTAEDIWQNIPYS------TPYLSVF 808

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNE 787
           ES W  LDE W+   + E  FW K+ E+   V  + E
Sbjct: 809 ESGWVRLDEAWKKPELAE--FWVKLREIRAEVNQVME 843


>gi|428300822|ref|YP_007139128.1| isoleucyl-tRNA synthetase [Calothrix sp. PCC 6303]
 gi|428237366|gb|AFZ03156.1| Isoleucyl-tRNA synthetase [Calothrix sp. PCC 6303]
          Length = 964

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/471 (64%), Positives = 369/471 (78%), Gaps = 12/471 (2%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LPKT F MRANA+ REPEI + W +++++ R++ +N G+ F+LHDGPPYA
Sbjct: 3   EAKSYKDTVNLPKTKFDMRANAVKREPEIQRFWAENKIYARLSQENPGDVFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRY+L+Q  KVRYVPGWDCHGLPIELKVLQ++ +  +++LTP
Sbjct: 63  NGSLHIGHALNKILKDIINRYQLMQGRKVRYVPGWDCHGLPIELKVLQNMKQAERQELTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            KLR KA +FA   V+ Q   FKRYGVW DW +PYLTL PEYEAAQI+VFGQM L+GYIY
Sbjct: 123 LKLRQKAHEFALEAVEGQRKGFKRYGVWGDWEHPYLTLTPEYEAAQIDVFGQMFLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPV+WSPSSRTALAEAELEYPEGH SRS+YA F MVS        L E+LP LG+A+
Sbjct: 183 RGLKPVNWSPSSRTALAEAELEYPEGHTSRSMYAAFPMVSLADGAKSALGEYLPSLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN AVAVN  L Y+VVE+     G  A+ A+ +    NV       ++IVA
Sbjct: 243 WTTTPWTIPANLAVAVNPDLDYSVVEV-----GQVASNADTQ---WNV----SSKYLIVA 290

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            DL+ +L  K+  +L +K T+ G DLE+  Y HP+  R+ P+VIGGDYITTESGTGLVHT
Sbjct: 291 KDLIDSLAEKFNVELTVKTTVKGKDLEHSTYKHPLFERESPIVIGGDYITTESGTGLVHT 350

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+T  KYGLPILSPVDD G FTEEAG+F+GL+VLGDGN AV+  +    +L+
Sbjct: 351 APGHGQEDYITGQKYGLPILSPVDDGGNFTEEAGQFAGLNVLGDGNQAVLDAMLAAGALL 410

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY+HKYPYDWRTKKPTIFRATEQWFASVEGFR  A+DAI QV+W+PPQ
Sbjct: 411 KEEPYQHKYPYDWRTKKPTIFRATEQWFASVEGFRDRALDAIAQVRWIPPQ 461



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/208 (49%), Positives = 136/208 (65%), Gaps = 9/208 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           +E P YGADVLRLWVSSVDYT D  IG  VL+Q+ DI  K+R T R LLGNLHD+    +
Sbjct: 641 KEEPPYGADVLRLWVSSVDYTNDQRIGKNVLKQLGDIRGKIRNTARVLLGNLHDFDPEKD 700

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++ YD LP +D+Y L ++  +   + E++ES+QFF+ FQ +Q F +VDLS+FY D+AKDR
Sbjct: 701 AVPYDKLPAVDKYMLHRMTEVFNEVTEAFESFQFFRFFQTVQNFCVVDLSSFYIDIAKDR 760

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY      F RRS QTVL   L ++ R IAP+L HLAED+WQ LP+       +  + VF
Sbjct: 761 LYISTPEGFRRRSTQTVLYLALENLTRAIAPVLCHLAEDIWQFLPYK------TPYKSVF 814

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           E+ W  LD KW+   +    FW K+ E+
Sbjct: 815 EAGWVNLDAKWQNPEIAT--FWEKLREL 840


>gi|209523554|ref|ZP_03272108.1| isoleucyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209495959|gb|EDZ96260.1| isoleucyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 697

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/471 (64%), Positives = 364/471 (77%), Gaps = 17/471 (3%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E+  YK TV+LPKT F MRANA+ REPE+ K W D+Q++ R+ + N G+ F++HDGPPYA
Sbjct: 3   EKNAYKDTVNLPKTKFDMRANAVKREPELQKFWADNQIYDRLCENNPGDRFIIHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LH+GHALNKILKDIINRY+ LQ  KVRYVPGWDCHGLPIELKVLQ + +  ++ LTP
Sbjct: 63  NGQLHIGHALNKILKDIINRYQTLQGQKVRYVPGWDCHGLPIELKVLQQMKQSEREQLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
             LR KA  FA  TV+ Q   F+RYGVW DW NPYLTL PEYEAAQI VFG M L+GYIY
Sbjct: 123 LTLREKARDFALKTVEEQKTQFQRYGVWGDWENPYLTLTPEYEAAQIAVFGVMVLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSIYA FR+ S   S   LL+ +LPDLG+A+
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFRITSLAESVRELLSPYLPDLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVA+N +L YAVVE Q    GDS +P   K             +++VA
Sbjct: 243 WTTTPWTIPGNLAVALNPELTYAVVETQ----GDSESPIEFK-------------YLLVA 285

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++LV  L A + T L +K T+ G+ LENC Y HP+ +R+ P++IGGDY+TTESGTGLVHT
Sbjct: 286 AELVERLSATFHTNLTVKATVKGALLENCTYKHPLFDRESPILIGGDYVTTESGTGLVHT 345

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPILSPVD+ G FTEEAG+F+GL+VL D N A+++ L E  SLI
Sbjct: 346 APGHGQEDYIVGQRYGLPILSPVDENGDFTEEAGEFAGLNVLKDANGAIIEALQEAGSLI 405

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A++AI QV+W+P Q
Sbjct: 406 KEEPYQHKYPYDWRTKKPTIFRATEQWFASVEGFREQALEAIKQVQWIPSQ 456



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 47/55 (85%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW 626
           Q+ P YGAD+LRLWVSSVDY+ DV +G  +L+QMSD+YRK+R T R+LLGNLHD+
Sbjct: 635 QQDPAYGADILRLWVSSVDYSADVPLGKNILKQMSDVYRKIRNTARFLLGNLHDF 689


>gi|409994105|ref|ZP_11277225.1| isoleucyl-tRNA ligase [Arthrospira platensis str. Paraca]
 gi|291570477|dbj|BAI92749.1| isoleucyl-tRNA synthetase [Arthrospira platensis NIES-39]
 gi|409935018|gb|EKN76562.1| isoleucyl-tRNA ligase [Arthrospira platensis str. Paraca]
          Length = 964

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/471 (63%), Positives = 362/471 (76%), Gaps = 17/471 (3%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E+  YK TV+LPKT F MRANA+ REPE+ K W D+Q++ R+ + N G+ FV+HDGPPYA
Sbjct: 3   EKNAYKDTVNLPKTKFDMRANAVKREPELQKFWADNQIYDRLCENNPGDRFVIHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LH+GHALNKILKDIINRY+ LQ  KVRYVPGWDCHGLPIELKVLQ + +  ++ LTP
Sbjct: 63  NGQLHIGHALNKILKDIINRYQTLQGQKVRYVPGWDCHGLPIELKVLQQMKQSEREQLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
             LR KA  FA  TV+ Q   F+RYGVW DW+NPYLTL PEYEAAQI VF QM L+GYIY
Sbjct: 123 MTLREKARDFALKTVEEQKTQFQRYGVWGDWDNPYLTLTPEYEAAQIAVFAQMVLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSIYA FR+ S   S   LL+ +LPDLG+A+
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFRITSLAESVRELLSPYLPDLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AV++N +L Y+VVE Q    GDS +    K             +++VA
Sbjct: 243 WTTTPWTIPGNLAVSLNPELTYSVVETQ----GDSESSIEFK-------------YLLVA 285

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++LV  L A + T L +K T+ G  LENC Y HP+ +R+  ++IGGDY+TTESGTGLVHT
Sbjct: 286 AELVERLSATFETNLTVKATVKGELLENCTYKHPLFDRESRILIGGDYVTTESGTGLVHT 345

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPILSPVD+ G FTEEAG+F+GL+VL D N A+++ L E  SLI
Sbjct: 346 APGHGQEDYIVGQRYGLPILSPVDENGDFTEEAGEFAGLNVLKDANSAIIEALQEAGSLI 405

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY+HKYPYDWRTKKPTIFRATEQWFASVEGFR  A++AI QV+W+PPQ
Sbjct: 406 KEEPYQHKYPYDWRTKKPTIFRATEQWFASVEGFRSQALEAIKQVQWIPPQ 456



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 106/217 (48%), Positives = 149/217 (68%), Gaps = 9/217 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           Q+ P YGAD+LRLWVSSVDY+ DV +G  +L+QMSD+YRK+R T R+LLGNLHD+    +
Sbjct: 635 QQEPAYGADILRLWVSSVDYSADVPLGKNILKQMSDVYRKIRNTARFLLGNLHDFDPAKD 694

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I+Y DLP +D+Y L ++  +   +++++E+YQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 695 AIAYQDLPELDRYMLHRMTEVFAEVKDAFETYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 754

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY      F RRSCQTVL+  L ++ + IAP+L H AED+WQN+P++      +    VF
Sbjct: 755 LYISAENGFRRRSCQTVLAIALENLAKAIAPVLCHTAEDIWQNMPYS------TPYLSVF 808

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNE 787
           ES W  LDE W+   + E  FW K+ E+   V  + E
Sbjct: 809 ESGWVRLDETWKKPELAE--FWVKLREIRAEVNQVME 843


>gi|75909978|ref|YP_324274.1| isoleucyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|75703703|gb|ABA23379.1| Isoleucyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 978

 Score =  641 bits (1654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/471 (64%), Positives = 362/471 (76%), Gaps = 16/471 (3%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LPKT F MRANA+ REPEI K W+++++F R++  N GE F+LHDGPPYA
Sbjct: 21  ETGSYKDTVNLPKTNFDMRANAIKREPEIQKFWEENKIFERLSQNNPGELFILHDGPPYA 80

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRY+LLQ  KVRYVPGWDCHGLPIELKVLQ+L    +++LTP
Sbjct: 81  NGSLHIGHALNKILKDIINRYQLLQGRKVRYVPGWDCHGLPIELKVLQNLKSAERQNLTP 140

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA +FA ATV  Q  +FKRYGVW DW++PYLTL PEYEAAQI VFGQM L+GYIY
Sbjct: 141 LQLRQKAKEFALATVDDQRQNFKRYGVWGDWDHPYLTLKPEYEAAQIGVFGQMVLKGYIY 200

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSIYA F +     +   +L E+LPDLG+A+
Sbjct: 201 RGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFPVTGLAEAVKSVLGEYLPDLGVAI 260

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVAVN  L YAVVE+  +   D    +N K             ++IVA
Sbjct: 261 WTTTPWTIPGNLAVAVNGDLNYAVVEVAQI---DVETQSNFK-------------YLIVA 304

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++LV  L A    +L +K T  G +LE+  Y HP+ +R+ PVV+GGDYITTESGTGLVHT
Sbjct: 305 AELVERLAATISAQLTVKATFKGKELEHTTYRHPLFDRESPVVVGGDYITTESGTGLVHT 364

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDYV  L+YGLPIL+PVDD G FT+EAG+F+GL+VLGDGN AV+  L    SL+
Sbjct: 365 APGHGQEDYVVGLRYGLPILAPVDDNGDFTQEAGEFAGLNVLGDGNQAVIDALTAAGSLL 424

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y HKYPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  VKW+P Q
Sbjct: 425 KEEAYAHKYPYDWRTKKPTIFRATEQWFASVEGFRDEALKAIATVKWIPAQ 475



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 92/208 (44%), Positives = 143/208 (68%), Gaps = 9/208 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADV+RLW SSVDYTGDV +G  +++Q++D+  K+R T R+LLG+LHD+    N
Sbjct: 654 KKEPPYGADVMRLWASSVDYTGDVRLGGNIIKQLNDVRGKIRNTARFLLGSLHDFDPEKN 713

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++ ++++P +D+Y L ++  + + + E++ES+QFF+ FQ +Q F +VDLSNFY DVAKDR
Sbjct: 714 AVQFEEMPQLDRYMLHRIREVFQEVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDVAKDR 773

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +F RRSCQTV+   L ++ R IAP+L H AED+WQ LP+       +  + VF
Sbjct: 774 LYISAPDAFRRRSCQTVIHIALQNLARAIAPVLCHTAEDIWQYLPYK------TPYKSVF 827

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           E+ W  +++KW    + E  FW ++ ++
Sbjct: 828 EAGWVQVEKKWHNPELAE--FWQQLRQL 853


>gi|186681922|ref|YP_001865118.1| isoleucyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|254782424|sp|B2IZP5.1|SYI_NOSP7 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|186464374|gb|ACC80175.1| isoleucyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 959

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/471 (64%), Positives = 366/471 (77%), Gaps = 18/471 (3%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LPKT+F MRANA+ REPEI K W++++++ R+ + N GE F+LHDGPPYA
Sbjct: 3   ESGSYKDTVNLPKTSFDMRANAIKREPEIQKFWEENKIYDRLFENNPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRY++L+  KVRYVPGWDCHGLPIELKVLQ++    +++LTP
Sbjct: 63  NGSLHIGHALNKILKDIINRYQMLRGRKVRYVPGWDCHGLPIELKVLQNMKSAERQNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA +F  ATV  Q  +FKRYG+W DW+NPYLTL PEYEAAQI VFGQM L+GYIY
Sbjct: 123 LQLRQKAKEFGLATVDNQRQNFKRYGIWGDWDNPYLTLKPEYEAAQIGVFGQMFLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGHVSRSIYA F + S   +   LL E+  DLG+A+
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHVSRSIYAAFPVTSLAEAVKPLLAEYQSDLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVAVNA L YAVVE+       S + A  K +           ++IVA
Sbjct: 243 WTTTPWTIPGNLAVAVNADLNYAVVEV-------SQSEAQSKFK-----------YLIVA 284

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLV  L +  G +L +K T  G+DLE+  Y HP+ +R+ P+V+GGDYITTESGTGLVHT
Sbjct: 285 ADLVERLSSTLGLELTLKATFKGNDLEHTTYRHPLFDRESPIVVGGDYITTESGTGLVHT 344

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPIL+PVDD G FT+EAG+F+GL+VLGDGN AV+  L    SL+
Sbjct: 345 APGHGQEDYIVGQRYGLPILAPVDDNGNFTQEAGEFAGLNVLGDGNQAVIDALAAAGSLL 404

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A+ AI  VKW+P Q
Sbjct: 405 KEEPYPHKYPYDWRTKKPTIFRATEQWFASVEGFREEALKAIATVKWIPAQ 455



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/205 (47%), Positives = 142/205 (69%), Gaps = 9/205 (4%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P YGADVLRLWVSSVDY+GDV IG  +++QM+D+  K+R T R+LLG+L D+    +++ 
Sbjct: 637 PAYGADVLRLWVSSVDYSGDVRIGKNIIKQMNDVRGKIRNTARFLLGSLDDFDPEKDTVP 696

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
           +++LP +D+Y L ++  + + + E++ES+QFF+ FQ +Q F +VDLSNFY DVAKDRLY 
Sbjct: 697 FEELPELDRYMLHRITEVFEEVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDVAKDRLYI 756

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
               +F RRSCQTVL   L ++ R IAP+L H AED+WQ LP+       +  + VFE+ 
Sbjct: 757 SAKDAFRRRSCQTVLKIALDNLARAIAPVLSHTAEDIWQYLPYK------TPYKSVFEAG 810

Query: 754 WPVLDEKWRTFPVGEIYFWGKILEV 778
           W  ++EKWR   + E  FW ++ ++
Sbjct: 811 WVQVEEKWRNPELAE--FWSELRKI 833


>gi|17228568|ref|NP_485116.1| isoleucyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|81772618|sp|Q8YXY3.1|SYI_NOSS1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|17130419|dbj|BAB73030.1| isoleucyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 960

 Score =  640 bits (1651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/471 (65%), Positives = 362/471 (76%), Gaps = 16/471 (3%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LPKT F MRANA+ REPEI K W+++++F  ++  N GE F+LHDGPPYA
Sbjct: 3   ETGSYKDTVNLPKTNFDMRANAIKREPEIQKFWEENKIFESLSQNNPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRY+LLQ  KVRYVPGWDCHGLPIELKVLQ+L    +++LTP
Sbjct: 63  NGSLHIGHALNKILKDIINRYQLLQGRKVRYVPGWDCHGLPIELKVLQNLKSAERQNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA +FA ATV  Q  +FKRYGVW DW+NPYLTL PEYEAAQI VFGQM L+GYIY
Sbjct: 123 LQLRQKAKEFALATVDNQRQNFKRYGVWGDWDNPYLTLKPEYEAAQIGVFGQMVLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSIYA F + S   +   LL E+LPDLG+A+
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFPVTSFAEAAKPLLGEYLPDLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVAVN  L Y++VE+               SR G   +   K ++IVA
Sbjct: 243 WTTTPWTIPGNLAVAVNGDLNYSLVEV---------------SRIGAETQSNFK-YLIVA 286

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLV  L A    +L +K T  G +LE+  Y HP+ +R+ PVV+GGDYITTESGTGLVHT
Sbjct: 287 ADLVERLAATISAQLTVKATFKGKELEHTTYRHPLFDRESPVVVGGDYITTESGTGLVHT 346

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDYV  L+YGLPIL+PVDD G FT+EAG+F+GL+VLG+GN AV+  L    SL+
Sbjct: 347 APGHGQEDYVVGLRYGLPILAPVDDNGDFTQEAGQFAGLNVLGEGNQAVIDALTAAGSLL 406

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y HKYPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  VKW+P Q
Sbjct: 407 KEEAYAHKYPYDWRTKKPTIFRATEQWFASVEGFRDEALKAIAAVKWIPAQ 457



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 92/208 (44%), Positives = 143/208 (68%), Gaps = 9/208 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADV+RLW SSVDYTGDV +G  +++Q++D+  K+R T R+LLG+L+D+    N
Sbjct: 636 KKEPPYGADVMRLWASSVDYTGDVRLGGNIIKQLNDVRGKIRNTARFLLGSLYDFDPEKN 695

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++ ++++P +D+Y L ++  + + + E++ES+QFF+ FQ +Q F +VDLSNFY DVAKDR
Sbjct: 696 AVQFEEMPQLDKYMLHRIREVFEEVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDVAKDR 755

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +F RRSCQTV+   L ++ R IAP+L H AED+WQ LP+       +  + VF
Sbjct: 756 LYISAPDAFRRRSCQTVIHIALENLARAIAPVLCHTAEDIWQYLPYK------TPYKSVF 809

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           E+ W  ++EKW    + E  FW ++ ++
Sbjct: 810 EAGWVQVEEKWHNPELAE--FWQQLRQL 835


>gi|427707880|ref|YP_007050257.1| isoleucyl-tRNA synthetase [Nostoc sp. PCC 7107]
 gi|427360385|gb|AFY43107.1| Isoleucyl-tRNA synthetase [Nostoc sp. PCC 7107]
          Length = 960

 Score =  640 bits (1650), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 307/471 (65%), Positives = 359/471 (76%), Gaps = 16/471 (3%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LPKT F MRANA+ REPEI K W D+++F R++ +N GE F+LHDGPPYA
Sbjct: 3   ETGSYKDTVNLPKTNFEMRANAIKREPEIQKFWADNKIFERLSQENPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRY+LLQ  KVRYVPGWDCHGLPIELKVLQ+L    ++ LTP
Sbjct: 63  NGSLHIGHALNKILKDIINRYQLLQGRKVRYVPGWDCHGLPIELKVLQNLKSAERQSLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA +FA ATV  Q  +F+RYGVW DW+NPYLTL PEYEAAQI VFGQM L+GYIY
Sbjct: 123 LQLRQKAKEFALATVDDQRKNFQRYGVWGDWDNPYLTLKPEYEAAQIGVFGQMVLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSIYA F +     +   +L E+LP+LG+AV
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFPVTGLSEAAKSVLGEYLPELGVAV 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVAVN  L YAVVE+      D+ A    K             ++IVA
Sbjct: 243 WTTTPWTIPGNLAVAVNGDLNYAVVEVSRR---DAEAQRGFK-------------YLIVA 286

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLV  L A    +L +K T  G +LE+  Y HP+ +R+ PVV+GGDYITTESGTGLVHT
Sbjct: 287 ADLVERLAATISAELTVKATFKGKELEHTTYRHPLYDRESPVVVGGDYITTESGTGLVHT 346

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPIL+PVDD G FTEEAG+F+GL+VLGDGN AV+  L    SL+
Sbjct: 347 APGHGQEDYIVGQRYGLPILAPVDDNGNFTEEAGQFAGLNVLGDGNQAVIDALTAAGSLL 406

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y HKYPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  VKW+P Q
Sbjct: 407 KEEAYAHKYPYDWRTKKPTIFRATEQWFASVEGFRDEALKAIASVKWIPAQ 457



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 94/199 (47%), Positives = 140/199 (70%), Gaps = 9/199 (4%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P YGADVLRLWVSSVDY+GDV IG  +++Q++D+  K+R T R+LLG+LHD+    +++ 
Sbjct: 639 PAYGADVLRLWVSSVDYSGDVRIGKNIIKQLNDVRGKIRNTARFLLGSLHDFDPEKDAVP 698

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
           ++DLP +D+Y L ++  + + + E+++S+QFF+ FQ +Q F +VDLSNFY D+AKDRLY 
Sbjct: 699 FEDLPQLDKYMLHRIREVFQEVTEAFDSFQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYI 758

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
             + SF RRSCQTV+   L ++ R IAP+L H AED+WQ LP+       +  + VF++ 
Sbjct: 759 SASKSFRRRSCQTVIHVALENLARAIAPVLCHTAEDIWQYLPYK------TPYKSVFQAG 812

Query: 754 WPVLDEKWRTFPVGEIYFW 772
           W  +++KW    +GE  FW
Sbjct: 813 WVQVEDKWDNPELGE--FW 829


>gi|440683129|ref|YP_007157924.1| Isoleucyl-tRNA synthetase [Anabaena cylindrica PCC 7122]
 gi|428680248|gb|AFZ59014.1| Isoleucyl-tRNA synthetase [Anabaena cylindrica PCC 7122]
          Length = 960

 Score =  635 bits (1639), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 310/523 (59%), Positives = 376/523 (71%), Gaps = 31/523 (5%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G+YK TV+LPKT F MRANA+ REPEI K W+++ ++ R++++N GE F+LHDGPPYA
Sbjct: 3   EPGQYKDTVNLPKTNFDMRANAIKREPEIQKFWEENNIYSRLSEENPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LH+GHALNKILKDIINRY LLQ  K+RYVPGWDCHGLPIELKVLQ++ +  +++LTP
Sbjct: 63  NGQLHIGHALNKILKDIINRYHLLQGRKIRYVPGWDCHGLPIELKVLQNMKQAERQNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA  FA  TV  Q  SFKRYG+W DW NPYLTL PEYEAAQI VFG+M L+GYIY
Sbjct: 123 LQLRQKAKDFALKTVDEQRESFKRYGIWGDWENPYLTLKPEYEAAQIGVFGEMFLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGHVSRSIYA F +V         L+ FLPDLG+AV
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHVSRSIYAAFPVVKVSEGLKASLDAFLPDLGVAV 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVAVN  L+YAVVE+      D+ A    K             ++IVA
Sbjct: 243 WTTTPWTIPGNLAVAVNGALEYAVVEVS---RRDAEAQRGCK-------------YLIVA 286

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++LV  L A   ++L +K   AG DLE   Y HP+ +R+  VV+GGDYITTESGTGLVHT
Sbjct: 287 AELVERLAAVLDSELTVKAKFAGKDLEGTTYRHPLFDRESLVVVGGDYITTESGTGLVHT 346

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPIL+PVDD G FT+EAGKF+GL+VLGDGN A++  L E  SL+
Sbjct: 347 APGHGQEDYIVGQRYGLPILAPVDDSGNFTDEAGKFAGLNVLGDGNQAIIDALSEAGSLL 406

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ--------- 572
            EE Y HKYPYDWRTKKPTIFRATEQWFASV GFR+ A+ AI  V+W+P Q         
Sbjct: 407 KEEAYPHKYPYDWRTKKPTIFRATEQWFASVAGFREDALKAIASVRWIPAQGENRITPMI 466

Query: 573 -EAPGYGADVLRLWVSSV-----DYTGDVMIGPQVLRQMSDIY 609
            E   +     R W   +     D TG+V++  + +  +  I+
Sbjct: 467 AERSDWCISRQRSWGVPIPVFYDDATGEVLLNAETINHVQAIF 509



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 95/202 (47%), Positives = 141/202 (69%), Gaps = 9/202 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+GDV +G  +++Q++D+  K+R T R+LLG+LHD+    +
Sbjct: 636 KQQPAYGADVLRLWVSSVDYSGDVRLGNNIIKQLADVRNKIRNTARFLLGSLHDFDPQKD 695

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++++ DLP +D+Y L ++  +   + E+++S+QFF+ FQ +Q F +VDLSNFY DVAKDR
Sbjct: 696 AVAFADLPDLDKYMLHRIREVFNEVTEAFDSFQFFRFFQTVQNFCVVDLSNFYLDVAKDR 755

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY   T +F RRSCQTVL   L ++ R IAP+L H AED+WQ +P+       +A + VF
Sbjct: 756 LYISSTDAFRRRSCQTVLQIALENLARAIAPVLCHTAEDIWQFIPYK------TAYKSVF 809

Query: 751 ESKWPVLDEKWRTFPVGEIYFW 772
           E+ W  +D++W    + E  FW
Sbjct: 810 EAGWVQVDDEWENEDLAE--FW 829


>gi|414077208|ref|YP_006996526.1| isoleucyl-tRNA synthetase [Anabaena sp. 90]
 gi|413970624|gb|AFW94713.1| isoleucyl-tRNA synthetase [Anabaena sp. 90]
          Length = 972

 Score =  634 bits (1635), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 301/471 (63%), Positives = 358/471 (76%), Gaps = 13/471 (2%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G+YK TV+LPKT F MRANA+ REPEI K W+++ ++ ++A+ N GE F+LHDGPPYA
Sbjct: 3   ETGKYKDTVNLPKTNFDMRANAIKREPEIQKFWEENHIYSQLAENNPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LH+GHALNKILKDIINRY LLQ  K+RYVPGWDCHGLPIELKVLQ++ +  +++LTP
Sbjct: 63  NGQLHIGHALNKILKDIINRYHLLQGRKIRYVPGWDCHGLPIELKVLQNMKQAERQNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA +FA  TV  Q  SFKRYG+W DW NPYLTL PEYEAAQI VFG+M L+GYIY
Sbjct: 123 LQLRQKAKEFALKTVDEQRESFKRYGIWGDWENPYLTLKPEYEAAQIGVFGEMFLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGHVSRSIYA F +V         L+ FLPDLG+AV
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHVSRSIYAAFPVVKVAEGLKASLDGFLPDLGVAV 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVAVN  L+YAVVE+    +    A A ++ R           ++IVA
Sbjct: 243 WTTTPWTIPGNLAVAVNGALEYAVVEVSR--KDAQGAKAQRECR-----------YLIVA 289

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++LV  L      +L +K   AG DLE   Y HP+ +R+ PVV+GGDYITTESGTGLVHT
Sbjct: 290 AELVERLGEVLDCELTVKAKFAGKDLEGTTYRHPLFDRESPVVVGGDYITTESGTGLVHT 349

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPIL+PVDD G FT+EAGKFSGL+VLG+GN A++  L E   L+
Sbjct: 350 APGHGQEDYIVGQRYGLPILAPVDDSGNFTDEAGKFSGLNVLGEGNQAIIDALSEAGYLL 409

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y HKYPYDWRTKKPTIFRATEQWFASV GFR  A+ AI  V+W+P Q
Sbjct: 410 KEEAYPHKYPYDWRTKKPTIFRATEQWFASVAGFRDEALKAISSVRWIPAQ 460



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 138/202 (68%), Gaps = 9/202 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+GDV +G  +++Q++D+  K+R T R+LLG+LHD+    +
Sbjct: 639 KQQPAYGADVLRLWVSSVDYSGDVRLGGNIIKQLADVRNKIRNTARFLLGSLHDFDPQKD 698

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            +++DDLP +D+Y L ++  +   + ++++S+QFF+ FQ +Q F +VDLSNFY DVAKDR
Sbjct: 699 VVAFDDLPDLDKYMLHRIREVFNEVTDAFDSFQFFRFFQTVQNFCVVDLSNFYLDVAKDR 758

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +F RRSCQTVL   L ++   IAP+L H AED+WQ +P+       +  + VF
Sbjct: 759 LYISSADAFRRRSCQTVLQIALENLAIAIAPVLCHTAEDIWQFIPYE------TQYKSVF 812

Query: 751 ESKWPVLDEKWRTFPVGEIYFW 772
           ++ W  +D+KW    + E  FW
Sbjct: 813 QAGWVQVDDKWDNPELAE--FW 832


>gi|428773540|ref|YP_007165328.1| isoleucyl-tRNA synthetase [Cyanobacterium stanieri PCC 7202]
 gi|428687819|gb|AFZ47679.1| Isoleucyl-tRNA synthetase [Cyanobacterium stanieri PCC 7202]
          Length = 972

 Score =  631 bits (1628), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 301/471 (63%), Positives = 368/471 (78%), Gaps = 13/471 (2%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LP+T+F MRANA+ +EPE+ K W ++Q++ ++A+ N  E FVLHDGPPYA
Sbjct: 3   EPKSYKDTVNLPQTSFNMRANAVQKEPELQKFWAENQIYEKLAENNPKELFVLHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LHMGHALNK+LKDIIN+YKLLQ +KVRYVPGWDCHGLPIELKVLQS+ E+ + +L+P
Sbjct: 63  NGDLHMGHALNKVLKDIINKYKLLQGHKVRYVPGWDCHGLPIELKVLQSIPEEKRPELSP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            KLR KA  FA  T K Q   FKRYG+W DW NPYLTL PEYEAAQIEVFG+M+L GYIY
Sbjct: 123 IKLRYKARDFALKTQKKQAEGFKRYGIWGDWENPYLTLKPEYEAAQIEVFGKMALNGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSIYA F +       S  L +++P+LG+A+
Sbjct: 183 RGLKPVHWSPSSQTALAEAELEYPEGHTSRSIYASFTITKLSDKASH-LEQYMPNLGVAI 241

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVAVN KL YAVVE+  + E D   P         ++K+ +  F+IVA
Sbjct: 242 WTTTPWTIPGNLAVAVNGKLDYAVVEV--IAENDPPKPP--------LIKEGQ--FLIVA 289

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            DLV +L   +G KL +K T+ G+DLE   Y HP+ +R+ PVVIGGDYITTESGTGLVHT
Sbjct: 290 QDLVESLGNTFGAKLAVKTTVKGADLELSTYKHPLFDRESPVVIGGDYITTESGTGLVHT 349

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+T  KY LPILSPVD++G FTEEAG+F+GL+VL D N A++  L ++ SL+
Sbjct: 350 APGHGQEDYITGQKYHLPILSPVDNKGNFTEEAGEFAGLNVLKDANQAIIDALTDKGSLL 409

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y+HKYPYDWRTK+PTIFRATEQWFASV+GFR+ A+ AI +V W+P Q
Sbjct: 410 KEEAYQHKYPYDWRTKQPTIFRATEQWFASVDGFREEALKAIKEVNWIPAQ 460



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 98/195 (50%), Positives = 135/195 (69%), Gaps = 7/195 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSS DY+ DV IG  +++Q++D+YRK+R T R+L+G+LHD+    N
Sbjct: 639 KQQPPYGADVLRLWVSSTDYSADVRIGDSIIKQLADVYRKIRNTARFLIGSLHDFDPAKN 698

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y DLP +D+Y L +   +   I E+YES+QFFK FQ +Q F +VDLSNFY DVAKDR
Sbjct: 699 AVNYADLPELDKYILHETHEVFTEITEAYESFQFFKFFQKVQNFCVVDLSNFYLDVAKDR 758

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RRSCQTV++  L ++ R IAP+L H+AED+WQNLP++           VF
Sbjct: 759 LYISDLDSARRRSCQTVMAIILENLARAIAPVLCHMAEDIWQNLPYS------KPCNSVF 812

Query: 751 ESKWPVLDEKWRTFP 765
           E+ W  L+ +W   P
Sbjct: 813 EAGWVKLEPEWVQSP 827


>gi|302754402|ref|XP_002960625.1| hypothetical protein SELMODRAFT_437676 [Selaginella moellendorffii]
 gi|300171564|gb|EFJ38164.1| hypothetical protein SELMODRAFT_437676 [Selaginella moellendorffii]
          Length = 1707

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 309/507 (60%), Positives = 368/507 (72%), Gaps = 24/507 (4%)

Query: 86  RGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVAD 145
           R PV+AA K A   K+ + RYK T++LP+T F ++AN++ REPEI + W+  Q+   +  
Sbjct: 131 RSPVLAAAKNAG--KQPDSRYKGTIELPQTKFSLKANSVTREPEIQRFWEQKQLLETITQ 188

Query: 146 KNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIEL 205
           KN GE F LHDGPPYANG+LHMGHALNKILKD INRY+LLQ  K+ YVPGWDCHGLPIEL
Sbjct: 189 KNQGEPFTLHDGPPYANGDLHMGHALNKILKDFINRYQLLQGRKIFYVPGWDCHGLPIEL 248

Query: 206 KVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEA 265
           KVLQS+D +A+  L+P +LR KAA+FA  TV  Q +SF+RYGVW  WN+PYLTL P YEA
Sbjct: 249 KVLQSIDAEARMKLSPIELRKKAAEFALKTVDQQRSSFQRYGVWGSWNSPYLTLQPAYEA 308

Query: 266 AQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPS 325
           AQI VF QM L GYIYRG+KPVHWSPSS TALAEAELEYPEGH SRS+YAVF+M  A   
Sbjct: 309 AQIGVFCQMVLNGYIYRGRKPVHWSPSSGTALAEAELEYPEGHTSRSMYAVFKMTFASDK 368

Query: 326 TSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKS- 384
               L   L  LG+A+WTTTPWT+P N  VAVN KL Y+VVE+  +   D ++   KKS 
Sbjct: 369 FPKELEYLLSSLGVAIWTTTPWTIPGNTGVAVNDKLMYSVVEV--VFNNDDSSLGGKKST 426

Query: 385 ----RPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQ 440
               + GN L       +IVA+DLV +LE KW  +LV+K +  GS LE CRY HP++NR+
Sbjct: 427 KAGRKYGNGLLKPVVSHLIVAADLVSSLEDKWNVQLVVKGSCTGSALEFCRYKHPLENRE 486

Query: 441 CPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGL 500
             +VIGGDYITT+SGTGLVHTAPGHGQED+VT  KYGLP+LSPVDD G FT+EA +F+G+
Sbjct: 487 GVIVIGGDYITTDSGTGLVHTAPGHGQEDFVTGQKYGLPMLSPVDDNGNFTDEANEFAGM 546

Query: 501 DVLGDGNVAVVKYLDEQMSLIMEEPYE---------------HKYPYDWRTKKPTIFRAT 545
            VL DGN AV+K LD   SL+MEE Y                HKYPYDWRTKKPTIFRAT
Sbjct: 547 SVLSDGNEAVIKALDANSSLLMEEAYGKNNLQMFPRIDSRIVHKYPYDWRTKKPTIFRAT 606

Query: 546 EQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           EQWFASVEGF   A+ AI  V W+P Q
Sbjct: 607 EQWFASVEGFMPLALAAIKNVDWIPSQ 633



 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 129/217 (59%), Positives = 167/217 (76%)

Query: 572  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
            +E P YGADVLRLWV+SVDYTGDV IGPQ+L+Q +D+YRKLRGTLRYLL NLHDW+    
Sbjct: 809  KEQPAYGADVLRLWVASVDYTGDVAIGPQILKQTADVYRKLRGTLRYLLSNLHDWKPELE 868

Query: 632  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
            I YDDLP ID+Y LFQL +++ ++++S + YQF K FQ +QR+ ++DLSNFY D++KDRL
Sbjct: 869  IEYDDLPGIDKYTLFQLASVMDSLKDSLDKYQFGKFFQSVQRYAVLDLSNFYLDISKDRL 928

Query: 692  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
            Y GGT SFTRRSCQ VL++ LL + R I+P++PHLAED WQ+LPF+Y L DGS AE VFE
Sbjct: 929  YVGGTDSFTRRSCQAVLASLLLYLARGISPVVPHLAEDAWQHLPFSYILPDGSKAESVFE 988

Query: 752  SKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNET 788
            + WP +D +WRT    +   W  +LE+ V V  + E+
Sbjct: 989  AGWPEVDPRWRTISDRDKKLWSLLLELRVEVNKVLES 1025


>gi|354567853|ref|ZP_08987020.1| Isoleucyl-tRNA synthetase [Fischerella sp. JSC-11]
 gi|353541527|gb|EHC10994.1| Isoleucyl-tRNA synthetase [Fischerella sp. JSC-11]
          Length = 958

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 302/471 (64%), Positives = 358/471 (76%), Gaps = 18/471 (3%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LPKT F MRANA  REPEI K W++++++ R++  N GE F+LHDGPPYA
Sbjct: 3   ETGSYKDTVNLPKTKFDMRANASKREPEIQKFWEENKIYDRLSQNNPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRY+LL+  KVRYVPGWDCHGLPIELKVLQ++    +++LTP
Sbjct: 63  NGSLHIGHALNKILKDIINRYQLLRGRKVRYVPGWDCHGLPIELKVLQNMKAAERQNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA +FA   V  Q  SFKRYGVW DW +PYLTL PEYEAAQI VFGQM L+GYIY
Sbjct: 123 LQLRQKAKEFALNAVNEQRDSFKRYGVWGDWEHPYLTLTPEYEAAQIGVFGQMVLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSIYA F + S   +    L+EFLP+LG+A+
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFPVTSLAEAVKPALSEFLPNLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVA+N +L YAVVE+ S  EG                      ++IVA
Sbjct: 243 WTTTPWTIPGNLAVALNPELNYAVVEVTSSGEGLGFK------------------YLIVA 284

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLV  L A   T L +K T+ G DLE+  Y HP+ +R+ P+VIGGDY+TTESGTGLVHT
Sbjct: 285 ADLVERLSATLETPLSVKATVKGKDLEHSTYRHPLYDRESPIVIGGDYVTTESGTGLVHT 344

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPIL+PVDD G FT EAG+F+GL+VLGDGN AV+  L    SL+
Sbjct: 345 APGHGQEDYIVGQRYGLPILAPVDDNGNFTPEAGQFAGLNVLGDGNQAVIDALTIAGSLL 404

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY HKYPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V+W+P Q
Sbjct: 405 KEEPYVHKYPYDWRTKKPTIFRATEQWFASVEGFRAEALKAIASVRWIPAQ 455



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 93/208 (44%), Positives = 136/208 (65%), Gaps = 9/208 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDYT DV +G  +++Q+ DI  K+R T + LLGNLHD+    +
Sbjct: 634 KKEPAYGADVLRLWVSSVDYTSDVRLGSNIIKQLVDIRNKIRNTAKNLLGNLHDFDPAKD 693

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++ Y+ LP +D+Y L ++  + + + E+++S+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 694 AVPYEQLPQLDKYMLHRMTEVFQEVTEAFDSFQFFRFFQTVQNFCVVDLSNFYMDIAKDR 753

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +  RRSCQTV    L ++ + IAP+L HLAED+WQ LP+       +  + VF
Sbjct: 754 LYISTPNALRRRSCQTVYWYALENLAKAIAPVLCHLAEDIWQYLPYH------TPHKSVF 807

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           ES W  L + W    +    FW ++ E+
Sbjct: 808 ESGWVQLQQNWHNPELAT--FWQQLREI 833


>gi|302803323|ref|XP_002983415.1| hypothetical protein SELMODRAFT_445517 [Selaginella moellendorffii]
 gi|300149100|gb|EFJ15757.1| hypothetical protein SELMODRAFT_445517 [Selaginella moellendorffii]
          Length = 1155

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 310/507 (61%), Positives = 368/507 (72%), Gaps = 24/507 (4%)

Query: 86  RGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVAD 145
           R PV+AA K A   K+ + RYK T++LP+T F ++AN++ REPEI + W+  Q+   +  
Sbjct: 132 RSPVLAAAKNAG--KQPDSRYKGTIELPQTKFSLKANSVTREPEIQRFWEQKQLLETITQ 189

Query: 146 KNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIEL 205
           KN GE F LHDGPPYANG+LHMGHALNKILKD INRY+LLQ  K+ YVPGWDCHGLPIEL
Sbjct: 190 KNQGEPFTLHDGPPYANGDLHMGHALNKILKDFINRYQLLQGRKIFYVPGWDCHGLPIEL 249

Query: 206 KVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEA 265
           KVLQS+D +A+  L+P +LR KAA+FA  TV  Q +SF+RYGVW  WN+PYLTL P YEA
Sbjct: 250 KVLQSIDAEARMKLSPIELRKKAAEFALKTVDQQRSSFQRYGVWGSWNSPYLTLQPAYEA 309

Query: 266 AQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPS 325
           AQI VF QM L GYIYRG+KPVHWSPSS TALAEAELEYPEGH SRS+YAVF+M      
Sbjct: 310 AQIGVFCQMVLNGYIYRGRKPVHWSPSSGTALAEAELEYPEGHTSRSMYAVFKMTFTSDK 369

Query: 326 TSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKS- 384
               L   L  LG+A+WTTTPWTVP N  VAVN KL Y+VVE+  +L  D ++   KKS 
Sbjct: 370 FPKELEYLLSSLGVAIWTTTPWTVPGNTGVAVNEKLTYSVVEV--VLNNDDSSLGGKKST 427

Query: 385 ----RPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQ 440
               + GN L       +IVA+DLV +LE KW  +LV+K +  GS LE CRY HP++NR+
Sbjct: 428 KAGRKYGNGLLKPVVSHLIVAADLVSSLEDKWNVQLVVKGSCTGSALEFCRYKHPLENRE 487

Query: 441 CPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGL 500
             +VIGGDYITT+SGTGLVHTAPGHGQED+VT  KYGLP+LSPVDD G FT+EA +F+G+
Sbjct: 488 GVIVIGGDYITTDSGTGLVHTAPGHGQEDFVTGQKYGLPMLSPVDDNGNFTDEANEFAGM 547

Query: 501 DVLGDGNVAVVKYLDEQMSLIMEEPYE---------------HKYPYDWRTKKPTIFRAT 545
            VL DGN AV+K LD   SL+MEE Y                HKYPYDWRTKKPTIFRAT
Sbjct: 548 SVLSDGNEAVIKALDANSSLLMEEAYGKNNLQMFPRIDSRIVHKYPYDWRTKKPTIFRAT 607

Query: 546 EQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           EQWFASVEGF   A+ AI  V W+P Q
Sbjct: 608 EQWFASVEGFMPLALAAIKNVDWIPSQ 634



 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 130/217 (59%), Positives = 168/217 (77%)

Query: 572  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
            +E P YGADVLRLWV+SVDYTGDV IGPQ+L+Q +D+YRKLRGTLRYLL NLHDW+    
Sbjct: 810  KEQPAYGADVLRLWVASVDYTGDVAIGPQILKQTADVYRKLRGTLRYLLSNLHDWKPELE 869

Query: 632  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
            I YDDLP ID+Y LFQL +++ ++++S + YQF K FQ +QR+ ++DLSNFY D++KDRL
Sbjct: 870  IEYDDLPGIDKYTLFQLASVMDSLKDSLDKYQFGKFFQSVQRYAVLDLSNFYLDISKDRL 929

Query: 692  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
            Y GGT SFTRRSCQTVL++ LL + R I+P++PHLAED WQ+LPF+Y L DGS AE VFE
Sbjct: 930  YVGGTDSFTRRSCQTVLASLLLYLARGISPVVPHLAEDAWQHLPFSYILPDGSKAESVFE 989

Query: 752  SKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNET 788
            + WP +D +WRT    +   W  +LE+ V V  + E+
Sbjct: 990  AGWPEVDPRWRTISDRDKKLWSLLLELRVEVNKVLES 1026


>gi|427716716|ref|YP_007064710.1| isoleucyl-tRNA synthetase [Calothrix sp. PCC 7507]
 gi|427349152|gb|AFY31876.1| Isoleucyl-tRNA synthetase [Calothrix sp. PCC 7507]
          Length = 976

 Score =  629 bits (1622), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 302/474 (63%), Positives = 362/474 (76%), Gaps = 6/474 (1%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LPKT F MRANA+ REPEI K W++++++ R+ + N GE F+LHDGPPYA
Sbjct: 3   ETGSYKDTVNLPKTNFDMRANAIKREPEIQKFWEENKIYDRLFENNPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRY +L+  KVRY+PGWDCHGLPIELKVLQ++    +++LTP
Sbjct: 63  NGSLHIGHALNKILKDIINRYHILRGRKVRYIPGWDCHGLPIELKVLQNMKSAERQNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA +FA ATV  Q  SFKRYGVW DW+NPYLTL PEYEAAQI VFGQM L+GYIY
Sbjct: 123 LQLRQKAKEFALATVDDQRQSFKRYGVWGDWDNPYLTLKPEYEAAQIGVFGQMFLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSIYA F +     +    L+E+LPDLG+A+
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFPVTGLSEALKPTLSEYLPDLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAA---PANKKSRPGNVLKDQKKVFI 398
           WTTTPWT+P N AVAVN +L YA+VE+ S   G   A   P  +  R     +  K  ++
Sbjct: 243 WTTTPWTIPGNLAVAVNGELNYAIVEV-SRRGGHLRAGVPPVEQSVRHAEARRGFK--YL 299

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           IVA++LV  L      +L +K T  G DLE+  Y H + +R+ PVV+GGDYITTESGTGL
Sbjct: 300 IVAAELVERLSTTLDVELTVKTTFQGQDLEHTTYRHSLFDRESPVVVGGDYITTESGTGL 359

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQM 518
           VHTAPGHGQEDY+   +YGLPIL+PVDD G FT EAG+F+GL+VLGDGN AV+  L    
Sbjct: 360 VHTAPGHGQEDYIVGQRYGLPILAPVDDNGNFTAEAGEFAGLNVLGDGNQAVIDALMAAG 419

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           SL+ EE Y HKYPYDWRTKKPTIFRATEQWFASV GFR+AA+ AI  VKW+P Q
Sbjct: 420 SLLKEEAYAHKYPYDWRTKKPTIFRATEQWFASVAGFREAALKAIATVKWIPAQ 473



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 137/202 (67%), Gaps = 9/202 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +++Q++D+  K+R T R+LLG+L+D+    +
Sbjct: 652 KQEPAYGADVLRLWVSSVDYSSDVRIGKNIIKQLNDVRGKIRNTARFLLGSLNDFDPEKD 711

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            + ++DLP +D+Y L ++  + + + E+++S+QFF+ FQ +Q F +VDLSNFY DVAKDR
Sbjct: 712 KVPFEDLPQLDKYMLHRIFEVFQEVTEAFDSFQFFRFFQTVQNFCVVDLSNFYLDVAKDR 771

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +F RRSCQTVL   L ++ + IAP+L H AED+WQ LP+       +  + VF
Sbjct: 772 LYISAPDAFRRRSCQTVLQIALENLAKAIAPVLSHTAEDIWQYLPYK------TPYKSVF 825

Query: 751 ESKWPVLDEKWRTFPVGEIYFW 772
           ES W  ++  W    +GE  FW
Sbjct: 826 ESGWVQIESAWLNPDLGE--FW 845


>gi|434403042|ref|YP_007145927.1| Isoleucyl-tRNA synthetase [Cylindrospermum stagnale PCC 7417]
 gi|428257297|gb|AFZ23247.1| Isoleucyl-tRNA synthetase [Cylindrospermum stagnale PCC 7417]
          Length = 996

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 300/493 (60%), Positives = 365/493 (74%), Gaps = 24/493 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G+YK TV LPKT F MRANA  REPEI K W+++Q++ R++ +N GE F+LHDGPPYA
Sbjct: 3   ETGKYKDTVKLPKTKFDMRANASKREPEIQKFWEENQIYSRLSQENPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRY+LL+  KVRYVPGWDCHGLPIELKVLQ++    +++LT 
Sbjct: 63  NGSLHIGHALNKILKDIINRYQLLKGRKVRYVPGWDCHGLPIELKVLQNMKSAERQNLTT 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA +FA  TV  Q  SFK+YGVW DWNNPYLTL PEYEAAQI VFG+M L+GYIY
Sbjct: 123 LQLRQKAQEFALKTVDDQRESFKQYGVWGDWNNPYLTLKPEYEAAQIGVFGEMFLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGHVSRSIYA F +     +    L  +LPDL +A+
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHVSRSIYAAFPVTGVSEALKSSLAAYLPDLAVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKV----- 396
           WTTTPWT+P N AVAVNA L Y+VVE++      + +P  ++     V+    +      
Sbjct: 243 WTTTPWTIPGNLAVAVNADLHYSVVEVEP--HPPTPSPQARRGSEEEVVSSTPQAGSEEF 300

Query: 397 -----------------FIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNR 439
                            ++IVA++LV  L A    +L ++ T +G DLE   Y HP+ +R
Sbjct: 301 TSPSLLAERGTEGVRFRYLIVAAELVERLAAFLDVELTVRATFSGKDLEGTTYRHPLFDR 360

Query: 440 QCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSG 499
           + PVV+GGDYITT+SGTGLVHTAPGHGQEDY+   +YGLPIL+PVDD G FT EAGKF G
Sbjct: 361 ESPVVVGGDYITTDSGTGLVHTAPGHGQEDYIVGQRYGLPILAPVDDNGNFTAEAGKFVG 420

Query: 500 LDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAA 559
           L+VLGDGN AV+  L E  SL+ EE Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+AA
Sbjct: 421 LNVLGDGNQAVIDALTEAGSLLKEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFREAA 480

Query: 560 MDAIGQVKWVPPQ 572
           ++AI  V+W+P Q
Sbjct: 481 LNAIASVRWIPAQ 493



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 89/193 (46%), Positives = 134/193 (69%), Gaps = 7/193 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV +G  +++Q++D+  K+R T R+LLG+L D+    +
Sbjct: 672 KQQPAYGADVLRLWVSSVDYSSDVRLGSNIIKQLADVRNKIRNTARFLLGSLDDFNPETD 731

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++ ++ LP +D+Y L ++  +   + E+++S+QFF+ FQ +Q F +VDLSNFY DVAKDR
Sbjct: 732 AVPFEKLPELDKYMLHRIREVFNEVTEAFDSFQFFRFFQTVQNFCVVDLSNFYLDVAKDR 791

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY   T +F RRSCQTVL   L ++V+ IAP+L H AED+WQ +P+       +  + VF
Sbjct: 792 LYISSTDAFRRRSCQTVLQIALENLVKAIAPVLCHTAEDIWQFIPYK------TPYKSVF 845

Query: 751 ESKWPVLDEKWRT 763
           E+ W  L +KW+ 
Sbjct: 846 EAGWVQLADKWQN 858


>gi|428311685|ref|YP_007122662.1| isoleucyl-tRNA synthetase [Microcoleus sp. PCC 7113]
 gi|428253297|gb|AFZ19256.1| Isoleucyl-tRNA synthetase [Microcoleus sp. PCC 7113]
          Length = 967

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 297/471 (63%), Positives = 353/471 (74%), Gaps = 21/471 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LP+T F MRANA+ REPE+ + W +HQ++ +++  N GE F+LHDGPPYA
Sbjct: 3   EAKSYKDTVNLPQTKFDMRANAVKREPELQQFWAEHQIYEQLSQNNPGEIFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LHMGHALNKILKDIIN+Y+LLQ  KVRYVPGWDCHGLPIELKVLQ++  + +++LTP
Sbjct: 63  NGSLHMGHALNKILKDIINKYQLLQGRKVRYVPGWDCHGLPIELKVLQNMKSEERQNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
             LR KA  FA   V  Q   FKRYGVW DW +PYLTL PEYEAAQI VFGQM L+GYIY
Sbjct: 123 LTLRHKARDFALKAVDEQRQGFKRYGVWGDWEHPYLTLTPEYEAAQIGVFGQMVLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRS+YA FRM         +L  FLPDLG+A+
Sbjct: 183 RGLKPVHWSPSSQTALAEAELEYPEGHTSRSLYAAFRMTQPAAGVKEVLEPFLPDLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVAVN +L YAVV++ S                     +    ++IVA
Sbjct: 243 WTTTPWTLPGNLAVAVNPELNYAVVQVGS---------------------ESPYKYLIVA 281

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLV  L   +GT L +K T+ G  LE+  Y HP+ +RQ PVVIGGDY+TTESGTGLVHT
Sbjct: 282 ADLVERLSETFGTPLTVKATMPGKALEHSTYQHPLFDRQSPVVIGGDYVTTESGTGLVHT 341

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY    +YGLPILSPVDD+G FT+EAGKF+GL+VL D N A+++ ++   SL+
Sbjct: 342 APGHGQEDYQVGQRYGLPILSPVDDKGNFTQEAGKFAGLNVLKDANEAIIQAMEAAGSLL 401

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY HKYPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  VKW+P Q
Sbjct: 402 KEEPYLHKYPYDWRTKKPTIFRATEQWFASVEGFRDEALKAIASVKWIPAQ 452



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 92/189 (48%), Positives = 131/189 (69%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P YGADVLRLWVSSVDY+ D+ +   +L+Q+ D+  K+R T R+LLGNLHD+    +++ 
Sbjct: 643 PPYGADVLRLWVSSVDYSADIPLSTTILKQLGDVRGKIRNTARFLLGNLHDFDPEKHTVP 702

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
           Y++LP +D+Y L ++  + + + E++ SYQFF+ FQ IQ F +VDLSNFY D+AKDRLY 
Sbjct: 703 YEELPELDRYMLHRMTEVFQEVTEAFNSYQFFRFFQTIQNFCVVDLSNFYLDIAKDRLYI 762

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
               S  RRSCQTV+   L ++ R IAP+L HLAED+WQ LP+       +  + VFE+ 
Sbjct: 763 SSPDSSRRRSCQTVMVVALENLARAIAPVLSHLAEDIWQYLPYK------TPYKSVFEAG 816

Query: 754 WPVLDEKWR 762
           W  L++KW+
Sbjct: 817 WVKLEDKWK 825


>gi|297736880|emb|CBI26081.3| unnamed protein product [Vitis vinifera]
          Length = 1221

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 297/365 (81%), Positives = 335/365 (91%)

Query: 208 LQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ 267
           LQSLD+DA+++LTP KLRAKA++FAKATVK QMASFKRYGVW DWNNPYLTLDPEYEA+Q
Sbjct: 334 LQSLDQDARRELTPLKLRAKASRFAKATVKNQMASFKRYGVWGDWNNPYLTLDPEYEASQ 393

Query: 268 IEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTS 327
           IEVFGQM+LQGYIYRG+KPVHWSPSSRTALAEAELEYPEGH+S+SIYA+FR+VSAP ++ 
Sbjct: 394 IEVFGQMALQGYIYRGRKPVHWSPSSRTALAEAELEYPEGHISKSIYAIFRLVSAPVTSG 453

Query: 328 GLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPG 387
             L +FLPDL LA+WTTTPWT+PANAAVAVNAKLQY+VVE+ S LE  S +  N+K R G
Sbjct: 454 TSLEDFLPDLCLAIWTTTPWTIPANAAVAVNAKLQYSVVEVHSPLEDVSKSKQNEKGRLG 513

Query: 388 NVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGG 447
           N LK+QK +F++VASDLVPTLEAKWG KLVIKKTL GSDLENCRY+HP+D R+CPVVIGG
Sbjct: 514 NALKEQKNLFLVVASDLVPTLEAKWGLKLVIKKTLLGSDLENCRYIHPIDKRECPVVIGG 573

Query: 448 DYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGN 507
           DYITTESGTGLVHTAPGHGQEDYVT +KYGLPILSPVDD+GKFTEEAG+FSGLDVLGDGN
Sbjct: 574 DYITTESGTGLVHTAPGHGQEDYVTGMKYGLPILSPVDDDGKFTEEAGQFSGLDVLGDGN 633

Query: 508 VAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVK 567
            AVV++LDE +S+IMEEPY+HKYPYDWRTKKPTIFRATEQWFASVEGFRQ AM AIGQV 
Sbjct: 634 AAVVRFLDENLSIIMEEPYKHKYPYDWRTKKPTIFRATEQWFASVEGFRQVAMTAIGQVT 693

Query: 568 WVPPQ 572
           W+P Q
Sbjct: 694 WIPAQ 698



 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 179/207 (86%), Positives = 190/207 (91%)

Query: 572  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
            +EAPGYGADVLRLWVSSVDYTGD MIG QVLRQMSDIYRKLRGTLRYLL NLHDW+  N+
Sbjct: 877  KEAPGYGADVLRLWVSSVDYTGDAMIGAQVLRQMSDIYRKLRGTLRYLLANLHDWKADNA 936

Query: 632  ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
            + Y DLPMID++ALFQLEN+VKNIRESYESYQFFKIFQIIQRF IVDLSNFYFDVAKDRL
Sbjct: 937  VPYCDLPMIDRHALFQLENVVKNIRESYESYQFFKIFQIIQRFAIVDLSNFYFDVAKDRL 996

Query: 692  YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
            Y GGTTSFTRRSCQTVL+AHLLSIVRVIAPILPHLAEDVWQNLPF YT EDGS AEFVFE
Sbjct: 997  YVGGTTSFTRRSCQTVLAAHLLSIVRVIAPILPHLAEDVWQNLPFQYTNEDGSIAEFVFE 1056

Query: 752  SKWPVLDEKWRTFPVGEIYFWGKILEV 778
            S+WP L+EKW TFP  EI FWGKILE+
Sbjct: 1057 SRWPALNEKWLTFPTEEIDFWGKILEL 1083



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 146/204 (71%), Positives = 168/204 (82%), Gaps = 2/204 (0%)

Query: 4   ILKSFASNSS-VSTPREATIAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLKFLS 62
           ++KS ASNSS + +P++A +A+ Q+SSY+VLS+RT SSFR   SV+L   RGSSS+   S
Sbjct: 3   LVKSLASNSSSLFSPKDARMAI-QASSYKVLSQRTASSFRSMNSVSLLYLRGSSSVHVPS 61

Query: 63  FLNVTCYSICSGDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRAN 122
            L    YS  S D   SSSKRRSRGPVMAAKKA+E  K+E+GRYKHTVDLPKT FGMRAN
Sbjct: 62  LLKTATYSSYSSDNSSSSSKRRSRGPVMAAKKASEAAKQEDGRYKHTVDLPKTAFGMRAN 121

Query: 123 ALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRY 182
           +  REPEI KLWDD+QVF RV D+N+G NF+LHDGPPYANG+LHMGHALNKILKDIINRY
Sbjct: 122 STSREPEIQKLWDDNQVFKRVVDRNNGGNFILHDGPPYANGDLHMGHALNKILKDIINRY 181

Query: 183 KLLQNYKVRYVPGWDCHGLPIELK 206
           KLLQNYKV YVPGWDCHGLPIELK
Sbjct: 182 KLLQNYKVHYVPGWDCHGLPIELK 205


>gi|428305737|ref|YP_007142562.1| isoleucyl-tRNA synthetase [Crinalium epipsammum PCC 9333]
 gi|428247272|gb|AFZ13052.1| Isoleucyl-tRNA synthetase [Crinalium epipsammum PCC 9333]
          Length = 955

 Score =  627 bits (1616), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 295/471 (62%), Positives = 356/471 (75%), Gaps = 22/471 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK+TV+LPKT F MRANA+ REPEI K W + Q++ R++  N GE FVLHDGPPYA
Sbjct: 4   EPGSYKNTVNLPKTKFDMRANAVKREPEIQKFWAEEQIYERLSQNNPGELFVLHDGPPYA 63

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LH+GHALNKILKDIIN+Y+LL+  KVRYVPGWDCHGLPIELKVLQ++ +  +++LTP
Sbjct: 64  NGALHIGHALNKILKDIINKYQLLKGRKVRYVPGWDCHGLPIELKVLQNMKQQERQELTP 123

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
             LR KA +FA  TV  Q   FKRYGVW DW+NPYLTL P YEAAQI VFGQM L+GYIY
Sbjct: 124 LTLRRKAKEFALKTVDEQRQGFKRYGVWGDWDNPYLTLKPSYEAAQIGVFGQMVLKGYIY 183

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH+SRS+Y  F +     + +  L +FLP+L +A+
Sbjct: 184 RGLKPVHWSPSSKTALAEAELEYPEGHISRSLYVAFPVTKLGDAVNESLQQFLPNLSVAI 243

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN AV+VN +L+YAVV ++                       ++  ++IVA
Sbjct: 244 WTTTPWTIPANLAVSVNPELKYAVVAVEG----------------------EQSNYLIVA 281

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLV TL    G    +K T+ G DLEN  Y HP+ +R+ PVVIGGDY+TTESGTGLVHT
Sbjct: 282 ADLVETLSETLGKNFQVKATVVGKDLENTTYRHPLFDRESPVVIGGDYVTTESGTGLVHT 341

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPILSPVD +G FTEEAG+F+GL+VLG+GN AV+  L E  +L+
Sbjct: 342 APGHGQEDYLVGQRYGLPILSPVDADGNFTEEAGQFAGLNVLGEGNTAVITALTEVGALL 401

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y HKYPYDWRTKKPTI+RATEQWFASVEGFR  A+ AI  VKW+P Q
Sbjct: 402 KEEAYSHKYPYDWRTKKPTIYRATEQWFASVEGFRDEALSAIASVKWIPSQ 452



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 94/191 (49%), Positives = 135/191 (70%), Gaps = 7/191 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           +E P YGADVLRLWVSSVDY+ DV I   +L+QM D+  K+R T RYLLG+LHD+    +
Sbjct: 631 KEEPPYGADVLRLWVSSVDYSSDVSISKSILKQMGDVRGKIRNTARYLLGSLHDFDPAKD 690

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++ Y+ LP +D+Y L ++  + K++ E+++SYQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 691 AVPYEQLPELDRYLLHRMTEVFKDVTEAFDSYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 750

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RRSCQTV++  L ++ + IAP+L H+AED+WQ +P+A      +  + VF
Sbjct: 751 LYISAENSLRRRSCQTVMAIALENLAKAIAPVLSHMAEDIWQYIPYA------TPCKSVF 804

Query: 751 ESKWPVLDEKW 761
           E+ W  L+E+W
Sbjct: 805 EAGWVNLEEEW 815


>gi|307153063|ref|YP_003888447.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306983291|gb|ADN15172.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 972

 Score =  625 bits (1612), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 295/471 (62%), Positives = 361/471 (76%), Gaps = 20/471 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LP+T F MRANA+ REPE+ K W ++Q++ +++  N G+ F+LHDGPPYA
Sbjct: 16  EAKSYKDTVNLPQTNFDMRANAVKREPELQKYWAENQIYEKLSQNNAGDIFILHDGPPYA 75

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LHMGHALNKILKDIIN+YKLL+ YKVRYVPGWDCHGLPIELKVLQS+ +  ++DLTP
Sbjct: 76  NGTLHMGHALNKILKDIINKYKLLRGYKVRYVPGWDCHGLPIELKVLQSMKQKEREDLTP 135

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            KLR KA  FA +T K Q  SFKR+GVW DW +PYLTL P+YEAAQI VFG+M+L+GYIY
Sbjct: 136 LKLRHKARDFALSTQKEQCESFKRFGVWGDWEHPYLTLTPDYEAAQIGVFGEMALKGYIY 195

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRS+YAVF +  A  +   +L  +L DLG+A+
Sbjct: 196 RGLKPVHWSPSSQTALAEAELEYPEGHTSRSVYAVFPVTKASDTAQKVLKPYLKDLGVAI 255

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVA+N +L YAVVE        S  P  K              + IVA
Sbjct: 256 WTTTPWTLPGNLAVALNPELTYAVVE--------SGKPICKHK------------YFIVA 295

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLV  L A + T L +K TL G DLE+  Y HP+ +R+  ++IGGDY+TTESGTGLVHT
Sbjct: 296 ADLVDKLAATFDTPLTVKATLKGKDLEHTTYRHPLFDRESEILIGGDYVTTESGTGLVHT 355

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLP+LSPVD++G FT EAG+F+GL+VL D N A++K L+E+ +L+
Sbjct: 356 APGHGQEDYIVGQRYGLPVLSPVDEKGNFTAEAGQFAGLNVLKDANEAIIKELEEKGALL 415

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY+HKYPYDWRTKKPTIFRATEQWFASVEGFR  A++AI  V W+P Q
Sbjct: 416 KEEPYQHKYPYDWRTKKPTIFRATEQWFASVEGFRDTALEAIKTVTWIPAQ 466



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 95/192 (49%), Positives = 132/192 (68%), Gaps = 7/192 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+ DI  K+R T R+LLGNLHD+    N
Sbjct: 645 KKEPPYGADVLRLWVSSVDYSSDVPIGQNMLKQLGDIRNKIRNTARFLLGNLHDFDPEKN 704

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y DLP +DQY L ++  +   + +++ES+QFF+ FQ++Q F +VDLSNFY D+AKDR
Sbjct: 705 AVAYQDLPELDQYMLHRITEVFNEVTDAFESFQFFRFFQVVQNFCVVDLSNFYLDIAKDR 764

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +  RRSCQTVL+  + ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 765 LYISDVDALRRRSCQTVLAVAVENLAKAIAPVLCHLAEDIWQFLPYK------TPYNSVF 818

Query: 751 ESKWPVLDEKWR 762
           ES W  L   W+
Sbjct: 819 ESGWVTLKPDWK 830


>gi|434390951|ref|YP_007125898.1| Isoleucyl-tRNA synthetase [Gloeocapsa sp. PCC 7428]
 gi|428262792|gb|AFZ28738.1| Isoleucyl-tRNA synthetase [Gloeocapsa sp. PCC 7428]
          Length = 1093

 Score =  625 bits (1612), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 301/469 (64%), Positives = 360/469 (76%), Gaps = 22/469 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LPKT+F MRANA  REPEI K W ++Q++ R++  N GE FVLHDGPPYA
Sbjct: 3   EPGSYKDTVNLPKTSFDMRANATKREPEIQKFWAENQIYDRLSQNNPGELFVLHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LH+GHALNKILKDIINRY+LLQ  KVRYVPGWDCHGLPIELKVLQ++    +++LTP
Sbjct: 63  NGALHLGHALNKILKDIINRYQLLQGRKVRYVPGWDCHGLPIELKVLQNMKAAERQNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA +FA A V+ Q  SF+RYGVW D++NPYLTL PEYEAAQI VFGQM L+GYIY
Sbjct: 123 LELRRKAKEFALAAVEEQSKSFQRYGVWGDFDNPYLTLKPEYEAAQIGVFGQMVLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRS+YA F  V+    T+  L EFLP L +A+
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHTSRSLYAAFP-VTHLSETASALGEFLPHLSVAI 241

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN AVAVN +L YAVV++ +                     +Q K ++IVA
Sbjct: 242 WTTTPWTIPANLAVAVNPELTYAVVQVAN--------------------HEQPK-YLIVA 280

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLV  L     + L IK  ++G DLE+  Y HP+ +R+ PVVIGGDY+TTESGTGLVHT
Sbjct: 281 ADLVERLSQILASDLAIKAKVSGKDLEHTTYRHPLYDRESPVVIGGDYVTTESGTGLVHT 340

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQ+DY+   +YGLPIL+PVD +G FT EAG+F+GL+VLGDGN AV+  L    +L+
Sbjct: 341 APGHGQDDYIVGQRYGLPILAPVDADGNFTAEAGQFAGLNVLGDGNAAVIDALSAAGALL 400

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            EEPY HKYPYDWRTKKPTIFRATEQWFASVEGFR AA+ AI +VKW+P
Sbjct: 401 KEEPYVHKYPYDWRTKKPTIFRATEQWFASVEGFRDAALKAISEVKWIP 449



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 98/193 (50%), Positives = 133/193 (68%), Gaps = 7/193 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           +E P YGADVLRLWVSSVDYT D  +   +L+Q+S+ YRK+R T R+LLGNLHD+    +
Sbjct: 630 KEEPAYGADVLRLWVSSVDYTSDAPLSKNILKQLSEAYRKIRNTARFLLGNLHDFDPSEH 689

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           S+ Y  LP +D+Y L ++  + K++ E++E+YQFF+ FQ +Q F +VDLSNFY D AKDR
Sbjct: 690 SVPYAQLPELDRYMLHRMTEVFKDVTEAFETYQFFRFFQTVQNFCVVDLSNFYLDTAKDR 749

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +F RRSCQTVLS  L ++ R IAP+L H+AED+WQ LP+       +  + VF
Sbjct: 750 LYISAPDAFRRRSCQTVLSVALENLARAIAPVLCHMAEDIWQQLPYP------TPYKSVF 803

Query: 751 ESKWPVLDEKWRT 763
           E+ W  LD +W  
Sbjct: 804 EAGWVQLDSQWHN 816


>gi|119511990|ref|ZP_01631086.1| isoleucyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119463341|gb|EAW44282.1| isoleucyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 958

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 300/471 (63%), Positives = 353/471 (74%), Gaps = 18/471 (3%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LPKT F MRANA+ REPEI K W ++ ++ R++ +N GE F+LHDGPPYA
Sbjct: 3   EPGSYKDTVNLPKTKFDMRANAIKREPEIQKFWAENNIYDRLSQENPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRY+LLQ  KVRYV GWDCHGLPIELKVLQ++    ++ LTP
Sbjct: 63  NGSLHIGHALNKILKDIINRYQLLQGRKVRYVAGWDCHGLPIELKVLQNMKSAERQSLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            KLR KA +FA ATV  Q+  FKRYG+W DW +PYLTL PEYEAAQI VFGQM L+GYIY
Sbjct: 123 LKLRQKAKEFALATVDDQLECFKRYGIWGDWEHPYLTLKPEYEAAQIGVFGQMVLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSIYA F +     +   +L EFLP LG+A+
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHTSRSIYAAFPITGLSEAAKPVLGEFLPHLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVAVN  L Y+VVE+       S   A  +S            F+IVA
Sbjct: 243 WTTTPWTIPGNLAVAVNGDLNYSVVEV-------SRRDAEAQSE-----------FLIVA 284

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLV  L A    +L ++ T  G  LE+  Y HP+ +R+ PVV+GGDYITTESGTGLVHT
Sbjct: 285 TDLVERLAATLDAELAVRATFKGQVLEHSTYRHPLFDRESPVVVGGDYITTESGTGLVHT 344

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPIL+PVDD G FT+EAG+F+GL+VLGDGN AV+  L    SL+
Sbjct: 345 APGHGQEDYIVGQRYGLPILAPVDDNGDFTQEAGEFAGLNVLGDGNQAVIDALTAAGSLL 404

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y HKYPYDWRTKKPTIFRATEQWFASV GFR  A+ AI  VKW+P Q
Sbjct: 405 KEEAYAHKYPYDWRTKKPTIFRATEQWFASVAGFRDEALKAIASVKWIPAQ 455



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/208 (43%), Positives = 137/208 (65%), Gaps = 9/208 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGAD+LRLW SSVDY+ DV +G  +++QM+D+  K+R T R+LLG+L D+  V +
Sbjct: 634 KKEPPYGADILRLWASSVDYSSDVRLGGTIIKQMNDVRGKIRNTARFLLGSLDDFDPVKD 693

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++   DLP +D+Y L ++  + + +  +++S+QFF+ FQ +  F +VDLSNFY DVAKDR
Sbjct: 694 AVPLSDLPELDRYMLHRMTEVFEEVTAAFDSFQFFRFFQTVLNFCVVDLSNFYLDVAKDR 753

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +F RRSCQTVL   L ++ R IAP+L H AED+WQ +P+       +  + VF
Sbjct: 754 LYISSPDAFRRRSCQTVLQIALENLARAIAPVLCHTAEDIWQFIPYE------TPYKSVF 807

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           E+ W  +D+ W    + E  FW +I ++
Sbjct: 808 EAGWVQVDKTWLNPELAE--FWQQIRKI 833


>gi|428779761|ref|YP_007171547.1| isoleucyl-tRNA synthetase [Dactylococcopsis salina PCC 8305]
 gi|428694040|gb|AFZ50190.1| isoleucyl-tRNA synthetase [Dactylococcopsis salina PCC 8305]
          Length = 960

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 301/467 (64%), Positives = 353/467 (75%), Gaps = 20/467 (4%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK T++LPKT F MRANA  REPEI + W   QV+  ++ +N  E FVLHDGPPYANG+L
Sbjct: 7   YKDTINLPKTDFAMRANAKQREPEIQEFWQQEQVYETLSQQNPKEVFVLHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNKILKDIIN+YKLLQ YKVRYVPGWDCHGLPIELKVLQ+++E  + +LTP KLR
Sbjct: 67  HMGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQNIEEKDRANLTPIKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KAAKFA  T+  Q   FKRYGVW DW NPYLTL+P YEAAQI VFG+M+L+GYIYRG K
Sbjct: 127 KKAAKFANKTIDTQRKGFKRYGVWGDWENPYLTLNPAYEAAQIGVFGEMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH S SIYAVF + +        L ++L  LG+A+WTTT
Sbjct: 187 PVHWSPSSKTALAEAELEYPEGHTSPSIYAVFPVTALGEDAKASLGDYLFSLGVAIWTTT 246

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVAVN  L YAVVE      GD     N   R           ++IVA+DLV
Sbjct: 247 PWTIPGNLAVAVNPDLNYAVVE----RSGD-----NNDCR-----------YLIVAADLV 286

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L A     L +K TL G  LE+C+Y HP+ +R+  ++IGGDYITTESGTGLVHTAPGH
Sbjct: 287 EKLSATLEASLTVKTTLPGKALEHCKYRHPLFDRESEILIGGDYITTESGTGLVHTAPGH 346

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDYV  ++YGLPILSPVD++G FT+EAGKF+GL VL  GN A+++ L    SL+ +EP
Sbjct: 347 GQEDYVVGMRYGLPILSPVDEQGTFTQEAGKFAGLAVLDGGNDAIIEALQTANSLLKQEP 406

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR AA+ AI QV W+P Q
Sbjct: 407 YQHKYPYDWRTKKPTIFRATEQWFASVEGFRDAALSAIEQVNWLPQQ 453



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 95/208 (45%), Positives = 138/208 (66%), Gaps = 9/208 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           ++ P YGAD+LRLW SSVDY+ DV IG  +L+Q++D YRK+R T+R+LLGNLHD+    +
Sbjct: 632 KQEPAYGADILRLWASSVDYSADVPIGQGILKQLADAYRKIRNTVRFLLGNLHDFDPKYH 691

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            +  ++LP +D+Y L +   + + I  ++E Y+FF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 GVLDENLPSLDRYMLHRTSEVFEEITAAFEEYEFFRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY   T S  RRSCQTVL+  + ++ R IAP+L H AED+WQN+P+       +  + VF
Sbjct: 752 LYISDTNSLRRRSCQTVLAIIVENLARAIAPVLCHTAEDIWQNIPYP------TPHKSVF 805

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEV 778
            S W   +  W+   +GE   W K+ E+
Sbjct: 806 ASGWIPKETGWKNPELGE--SWSKLREI 831


>gi|428214247|ref|YP_007087391.1| isoleucyl-tRNA synthetase [Oscillatoria acuminata PCC 6304]
 gi|428002628|gb|AFY83471.1| Isoleucyl-tRNA synthetase [Oscillatoria acuminata PCC 6304]
          Length = 1145

 Score =  623 bits (1606), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 297/471 (63%), Positives = 356/471 (75%), Gaps = 19/471 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LPKT F MRANA+ REPE+ K W DHQ++ R++  N GE F+LHDGPPYA
Sbjct: 3   EAKTYKDTVNLPKTGFDMRANAVKREPELQKFWADHQIYERLSQNNPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LHMGHALNK+LKDIIN+YKLL+ ++VRYVPGWDCHGLPIELKVLQ++    +++LTP
Sbjct: 63  NGSLHMGHALNKVLKDIINKYKLLRGHQVRYVPGWDCHGLPIELKVLQAMKSKERQNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
             LR KA +FA  TV+ Q  SFKRYG+W DW NPYLTL PEYEAAQI VFG+M L+GYIY
Sbjct: 123 LTLRQKAQEFALKTVEEQKESFKRYGIWGDWENPYLTLKPEYEAAQIGVFGKMVLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG+KPVHWSPSS+TALAEAELEYPEGH SRSIYA F++     + S  L  ++  L + +
Sbjct: 183 RGRKPVHWSPSSQTALAEAELEYPEGHTSRSIYAAFQITKLADTASD-LKAYMKQLWVGI 241

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AV+VN +L+YAVVE  +  E     PA+ K             F+IVA
Sbjct: 242 WTTTPWTIPGNLAVSVNPQLEYAVVETAADYE-----PASGK-------------FLIVA 283

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++LV  L    GT L +K  + G DLE C Y HP+ +R  PVVIGGDY+TTESGTGLVHT
Sbjct: 284 AELVDRLSETLGTSLTVKAKIKGKDLEGCEYKHPLCDRTSPVVIGGDYVTTESGTGLVHT 343

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG EDY    +YGLPIL+PVD  G FTEEAG+F+GL+VL +GN AV++ L    SL+
Sbjct: 344 APGHGLEDYQVGQRYGLPILAPVDGNGNFTEEAGEFAGLNVLDEGNTAVIEALKTAKSLL 403

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY HKYPYDWRTKKPTIFRATEQWFASV+GFR+ AM AI +VKWVP Q
Sbjct: 404 KEEPYVHKYPYDWRTKKPTIFRATEQWFASVDGFREEAMKAISEVKWVPAQ 454



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 93/192 (48%), Positives = 136/192 (70%), Gaps = 7/192 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T R+LLGNL D+    +
Sbjct: 633 KQEPPYGADVLRLWVSSVDYSSDVPIGKNILKQLSDVYRKIRNTARFLLGNLEDFDPAKD 692

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++ Y++LP +D+Y L ++  I   + +++ESYQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 693 AVPYEELPELDRYMLHRMTEIFAEVTDAFESYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 752

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +  RRSCQTVL+  L ++ + +AP+L H+AED+WQNLP+       +    VF
Sbjct: 753 LYISAVDAKRRRSCQTVLAIALENLAKAVAPVLCHIAEDIWQNLPYP------TPYNSVF 806

Query: 751 ESKWPVLDEKWR 762
           E+ W  +++ W+
Sbjct: 807 EAGWVQVEDHWK 818


>gi|428226290|ref|YP_007110387.1| isoleucyl-tRNA synthetase [Geitlerinema sp. PCC 7407]
 gi|427986191|gb|AFY67335.1| Isoleucyl-tRNA synthetase [Geitlerinema sp. PCC 7407]
          Length = 959

 Score =  623 bits (1606), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 294/471 (62%), Positives = 354/471 (75%), Gaps = 20/471 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LPKT F MRANA+ REPE+ K W DH+++  ++  N G  F+LHDGPPYA
Sbjct: 3   EAKSYKDTVNLPKTKFDMRANAVKREPELQKFWADHEIYETLSQNNPGAPFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIIN+Y+LLQ  K+ YVPGWDCHGLPIELKVLQ++  + ++ LTP
Sbjct: 63  NGSLHIGHALNKILKDIINKYQLLQGRKISYVPGWDCHGLPIELKVLQAMSSEERQGLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
             LR KA KFA  TV+ Q  SFKRYGVW DW++PYLTL PEYEAAQ+ VFGQM L+G+IY
Sbjct: 123 ITLREKAKKFALKTVEEQRKSFKRYGVWGDWDHPYLTLSPEYEAAQLGVFGQMVLKGHIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG+KPVHWSPSS+TALAEAELEYPEGH SRS++A F M    P+    L E+LP+LG+A+
Sbjct: 183 RGRKPVHWSPSSKTALAEAELEYPEGHTSRSLFAAFPMTGLAPAVQEDLGEYLPELGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN AV+VN  L+YAVVE                      L    + ++IVA
Sbjct: 243 WTTTPWTIPANLAVSVNPDLKYAVVEAD--------------------LPQVNRKYLIVA 282

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLV  L   +G  L +K  + G  LE+  Y HP+ +R+ PVVIGGDY+TTESGTGLVHT
Sbjct: 283 ADLVERLSETFGKALTVKAVVPGKALEHSTYRHPLFDRESPVVIGGDYVTTESGTGLVHT 342

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPI SPVDD G FTEEAG F+G +VLG+GN AVV+ L    SL+
Sbjct: 343 APGHGQEDYMVGQRYGLPIFSPVDDNGHFTEEAGPFAGQNVLGEGNGAVVEALKAAGSLL 402

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY HKYPYDWRTKKPTIFRATEQWFASV+GFR+ A+ AI QVKW+P Q
Sbjct: 403 KEEPYVHKYPYDWRTKKPTIFRATEQWFASVDGFREDALKAIAQVKWIPAQ 453



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 97/218 (44%), Positives = 150/218 (68%), Gaps = 9/218 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           +E P YGADVLRLWVSSVDY+ DV +G  +L+Q++D+YRK+R T R+LLGNLHD+    +
Sbjct: 632 KEDPPYGADVLRLWVSSVDYSSDVPLGKNILKQLADVYRKIRNTARFLLGNLHDFEPAQH 691

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++ YD+LP +D+Y L ++  +   +++++E++QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 AVPYDELPELDRYMLHRMTEVFAEVKDAFETFQFFRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +F RRSCQTVL+  +  + R IAP+L H+AED+WQ+LP+       +  + VF
Sbjct: 752 LYISAPDAFRRRSCQTVLAQAIECLARAIAPVLCHMAEDIWQSLPYT------TPYKSVF 805

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNET 788
           ++ W  LD++W+   + +   W ++  +   V  + ET
Sbjct: 806 QAGWVHLDDRWQQPEIAQ--RWQELRRIRTEVNKVMET 841


>gi|332712037|ref|ZP_08431967.1| isoleucyl-tRNA synthetase [Moorea producens 3L]
 gi|332349365|gb|EGJ28975.1| isoleucyl-tRNA synthetase [Moorea producens 3L]
          Length = 959

 Score =  622 bits (1605), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 297/467 (63%), Positives = 352/467 (75%), Gaps = 20/467 (4%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LPKT F MRANA+ REPE+ K W +  ++ R++  N GE FVLHDGPPYANG+L
Sbjct: 7   YKDTVNLPKTEFNMRANAIKREPELQKFWAEQTIYERLSQNNPGEIFVLHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNK+LKDIIN+Y+LLQ  KVRYVPGWDCHGLPIELKVLQ++  + ++ LTP KLR
Sbjct: 67  HMGHALNKVLKDIINKYQLLQGRKVRYVPGWDCHGLPIELKVLQAMKLEERQQLTPIKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA KFA  TV+ Q   F+RYGVW DW NPYLTL+P+YEAAQI VFGQM L+GYIYRG K
Sbjct: 127 RKAKKFALKTVEQQSKGFQRYGVWGDWENPYLTLNPQYEAAQIGVFGQMVLKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH S SIYA F +  A P    +L  FLP+LG+A+WTTT
Sbjct: 187 PVHWSPSSKTALAEAELEYPEGHTSPSIYAAFPITKAGPGIKEILEPFLPNLGVAIWTTT 246

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVAVN +L YAVVE  S                    +  +  F++VA+DLV
Sbjct: 247 PWTIPGNLAVAVNPELTYAVVEDGS--------------------QTNQFQFLLVAADLV 286

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L A   T L +K T+ G  LE+C Y HP+ +R+  +VIGGDYITTESGTGLVHTAPGH
Sbjct: 287 ERLSATLETPLTVKTTVKGEALEDCTYQHPLFDRESKIVIGGDYITTESGTGLVHTAPGH 346

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDY    +YGLPILSPVD +GKFT EAG+F+GL+VL D N A+++ L+   SL+ E P
Sbjct: 347 GQEDYGVGQRYGLPILSPVDADGKFTAEAGQFAGLNVLKDANPAIIEALNTAGSLLKEVP 406

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           Y HKYPYDWRTKKPTIFRATEQWFASVEGFR  A++AI  VKW+P Q
Sbjct: 407 YVHKYPYDWRTKKPTIFRATEQWFASVEGFRDEAINAIASVKWIPAQ 453



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 94/193 (48%), Positives = 135/193 (69%), Gaps = 7/193 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV I   +L+Q++D+YRK+R T R+LLGNLHD+    +
Sbjct: 632 KKEPPYGADVLRLWVSSVDYSSDVPISQSILKQLADVYRKIRNTARFLLGNLHDFDPAKD 691

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            +   +LP +D+Y L ++  + +++ +++ESYQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 KVPVQELPELDRYMLHRITEVFEDVTDAFESYQFFRFFQSVQNFCVVDLSNFYLDIAKDR 751

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RRSCQTVL   + ++ + IAP+L H+AED+WQ LP+        + E VF
Sbjct: 752 LYISAPNSPRRRSCQTVLQIAVENLAKAIAPVLCHMAEDIWQYLPYQ------KSHESVF 805

Query: 751 ESKWPVLDEKWRT 763
           ES W  L+E+W+ 
Sbjct: 806 ESGWVKLEEQWKN 818


>gi|218441945|ref|YP_002380274.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|254782386|sp|B7KFT1.1|SYI_CYAP7 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|218174673|gb|ACK73406.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 959

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 295/471 (62%), Positives = 361/471 (76%), Gaps = 20/471 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LP+T F MRANA+ REPE+ K W ++Q++  +++ N G+ F+LHDGPPYA
Sbjct: 3   EAKSYKDTVNLPQTKFDMRANAVKREPELQKFWAENQIYETLSENNPGDIFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LHMGHALNK LKDIIN+YKL + YK RYVPGWDCHGLPIELKVLQS+ +  ++DLTP
Sbjct: 63  NGSLHMGHALNKTLKDIINKYKLQRGYKARYVPGWDCHGLPIELKVLQSMKQKEREDLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            KLR KA  FA +T K Q  SF+R+GVW DW +PYLTL P+YEAAQI VFGQM+L+GYIY
Sbjct: 123 LKLRHKARDFALSTQKEQSESFQRFGVWGDWEHPYLTLTPDYEAAQIGVFGQMALKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRS+YAVF +  A  +   +L  +L DLG+A+
Sbjct: 183 RGLKPVHWSPSSQTALAEAELEYPEGHTSRSVYAVFPITKASDTAKKVLTPYLKDLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVA+N  L YAVVE        S  P         V K Q   + IVA
Sbjct: 243 WTTTPWTLPGNLAVALNPDLTYAVVE--------SGKP---------VCKHQ---YFIVA 282

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLV  L A + T L +K TL G DLE+  Y HP+ +R+  ++IGGDY+TTESGTGLVHT
Sbjct: 283 ADLVDKLSATFETPLTVKATLKGEDLEHTTYRHPLFDRESEILIGGDYVTTESGTGLVHT 342

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLP+LSPVD++G FT EAG+F+GL+VL D N A++K L+E+ +L+
Sbjct: 343 APGHGQEDYIVGQRYGLPVLSPVDEKGNFTSEAGQFAGLNVLKDANEAIIKELEEKGALL 402

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY+HKYPYDWRTKKPTIFRATEQWFASVEGFR  A++AI  V W+PPQ
Sbjct: 403 KEEPYQHKYPYDWRTKKPTIFRATEQWFASVEGFRDTALEAIKNVTWIPPQ 453



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 92/192 (47%), Positives = 135/192 (70%), Gaps = 7/192 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+ D+  K+R T R+LLGNLHD+    +
Sbjct: 632 KKEPAYGADVLRLWVSSVDYSSDVPIGQNILKQLVDVRNKIRNTARFLLGNLHDFDPEKD 691

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y+DLP +D+Y L ++  +   + E++E++QFF+ FQ++Q F +VDLSNFY D+AKDR
Sbjct: 692 TVAYEDLPELDRYMLHRITEVFTEVTEAFETFQFFRFFQVVQNFCVVDLSNFYLDIAKDR 751

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +  RRSCQTVL   L ++ + IAP+L HLAED+WQ LP+       +  + VF
Sbjct: 752 LYISDPNNLRRRSCQTVLKVALENLAKSIAPVLCHLAEDIWQFLPYK------TPYKSVF 805

Query: 751 ESKWPVLDEKWR 762
           E+ W  L+ +W+
Sbjct: 806 EAGWVELESEWK 817


>gi|282897045|ref|ZP_06305047.1| Isoleucyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
 gi|281197697|gb|EFA72591.1| Isoleucyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
          Length = 965

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 289/471 (61%), Positives = 362/471 (76%), Gaps = 17/471 (3%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G+YK TV+LP+T F MRANA+ REPEI   W ++ ++ R++ +N GE F+LHDGPPYA
Sbjct: 3   ETGKYKDTVNLPQTDFDMRANAIKREPEIQTFWAENNIYSRLSQENPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRY+LLQ  KVRYV GWDCHGLPIELKVLQ++    +++LTP
Sbjct: 63  NGSLHIGHALNKILKDIINRYQLLQGRKVRYVAGWDCHGLPIELKVLQAMKSPERQNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA  FA A V+ Q++SFKRYG+W+DW +PYLTL PEYEAAQI VFG+M L+GYIY
Sbjct: 123 LQLRQKAKDFALAAVREQLSSFKRYGIWSDWEHPYLTLQPEYEAAQIGVFGRMYLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGHVSRSIY VF ++        +L  F+PDL LAV
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHVSRSIYTVFPVIKVSEKLKSVLAPFMPDLALAV 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N A+AVN  L YAVVE+   L  +++   +K              ++IV+
Sbjct: 243 WTTTPWTIPGNLAIAVNGSLNYAVVEV---LPNENSLFHHK--------------YLIVS 285

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLVP L       L ++ + +G DLE+  Y HP+ +R+ PV+IGGDYITT+SGTGLVHT
Sbjct: 286 TDLVPRLTTILNVDLRVQASFSGEDLEHTIYRHPLFDRESPVLIGGDYITTDSGTGLVHT 345

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPIL+PVD+ G FT++AGKF+GL+VLG+GN A++  L +  SL+
Sbjct: 346 APGHGQEDYIVGQRYGLPILAPVDENGNFTQDAGKFAGLNVLGEGNQAIIDALAQAGSLL 405

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y+HKYPYDWRT KPTIFRATEQWFASV GFR+ A+ AI  V+W+PPQ
Sbjct: 406 KEEAYQHKYPYDWRTNKPTIFRATEQWFASVHGFREDALKAIASVRWIPPQ 456



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 90/190 (47%), Positives = 133/190 (70%), Gaps = 7/190 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P YGADVLRLWVSSVDY+GDV +G  +++Q++DI  K+R T R+LLG+LHD+    N++S
Sbjct: 638 PAYGADVLRLWVSSVDYSGDVRLGGNIIKQLADIRNKIRNTARFLLGSLHDFDPEKNAVS 697

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            + LP +D+Y L ++  +   +  ++E++QFF+ FQ +Q F +VDLSNFY D+AKDRLY 
Sbjct: 698 LEKLPDLDRYMLHRIYEVFSEVTAAFETFQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYI 757

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
               SF RRSCQT+L   L ++VR IAP+L H AED+WQ +P++       + + VF++ 
Sbjct: 758 SAADSFRRRSCQTILHIALENLVRAIAPVLCHTAEDIWQFIPYS------RSEKSVFQAG 811

Query: 754 WPVLDEKWRT 763
           W  +D +W+ 
Sbjct: 812 WVKIDPQWKN 821


>gi|282901331|ref|ZP_06309257.1| Isoleucyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
 gi|281193826|gb|EFA68797.1| Isoleucyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
          Length = 963

 Score =  621 bits (1602), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 291/471 (61%), Positives = 360/471 (76%), Gaps = 17/471 (3%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LP+T F MRANA+ REPEI   W ++ ++ R+A +N GE F+LHDGPPYA
Sbjct: 3   ETGNYKDTVNLPQTDFDMRANAIKREPEIQTFWAENNIYSRLAQENPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRY+LLQ  KVRYV GWDCHGLPIELKVLQ++    +++LTP
Sbjct: 63  NGSLHIGHALNKILKDIINRYQLLQGRKVRYVAGWDCHGLPIELKVLQAMKSPERQNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA  FA   V+ Q+ SFKRYG+W+DW++PYLTL PEYEAAQI VFG+M L+GYIY
Sbjct: 123 LQLRQKAKDFALVAVREQLNSFKRYGIWSDWDHPYLTLQPEYEAAQIGVFGRMYLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGHVSRSIY VF ++        +L  F+PDL LAV
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHVSRSIYTVFPVIKVSEKLKSVLAPFMPDLALAV 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N A+AVN  L YAVVE+   L  +++   +K              ++IVA
Sbjct: 243 WTTTPWTIPGNLAIAVNGSLNYAVVEV---LPNETSLFHHK--------------YLIVA 285

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLVP L       L ++ + AG DLE+  Y HP+ +R+ PV+IGGDYITT+SGTGLVHT
Sbjct: 286 TDLVPRLTTILNVDLRVQVSFAGEDLEHTIYRHPLFDRESPVLIGGDYITTDSGTGLVHT 345

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPIL+PVD+ G FT++AGKF+GL+VLG+GN A++  L +  SL+
Sbjct: 346 APGHGQEDYIVGQRYGLPILAPVDENGNFTQDAGKFAGLNVLGEGNQAIIDALAQAGSLL 405

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y+HKYPYDWRT KPTIFRATEQWFASV GFR+ A+ AI  V+W+PPQ
Sbjct: 406 KEEAYQHKYPYDWRTNKPTIFRATEQWFASVHGFREDALKAIASVRWIPPQ 456



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 90/190 (47%), Positives = 133/190 (70%), Gaps = 7/190 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P YGADVLRLWVSSVDY+GDV +G  +++Q++DI  K+R T R+LLG+LHD+    N++S
Sbjct: 638 PAYGADVLRLWVSSVDYSGDVRLGGNIIKQLADIRNKIRNTARFLLGSLHDFDPEKNAVS 697

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            + LP +D+Y L ++  +   +  ++E++QFF+ FQ +Q F +VDLSNFY D+AKDRLY 
Sbjct: 698 LEKLPELDRYMLHRIYEVFSEVTAAFETFQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYI 757

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
               SF RRSCQT+L   L ++VR IAP+L H AED+WQ +P++       + + VF++ 
Sbjct: 758 SAADSFRRRSCQTILHIALENLVRAIAPVLCHTAEDIWQFIPYS------RSEKSVFQAG 811

Query: 754 WPVLDEKWRT 763
           W  +D +W+ 
Sbjct: 812 WVKVDPQWKN 821


>gi|427737553|ref|YP_007057097.1| isoleucyl-tRNA synthetase [Rivularia sp. PCC 7116]
 gi|427372594|gb|AFY56550.1| Isoleucyl-tRNA synthetase [Rivularia sp. PCC 7116]
          Length = 962

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 297/477 (62%), Positives = 350/477 (73%), Gaps = 25/477 (5%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LPKT F MRANA  REPEI K W +++V+ R++ +N GE F+LHDGPPYA
Sbjct: 3   ESGSYKKTVNLPKTKFDMRANATKREPEIQKFWAENKVYERLSQENPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRYK+LQ  K+ YVPGWDCHGLPIELKVLQ++    +++LTP
Sbjct: 63  NGSLHIGHALNKILKDIINRYKILQGRKISYVPGWDCHGLPIELKVLQTMKSSERQELTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            KLR KA  FA   V  Q  SFKRYGVW DW +PYLT +P+YEA QI VFG M L+GYIY
Sbjct: 123 LKLRNKAKDFAWEAVNEQRESFKRYGVWGDWEHPYLTSNPQYEAEQIAVFGDMFLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH S SIYA F M +   +    L+EFLPDLG+A+
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHTSPSIYAAFPMTNLADAAKDKLSEFLPDLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVAVN  L YAVVE+++L   D                     ++IVA
Sbjct: 243 WTTTPWTIPGNLAVAVNPDLNYAVVEVENLSAVDFK-------------------YLIVA 283

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DL   L   +G KL +K T  G +LEN  Y HP+ +R+ PV+IGGDYITTESGTGLVHT
Sbjct: 284 ADLAERLSETFGAKLTVKATFKGKELENSTYRHPLFDRESPVIIGGDYITTESGTGLVHT 343

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLG------DGNVAVVKYLD 515
           APGHGQEDY+   KY LPIL+PVD  GKFTEEAGKF GL V+G      +GN A++  L 
Sbjct: 344 APGHGQEDYIVGQKYNLPILAPVDANGKFTEEAGKFVGLKVVGAKDQISEGNQAIIDALT 403

Query: 516 EQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           E  SLI  EPY HKYPYDWRTKKPTIFRATEQWFASVE FR+ A++ I  V+W+P Q
Sbjct: 404 EAKSLIKHEPYAHKYPYDWRTKKPTIFRATEQWFASVEKFRETALEQIKSVQWIPAQ 460



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 95/208 (45%), Positives = 137/208 (65%), Gaps = 9/208 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDYT DV IG   L+Q+ DI  K+R T R+LLGNLHD+    +
Sbjct: 639 KQEPAYGADVLRLWVSSVDYTNDVGIGKNTLKQIMDIRNKIRNTTRFLLGNLHDFNPETD 698

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++++++L  ID+Y L ++  +   I  +YE++QF + FQ +Q F IVDLSNFY DV KDR
Sbjct: 699 AVAFEELAEIDKYMLHRMTEVFTEITNAYETFQFSRFFQAVQNFCIVDLSNFYLDVGKDR 758

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY        RRSCQTV+   L ++ + IAP+L H+AED+WQ +P+       +  + VF
Sbjct: 759 LYISSENGSRRRSCQTVMQIALENLTKAIAPVLAHMAEDIWQFIPYE------TPQKSVF 812

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           E+ W  L++KW+   +  + FW KI ++
Sbjct: 813 EAGWVQLEDKWKNPDI--VKFWDKIRQI 838


>gi|443310851|ref|ZP_21040490.1| Isoleucyl-tRNA synthetase [Synechocystis sp. PCC 7509]
 gi|442779116|gb|ELR89370.1| Isoleucyl-tRNA synthetase [Synechocystis sp. PCC 7509]
          Length = 954

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 292/471 (61%), Positives = 351/471 (74%), Gaps = 23/471 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E+GRYK TV+LP+T F MRANA  REPEI K W D+Q++ R++  N GE FVLHDGPPYA
Sbjct: 3   EQGRYKDTVNLPQTKFDMRANATKREPEIQKFWADNQIYDRLSQNNPGEIFVLHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LH+GHALNKILKDII+RY+LL+  K RYVPGWDCHGLPIELKVLQ++ +  + +LTP
Sbjct: 63  NGALHIGHALNKILKDIISRYQLLKGRKARYVPGWDCHGLPIELKVLQNMKQSERLNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA  FA   V  Q   F+R+GVW DW +PYLT+ P+YEAAQI VFGQM L+GYIY
Sbjct: 123 LELRHKARDFALKAVGEQSQGFQRFGVWGDWEHPYLTMTPDYEAAQIGVFGQMVLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH S SIYA F M S   S    L  +LP L +A+
Sbjct: 183 RGFKPVHWSPSSKTALAEAELEYPEGHTSSSIYAAFAMTSLSESAKSALEPYLPQLSVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN AV+VN +L Y VVEI S                          ++IVA
Sbjct: 243 WTTTPWTIPANLAVSVNPRLDYVVVEIGS-----------------------SSKYLIVA 279

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLV TL AK  T+L +K T+ G DLE+  Y HP+ +R+ P++IGG+Y+TTESGTGLVHT
Sbjct: 280 ADLVGTLSAKLETQLTVKATVKGKDLEHSTYRHPLFDRESPILIGGEYVTTESGTGLVHT 339

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPIL+PVD+ G FTEEAGKF GL+VLG+GN AV++ L E  SL+
Sbjct: 340 APGHGQEDYIVGQRYGLPILAPVDENGNFTEEAGKFVGLNVLGEGNTAVIEALTEAGSLL 399

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
             E Y HKYPYDWRTKKPTIFRATEQWFASV GFR+ A+  +  V+W+PPQ
Sbjct: 400 KMEAYAHKYPYDWRTKKPTIFRATEQWFASVAGFREEALKVLASVQWIPPQ 450



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 93/205 (45%), Positives = 135/205 (65%), Gaps = 9/205 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           +E P YGADVLRLWVSSVDY+ DV I   +L+QM D+  K+R T R+LLGNLHD+    +
Sbjct: 629 KEEPPYGADVLRLWVSSVDYSTDVSISKNILKQMGDVRSKIRNTARFLLGNLHDFDPSKD 688

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            + Y+ LP +D+Y L ++  +  ++ ++++ +QFF+ FQ +Q F  +DLSNFY D+ KDR
Sbjct: 689 VVPYEQLPELDRYMLHRITEVFTDVTQAFDRFQFFRFFQAVQNFCTIDLSNFYLDIGKDR 748

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +  RRSCQTVL   L ++ R IAP+L H AED+WQ LP++      +  + VF
Sbjct: 749 LYISAENTLRRRSCQTVLHVALENLTRAIAPVLCHTAEDIWQFLPYS------TPYKSVF 802

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKI 775
           E+ W  LDEKW+   +  + FW ++
Sbjct: 803 EAGWVQLDEKWQKPEL--LAFWQQL 825


>gi|428775198|ref|YP_007166985.1| isoleucyl-tRNA synthetase [Halothece sp. PCC 7418]
 gi|428689477|gb|AFZ42771.1| Isoleucyl-tRNA synthetase [Halothece sp. PCC 7418]
          Length = 960

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 298/482 (61%), Positives = 357/482 (74%), Gaps = 25/482 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK T++LPKT F MRANA  REPEI   W   Q++   + +N  + FVLHDGPPYANG+L
Sbjct: 7   YKDTINLPKTDFAMRANAKQREPEIQAFWQQEQIYETRSQQNPKDVFVLHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNKILKDIIN+YK+LQ YKVRYVPGWDCHGLPIELKVLQ+++E  +  LTP KLR
Sbjct: 67  HMGHALNKILKDIINKYKILQGYKVRYVPGWDCHGLPIELKVLQNIEEKDRAHLTPIKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KAAKFA  T+  Q   FKRYGVW DW+NPYLTL+P YEAAQI VFG+M+L+GYIYRG K
Sbjct: 127 KKAAKFAHKTIDEQREGFKRYGVWGDWDNPYLTLNPAYEAAQIGVFGEMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH S SIYAVF + +   +    L E+   LG+A+WTTT
Sbjct: 187 PVHWSPSSKTALAEAELEYPEGHTSPSIYAVFPVTALGEAAQATLGEYASSLGVAIWTTT 246

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVAVN  L YAVVE                       +D +  + IVA++LV
Sbjct: 247 PWTIPGNLAVAVNPDLTYAVVEQSG--------------------EDAQCQYWIVAAELV 286

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L A  G  L +K TL G  LE+C+Y HP+ +R+  V+IGGDYITT+SGTGLVHTAPGH
Sbjct: 287 EKLSATLGQSLTVKTTLPGKALEHCQYRHPLFDRESKVLIGGDYITTDSGTGLVHTAPGH 346

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDYV  ++YGLPILSPVD++G FTEEAG+F+GL+VL  GN AV++ L    SL+ +EP
Sbjct: 347 GQEDYVVGMRYGLPILSPVDEQGTFTEEAGQFAGLEVLNGGNDAVIEALQAANSLLKQEP 406

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLW 585
           Y+HKYPYDWR+KKPTIFRATEQWFASVEGFR+AA+ AI  V W+P Q     G + +R  
Sbjct: 407 YQHKYPYDWRSKKPTIFRATEQWFASVEGFREAALMAISGVNWLPKQ-----GENRIRAM 461

Query: 586 VS 587
           VS
Sbjct: 462 VS 463



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 94/208 (45%), Positives = 135/208 (64%), Gaps = 9/208 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGAD+LRLW SSVDY+ DV IG  +L+Q++D YRK+R T+R+LLGNLHD+    +
Sbjct: 632 KKEPAYGADILRLWASSVDYSADVPIGQGILKQLADAYRKIRNTVRFLLGNLHDFDPKTD 691

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            ++Y+ LP +DQY L +   + + I  ++E ++FF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 GVAYEQLPSLDQYMLHRTGEVFEEITAAFEEFEFFRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RRSCQTVL+  + ++ R IAP+L H AED+WQN+P+    +       VF
Sbjct: 752 LYISDANSLRRRSCQTVLAIIVENLARAIAPVLCHTAEDIWQNIPYPVPHKS------VF 805

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEV 778
            S W      W+   + E   W K+ +V
Sbjct: 806 ASGWIPQQTDWKNTDLAE--SWSKLRQV 831


>gi|411117277|ref|ZP_11389764.1| Isoleucyl-tRNA synthetase [Oscillatoriales cyanobacterium JSC-12]
 gi|410713380|gb|EKQ70881.1| Isoleucyl-tRNA synthetase [Oscillatoriales cyanobacterium JSC-12]
          Length = 964

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 294/472 (62%), Positives = 363/472 (76%), Gaps = 20/472 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LPKT F MRANA+ REPEI + W ++Q++ R++  N GE FVLHDGPPYA
Sbjct: 5   EPGSYKDTVNLPKTDFDMRANAVKREPEIQRFWAENQIYDRLSQTNPGEIFVLHDGPPYA 64

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LHMGHA+NK+LKDIIN+Y+LL+  KVRYVPGWDCHGLPIELKVLQ++  + +++LTP
Sbjct: 65  NGSLHMGHAMNKVLKDIINKYQLLKGRKVRYVPGWDCHGLPIELKVLQAMKPEQRRELTP 124

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
             LR KA +FA  TV  Q  SFKRYGVW DW++PYLTL+PEYEAAQI VFGQM L+GYIY
Sbjct: 125 LTLRQKAKEFALKTVDEQRESFKRYGVWGDWDHPYLTLEPEYEAAQIGVFGQMVLKGYIY 184

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG+KPVHWSPSS+TALAEAELEYPEGH SRS+YA F + + P +     + FL +LG+A+
Sbjct: 185 RGRKPVHWSPSSKTALAEAELEYPEGHTSRSLYAAFEVTNVPMALQTPFDPFLGELGVAI 244

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N  V+VN  L YAVVE+     G++A        PG      +  +++VA
Sbjct: 245 WTTTPWTIPGNLGVSVNPDLVYAVVEV-----GENA--------PG------RFKYLLVA 285

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            DLV +L    GT L ++ T+ G  LE+  Y HP+ +R+  V+IGGDY+TT+SGTGLVHT
Sbjct: 286 KDLVESLSDTLGTSLTVRATIMGRLLEHITYRHPLFDRESEVLIGGDYVTTDSGTGLVHT 345

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSL 520
           APGHGQEDY   ++YGLPIL+PVDD+G FT EAG  F+GL+VLGDGN AV+  L E  SL
Sbjct: 346 APGHGQEDYQVGMRYGLPILAPVDDDGNFTAEAGPLFAGLNVLGDGNGAVITALQEAGSL 405

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           + EEPY+HKYPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI +V+W+P Q
Sbjct: 406 LKEEPYQHKYPYDWRTKKPTIFRATEQWFASVEGFRDEALKAIAEVRWIPAQ 457



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 95/191 (49%), Positives = 134/191 (70%), Gaps = 7/191 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           +E P YGADVLRLWVSSVDYT DV+IG  +L+Q+ D+  K+R T R+LLGNLHD+    +
Sbjct: 636 KEEPPYGADVLRLWVSSVDYTSDVLIGKNILKQLGDVRGKIRNTARFLLGNLHDFNPATD 695

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            I+YD LP +D+Y L ++  +  ++ +++E++QF++ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 696 VITYDQLPELDRYMLHRITEVFNDVTDAFETFQFYRFFQTVQNFCVVDLSNFYLDIAKDR 755

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RRSCQTV+   L ++ R IAP+L HLAED+WQ LP+A      +  + VF
Sbjct: 756 LYISTANSPRRRSCQTVMWVALENLARAIAPVLSHLAEDIWQFLPYA------TPHKSVF 809

Query: 751 ESKWPVLDEKW 761
           E+ W  L+ +W
Sbjct: 810 EAGWVKLEPEW 820


>gi|298493101|ref|YP_003723278.1| isoleucyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298235019|gb|ADI66155.1| isoleucyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 960

 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 292/471 (61%), Positives = 357/471 (75%), Gaps = 16/471 (3%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G+YK TV+LPKT F MRANA+ REPEI K W+++ ++ R++++N GE F+LHDGPPYA
Sbjct: 3   ETGKYKDTVNLPKTNFDMRANAIKREPEIQKFWEENNIYSRLSEENSGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LH+GHALNKILKDIINRY+L +  K+ Y+PGWDCHGLPIELKVLQ++ +  +++LTP
Sbjct: 63  NGQLHIGHALNKILKDIINRYQLFKGSKICYIPGWDCHGLPIELKVLQNMKQAERQNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA +FA  TV  Q  SFKRYGVW DW++PYLTL PEYEAAQI VFG+M L+GYIY
Sbjct: 123 LQLRQKAKEFALKTVDEQRESFKRYGVWGDWDHPYLTLKPEYEAAQIGVFGEMFLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGHVSRSIY  F +          L+  LPDLG+AV
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHVSRSIYTAFPVTKVAEGLKSSLDGLLPDLGVAV 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVAVN  L+YAVVE+               SR    ++   K ++IVA
Sbjct: 243 WTTTPWTIPGNLAVAVNGALEYAVVEV---------------SRTDTAMQRGFK-YLIVA 286

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++LV  L A    +L +K T  G DLE+  Y HP+ +R+  VV+GGDYITT+SGTGLVHT
Sbjct: 287 AELVERLVAILDAELTVKATFPGKDLEHTTYRHPLFDRESQVVVGGDYITTDSGTGLVHT 346

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPIL+PVD  G FT++AGKFSGL+VL +GN A++  L E  SL+
Sbjct: 347 APGHGQEDYIVGQRYGLPILAPVDGSGNFTDDAGKFSGLNVLSEGNQAIIDALTEVGSLL 406

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y HKYPYDWRTKKPTIFRATEQWFASV GFR+ A+ AI  V+W+PPQ
Sbjct: 407 KEEAYPHKYPYDWRTKKPTIFRATEQWFASVAGFREDALKAISSVRWIPPQ 457



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 95/202 (47%), Positives = 139/202 (68%), Gaps = 9/202 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
            + P YGADVLRLWVSSVDY+GDV +G ++++Q++D+  K+R T R+LLG+LHD+    +
Sbjct: 636 NQQPAYGADVLRLWVSSVDYSGDVRLGSKIIKQLADVRNKIRNTARFLLGSLHDFDPKQD 695

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            +++DDLP +D+Y L ++  +   + E+++S+QFF+ FQ +Q F +VDLSNFY DVAKDR
Sbjct: 696 GVAFDDLPDLDKYMLHRIREVFNEVTEAFDSFQFFRFFQTVQNFCVVDLSNFYLDVAKDR 755

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTVL   L ++ R IAP+L H AED+WQ +P+       +  + VF
Sbjct: 756 LYISAADSFRRRSCQTVLQIALENLARAIAPVLCHTAEDIWQFIPYK------TPYKSVF 809

Query: 751 ESKWPVLDEKWRTFPVGEIYFW 772
           E+ W  +D++W    + E  FW
Sbjct: 810 EAGWVQVDDEWENEDLAE--FW 829


>gi|254409885|ref|ZP_05023665.1| isoleucyl-tRNA synthetase [Coleofasciculus chthonoplastes PCC 7420]
 gi|196182921|gb|EDX77905.1| isoleucyl-tRNA synthetase [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1163

 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 295/493 (59%), Positives = 356/493 (72%), Gaps = 25/493 (5%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LP+T F MRANA+ REPE+ K W D Q++ R++  N G++F+LHDGPPYA
Sbjct: 3   EAKSYKDTVNLPQTQFSMRANAVKREPELQKYWQDQQIYQRLSQTNPGDSFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LH+GHALNKILKDIIN+YKLLQ YKVRYVPGWDCHGLPIELKVLQ++D + ++ LTP
Sbjct: 63  NGALHIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQAMDAEERQALTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            KLR KA KFA  TV  Q   F+RYGVW DW++PYLTL PEYEAAQI VFGQM L+GYIY
Sbjct: 123 IKLRRKARKFALKTVDQQRQGFQRYGVWGDWDHPYLTLTPEYEAAQIGVFGQMVLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRS+YA F +  A  S    L  +L DLG+A+
Sbjct: 183 RGMKPVHWSPSSQTALAEAELEYPEGHTSRSLYAAFPLTKATDSVEAKLKPYLVDLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNV-------LKDQK 394
           WTTTPWT+P N AVAVN +L YA+VE+    E  ++  A K S+P           +D+ 
Sbjct: 243 WTTTPWTIPGNLAVAVNPELTYAIVEVS---EKSASQEAEKSSKPSKTKAKGFAPTQDED 299

Query: 395 KV---------------FIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNR 439
            +               ++IVA++LV  L       L +K TL G +L+ C Y HP+ +R
Sbjct: 300 SLESESADFDTEAEGFKYLIVAAELVERLSQTLDKDLTVKTTLKGQELDQCTYRHPLFDR 359

Query: 440 QCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSG 499
           + P+VIGGDYITTESGTGLVHTAPGHGQEDY+   +Y LPI+SPVD  G FT EAG F+G
Sbjct: 360 ESPIVIGGDYITTESGTGLVHTAPGHGQEDYIVGQRYNLPIISPVDGNGDFTTEAGPFAG 419

Query: 500 LDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAA 559
           L+VL + N AV+  L E  S + EE Y HKYPYDWRTK+PTIFRATEQWFASV+GFR+  
Sbjct: 420 LNVLRNANPAVIDALKEAGSFLKEENYIHKYPYDWRTKEPTIFRATEQWFASVDGFREEV 479

Query: 560 MDAIGQVKWVPPQ 572
           M AI  V W+P Q
Sbjct: 480 MKAIQSVNWIPSQ 492



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 100/192 (52%), Positives = 136/192 (70%), Gaps = 7/192 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGAD+LRLWVSSVDY+ DV IG  +L+Q+SDIYRK+R T R+LLGNLHD+    N
Sbjct: 671 KQEPPYGADMLRLWVSSVDYSVDVPIGQGILKQLSDIYRKIRNTARFLLGNLHDFDPAKN 730

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y+ LP +D+Y L ++  +   + E+++SYQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 731 AVAYEQLPELDRYMLHRITEVFGEVTEAFDSYQFFRFFQTVQNFCVVDLSNFYLDMAKDR 790

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RRSCQTVL+  L ++ R IAP+L H AED+WQ LP+       +  + VF
Sbjct: 791 LYISHPDSVRRRSCQTVLAIALENLARSIAPVLCHTAEDIWQYLPYP------TPYKSVF 844

Query: 751 ESKWPVLDEKWR 762
           ES W  LDE W+
Sbjct: 845 ESGWVQLDETWK 856


>gi|428202541|ref|YP_007081130.1| isoleucyl-tRNA synthetase [Pleurocapsa sp. PCC 7327]
 gi|427979973|gb|AFY77573.1| Isoleucyl-tRNA synthetase [Pleurocapsa sp. PCC 7327]
          Length = 959

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 295/471 (62%), Positives = 351/471 (74%), Gaps = 20/471 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E  + K TV+LPKT F MRANA+ REPEI K W +++++  ++  N GE FVLHDGPPYA
Sbjct: 3   EVKKLKDTVNLPKTKFDMRANAVKREPEIQKFWAENRIYETLSQNNPGEIFVLHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LHMGHALNKILKDIIN+YKLL+ YKVRYVPGWDCHGLPIELKVLQ++  + ++ LTP
Sbjct: 63  NGDLHMGHALNKILKDIINKYKLLRGYKVRYVPGWDCHGLPIELKVLQAMKSEEREGLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            KLR KA  FA  T K Q   FKRYGVW DW +PYLTL P+YEAAQI VFGQM+L+GYIY
Sbjct: 123 LKLRRKARDFALKTQKEQCEGFKRYGVWGDWEHPYLTLTPDYEAAQIGVFGQMALKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSIY  F +  A  +   +L  F+P+LG+A+
Sbjct: 183 RGLKPVHWSPSSQTALAEAELEYPEGHTSRSIYVTFPITQAGEAAKEVLTPFIPNLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVA+N  L YAVVE  S L                     +  ++IVA
Sbjct: 243 WTTTPWTLPGNLAVALNPDLTYAVVEADSSL--------------------CQHRYLIVA 282

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            DLV  L   +G  L +K T+ G DLE+  Y HP+ +R   ++IGGDY+TTESGTGLVHT
Sbjct: 283 KDLVERLSKTFGVNLTVKATILGKDLEHTTYRHPLYDRLGEILIGGDYVTTESGTGLVHT 342

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQED++   +YGLPILSPVDD+G FT EAG+F+GL+VL D N A+VK L E+  L+
Sbjct: 343 APGHGQEDFIVGQRYGLPILSPVDDKGNFTAEAGQFAGLNVLKDANEAIVKELQEKGVLL 402

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY HKYPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  VKW+P Q
Sbjct: 403 KEEPYTHKYPYDWRTKKPTIFRATEQWFASVEGFRDEALKAIKSVKWIPAQ 453



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/192 (48%), Positives = 136/192 (70%), Gaps = 7/192 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGN- 630
           Q+ P YGADVLRLWVSSVDY+ DV +GP +L+Q++DI  K+R T R+LLGNL+D+   N 
Sbjct: 632 QQEPPYGADVLRLWVSSVDYSADVPLGPNLLKQLNDIRGKIRNTARFLLGNLYDFDPENH 691

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++SY+ LP +D+Y L ++  +   + E++E++QFF+ FQ++Q F +VDLSNFY D+AKDR
Sbjct: 692 AVSYEQLPELDKYMLHRITEVFAEVTEAFETFQFFRFFQVVQNFCVVDLSNFYLDIAKDR 751

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S+ RRSCQT+L+  + ++   IAP+L HLAED+WQ LP+       +  + VF
Sbjct: 752 LYISAPDSWRRRSCQTILAVAVENLAVAIAPVLCHLAEDIWQFLPYK------TPYKSVF 805

Query: 751 ESKWPVLDEKWR 762
           ES W    ++W+
Sbjct: 806 ESGWVKTKDEWK 817


>gi|218247493|ref|YP_002372864.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|254782387|sp|B7K5H5.1|SYI_CYAP8 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|218167971|gb|ACK66708.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 959

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 293/471 (62%), Positives = 356/471 (75%), Gaps = 20/471 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LP+T F MRANA+ REPEI + W ++ ++ +++  N  + F+LHDGPPYA
Sbjct: 3   EPKSYKDTVNLPQTDFSMRANAVQREPEIQQFWTENCIYEQLSQNNPEDLFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LHMGHALNK LKDIIN+YKLL+ +KVRYVPGWDCHGLPIELKVLQS+  + ++ LTP
Sbjct: 63  NGSLHMGHALNKTLKDIINKYKLLRGHKVRYVPGWDCHGLPIELKVLQSMKSEEREGLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            KLR KA  FA  T + Q   FKRYGVW DW NPYLTL PEYEAAQI VFGQM+L+GYIY
Sbjct: 123 LKLRRKARDFALKTQQEQAEGFKRYGVWGDWENPYLTLTPEYEAAQIGVFGQMALKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSSRTALAEAELEYPEGH S+SI+A F ++ +      +L+ FL +LG+A+
Sbjct: 183 RGLKPVHWSPSSRTALAEAELEYPEGHTSQSIFAAFPIIKSSKDAQEILDPFLSNLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVA+N +L YA+VE  S                 N+   Q   +IIVA
Sbjct: 243 WTTTPWTLPGNLAVALNPELTYAIVEQTS-----------------NLCNYQ---YIIVA 282

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLV  L A + T+L +K TL G  LE+  Y HP+ +R+  +VIGGDY+TTESGTGLVHT
Sbjct: 283 ADLVERLSATFSTELTVKATLPGQILEHTIYRHPLYDRESEIVIGGDYVTTESGTGLVHT 342

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGL +LSPVDD G FTEEAG+FSGL+VL D N A++  L  + SL+
Sbjct: 343 APGHGQEDYIVGQRYGLQVLSPVDDAGNFTEEAGQFSGLNVLKDANQAIINELKNKGSLL 402

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY HKYPYDWRTKKPTIFRATEQWFASVEGFR+AA++AI  V W+PPQ
Sbjct: 403 KEEPYLHKYPYDWRTKKPTIFRATEQWFASVEGFREAALEAIKSVNWIPPQ 453



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 99/208 (47%), Positives = 141/208 (67%), Gaps = 9/208 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T R+LLGNLHD+    +
Sbjct: 632 KQEPPYGADVLRLWVSSVDYSSDVPIGQTILKQLSDVYRKIRNTARFLLGNLHDFDPEKD 691

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++SYD LP +DQY L ++  +   + +++E +QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 TVSYDQLPELDQYMLHRITEVFTEVTDAFEKFQFFRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY   T S  RRSCQTVL   + S+ + IAP+L H+AED+WQ LP+       +  + VF
Sbjct: 752 LYISDTNSLRRRSCQTVLKVAVESLAKAIAPVLCHMAEDIWQFLPYK------TPYQSVF 805

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEV 778
            S W  + ++W    +     WGK+ ++
Sbjct: 806 ASGWVEMQKQWERPEL--TASWGKLRQI 831


>gi|434396655|ref|YP_007130659.1| Isoleucyl-tRNA synthetase [Stanieria cyanosphaera PCC 7437]
 gi|428267752|gb|AFZ33693.1| Isoleucyl-tRNA synthetase [Stanieria cyanosphaera PCC 7437]
          Length = 958

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 293/467 (62%), Positives = 354/467 (75%), Gaps = 20/467 (4%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+T F MRANA  REPE+ + W ++Q++ +++  N  + F+LHDGPPYANG+L
Sbjct: 7   YKDTVNLPQTEFNMRANAKTREPELQQFWAENQIYEQLSQHNPNDLFILHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNKILKDIIN+YKLL+ +KV+YVPGWDCHGLPIELKVLQS+    ++ LTP KLR
Sbjct: 67  HMGHALNKILKDIINKYKLLRGHKVKYVPGWDCHGLPIELKVLQSMKSKEREGLTPIKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA  T + Q   FKRYG+W DW +PYLT+ P+YEAAQI VFGQM+L+GYIYRG K
Sbjct: 127 HKARDFALKTQQEQCEGFKRYGIWGDWEHPYLTMTPDYEAAQIGVFGQMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS TALAEAELEYPEGH SRS+YA F ++S        L ++LP+L +A+WTTT
Sbjct: 187 PVHWSPSSHTALAEAELEYPEGHTSRSVYAAFPVISLGEDAKE-LEQYLPNLSVAIWTTT 245

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVAVN  L+YAVV++ ++ E                L  Q   ++IVA DLV
Sbjct: 246 PWTIPGNLAVAVNGDLEYAVVDVGTIHE----------------LSLQ---YLIVAKDLV 286

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L A  GT L +K TL G  LE   Y HP+ NR+  VVIGGDYITTESGTGLVHTAPGH
Sbjct: 287 EKLSATLGTNLTVKTTLLGKALEGITYRHPLFNRESKVVIGGDYITTESGTGLVHTAPGH 346

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDY+   KYGLPILSPVDD+G FTEEAGKF+GL+VL  GN A+++ L +  SL+ EEP
Sbjct: 347 GQEDYIVGQKYGLPILSPVDDKGYFTEEAGKFAGLNVLNGGNEAIIEALKDAGSLLKEEP 406

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A+ AI  V+W+P Q
Sbjct: 407 YQHKYPYDWRTKKPTIFRATEQWFASVEGFREEALKAISSVQWIPAQ 453



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 98/208 (47%), Positives = 147/208 (70%), Gaps = 9/208 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+ DIYRK+R T R+LLGNLHD+    +
Sbjct: 631 KQEPPYGADVLRLWVSSVDYSSDVPIGQNILKQLGDIYRKIRNTARFLLGNLHDFNPETD 690

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y DLP +D+Y L ++  +  ++ E++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 691 AVAYADLPELDKYMLHRMTEVFADVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDIAKDR 750

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTVL+  + S+ + IAP+L H+AED+WQ++P+       ++   VF
Sbjct: 751 LYISDPNSFRRRSCQTVLAIAVESLAKAIAPVLSHMAEDIWQSIPYE------TSYRSVF 804

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           ++ W  + ++W+   + +  FW KI ++
Sbjct: 805 QAGWVEMKDEWKKPELNQ--FWTKIRQL 830


>gi|257061171|ref|YP_003139059.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256591337|gb|ACV02224.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 959

 Score =  613 bits (1582), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 292/471 (61%), Positives = 356/471 (75%), Gaps = 20/471 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LP+T F MRANA+ REPEI + W ++ ++ +++  N  + F+LHDGPPYA
Sbjct: 3   EPKSYKDTVNLPQTDFSMRANAVQREPEIQQFWTENCIYEQLSQNNPEDLFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LHMGHALNK LKDIIN+YKLL+ +KVRYVPGWDCHGLPIELKVLQS+  + ++ LTP
Sbjct: 63  NGSLHMGHALNKTLKDIINKYKLLRGHKVRYVPGWDCHGLPIELKVLQSMKSEEREGLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            KLR KA  FA  T + Q   FKRYGVW DW NPYLTL PEYEAAQI VFGQM+L+GYIY
Sbjct: 123 LKLRRKARDFALKTQQEQAEGFKRYGVWGDWENPYLTLTPEYEAAQIGVFGQMALKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSSRTALAEAELEYPEGH S+SI+A F ++ +      +L+ FL +LG+A+
Sbjct: 183 RGLKPVHWSPSSRTALAEAELEYPEGHTSQSIFAAFPIIKSSKDAQEILDPFLSNLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVA+N +L YA+VE  S                 N+   Q   +IIVA
Sbjct: 243 WTTTPWTLPGNLAVALNPELTYAIVEQTS-----------------NLCNYQ---YIIVA 282

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLV  L A + T+L +K TL G  LE+  Y HP+ +R+  +VIGGDY+TTESGTGLVHT
Sbjct: 283 ADLVERLSATFSTELTVKATLPGQILEHTIYRHPLYDRESEIVIGGDYVTTESGTGLVHT 342

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGL +LSPVDD G FTEEAG+F+GL+VL D N A++  L  + SL+
Sbjct: 343 APGHGQEDYIVGQRYGLQVLSPVDDAGNFTEEAGQFAGLNVLKDANQAIINELKNKGSLL 402

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY HKYPYDWRTKKPTIFRATEQWFASVEGFR+AA++AI  V W+PPQ
Sbjct: 403 KEEPYLHKYPYDWRTKKPTIFRATEQWFASVEGFREAALEAIKAVTWIPPQ 453



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 99/208 (47%), Positives = 141/208 (67%), Gaps = 9/208 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T R+LLGNLHD+    N
Sbjct: 632 KQEPPYGADVLRLWVSSVDYSSDVPIGQTILKQLSDVYRKIRNTARFLLGNLHDFDPEKN 691

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++SY+ LP +DQY L ++  +   + +++E +QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 TVSYEQLPELDQYMLHRITEVFTEVTDAFEKFQFFRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY   T S  RRSCQTVL   + S+ + IAP+L H+AED+WQ LP+       +  + VF
Sbjct: 752 LYISDTNSLRRRSCQTVLKVAVESLAKAIAPVLCHMAEDIWQFLPYK------TPYQSVF 805

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEV 778
            S W  + ++W    +     WGK+ ++
Sbjct: 806 ASGWVEMQKQWERPEL--TASWGKLRQI 831


>gi|425453588|ref|ZP_18833345.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9807]
 gi|389801435|emb|CCI19402.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9807]
          Length = 952

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 291/465 (62%), Positives = 350/465 (75%), Gaps = 27/465 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+T F MRANA  REPEI K W D Q++ ++A  N  E F+LHDGPPYANG+L
Sbjct: 7   YKDTVNLPQTDFDMRANASKREPEIQKFWQDEQIYEKLAQNNPKELFILHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+YKLLQ YKVRYVPGWDCHGLPIELKVLQSL    K+ LTP KLR
Sbjct: 67  HIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQSLKSSEKEGLTPLKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA  T K Q   FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG K
Sbjct: 127 QKAHDFALQTQKEQCEGFKRYGVWGDWENPYLTLKPEYEAAQIAVFGKMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTT
Sbjct: 187 PVHWSPSSQTALAEAELEYPEGHTSRSVYVAFPITSV---STPVLTPFLPNLSVAIWTTT 243

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVA+N +L Y+VVE                          +  ++IVA+DLV
Sbjct: 244 PWTLPGNLAVALNPELNYSVVET------------------------SESNYLIVATDLV 279

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L   + T L IK T+ G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGH
Sbjct: 280 EKLADTFNTTLTIKATVKGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGH 339

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDY+   +YGLPILSPVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE 
Sbjct: 340 GQEDYIVGQRYGLPILSPVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEA 399

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A+DAI  V+W+P
Sbjct: 400 YQHKYPYDWRTKKPTIFRATEQWFASVEGFRELALDAIDSVRWIP 444



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/218 (44%), Positives = 140/218 (64%), Gaps = 9/218 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  + +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPLKD 684

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNET 788
           ES W  +   W    + +   W K  ++   V  + ET
Sbjct: 799 ESGWLNIAPAWNNRKLADK--WAKFRQLRTEVNKVMET 834


>gi|425446771|ref|ZP_18826770.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9443]
 gi|389732843|emb|CCI03274.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9443]
          Length = 952

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 291/465 (62%), Positives = 350/465 (75%), Gaps = 27/465 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+T F MRANA  REPEI K W D Q++ ++A  N  E F+LHDGPPYANG+L
Sbjct: 7   YKDTVNLPQTDFDMRANASKREPEIQKFWQDEQIYEKLAQNNPKELFILHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+YKLLQ YKVRYVPGWDCHGLPIELKVLQSL    K+ LTP KLR
Sbjct: 67  HIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQSLKSSEKEGLTPLKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA  T K Q   FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG K
Sbjct: 127 QKAHDFALQTQKEQCEGFKRYGVWGDWENPYLTLKPEYEAAQIAVFGKMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTT
Sbjct: 187 PVHWSPSSQTALAEAELEYPEGHTSRSVYVAFPITSV---STPVLTPFLPNLSVAIWTTT 243

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVA+N +L Y+VVE                          +  ++IVA+DLV
Sbjct: 244 PWTLPGNLAVALNPELNYSVVET------------------------SESNYLIVATDLV 279

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L   + T L IK T+ G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGH
Sbjct: 280 EKLADTFNTTLTIKATVKGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGH 339

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDY+   +YGLPILSPVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE 
Sbjct: 340 GQEDYIVGQRYGLPILSPVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEA 399

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A+DAI  V+W+P
Sbjct: 400 YQHKYPYDWRTKKPTIFRATEQWFASVEGFRELALDAIDSVRWIP 444



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/218 (44%), Positives = 141/218 (64%), Gaps = 9/218 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  + +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPLKD 684

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNET 788
           ES W  +D  W    + +   W K  ++   V  + ET
Sbjct: 799 ESGWLKIDPAWNNRELADK--WAKFRQLRTEVNKVMET 834


>gi|170078363|ref|YP_001735001.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169886032|gb|ACA99745.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 963

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 293/467 (62%), Positives = 344/467 (73%), Gaps = 20/467 (4%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LPKTTF MRANA  +EPEI K W +++++  +A  N  + F LHDGPPYANG+L
Sbjct: 7   YKDTVNLPKTTFNMRANAPQKEPEIQKFWQENRIYEDLAQNNPKDFFTLHDGPPYANGDL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNK+LKDIIN+YKLLQ YK  YVPGWDCHGLPIELKVLQ+L  DA+++LTP KLR
Sbjct: 67  HMGHALNKVLKDIINKYKLLQGYKTHYVPGWDCHGLPIELKVLQNLSADARQNLTPLKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA  T KAQ A F+RYGVW DW NPYLTL PEYEAAQI VFG M+L+GYIYRG K
Sbjct: 127 YKARDFALKTQKAQAAGFQRYGVWGDWENPYLTLTPEYEAAQIGVFGDMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH S+SIY  F +    P     L EF   LG+A+WTTT
Sbjct: 187 PVHWSPSSQTALAEAELEYPEGHTSQSIYVSFPITDLSPEAKATLGEFADSLGVAIWTTT 246

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVA+N  L+YAVVE       D +  A K              +++VA DL 
Sbjct: 247 PWTLPGNLAVAINPDLEYAVVET------DGSLCAQK--------------YLVVAKDLA 286

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
            +L   +   L +K +  G  LE+C Y HP+ NR  PVV GGDYITTESGTGLVHTAPGH
Sbjct: 287 ESLTKTFDAALTVKTSFKGEILEHCTYQHPLYNRTSPVVAGGDYITTESGTGLVHTAPGH 346

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDY+T  KYGLPILSPVD EG  TEEAG+F+GL+VL   N A++  L E+ +L+ +E 
Sbjct: 347 GQEDYITGQKYGLPILSPVDAEGTLTEEAGEFAGLNVLDGANNAIIAALTEKRALLKQEA 406

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V+W+P Q
Sbjct: 407 YQHKYPYDWRTKKPTIFRATEQWFASVEGFRDEALKAIKGVRWIPAQ 453



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 95/188 (50%), Positives = 133/188 (70%), Gaps = 7/188 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P YGADVLRLWVSSVDY+ DV IG  +L+Q++D+YRK+R T R+LLGN+HD+    ++++
Sbjct: 635 PPYGADVLRLWVSSVDYSSDVPIGQTILKQLADVYRKIRNTARFLLGNIHDFDPAKDAVA 694

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
           Y DLP +D+Y L Q  N+   + E++E +QFFK FQ +Q F +VDLSNFY D+AKDRLY 
Sbjct: 695 YSDLPELDKYILHQTHNVFTEVTEAFEEFQFFKFFQKVQNFCVVDLSNFYLDIAKDRLYI 754

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
               +  RRSCQTV++  L ++ + IAP+L H+AED+WQNLP+       +  + VF + 
Sbjct: 755 SDVNAPRRRSCQTVMAIILETLAKAIAPVLCHMAEDIWQNLPYE------TEHQSVFSAG 808

Query: 754 WPVLDEKW 761
           W  LD +W
Sbjct: 809 WYQLDPQW 816


>gi|425460311|ref|ZP_18839792.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9808]
 gi|389827009|emb|CCI22052.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9808]
          Length = 952

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 291/465 (62%), Positives = 350/465 (75%), Gaps = 27/465 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+T F MRANA  REPEI K W D Q++ ++A  N  E F+LHDGPPYANG+L
Sbjct: 7   YKDTVNLPQTDFDMRANASKREPEIQKFWQDEQIYEKLAQNNPKELFILHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+YKLLQ YKVRYVPGWDCHGLPIELKVLQSL    K+ LTP KLR
Sbjct: 67  HIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQSLKSSEKEGLTPLKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA  T K Q   FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG K
Sbjct: 127 QKAHDFALQTQKEQCEGFKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTT
Sbjct: 187 PVHWSPSSQTALAEAELEYPEGHTSRSVYVAFPITSV---STPVLTPFLPNLSVAIWTTT 243

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVA+N +L Y+VVE                          +  ++IVA+DLV
Sbjct: 244 PWTLPGNLAVALNPELNYSVVET------------------------SESNYLIVATDLV 279

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L   + T L IK T+ G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGH
Sbjct: 280 EKLADIFNTTLTIKATVKGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGH 339

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDY+   +YGLPILSPVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE 
Sbjct: 340 GQEDYIVGQRYGLPILSPVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEA 399

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A+DAI  V+W+P
Sbjct: 400 YQHKYPYDWRTKKPTIFRATEQWFASVEGFRELALDAIDSVRWIP 444



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 97/218 (44%), Positives = 141/218 (64%), Gaps = 9/218 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  + +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPLKD 684

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y++LP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEELPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNET 788
           ES W  +D  W    + +   W K  ++   V  + ET
Sbjct: 799 ESGWLNIDPAWNNRELADK--WSKFRQLRTEVNKVMET 834


>gi|425436914|ref|ZP_18817344.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9432]
 gi|389678274|emb|CCH92835.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9432]
          Length = 952

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 290/465 (62%), Positives = 350/465 (75%), Gaps = 27/465 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+T F MRANA  REPEI K W D Q++ ++A  N  E F+LHDGPPYANG+L
Sbjct: 7   YKDTVNLPQTDFDMRANASKREPEIQKFWQDEQIYEKLAQNNPKELFILHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+YKLLQ YKVRYVPGWDCHGLPIELKVLQSL    K+ LTP KLR
Sbjct: 67  HIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQSLKSSEKEGLTPLKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA  T K Q   FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG K
Sbjct: 127 QKAHDFALQTQKEQCEGFKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTT
Sbjct: 187 PVHWSPSSQTALAEAELEYPEGHTSRSVYVAFPITSV---STSVLTPFLPNLSVAIWTTT 243

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVA+N +L Y+VVE                          +  ++IVA+DLV
Sbjct: 244 PWTLPGNLAVALNPELNYSVVET------------------------SESNYLIVATDLV 279

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L   + T L IK T+ G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGH
Sbjct: 280 EKLADIFNTTLTIKATVKGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGH 339

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDY+   +YGLPILSPVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE 
Sbjct: 340 GQEDYIVGQRYGLPILSPVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEA 399

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 400 YQHKYPYDWRTKKPTIFRATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 97/218 (44%), Positives = 141/218 (64%), Gaps = 9/218 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  + +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPLKD 684

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y++LP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEELPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNET 788
           ES W  +D  W    + +   W K  ++   V  + ET
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMET 834


>gi|425450538|ref|ZP_18830363.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 7941]
 gi|389768600|emb|CCI06355.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 7941]
          Length = 952

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 290/465 (62%), Positives = 350/465 (75%), Gaps = 27/465 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+T F MRANA  REPEI K W D Q++ ++A  N  E F+LHDGPPYANG+L
Sbjct: 7   YKDTVNLPQTDFDMRANASKREPEIQKFWQDEQIYEKLAQNNPKELFILHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+YKLLQ YKVRYVPGWDCHGLPIELKVLQSL    K+ LTP KLR
Sbjct: 67  HIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQSLKSSEKEGLTPLKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA  T K Q   FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG K
Sbjct: 127 QKAHDFALQTQKEQCEGFKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTT
Sbjct: 187 PVHWSPSSQTALAEAELEYPEGHTSRSVYVAFPITSV---STPVLRPFLPNLSVAIWTTT 243

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVA+N +L Y+VVE                          +  ++IVA+DLV
Sbjct: 244 PWTLPGNLAVALNPELNYSVVET------------------------SESNYLIVATDLV 279

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L   + T L IK T+ G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGH
Sbjct: 280 EKLADTFNTTLTIKATVKGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGH 339

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDY+   +YGLPILSPVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE 
Sbjct: 340 GQEDYIVGQRYGLPILSPVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEA 399

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 400 YQHKYPYDWRTKKPTIFRATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/218 (44%), Positives = 141/218 (64%), Gaps = 9/218 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  + +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPLKD 684

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNET 788
           ES W  +D  W    + +   W K  ++   V  + ET
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMET 834


>gi|434388785|ref|YP_007099396.1| isoleucyl-tRNA synthetase [Chamaesiphon minutus PCC 6605]
 gi|428019775|gb|AFY95869.1| isoleucyl-tRNA synthetase [Chamaesiphon minutus PCC 6605]
          Length = 1143

 Score =  610 bits (1573), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 294/470 (62%), Positives = 353/470 (75%), Gaps = 17/470 (3%)

Query: 104 GRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANG 163
           G YK+TV+LP+T F MRANA++REPE+ K W D Q+F R++  N GE FVLHDGPPYANG
Sbjct: 5   GSYKNTVNLPQTKFDMRANAVIREPELQKFWADEQIFERLSQSNPGEIFVLHDGPPYANG 64

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           +LHMGHALNK LKDIINRY+LL+  KVRYVPGWDCHGLPIELKV+Q +    +  LTP +
Sbjct: 65  SLHMGHALNKTLKDIINRYQLLKGRKVRYVPGWDCHGLPIELKVIQDMKPAERLSLTPLE 124

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
           LR KAA FA  TV+ Q   FKR GVW +W+ PYLTL PEYEAAQ+ VFG+M L+GYIYRG
Sbjct: 125 LRQKAAAFALKTVEEQKIGFKRLGVWGEWDKPYLTLQPEYEAAQVGVFGKMVLEGYIYRG 184

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPVHWSPSS+TALAEAELEYPEGHVSRSI+A F++     +   +L  F  DL +A+WT
Sbjct: 185 LKPVHWSPSSKTALAEAELEYPEGHVSRSIFAAFKVTQVADAAKAILEPFQEDLAVAIWT 244

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN AVAVN  L YA+VE+        AAP + K        D  K + IVA+D
Sbjct: 245 TTPWTIPANLAVAVNPDLNYAIVEV--------AAPEDNKY-------DGCK-YAIVAAD 288

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           +V  L AK+   L  K  + G+DLE+  Y HP+ +R  PV+IGGDYITTESGTGLVHTAP
Sbjct: 289 MVEGLAAKFNLHLTTKAEIKGADLEHTTYKHPLYDRHSPVIIGGDYITTESGTGLVHTAP 348

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIM 522
           GHGQEDY+   KYGL IL+PVD +G FT+EAG+   G +VLGDGN  V++ L E  SLI 
Sbjct: 349 GHGQEDYIVGQKYGLSILAPVDGDGNFTDEAGELLKGANVLGDGNELVIQALIEARSLIK 408

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           EE Y HKYPYDWRTKKPTIFRATEQWFASV+GF++AA+ AI +V+W+P Q
Sbjct: 409 EESYAHKYPYDWRTKKPTIFRATEQWFASVKGFKEAALKAISEVEWIPAQ 458



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 98/191 (51%), Positives = 135/191 (70%), Gaps = 7/191 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           Q+ P YGAD++RLWVSSVDY  +V IGP +L+Q+SD  RK+R T R+LLGN+HD+    +
Sbjct: 637 QKDPAYGADLVRLWVSSVDYATEVRIGPNILKQLSDASRKIRNTARFLLGNIHDFDPAKD 696

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++ Y +L  +D+Y L ++  ++  I E+++ YQFFK FQ++Q F IVDLSNFY D+AKDR
Sbjct: 697 AVPYAELAELDRYMLHRMSVVLAEITEAFDRYQFFKFFQLVQNFCIVDLSNFYLDIAKDR 756

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY    TSF RRSCQTVL+  L ++ R IAP+L H+AED+WQ LP+       +  + VF
Sbjct: 757 LYISAPTSFRRRSCQTVLAIILENLTRAIAPVLCHMAEDIWQYLPYQ------TPYKSVF 810

Query: 751 ESKWPVLDEKW 761
           ES W  LD +W
Sbjct: 811 ESGWVKLDPQW 821


>gi|443322252|ref|ZP_21051279.1| Isoleucyl-tRNA synthetase [Gloeocapsa sp. PCC 73106]
 gi|442788042|gb|ELR97748.1| Isoleucyl-tRNA synthetase [Gloeocapsa sp. PCC 73106]
          Length = 948

 Score =  610 bits (1572), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 291/471 (61%), Positives = 346/471 (73%), Gaps = 23/471 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   Y++TV+LPKT F MRAN+  +EPEI K W +HQ++ RV+  N   +F+LHDGPPYA
Sbjct: 3   ESKSYQNTVNLPKTKFEMRANSAQKEPEIQKFWSEHQIYGRVSQNNSVGSFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LHMGHALNKILKDIIN+YKLL+ Y++ YVPGWDCHGLPIELKVLQ +    + +LTP
Sbjct: 63  NGSLHMGHALNKILKDIINKYKLLRGYEISYVPGWDCHGLPIELKVLQKMKPHERAELTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            KLR+ A +FA   V  Q   F+R+G+W DW NPYLTL P YEAAQI VFG+M+L+GYIY
Sbjct: 123 LKLRSLAREFALEAVAEQSKGFQRFGIWGDWENPYLTLTPAYEAAQIGVFGEMALKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS TALAEAELEYPEGH S SIYA F +V+       +L  F  DLG+A+
Sbjct: 183 RGLKPVHWSPSSGTALAEAELEYPEGHTSLSIYAAFPVVALSAQAEKILVPFAEDLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVAVNA+L YA+            A   K  R           +IIVA
Sbjct: 243 WTTTPWTIPGNLAVAVNAELTYAI------------ASGAKTHR-----------YIIVA 279

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLVP L     T L I  T+ G+DLE+CRY HP+ +R+  +VIGGDYITTESGTGLVHT
Sbjct: 280 ADLVPRLSQILETNLTIVATIKGADLEHCRYRHPLFDRESSIVIGGDYITTESGTGLVHT 339

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPILSPVDD+G FT EAG F+GL+VL D N A++  L E  SL+
Sbjct: 340 APGHGQEDYIVGQRYGLPILSPVDDQGNFTAEAGAFAGLNVLKDANSAIIAALAEAGSLL 399

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY HKYPYDWRTKKPTIFRATEQWFASVEGFR  A++AI  V W+P Q
Sbjct: 400 KEEPYVHKYPYDWRTKKPTIFRATEQWFASVEGFRTDALEAIASVTWIPSQ 450



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 94/191 (49%), Positives = 131/191 (68%), Gaps = 7/191 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGAD LRLWVSSVDY+ DV IG  +L+Q++D+YRK+R T R+LLGNL+D+     
Sbjct: 628 KQEPPYGADTLRLWVSSVDYSTDVRIGNNMLQQLADVYRKIRNTARFLLGNLYDFDPKSQ 687

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++ Y++LP +DQY L +   +   + E++ESYQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 688 AVPYEELPQLDQYMLHRATEVFTEVTEAFESYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 747

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RRSCQTV++  L ++ + IAP+L H+AED+WQ LP+          + VF
Sbjct: 748 LYISSLNSHRRRSCQTVIAIILENLAKAIAPVLSHMAEDIWQFLPYT------PPTKSVF 801

Query: 751 ESKWPVLDEKW 761
           ES W  L  +W
Sbjct: 802 ESGWIQLSPQW 812


>gi|443652604|ref|ZP_21130866.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa DIANCHI905]
 gi|159030898|emb|CAO88579.1| ileS [Microcystis aeruginosa PCC 7806]
 gi|443334274|gb|ELS48795.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa DIANCHI905]
          Length = 952

 Score =  609 bits (1571), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 290/465 (62%), Positives = 350/465 (75%), Gaps = 27/465 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+T F MRANA  REPEI K W D Q++ ++A  N  E F+LHDGPPYANG+L
Sbjct: 7   YKDTVNLPQTDFDMRANASKREPEIQKFWQDEQIYEKLAQNNPKELFILHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+YKLLQ YKVRYVPGWDCHGLPIELKVLQSL    K+ LTP KLR
Sbjct: 67  HIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQSLKSSEKEGLTPLKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA  T K Q   FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG K
Sbjct: 127 QKAHDFALQTQKEQCEGFKRYGVWGDWENPYLTLKPEYEAAQIAVFGKMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTT
Sbjct: 187 PVHWSPSSQTALAEAELEYPEGHTSRSVYVAFPITSV---STPVLTPFLPNLSVAIWTTT 243

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVA+N +L Y+VVE                          +  ++IVA+DLV
Sbjct: 244 PWTLPGNLAVALNPELNYSVVET------------------------SESNYLIVATDLV 279

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L   + T L IK T+ G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGH
Sbjct: 280 EKLADIFNTTLTIKATVKGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGH 339

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDY+   +YGLPILSPVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE 
Sbjct: 340 GQEDYIVGQRYGLPILSPVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEA 399

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 400 YQHKYPYDWRTKKPTIFRATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/218 (45%), Positives = 141/218 (64%), Gaps = 9/218 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  V +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPVKD 684

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNET 788
           ES W  +D  W    + +   W K  ++   V  + ET
Sbjct: 799 ESGWLNIDPAWNNRELADK--WSKFRQLRTEVNKVMET 834


>gi|425467689|ref|ZP_18846968.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9809]
 gi|389829462|emb|CCI29178.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9809]
          Length = 952

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 289/465 (62%), Positives = 349/465 (75%), Gaps = 27/465 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+T F MRANA  REPEI K W D Q++ ++A  N  E F+LHDGPPYANG+L
Sbjct: 7   YKDTVNLPQTDFDMRANASKREPEIQKFWQDEQIYEKLAQNNPKELFILHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+YKLLQ YKVRYVPGWDCHGLPIELKVLQSL    K+ LTP KLR
Sbjct: 67  HIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQSLKSSEKEGLTPLKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA  T K Q   FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG K
Sbjct: 127 QKAHDFALQTQKEQCEGFKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTT
Sbjct: 187 PVHWSPSSQTALAEAELEYPEGHTSRSVYVAFPITSV---STPVLTPFLPNLSVAIWTTT 243

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVA+N +L Y+VVE                          +  ++IVA+DLV
Sbjct: 244 PWTLPGNLAVALNPELNYSVVET------------------------SESNYLIVATDLV 279

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L   +   L IK T+ G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGH
Sbjct: 280 EKLADTFNRTLTIKATVKGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGH 339

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDY+   +YGLPILSPVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE 
Sbjct: 340 GQEDYIVGQRYGLPILSPVDDQGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEA 399

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 400 YQHKYPYDWRTKKPTIFRATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 97/218 (44%), Positives = 141/218 (64%), Gaps = 9/218 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  + +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPLKD 684

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y++LP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEELPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNET 788
           ES W  +D  W    + +   W K  ++   V  + ET
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMET 834


>gi|422302702|ref|ZP_16390062.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9806]
 gi|389788022|emb|CCI16652.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9806]
          Length = 952

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 290/465 (62%), Positives = 348/465 (74%), Gaps = 27/465 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+T F MRANA  REPEI K W D Q++ ++A  N  E F+LHDGPPYANG+L
Sbjct: 7   YKDTVNLPQTDFDMRANASKREPEIQKFWQDEQIYEKLAQNNPKELFILHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+YKLLQ YKVRYVPGWDCHGLPIELKVLQSL    K+ LTP KLR
Sbjct: 67  HIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQSLKSSEKEGLTPLKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA  T K Q   FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG K
Sbjct: 127 QKAHDFALQTQKEQCEGFKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTT
Sbjct: 187 PVHWSPSSQTALAEAELEYPEGHTSRSVYVAFPITSV---STPVLRPFLPNLSVAIWTTT 243

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVA+N +L Y+VVE                          +  ++IVA+DLV
Sbjct: 244 PWTLPGNLAVALNPELNYSVVET------------------------SESNYLIVATDLV 279

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L       L IK T+ G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGH
Sbjct: 280 EKLADTLNRTLTIKATVKGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGH 339

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDY+   +YGLPILSPVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE 
Sbjct: 340 GQEDYIVGQRYGLPILSPVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEA 399

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A+DAI  V+W+P
Sbjct: 400 YQHKYPYDWRTKKPTIFRATEQWFASVEGFRELALDAIDSVRWIP 444



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/218 (45%), Positives = 141/218 (64%), Gaps = 9/218 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  V +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPVKD 684

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNET 788
           ES W  +D  W    + +   W K  ++   V  + ET
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMET 834


>gi|440754805|ref|ZP_20934007.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa TAIHU98]
 gi|440175011|gb|ELP54380.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa TAIHU98]
          Length = 952

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 289/465 (62%), Positives = 349/465 (75%), Gaps = 27/465 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+T F MRANA  REPEI K W D Q++ ++A  N  E F+LHDGPPYANG+L
Sbjct: 7   YKDTVNLPQTDFDMRANASKREPEIQKFWQDEQIYEKLAQNNPKELFILHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+YKLLQ YKVRYVPGWDCHGLPIELKVLQSL    K+ LTP KLR
Sbjct: 67  HIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQSLKSSEKEGLTPLKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA  T K Q   FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG K
Sbjct: 127 QKAHDFALQTQKEQCEGFKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTT
Sbjct: 187 PVHWSPSSQTALAEAELEYPEGHTSRSVYVAFPITSV---STPVLTPFLPNLSVAIWTTT 243

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVA+N +L Y+VVE                          +  ++IVA+DLV
Sbjct: 244 PWTLPGNLAVALNPELNYSVVET------------------------SESNYLIVATDLV 279

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L   +   L IK T+ G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGH
Sbjct: 280 EKLADTFNRTLTIKATVKGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGH 339

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDY+   +YGLPILSPVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE 
Sbjct: 340 GQEDYIVGQRYGLPILSPVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEA 399

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 400 YQHKYPYDWRTKKPTIFRATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/218 (44%), Positives = 141/218 (64%), Gaps = 9/218 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  + +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPLKD 684

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNET 788
           ES W  +D  W    + +   W K  ++   V  + ET
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMET 834


>gi|428205874|ref|YP_007090227.1| isoleucyl-tRNA synthetase [Chroococcidiopsis thermalis PCC 7203]
 gi|428007795|gb|AFY86358.1| Isoleucyl-tRNA synthetase [Chroococcidiopsis thermalis PCC 7203]
          Length = 978

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 291/471 (61%), Positives = 348/471 (73%), Gaps = 5/471 (1%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LPKT F MRANA  REPEI K W ++Q++ R++ +N GE F LHDGPPYA
Sbjct: 3   ELGSYKDTVNLPKTKFDMRANATKREPEIQKFWAENQIYDRLSQQNSGEIFTLHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRY+L Q  KVR + GWDCHGLPIELKV+QS+    +  LTP
Sbjct: 63  NGSLHIGHALNKILKDIINRYQLQQGRKVRCIHGWDCHGLPIELKVIQSMKPQERASLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA  FA   ++ Q AS KR+GV  DW N YLTL P+YEAAQI VFGQM L+GY+Y
Sbjct: 123 LELRHKARDFALKAMQEQCASLKRWGVIGDWENSYLTLKPKYEAAQIGVFGQMVLKGYVY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPV+WSPSS+TALAEAELEYPEGH SRS+YA F M    PS    L  FLP L +A+
Sbjct: 183 RGFKPVYWSPSSKTALAEAELEYPEGHTSRSLYAAFPMTHIEPSVFPKLKSFLPHLWVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN AVAVN  L YAVVE+         A           L+DQ   ++IVA
Sbjct: 243 WTTTPWTIPANLAVAVNPDLTYAVVEMSR-----KDAETQSTLSAFASLRDQNPQYLIVA 297

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLV  L    G +L +K T  G +LE+C+Y HP+ +R+ P+VIGGDY+TTESGTGLVHT
Sbjct: 298 ADLVERLSVTLGAQLTVKATFKGYELEHCKYRHPLCDRESPIVIGGDYVTTESGTGLVHT 357

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY   ++Y LPILSPVD +G FT EAG+F+ L+VLG+GN AVV+ L++  SL+
Sbjct: 358 APGHGQEDYQVGMRYNLPILSPVDADGNFTAEAGQFAKLNVLGEGNAAVVQALEQAGSLL 417

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY HKYPYDWRTKKP I RATEQWFASVEGFR AA+  I  V+W+P Q
Sbjct: 418 KEEPYVHKYPYDWRTKKPVILRATEQWFASVEGFRDAALQEIAHVRWIPAQ 468



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 94/198 (47%), Positives = 134/198 (67%), Gaps = 7/198 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           +E P YGADVLRLWVSSVDY+ DV I   +L+Q++D   K+R T R+LLGNLHD+    +
Sbjct: 647 KEEPPYGADVLRLWVSSVDYSADVPISKNILKQLADARNKIRNTARFLLGNLHDFDPSKD 706

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++ Y+ LP +D+Y L ++  +   + ++++ YQFF+ FQ +Q F +VDLS+FY D+AKDR
Sbjct: 707 AVPYEQLPELDRYMLHRMTEVFNEVTQAFDKYQFFRFFQTVQNFCVVDLSSFYLDIAKDR 766

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTVL   L ++ + IAP+L H+AED+WQ LP+        + E VF
Sbjct: 767 LYISAANSFRRRSCQTVLQIALENLAKAIAPVLCHMAEDIWQYLPYP------KSHESVF 820

Query: 751 ESKWPVLDEKWRTFPVGE 768
           ES W  L++KW+   + E
Sbjct: 821 ESGWVKLEDKWQNSELAE 838


>gi|390440600|ref|ZP_10228826.1| Isoleucyl-tRNA synthetase [Microcystis sp. T1-4]
 gi|389836062|emb|CCI32952.1| Isoleucyl-tRNA synthetase [Microcystis sp. T1-4]
          Length = 952

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 289/465 (62%), Positives = 349/465 (75%), Gaps = 27/465 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+T F MRANA  REPEI K W D Q++ ++A  N  E F+LHDGPPYANG+L
Sbjct: 7   YKDTVNLPQTDFDMRANASKREPEIQKFWQDEQIYEKLAQNNPKELFILHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+YKLLQ YKVRYVPGWDCHGLPIELKVLQSL    K+ LTP KLR
Sbjct: 67  HIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQSLKSSEKEGLTPLKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA  T K Q   FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG K
Sbjct: 127 QKAHDFALQTQKEQCEGFKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTT
Sbjct: 187 PVHWSPSSQTALAEAELEYPEGHTSRSVYVAFPITSV---STPVLTPFLPNLSVAIWTTT 243

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVA+N +L Y+VVE                          +  ++IVA+DLV
Sbjct: 244 PWTLPGNLAVALNPELNYSVVET------------------------SESNYLIVATDLV 279

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L   +   L IK T+ G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGH
Sbjct: 280 EKLADTFNRTLTIKATVKGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGH 339

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDY+   +YGLPILSPVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE 
Sbjct: 340 GQEDYIVGQRYGLPILSPVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEA 399

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 400 YQHKYPYDWRTKKPTIFRATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 99/218 (45%), Positives = 141/218 (64%), Gaps = 9/218 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  V +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPVKD 684

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNET 788
           ES W  +D  W    + +   W K  ++   V  + ET
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMET 834


>gi|166363857|ref|YP_001656130.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189082327|sp|B0JSP4.1|SYI_MICAN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|166086230|dbj|BAG00938.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 952

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 289/465 (62%), Positives = 349/465 (75%), Gaps = 27/465 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+T F MRANA  REPEI K W D Q++ ++A  N  E F+LHDGPPYANG+L
Sbjct: 7   YKDTVNLPQTDFDMRANASKREPEIQKFWQDEQIYEKLAQNNPKELFILHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+YKLLQ YKVRYVPGWDCHGLPIELKVLQSL    K+ LTP KLR
Sbjct: 67  HIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQSLKSSEKEGLTPVKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA  T K Q   FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG K
Sbjct: 127 QKAHDFALQTQKEQCEGFKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTT
Sbjct: 187 PVHWSPSSQTALAEAELEYPEGHTSRSVYVAFPITSV---STPVLRPFLPNLSVAIWTTT 243

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVA+N +L Y+VVE                          +  ++IVA+DLV
Sbjct: 244 PWTLPGNLAVALNPELNYSVVET------------------------SESNYLIVATDLV 279

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L   +   L IK T+ G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGH
Sbjct: 280 EKLADTFNRTLTIKATVKGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGH 339

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDY+   +YGLPILSPVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE 
Sbjct: 340 GQEDYIVGQRYGLPILSPVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEA 399

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 400 YQHKYPYDWRTKKPTIFRATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/218 (45%), Positives = 141/218 (64%), Gaps = 9/218 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  V +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPVKD 684

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNET 788
           ES W  +D  W    + +   W K  ++   V  + ET
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMET 834


>gi|425441444|ref|ZP_18821718.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9717]
 gi|389717819|emb|CCH98134.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9717]
          Length = 952

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 289/465 (62%), Positives = 349/465 (75%), Gaps = 27/465 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+T F MRANA  REPEI K W D Q++ ++A  N  E F+LHDGPPYANG+L
Sbjct: 7   YKDTVNLPQTDFDMRANASKREPEIQKFWQDEQIYEKLAQNNPKELFILHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+YKLLQ YKVRYVPGWDCHGLPIELKVLQSL    K+ LTP KLR
Sbjct: 67  HIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQSLKSSEKEGLTPLKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA  T K Q   FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG K
Sbjct: 127 QKAHDFALQTQKEQCEGFKRYGVWGDWENPYLTLKPEYEAAQIAVFGKMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTT
Sbjct: 187 PVHWSPSSQTALAEAELEYPEGHTSRSVYVAFPITSV---STPVLRPFLPNLSVAIWTTT 243

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVA+N +L Y+VVE                          +  ++IVA+DLV
Sbjct: 244 PWTLPGNLAVALNPELNYSVVET------------------------SESNYLIVATDLV 279

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L   +   L IK T+ G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGH
Sbjct: 280 EKLADTFNRTLTIKATVKGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGH 339

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDY+   +YGLPILSPVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE 
Sbjct: 340 GQEDYIVGQRYGLPILSPVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEA 399

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 400 YQHKYPYDWRTKKPTIFRATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/218 (44%), Positives = 141/218 (64%), Gaps = 9/218 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  V +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPVKD 684

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y++LP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEELPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNET 788
           ES W  +D  W    + +   W K  ++   V  + ET
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMET 834


>gi|427724546|ref|YP_007071823.1| isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 7376]
 gi|427356266|gb|AFY38989.1| Isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 7376]
          Length = 963

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 287/471 (60%), Positives = 349/471 (74%), Gaps = 20/471 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK+TV+LPKT+F MRANA+ +EPE+ K W + Q++  +A  N G  F LHDGPPYA
Sbjct: 3   EAKSYKNTVNLPKTSFNMRANAVQKEPELQKFWQEQQIYETLAADNPGSTFTLHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LHMGHALNK+LKD+IN+YKLLQ +K RYVPGWDCHGLPIELKVLQS++++ +K+LTP
Sbjct: 63  NGDLHMGHALNKVLKDVINKYKLLQGHKTRYVPGWDCHGLPIELKVLQSMNDEVRKNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            KLR KA  FA  T K Q  SF+RYGVW DW NPYLTL P+YEAAQIEVFG+M+L+GYIY
Sbjct: 123 IKLRYKARDFAIKTQKKQAKSFQRYGVWGDWENPYLTLTPDYEAAQIEVFGEMALKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH S+SIY  F +     +   +L E+   LG+A+
Sbjct: 183 RGLKPVHWSPSSQTALAEAELEYPEGHTSQSIYVSFPITELSDTAKEILGEYADSLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVA+N  L+YAVVE       D    A K              ++IVA
Sbjct: 243 WTTTPWTLPGNLAVAINPDLEYAVVET------DGTLCAQK--------------YLIVA 282

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            DL  TL   + + L IK +  G+ +E C Y HP+ +R+ PVV GGDYITTESGTGLVHT
Sbjct: 283 KDLAETLTETFESALSIKGSFKGNVIEQCTYQHPLFDRKSPVVAGGDYITTESGTGLVHT 342

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+T  KYGLP+LSPVD EG  T EAG+F+GL+VL   N  +++ L  + +L+
Sbjct: 343 APGHGQEDYITGQKYGLPLLSPVDAEGTLTTEAGEFAGLNVLNGANDKIIEALKGKQALL 402

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V+W+P Q
Sbjct: 403 KEEAYQHKYPYDWRTKKPTIFRATEQWFASVEGFRDQALAAIKDVQWIPAQ 453



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 101/191 (52%), Positives = 138/191 (72%), Gaps = 7/191 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q++D+YRK+R T R+LLGN+HD+    N
Sbjct: 632 KKEPPYGADVLRLWVSSVDYSSDVPIGQTILKQLADVYRKIRNTARFLLGNIHDFDPAKN 691

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I+Y+DL  +D+Y L Q  N+  ++ E++ES+QFFK FQ +Q F +VDLSNFY D AKDR
Sbjct: 692 AIAYEDLAELDKYILHQASNVFSDVTEAFESFQFFKFFQKVQNFCVVDLSNFYLDAAKDR 751

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY   T S  RRSCQTV++  L  + + IAP+L H+AED+WQNLP+       ++ + VF
Sbjct: 752 LYISDTDSPRRRSCQTVIALILEMLTKAIAPVLCHMAEDIWQNLPYE------TSEKSVF 805

Query: 751 ESKWPVLDEKW 761
            S W  LDE+W
Sbjct: 806 ASGWYKLDEQW 816


>gi|425468553|ref|ZP_18847563.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9701]
 gi|389884790|emb|CCI34946.1| Isoleucyl-tRNA synthetase [Microcystis aeruginosa PCC 9701]
          Length = 952

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 289/465 (62%), Positives = 348/465 (74%), Gaps = 27/465 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+T F MRANA  REPEI K W D Q++ ++A  N  E F+LHDGPPYANG+L
Sbjct: 7   YKDTVNLPQTDFDMRANASKREPEIQKFWQDEQIYEKLAQNNPKELFILHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+YKLLQ YKVRYVPGWDCHGLPIELKVLQSL    K+ LTP KLR
Sbjct: 67  HIGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQSLKSSEKEGLTPLKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA  T K Q   FKRYGVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG K
Sbjct: 127 QKAHDFALQTQKEQCEGFKRYGVWGDWENPYLTLQPEYEAAQIAVFGKMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH SRS+Y  F + S    ++ +L  FLP+L +A+WTTT
Sbjct: 187 PVHWSPSSQTALAEAELEYPEGHTSRSVYVAFPITSV---STPVLTPFLPNLSVAIWTTT 243

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVA+N +L Y+VVE                          +  ++IVA+DLV
Sbjct: 244 PWTLPGNLAVALNPELNYSVVET------------------------SESNYLIVATDLV 279

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L       L IK T+ G +LE+ +Y HP+ +R+  ++IGGDY+TT+SGTGLVHTAPGH
Sbjct: 280 EKLADTLNRTLTIKATVKGLELEHTKYRHPLFDRESAILIGGDYVTTDSGTGLVHTAPGH 339

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDY+   +YGLPILSPVDD+G FT EAG+F+GL+VL D N A++  L E+ +L+ EE 
Sbjct: 340 GQEDYIVGQRYGLPILSPVDDKGNFTAEAGQFAGLNVLKDANEAIILALTEKGALLKEEA 399

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Y+HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A++AI  V+W+P
Sbjct: 400 YQHKYPYDWRTKKPTIFRATEQWFASVEGFRELALEAIDSVRWIP 444



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 99/218 (45%), Positives = 141/218 (64%), Gaps = 9/218 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YG DV+RLWVSSVDYT DV IG  +L+Q+ DI  K+R T R+LLG+L+D+  V +
Sbjct: 625 KKEPAYGVDVIRLWVSSVDYTNDVNIGQNILKQLVDIRNKIRNTARFLLGSLNDFDPVKD 684

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y+DLP ID+Y L ++  +   +  ++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 685 AVAYEDLPEIDRYMLHRISEVFTEVTAAFESFQFFRFFQTVQNFCVVDLSNFYIDIAKDR 744

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTV +  L ++ + IAP+L HLAED+WQ LP+       +    VF
Sbjct: 745 LYISDPNSFRRRSCQTVYAIALENLAKAIAPVLSHLAEDIWQFLPYK------TPYLSVF 798

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNET 788
           ES W  +D  W    + +   W K  ++   V  + ET
Sbjct: 799 ESGWLNIDPAWNNRELADK--WAKFRQLRTEVNKVMET 834


>gi|428771226|ref|YP_007163016.1| isoleucyl-tRNA synthetase [Cyanobacterium aponinum PCC 10605]
 gi|428685505|gb|AFZ54972.1| Isoleucyl-tRNA synthetase [Cyanobacterium aponinum PCC 10605]
          Length = 968

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 295/471 (62%), Positives = 345/471 (73%), Gaps = 17/471 (3%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E+  YK TV+LPKT F MRANA+ +EPE+ + W   QV+ ++A  N  + F+LHDGPPYA
Sbjct: 3   EQKSYKDTVNLPKTGFDMRANAVKKEPELQEFWAKEQVYEKLAQNNPKDLFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LHMGHALNK+LKDIIN+YKLLQ +KVRYVPGWDCHGLPIELKVLQSL +  ++ LTP
Sbjct: 63  NGSLHMGHALNKVLKDIINKYKLLQGHKVRYVPGWDCHGLPIELKVLQSLKQKEREALTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
             LR KA  FA    + Q   FKRYGVW DW NPYLTL PEYEAAQIEVFG+M+L GYIY
Sbjct: 123 ITLRHKARDFALKAQQEQAEGFKRYGVWGDWENPYLTLLPEYEAAQIEVFGKMALNGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSIYA F +         L  EF+P+L +A+
Sbjct: 183 RGLKPVHWSPSSQTALAEAELEYPEGHTSRSIYASFTLTKLGEKAQSLA-EFMPNLAVAI 241

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVAVN  L YAVVEI   L G+                     ++IVA
Sbjct: 242 WTTTPWTIPGNLAVAVNGHLDYAVVEISPRLVGEGLGVR----------------YLIVA 285

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            DLV +L      +L IK  + G +LE   Y HP+ +R+ PVVIGGDYITTESGTGLVHT
Sbjct: 286 KDLVESLSNTLDCELTIKTVIKGEELELSTYKHPLFDRESPVVIGGDYITTESGTGLVHT 345

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG EDY+T  KY LPILSPVDD+G FTEEAG+F GL+VL D N A++  L  + SL+
Sbjct: 346 APGHGLEDYMTGQKYHLPILSPVDDKGNFTEEAGEFQGLNVLKDANQAIIDALTAKGSLL 405

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y HKYPYDWRTKKPTIFRATEQWFASV+GFR  A+ AI +VKW+P Q
Sbjct: 406 KEEAYAHKYPYDWRTKKPTIFRATEQWFASVDGFRDLALKAIKEVKWIPSQ 456



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 100/195 (51%), Positives = 135/195 (69%), Gaps = 7/195 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSS DY+GDV IG  +++Q++D+YRK+R T R+L+GNLHD+    +
Sbjct: 635 KQQPPYGADVLRLWVSSTDYSGDVRIGDNIIKQLADVYRKIRNTARFLIGNLHDFDPQKD 694

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++SY+DLP +D+Y L +   +   I E++ESYQFFK FQ +Q F +VDLSNFY D+AKDR
Sbjct: 695 AVSYEDLPELDKYILHETYLVFSEITEAFESYQFFKFFQKVQNFCVVDLSNFYLDIAKDR 754

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RRSCQTV++  L ++ R IAP+L H+AED+WQNLP+            VF
Sbjct: 755 LYISDPNSPRRRSCQTVMAIILENLARAIAPVLCHMAEDIWQNLPYEKPFNS------VF 808

Query: 751 ESKWPVLDEKWRTFP 765
           E  W  L+ KW   P
Sbjct: 809 EGGWVKLESKWVQSP 823


>gi|113477079|ref|YP_723140.1| isoleucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110168127|gb|ABG52667.1| Isoleucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 1152

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 288/471 (61%), Positives = 343/471 (72%), Gaps = 18/471 (3%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LP+T F MRAN++ REPE+ K W   Q++ R++  N GE F LHDGPPYA
Sbjct: 3   EAKSYKETVNLPQTNFNMRANSVTREPELQKFWAQEQIYERLSQTNPGEIFTLHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGNLH+GHALNKILKDIINRY++LQ  KVRYVPGWDCHGLPIELKV+Q++    +  LTP
Sbjct: 63  NGNLHIGHALNKILKDIINRYQILQGRKVRYVPGWDCHGLPIELKVIQNIKSAERAKLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA  FA  T+  Q  SFKRYGVW DW +PY+TL PEYEAAQI VFG+M L+GYIY
Sbjct: 123 IELRRKARDFALETIDKQRESFKRYGVWGDWEHPYMTLSPEYEAAQIGVFGKMVLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSIYA F++ +   +    L  +L  L +A+
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHKSRSIYAAFKITNLAKAVEKSLESYLEKLWVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AV+VN  L YAVV+     + D A   +K                IVA
Sbjct: 243 WTTTPWTIPGNLAVSVNPDLNYAVVKP----DADYAMGKDK--------------LFIVA 284

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++ V  L A  GT L    T+ G DLENC Y HP+ +R+  +VIGGDY+TTESGTGLVHT
Sbjct: 285 AEAVERLSATLGTTLTPVATVKGEDLENCTYQHPLFDRESKIVIGGDYVTTESGTGLVHT 344

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +Y L ILSPVD  GKFT EAG+F+GL VL +GN+AV++ L    SL+
Sbjct: 345 APGHGQEDYIVGQRYSLSILSPVDGNGKFTAEAGEFTGLSVLAEGNIAVIEALQNVNSLL 404

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI +V W+P Q
Sbjct: 405 KEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRSEALKAIAEVNWIPAQ 455



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 93/191 (48%), Positives = 140/191 (73%), Gaps = 7/191 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGAD+LRLWVSSVDY+ DV +G  +L+Q++DIYRK+R T R+LLGN+HD+    +
Sbjct: 634 KQEPAYGADILRLWVSSVDYSSDVPLGKNILKQIADIYRKIRNTARFLLGNIHDFDPAKD 693

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y+++P +D+Y L ++  +   +++ ++ +Q+F+ FQ IQ F +VDLSNFY D+AKDR
Sbjct: 694 AVAYEEMPELDRYMLHRITEVFAEVKDGFDKFQYFRFFQTIQNFCVVDLSNFYLDIAKDR 753

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY   T +F RRSCQTVL   + ++ + IAP+LPH+AED+WQNLP+       +  + VF
Sbjct: 754 LYISATDAFRRRSCQTVLVVAVENLAKAIAPVLPHMAEDIWQNLPYP------TPCKSVF 807

Query: 751 ESKWPVLDEKW 761
           ES W  L+EKW
Sbjct: 808 ESGWVKLEEKW 818


>gi|172039458|ref|YP_001805959.1| isoleucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|254782384|sp|B1WVA3.1|SYI_CYAA5 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|171700912|gb|ACB53893.1| isoleucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 959

 Score =  603 bits (1556), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 291/467 (62%), Positives = 350/467 (74%), Gaps = 20/467 (4%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LPKT F MRANA+ REPE+ K W D+Q++ +++ +N  E FVLHDGPPYANG+L
Sbjct: 7   YKDTVNLPKTNFSMRANAVKREPELQKFWADNQIYEKLSQENPEEVFVLHDGPPYANGSL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNK LKDIIN+YKLL+ YKVRYVPGWDCHGLPIELKVLQS+    ++ LTP KLR
Sbjct: 67  HMGHALNKTLKDIINKYKLLRGYKVRYVPGWDCHGLPIELKVLQSMKSKEREGLTPLKLR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA  T + Q   FKR+GVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG K
Sbjct: 127 HKARDFALKTQEEQAKGFKRFGVWGDWENPYLTLTPEYEAAQIGVFGEMALKGYIYRGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH SRSI+A F ++ A   T  +L  FL  LG+A+WTTT
Sbjct: 187 PVHWSPSSQTALAEAELEYPEGHTSRSIFAAFPIIKASKDTEEILQPFLNKLGVAIWTTT 246

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P N AVA+N  L YAVVE  S                 +V   Q   ++IVA+DLV
Sbjct: 247 PWTLPGNLAVALNPDLNYAVVEQNS-----------------DVCNYQ---YLIVAADLV 286

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L   + T+L +K TL G  LE+  Y HP+ +R+  ++IGGDY+TTESGTGLVHTAPGH
Sbjct: 287 ERLSTTFETELTVKATLPGKALEHTIYRHPLYDRESEILIGGDYVTTESGTGLVHTAPGH 346

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQEDY+   +YGL ILSPVD +G FTEEA +F+GL+VL D N  ++  L E+ SL+ EE 
Sbjct: 347 GQEDYMVGQRYGLGILSPVDAKGNFTEEARQFAGLNVLKDANEVIINELKEKGSLLKEEA 406

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           Y+HKYPYDWRTKKPTIFRATEQWFASV+GFR AA+ AI  V+W+P Q
Sbjct: 407 YQHKYPYDWRTKKPTIFRATEQWFASVKGFRDAALTAIKTVQWIPAQ 453



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 96/205 (46%), Positives = 139/205 (67%), Gaps = 9/205 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+SDIYRK+R T R+LLGNLHD+    +
Sbjct: 632 KQEPPYGADVLRLWVSSVDYSSDVPIGKTILKQLSDIYRKIRNTARFLLGNLHDFDPKKD 691

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++SY++LP +D+Y L ++  +   + +++E+YQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 TVSYEELPELDRYMLHRITEVFTEVTDAFETYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RRSCQTVL+  + ++ + IAP+L H+AED+WQ LP+       +  + VF
Sbjct: 752 LYISHPESIRRRSCQTVLAIAIENLAKAIAPVLCHMAEDIWQFLPYE------TPYKSVF 805

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKI 775
            + W    ++W    +     W KI
Sbjct: 806 TAGWVKTSKQWENSELSAS--WAKI 828


>gi|126658904|ref|ZP_01730047.1| isoleucyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126619854|gb|EAZ90580.1| isoleucyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 959

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 286/471 (60%), Positives = 355/471 (75%), Gaps = 20/471 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LPKT F MRAN++ +EPE+ K W D+Q++ +++++N  + F+LHDGPPYA
Sbjct: 3   EPKSYKDTVNLPKTDFSMRANSVKKEPELQKFWADNQIYEKLSEENPEDVFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LHMGHALNK LKDIIN+YKLL+ YKVRYVPGWDCHGLPIELKVLQS+    ++ LTP
Sbjct: 63  NGSLHMGHALNKTLKDIINKYKLLRGYKVRYVPGWDCHGLPIELKVLQSMKSKEREGLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            KLR KA  FA  T + Q   FKR+GVW DW NPYLTL PEYEAAQI VFG+M L+GYIY
Sbjct: 123 LKLRHKARDFALKTQEEQAKGFKRFGVWGDWENPYLTLTPEYEAAQIGVFGEMVLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSI+A F +++A    + +L  FL +LG+A+
Sbjct: 183 RGLKPVHWSPSSQTALAEAELEYPEGHTSRSIFAAFPIINASKDAAEILEPFLNNLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVA+N  L YAVVE  S                 +V K Q   ++IVA
Sbjct: 243 WTTTPWTLPGNLAVALNPDLNYAVVEQTS-----------------DVCKYQ---YLIVA 282

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            DLV  L   + T+L +K T+ G  LE+  Y HP+ +R+  ++IGGDY+TTESGTGLVHT
Sbjct: 283 VDLVEKLSTTFETELTVKATIPGKALEHTIYRHPLYDRESEILIGGDYVTTESGTGLVHT 342

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGL +LSPVD +G FTEEAG+F+GL+VL + N  ++  L E+ SL+
Sbjct: 343 APGHGQEDYMVGQRYGLGVLSPVDAKGNFTEEAGQFAGLNVLKNANEVIINELKEKGSLL 402

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y+HKYPYDWRTKKPTIFRATEQWFASV+GFR+AA+ AI  V+W+P Q
Sbjct: 403 KEEAYQHKYPYDWRTKKPTIFRATEQWFASVKGFREAALTAIKTVQWIPAQ 453



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 92/191 (48%), Positives = 137/191 (71%), Gaps = 7/191 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           ++ P YGADVLRLWVSSVDY+ DV +G  +L+Q+SDIYRK+R T R+LLGNLHD+    +
Sbjct: 632 KQEPPYGADVLRLWVSSVDYSSDVPLGKTILKQLSDIYRKIRNTARFLLGNLHDFDPKRD 691

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++SY++LP +D+Y L ++  +   + +++E+YQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 AVSYEELPELDRYMLHRITEVFTEVTDAFETYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RRSCQTVL+  + ++ + IAP+L H+AED+WQ LP+       ++ + VF
Sbjct: 752 LYISHPDSMRRRSCQTVLAVAIENLAKAIAPVLCHMAEDIWQFLPYE------TSEKSVF 805

Query: 751 ESKWPVLDEKW 761
           ++ W    ++W
Sbjct: 806 QAGWVKTSKQW 816


>gi|334118453|ref|ZP_08492542.1| Isoleucyl-tRNA synthetase [Microcoleus vaginatus FGP-2]
 gi|333459460|gb|EGK88073.1| Isoleucyl-tRNA synthetase [Microcoleus vaginatus FGP-2]
          Length = 1197

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 285/471 (60%), Positives = 341/471 (72%), Gaps = 19/471 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LPKT F MRANA  REPE+ + W D +++ R++  N G+ F+LHDGPPYA
Sbjct: 2   EAKSYKDTVNLPKTKFDMRANATKREPELQQFWADQEIYDRLSHNNPGDLFILHDGPPYA 61

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LH+GHALNKILKD INRY++L+  KVRYVPGWDCHGLPIELKVLQ++  + + +LTP
Sbjct: 62  NGQLHIGHALNKILKDFINRYQMLRGKKVRYVPGWDCHGLPIELKVLQNMKSEERLNLTP 121

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KAA FA+ T++ Q  SF+RYGVW DW +PYLT+ PEYEAAQI VFGQM L+GYIY
Sbjct: 122 IELRHKAATFAQQTMEQQRESFQRYGVWGDWEHPYLTMKPEYEAAQIGVFGQMVLKGYIY 181

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSIY  F +     S    L  ++P L  A+
Sbjct: 182 RGFKPVHWSPSSKTALAEAELEYPEGHTSRSIYVGFHVKKLSKSLQTKLKRYMPSLWAAI 241

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN A+AVN +L YAVVE                  PGN    Q+  FI+VA
Sbjct: 242 WTTTPWTIPANLAIAVNPELTYAVVE-----------------PPGNAHIAQQ--FILVA 282

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            D V  L A + T L I  T  G +LE C Y HP+ +R+ P+V GGDYIT +SGTGLVHT
Sbjct: 283 VDAVDRLSATFNTNLKILATFKGKELEGCSYKHPLFDRESPIVAGGDYITADSGTGLVHT 342

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQED++   + GLP+L+PVD+ G FT EAG+F GL+VLG+GN AV+  L E   LI
Sbjct: 343 APGHGQEDFIVGKRCGLPVLTPVDENGNFTAEAGQFVGLNVLGNGNAAVIDALGEANCLI 402

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y H YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V W+P Q
Sbjct: 403 KEESYAHSYPYDWRTKKPTIFRATEQWFASVEGFRDEALKAIADVNWIPAQ 453



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 89/188 (47%), Positives = 132/188 (70%), Gaps = 7/188 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGADVLRLWVSSVDY+ DV +G  +L+Q SD+YRK+R T ++LLGNLHD+    ++++Y+
Sbjct: 628 YGADVLRLWVSSVDYSADVPLGKNILKQQSDVYRKIRNTAKFLLGNLHDFDPAKDAVAYE 687

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +LP +D+Y L ++  +   +++++ES+QF + FQ +Q F  VDLSNFY D+AKDRLY   
Sbjct: 688 ELPELDRYMLHRMCEVFAEVQDAFESFQFSRFFQTVQNFCTVDLSNFYLDIAKDRLYISA 747

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
           T +  RRSCQTV++  + ++ R IAP+L H+AED+WQ LP+       +  + VFE+ W 
Sbjct: 748 TDTRRRRSCQTVIAIAVENLARAIAPVLCHMAEDIWQYLPYP------TPYKSVFEAGWV 801

Query: 756 VLDEKWRT 763
            +D  W  
Sbjct: 802 QIDASWHN 809


>gi|16330137|ref|NP_440865.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|383321880|ref|YP_005382733.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. GT-I]
 gi|383325049|ref|YP_005385902.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr.
           PCC-P]
 gi|383490933|ref|YP_005408609.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr.
           PCC-N]
 gi|384436200|ref|YP_005650924.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|451814296|ref|YP_007450748.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501011|sp|P73505.1|SYI_SYNY3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|1652625|dbj|BAA17545.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|339273232|dbj|BAK49719.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|359271199|dbj|BAL28718.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr. GT-I]
 gi|359274369|dbj|BAL31887.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr.
           PCC-N]
 gi|359277539|dbj|BAL35056.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803 substr.
           PCC-P]
 gi|407958042|dbj|BAM51282.1| isoleucyl-tRNA synthetase [Bacillus subtilis BEST7613]
 gi|451780265|gb|AGF51234.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 988

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 291/471 (61%), Positives = 339/471 (71%), Gaps = 20/471 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LP+T F MRANA  REPEI + W +  ++  +AD N  + FVLHDGPPYA
Sbjct: 3   EAKSYKDTVNLPQTRFDMRANANKREPEIQQYWQEKGIYADLADNNPKDLFVLHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LHMGHALNK+LKDIIN+YKLLQ +KV YVPGWDCHGLPIELKVLQSL    + +LTP
Sbjct: 63  NGALHMGHALNKVLKDIINKYKLLQGHKVHYVPGWDCHGLPIELKVLQSLKSSERAELTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
             LR KA  FA    + Q   F+RYG+W DW  PYLTL PEYEAAQI VFG M+L+GYIY
Sbjct: 123 LTLRHKARDFALKAQQEQAVGFQRYGIWGDWKKPYLTLTPEYEAAQIGVFGAMALKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSSRTALAEAELEYPEGH SRSIY  F +  A    + +L  ++ DL +A+
Sbjct: 183 RGLKPVHWSPSSRTALAEAELEYPEGHTSRSIYVSFPITQAGEKAAEILAPYIDDLAVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVA+N +L YAVVE +S +   S                    ++IVA
Sbjct: 243 WTTTPWTLPGNLAVALNPELTYAVVETESHIFHRS--------------------YLIVA 282

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            DLV  L   +G KL +K TL G  LEN  Y HP+ +R  P+VIGGDY+TTESGTGLVHT
Sbjct: 283 LDLVEKLSETFGVKLTVKVTLQGESLENTCYQHPLFDRVSPIVIGGDYVTTESGTGLVHT 342

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDYV   +YGLPILSPVD  G  TEEAGKF+GL+VL D N A++  L +Q  L+
Sbjct: 343 APGHGQEDYVVGQRYGLPILSPVDAAGNLTEEAGKFAGLNVLNDANEAIINALQDQKVLL 402

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE YEHKYPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI +V W+P Q
Sbjct: 403 KEEAYEHKYPYDWRTKKPTIFRATEQWFASVEGFRDQALKAIKEVTWIPTQ 453



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 96/192 (50%), Positives = 132/192 (68%), Gaps = 7/192 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWV+SVDY  DV IG  +L+Q+ DI  K+R T R+LLGNLHD+    +
Sbjct: 633 KQEPAYGADVLRLWVASVDYANDVPIGQGILKQLVDIRNKIRNTARFLLGNLHDFNPETD 692

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y+DLP +D+Y L ++  +   + E+YES+QFFK FQ +Q F +VDLSNFY D+AKDR
Sbjct: 693 AVAYEDLPELDRYMLHRMTEVFTEVTEAYESFQFFKFFQTVQNFCVVDLSNFYLDIAKDR 752

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +  RRSCQT+L   L ++ + IAP+L HLAED+WQ LP+          E VF
Sbjct: 753 LYISAPNAPRRRSCQTILQLALENLTKAIAPVLCHLAEDIWQFLPYE------KPTESVF 806

Query: 751 ESKWPVLDEKWR 762
           +S W  LD +W+
Sbjct: 807 QSGWVNLDAQWQ 818


>gi|300868292|ref|ZP_07112921.1| Isoleucyl-tRNA synthetase (modular protein) [Oscillatoria sp. PCC
           6506]
 gi|300333727|emb|CBN58105.1| Isoleucyl-tRNA synthetase (modular protein) [Oscillatoria sp. PCC
           6506]
          Length = 1183

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 294/478 (61%), Positives = 344/478 (71%), Gaps = 12/478 (2%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LPKT F MRANA+ REPE+ + W D  ++ R++  N GE F+LHDGPPYANG L
Sbjct: 7   YKDTVNLPKTKFDMRANAVKREPELQQFWADQHIYDRLSQNNPGELFILHDGPPYANGQL 66

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKD INRY++LQ  KVRYVPGWDCHGLPIELKVLQ +    ++ LT  +LR
Sbjct: 67  HIGHALNKILKDTINRYQMLQGRKVRYVPGWDCHGLPIELKVLQDMKPALRQKLTTIELR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            +A  FA AT++ Q   FKRYG+W +W +PYLTL PEYEAAQI VF QM L+GYIYRG K
Sbjct: 127 RQARDFAIATMEQQREGFKRYGIWGNWEHPYLTLKPEYEAAQIGVFAQMVLKGYIYRGMK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH SRSIY    +     S    L  +LP+L LAVWTTT
Sbjct: 187 PVHWSPSSKTALAEAELEYPEGHTSRSIYVALAIAKLAKSAKA-LTPYLPNLHLAVWTTT 245

Query: 346 PWTVPANAAVAVNAKLQYAVVEI----------QSLLEGDSAAPANKKSRPGNV-LKDQK 394
           PWT+PAN AVAVN  L YAVV+           Q+  E +  +    K  P N  L  + 
Sbjct: 246 PWTIPANLAVAVNPDLTYAVVKFSGEGLSTNGAQNSPESEELSAIELKKTPENKELSTKV 305

Query: 395 KVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
           +  +IVA+DLV  L A   TKL +  T+ G DLE   Y HP+ +R  PVVIGGDYIT +S
Sbjct: 306 EKTLIVAADLVEKLSATLNTKLEVLATIQGKDLEKSTYKHPLFDRISPVVIGGDYITADS 365

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           GTGLVHTAPGHGQEDY    +YGLP+LSPVDD G FT EAG+F GL+VLGDGN AV+  L
Sbjct: 366 GTGLVHTAPGHGQEDYQVGQRYGLPLLSPVDDNGNFTAEAGQFEGLNVLGDGNGAVIDAL 425

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
               +LI EE Y H YPYDWRTKKPTIFRATEQWFASVEGFR+AA+ AI  VKW+P Q
Sbjct: 426 AGAGALIKEEVYAHSYPYDWRTKKPTIFRATEQWFASVEGFREAALKAIADVKWIPAQ 483



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 95/193 (49%), Positives = 138/193 (71%), Gaps = 7/193 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGADVLRLWVSSVDY+ DV +G  +L+Q +D+YRK+R T R+LLGNLHD+    N++SY+
Sbjct: 658 YGADVLRLWVSSVDYSADVPLGKNILKQQADVYRKIRNTARFLLGNLHDFDPAKNAVSYE 717

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +LP +D+Y L ++  +   ++++++S+QFF+ FQ +Q F +VDLSNFY D+AKDRLY   
Sbjct: 718 ELPELDRYMLHRMTEVFTEVKDAFDSFQFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISA 777

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             S  RRSCQTVL+  + S+ R IAP+L HLAED+WQ +P+       +A + VFE+ W 
Sbjct: 778 EDSLRRRSCQTVLAIAVESLARAIAPVLCHLAEDIWQYIPYP------TAYKSVFEAGWV 831

Query: 756 VLDEKWRTFPVGE 768
            +D +W    +G+
Sbjct: 832 QIDHRWHNPELGK 844


>gi|428320457|ref|YP_007118339.1| Isoleucyl-tRNA synthetase [Oscillatoria nigro-viridis PCC 7112]
 gi|428244137|gb|AFZ09923.1| Isoleucyl-tRNA synthetase [Oscillatoria nigro-viridis PCC 7112]
          Length = 1196

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 285/471 (60%), Positives = 344/471 (73%), Gaps = 19/471 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LPKT F MRANA+ REPE+ + W D +++ R+++ N G+ FVLHDGPPYA
Sbjct: 2   EAKSYKDTVNLPKTKFDMRANAVKREPELQQFWADREIYDRLSENNPGDLFVLHDGPPYA 61

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LH+GHALNKILKD INRY++L+  KVRYVPGWDCHGLPIELKVLQ++  D + +LTP
Sbjct: 62  NGQLHIGHALNKILKDFINRYQILRGKKVRYVPGWDCHGLPIELKVLQNMKSDDRLNLTP 121

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA+ FA+ T++ Q  SF+RYGVW DW +PYLTL PEYEAAQI VFGQM L+GYIY
Sbjct: 122 IELRRKASAFAQQTMEQQRESFQRYGVWGDWKHPYLTLKPEYEAAQIGVFGQMVLKGYIY 181

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGH SRSIY  F +     S    L  ++P L  A+
Sbjct: 182 RGFKPVHWSPSSKTALAEAELEYPEGHTSRSIYVGFHVKKLSKSLQTKLKRYMPSLWAAI 241

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN A+AVN +L YAVVE           PAN             + F++VA
Sbjct: 242 WTTTPWTIPANLAIAVNPELTYAVVE----------PPANSHI---------AQQFMLVA 282

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            D V  L A + T+L I  T  G +LE C Y HP+ +R+ P+V GGDYIT +SGTGLVHT
Sbjct: 283 VDAVDRLSATFNTELKILATFKGKELEGCIYKHPLFDRESPIVAGGDYITADSGTGLVHT 342

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQED++   + GLP+L+PVD+ G FT EAG+F+GL+VLG+GN AV+  L E   LI
Sbjct: 343 APGHGQEDFIVGKRCGLPVLTPVDENGNFTAEAGQFAGLNVLGNGNAAVIDALAEANCLI 402

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y H YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V W+P Q
Sbjct: 403 KEESYAHSYPYDWRTKKPTIFRATEQWFASVEGFRDEALKAIADVNWIPAQ 453



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 88/188 (46%), Positives = 131/188 (69%), Gaps = 7/188 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGADVLRLWVSSVDY+ DV +G  +L+Q SD+YRK+R T ++LLGNLHD+    ++++ +
Sbjct: 628 YGADVLRLWVSSVDYSADVPLGKNILKQQSDVYRKIRNTAKFLLGNLHDFDPAKDAVACE 687

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +LP +D+Y L ++  +   +++++ES+QF + FQ +Q F  VDLSNFY D+AKDRLY   
Sbjct: 688 ELPELDRYMLHRMGEVFAEVQDAFESFQFSRFFQTVQNFCTVDLSNFYLDIAKDRLYISA 747

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
           T +  RRSCQTV++  + ++ R IAP+L H+AED+WQ LP+       +  + VFE+ W 
Sbjct: 748 TDTRRRRSCQTVIAIAVENLARAIAPVLCHMAEDIWQYLPYP------TPYKSVFEAGWV 801

Query: 756 VLDEKWRT 763
            +D  W  
Sbjct: 802 QIDASWHN 809


>gi|220908492|ref|YP_002483803.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254782385|sp|B8HMX3.1|SYI_CYAP4 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|219865103|gb|ACL45442.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 955

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 287/471 (60%), Positives = 350/471 (74%), Gaps = 26/471 (5%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LP+T F MRANA+ REPE+ K W ++Q++  ++ +N G+ F+LHDGPPYA
Sbjct: 3   EPGSYKETVNLPQTAFDMRANAVKREPELQKFWAENQIYENLSQENPGDPFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIIN+Y +LQ  KVRYVPGWDCHGLPIELKVLQ +  + +  LTP
Sbjct: 63  NGDLHIGHALNKILKDIINKYWMLQGRKVRYVPGWDCHGLPIELKVLQGMKSEQRAALTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
             LR  A +FA  TV+ Q  SFKRYGVW +W+NPYLTL PEYEAAQI VFGQM L+GYIY
Sbjct: 123 LSLRQAAKEFALQTVERQKQSFKRYGVWGEWDNPYLTLKPEYEAAQIGVFGQMVLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPV+WSPSS+TALAEAELEYPEGH SRSIY  F + S   +   +L ++LP+L +A+
Sbjct: 183 RGLKPVYWSPSSQTALAEAELEYPEGHTSRSIYVSFALTSLSATAEAVLKDYLPNLKVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVA+N  L YAVVE                       KD    +++VA
Sbjct: 243 WTTTPWTIPGNLAVALNPDLTYAVVE-----------------------KDGS--YLLVA 277

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++LV  LE   G  L IK T+AG  LE+  Y HP+ +RQ P+V+ GDY+TT+SGTGLVHT
Sbjct: 278 NELVERLETTLGVSLPIKTTIAGQALEHSTYQHPLFDRQGPLVM-GDYVTTDSGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDYV    YGLPILSPVD  G+FTEEAG+F+GL VL +GN AV++ L +  +L+
Sbjct: 337 APGHGQEDYVVGQHYGLPILSPVDGNGRFTEEAGQFAGLKVLDEGNEAVIQALQQVGALL 396

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y HKYPYDWRTKKP I RATEQWFASVEGFR+AA+ AI QV+W+P Q
Sbjct: 397 KEEAYSHKYPYDWRTKKPVILRATEQWFASVEGFREAALQAIAQVQWIPAQ 447



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 99/191 (51%), Positives = 132/191 (69%), Gaps = 7/191 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           +E P YGAD+LRLWVSSVDY+ DV +G  +L+QM+DIYRK+R T R+LLGNLHD+    N
Sbjct: 626 KEDPPYGADILRLWVSSVDYSSDVPLGKNILKQMADIYRKIRNTARFLLGNLHDFDPANN 685

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            + YD LP +D+Y L ++  +   + E++ SYQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 686 KVEYDRLPQLDRYMLHRIVEVFTEVNEAFTSYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 745

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY      F RRSCQTVL   L ++ + IAP++PHLAED+WQ LP+       +  + VF
Sbjct: 746 LYISAPDDFRRRSCQTVLWIALENLAKAIAPVVPHLAEDIWQFLPYP------TPYKSVF 799

Query: 751 ESKWPVLDEKW 761
           E+ W  LD  W
Sbjct: 800 EAGWVSLDATW 810


>gi|427713712|ref|YP_007062336.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 6312]
 gi|427377841|gb|AFY61793.1| Isoleucyl-tRNA synthetase [Synechococcus sp. PCC 6312]
          Length = 955

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 287/470 (61%), Positives = 345/470 (73%), Gaps = 19/470 (4%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYAN 162
           E  YK TV+LPKT F MRANA  REPEI   W + Q++  ++  N G  F LHDGPPYAN
Sbjct: 3   ESLYKDTVNLPKTAFDMRANAAKREPEIQAWWQEQQIYETLSQTNPGPRFTLHDGPPYAN 62

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G LH+GHA+NK LKDIIN+Y+LLQ  KV Y+PGWDCHGLPIELKVLQ+L  + ++ L   
Sbjct: 63  GALHIGHAMNKTLKDIINKYQLLQGQKVTYIPGWDCHGLPIELKVLQNLKPEERRGLDAL 122

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
            LR KA +FA  TV  Q  SF+RYGVW +W++PYLTL+P YEAAQI VFG+M L+GYIYR
Sbjct: 123 GLRQKAKEFALKTVDEQRQSFQRYGVWGNWDHPYLTLNPAYEAAQIGVFGEMVLKGYIYR 182

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPVHWSPSS+TALAEAELEYPEGHVS+S+YA F +          L+ FL +LG+A+W
Sbjct: 183 GLKPVHWSPSSQTALAEAELEYPEGHVSQSLYAAFEVTFLSQPLQLPLDSFLGELGVAIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P N  V+VN +L YAVVE+         AP   K             ++IVA 
Sbjct: 243 TTTPWTIPGNLGVSVNPELVYAVVEV------GQDAPGRFK-------------YLIVAK 283

Query: 403 DLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           DLV  LE   GT L I+ T+ G  LE+ RY HP+  R+  V+IGGDY+TTESGTGLVHTA
Sbjct: 284 DLVEQLETVLGTTLTIQATVMGKTLEHTRYRHPLFERESEVLIGGDYVTTESGTGLVHTA 343

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG EDY    +YGLPILSPVDD G FTEEAG+F+GL+VLG+GN A++K L+E  +L+ 
Sbjct: 344 PGHGLEDYGVGQRYGLPILSPVDDRGSFTEEAGEFAGLNVLGEGNTAIIKALEEVGALLK 403

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           +EPY HKYPYDWRTKKPTIFRATEQWFASV GFR AA++AI QVKW+P Q
Sbjct: 404 QEPYNHKYPYDWRTKKPTIFRATEQWFASVAGFRDAALEAIAQVKWIPAQ 453



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 97/192 (50%), Positives = 134/192 (69%), Gaps = 7/192 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           +E P YGADVLRLWVSSVDY+ DV +G  +L+Q+SD+YRK+R T R+LLGNLHD+    +
Sbjct: 629 KEDPAYGADVLRLWVSSVDYSTDVPVGKNILKQLSDVYRKIRNTARFLLGNLHDFDPSQD 688

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I Y  LP +D+Y L ++  +  ++  ++ESYQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 689 AIPYAQLPELDRYMLHRISEVFTDVTNAFESYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 748

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +  RRSCQTVL+  L ++ + IAP+L HLAED+WQ LP++      +  + VF
Sbjct: 749 LYISAVDAPRRRSCQTVLAIALENLAKAIAPVLCHLAEDIWQFLPYS------TPHKSVF 802

Query: 751 ESKWPVLDEKWR 762
           +S W  L E W 
Sbjct: 803 QSGWVNLSENWH 814


>gi|443326538|ref|ZP_21055189.1| Isoleucyl-tRNA synthetase [Xenococcus sp. PCC 7305]
 gi|442793860|gb|ELS03296.1| Isoleucyl-tRNA synthetase [Xenococcus sp. PCC 7305]
          Length = 959

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 289/476 (60%), Positives = 336/476 (70%), Gaps = 33/476 (6%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LP+T F MRANA+ REPE+   W ++Q++ +++  N  E F+LHDGPPYA
Sbjct: 3   EAKSYKETVNLPQTDFNMRANAVKREPELQNYWAENQIYEQLSQNNPKEPFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LHMGHALNKILKDIIN+YKLLQ +K  Y+PGWDCHGLPIELKVLQ +    ++ LTP
Sbjct: 63  NGTLHMGHALNKILKDIINKYKLLQGHKTDYIPGWDCHGLPIELKVLQKMKSKERQGLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            KLR KA +FA    + Q+  FKRYG+W DW NPYLTL PEYEAAQI VFG+M+L+GYIY
Sbjct: 123 LKLRQKAKQFALEAKQEQLEGFKRYGIWGDWENPYLTLTPEYEAAQIAVFGEMALKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSSRTALAEAELEYPEGH S SIYA F ++S        L ++LP+L +A+
Sbjct: 183 RGLKPVHWSPSSRTALAEAELEYPEGHTSPSIYAAFPVISLGDKAQE-LEQYLPNLAVAI 241

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVAVN  L+YAV E                              IIVA
Sbjct: 242 WTTTPWTIPGNLAVAVNGDLEYAVAETSG-------------------------KHIIVA 276

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            DLV  L   + T L IK T+ G  LE   Y HP+ +R   VVIGGDYITTESGTGLVHT
Sbjct: 277 KDLVEQLATTFETDLTIKTTVLGKVLEGITYHHPLFDRDSKVVIGGDYITTESGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGD-------GNVAVVKYL 514
           APGHGQEDY+T  KYGLPILSPVDD GKFTEEAG F+GL V+         GN A++  L
Sbjct: 337 APGHGQEDYITGQKYGLPILSPVDDSGKFTEEAGNFAGLQVVAKGNEKVSAGNQAIIDAL 396

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E  +L+  E Y HKYPYDWRTKKPTIFRATEQWFASVEGFR AA+DAI  V W+P
Sbjct: 397 QEAGTLLKHEEYAHKYPYDWRTKKPTIFRATEQWFASVEGFRDAALDAIKSVTWIP 452



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 103/205 (50%), Positives = 145/205 (70%), Gaps = 9/205 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +++Q+ DIYRK+R T R+LLGNLHD+    +
Sbjct: 632 KQEPPYGADVLRLWVSSVDYSSDVRIGAGIVKQLGDIYRKIRNTSRFLLGNLHDFDPKKD 691

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y+DLP +D+Y L ++  +   I ++YESYQF++ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 692 AVAYEDLPELDKYMLHRITEVFAEITDAYESYQFYRFFQTVQNFCVVDLSNFYLDIAKDR 751

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY  G  SF RRSCQTVL+  + ++ + IAP+L H+AED+WQ+LP+    E G  +  VF
Sbjct: 752 LYISGLGSFRRRSCQTVLAIAVENLAKAIAPVLCHMAEDIWQSLPY----ETGYNS--VF 805

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKI 775
           +S W   D  W+   + E  FW +I
Sbjct: 806 QSGWLETDASWQNPELVE--FWQEI 828


>gi|284928634|ref|YP_003421156.1| Isoleucyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809093|gb|ADB94798.1| Isoleucyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 960

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 280/471 (59%), Positives = 347/471 (73%), Gaps = 20/471 (4%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E+  YK+TV+LP+T F MRAN++ +EPE+ + W  ++V+ +++++N  E F+LHDGPPYA
Sbjct: 3   EQKNYKNTVNLPQTDFNMRANSVSKEPELQEFWIKNKVYKKLSEENPEELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LHMGHALNKILKD IN+YKLLQ +K+ Y+PGWDCHGLPIELKVLQS+    +++L P
Sbjct: 63  NGSLHMGHALNKILKDFINKYKLLQGHKISYIPGWDCHGLPIELKVLQSISSKERQNLNP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA  FA  T + Q  SF+R GVW DW+NPYLT+ PEYEAAQI VF  M  +GYIY
Sbjct: 123 LQLRYKARDFALKTQQEQAKSFQRLGVWGDWHNPYLTMLPEYEAAQIGVFWNMFNKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGHVSRSIY  F + +A    +G+L +FL DLG+ +
Sbjct: 183 RGLKPVHWSPSSQTALAEAELEYPEGHVSRSIYTAFSVTNASQEITGILKDFLSDLGVVI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN AVAVN  ++Y+VVE                 +   V K +   ++IVA
Sbjct: 243 WTTTPWTIPANLAVAVNPVIKYSVVE-----------------QTTGVCKHK---YLIVA 282

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            DLV  L   + T L I+ T +G+ LEN  Y H + +R+C +VIGGDYI T SGTGLVHT
Sbjct: 283 EDLVDKLSQVFETSLKIRATFSGNLLENTIYRHSLFDRECKIVIGGDYINTSSGTGLVHT 342

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   KYGL ILSPVD++G  TEEAG F+GL+VL D N  ++  L E+  LI
Sbjct: 343 APGHGQEDYLVGQKYGLEILSPVDNKGILTEEAGPFAGLNVLKDANEVIINRLKEEKVLI 402

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE YEHKYPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V W+P Q
Sbjct: 403 KEELYEHKYPYDWRTKKPTIFRATEQWFASVEGFRAHAISAIKNVNWIPSQ 453



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 85/163 (52%), Positives = 122/163 (74%), Gaps = 1/163 (0%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV++G  +L+Q+SD+YRK+R T R+LLGNLHD+    +
Sbjct: 632 KKEPAYGADVLRLWVSSVDYSSDVLVGETILKQISDVYRKIRNTARFLLGNLHDFDPQKD 691

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++SY+ LP +D+Y L ++  + K + +++E++ F   +Q IQ F IVDLSNFY D+AKDR
Sbjct: 692 TVSYEKLPELDRYMLNRIAEVSKEVTKAFETFHFSNFYQAIQNFCIVDLSNFYLDIAKDR 751

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQN 733
           LY     SF RRSCQTVL   + ++  +IAP+L H+AED+WQ+
Sbjct: 752 LYISSPNSFRRRSCQTVLFLAIKNLSTMIAPVLSHMAEDIWQH 794


>gi|359459207|ref|ZP_09247770.1| isoleucyl-tRNA synthetase [Acaryochloris sp. CCMEE 5410]
          Length = 970

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 284/471 (60%), Positives = 343/471 (72%), Gaps = 26/471 (5%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E GRYK TV+LPKT F MRANA+ REPE+ K W DHQ++  ++  N G+ FVLHDGPPYA
Sbjct: 3   ESGRYKKTVNLPKTKFDMRANAVKREPELQKFWADHQIYENLSQNNPGDVFVLHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIIN+++LLQ  KVRYVPGWDCHGLPIELKVLQ++  + +  LTP
Sbjct: 63  NGDLHIGHALNKILKDIINKFQLLQGRKVRYVPGWDCHGLPIELKVLQNIQPENRAKLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            KLR KA  FA  TV+ Q  SF+RYGVW +W NPYLTL PEYEAAQI VFG+M+L+GYIY
Sbjct: 123 LKLRWKARDFALKTVEKQSKSFQRYGVWGNWENPYLTLKPEYEAAQIGVFGKMALKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPV+WSPSS+TALAEAELEYPEGH SRSIY  F++     +   LL+E+LP L +A+
Sbjct: 183 RGFKPVYWSPSSQTALAEAELEYPEGHTSRSIYVTFKVTGLSEAAQPLLDEYLPTLKVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AV++N  L YAVV+                           + ++IVA
Sbjct: 243 WTTTPWTIPGNLAVSLNPDLTYAVVKA-------------------------GEDYLIVA 277

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            DLV TL     +   I KTL G  LEN  Y HP+  R+ P+V+ GDY+TTESGTGLVHT
Sbjct: 278 EDLVETLTETLESSFKIIKTLPGKALENSTYQHPLFEREGPLVL-GDYVTTESGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY    +YGL +LSPVD +G FT+EAG F+GL+VL  GN AV++ L    +L+
Sbjct: 337 APGHGQEDYQVGQQYGLAMLSPVDGDGTFTDEAGPFAGLNVLNGGNEAVIEALQSAGALL 396

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y HKYPYDWRTKKP I RATEQWFASV+GFR+A +DAI  V W+P Q
Sbjct: 397 KEESYAHKYPYDWRTKKPVILRATEQWFASVDGFREAVLDAIATVNWIPAQ 447



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 95/193 (49%), Positives = 138/193 (71%), Gaps = 7/193 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY  DV +G  +L+QM+D+YRK+R T R+LLGNLHD+    +
Sbjct: 626 KQDPPYGADVLRLWVSSVDYASDVPLGKNILKQMADVYRKIRNTSRFLLGNLHDFDPAQD 685

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y+DLP +D+Y L ++  +  ++ E++ES+QFF+ FQ +Q F +VDLSNFY D AKDR
Sbjct: 686 AVNYEDLPQLDRYMLHRITEVFTDVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDTAKDR 745

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +  RRSCQTVL+  L ++ R IAP+L H+AED+WQ+LP+       +  + VF
Sbjct: 746 LYISEPNNPRRRSCQTVLAIALENLARAIAPVLSHMAEDIWQSLPYQ------TEHQSVF 799

Query: 751 ESKWPVLDEKWRT 763
            S W  L+++W+ 
Sbjct: 800 ASGWMHLEDQWQN 812


>gi|427420559|ref|ZP_18910742.1| Isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 7375]
 gi|425756436|gb|EKU97290.1| Isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 7375]
          Length = 971

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 285/473 (60%), Positives = 342/473 (72%), Gaps = 27/473 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV LPKT F MRANA+ REPE+   WDD +++  ++ +N G+ FVLHDGPPYANG+L
Sbjct: 12  YKDTVLLPKTDFSMRANAVKREPELQAFWDDSKIYETLSQENSGDVFVLHDGPPYANGSL 71

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNK+LKDIIN+Y+LL++ KVRYVPGWDCHGLPIELKVLQ++D   + +LTP +LR
Sbjct: 72  HMGHALNKVLKDIINKYQLLRDRKVRYVPGWDCHGLPIELKVLQTIDRKERANLTPLELR 131

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA +FA  TV+ Q   F+R+GVW +W  PY+TL PEYEAAQ++VFGQM L+GYIYRG K
Sbjct: 132 QKAKEFALDTVEKQAKGFRRFGVWGNWEKPYMTLQPEYEAAQLDVFGQMVLKGYIYRGLK 191

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
            VHWSPSS+TALAEAELEYPEGH S SIY  F MVSA  +    L+ +L +LG+A+WTTT
Sbjct: 192 SVHWSPSSQTALAEAELEYPEGHTSPSIYVGFPMVSASDTAEKALSPYLDNLGVAIWTTT 251

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN AVAVN+ L Y VVE+       S AP                 ++IV  DLV
Sbjct: 252 PWTIPANVAVAVNSDLVYTVVEVA------SGAPYK---------------YLIVGKDLV 290

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVD------NRQCPVVIGGDYITTESGTGLV 459
            TL   + T L  K  + G+DL    Y HP+       NR+ P+VIGGDYITTESGTGLV
Sbjct: 291 ETLANVFETDLTPKVDINGADLAGSTYHHPLHSKEDTFNRESPIVIGGDYITTESGTGLV 350

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG ED+    KYGLPIL PVD+ G FT EAG F GL+VL   N A++K L E  +
Sbjct: 351 HTAPGHGMEDFGVGQKYGLPILCPVDERGNFTAEAGSFEGLNVLKTANEALIKALTEANT 410

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           L+  EPY HKYPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V+W+P Q
Sbjct: 411 LLKHEPYVHKYPYDWRTKKPTIFRATEQWFASVEGFRDEALKAISDVQWIPAQ 463



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 96/208 (46%), Positives = 144/208 (69%), Gaps = 9/208 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q++D+YRK+R T R+LLGNL+D+    +
Sbjct: 642 KQDPPYGADVLRLWVSSVDYSSDVPIGKNILKQLADVYRKIRNTSRFLLGNLYDFDPAKD 701

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++ YD +P +DQY L ++  I   +  ++++YQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 702 AVPYDQMPSLDQYMLHRMTEIFAEVESAFDTYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 761

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RRSCQTVL+  L ++ + IAP+L H+AED+WQ +P+    E G+ +  VF
Sbjct: 762 LYISDAVSQRRRSCQTVLAVALENLAKSIAPVLCHMAEDIWQFMPY----ETGTKS--VF 815

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           E+ W  +D +W+   + +   W ++ E+
Sbjct: 816 EAGWLKIDPQWKKPELADT--WNQLREL 841


>gi|354552275|ref|ZP_08971583.1| Isoleucyl-tRNA synthetase [Cyanothece sp. ATCC 51472]
 gi|353555597|gb|EHC24985.1| Isoleucyl-tRNA synthetase [Cyanothece sp. ATCC 51472]
          Length = 940

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 282/454 (62%), Positives = 340/454 (74%), Gaps = 20/454 (4%)

Query: 119 MRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDI 178
           MRANA+ REPE+ K W D+Q++ +++ +N  E FVLHDGPPYANG+LHMGHALNK LKDI
Sbjct: 1   MRANAVKREPELQKFWADNQIYEKLSQENPEEVFVLHDGPPYANGSLHMGHALNKTLKDI 60

Query: 179 INRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKA 238
           IN+YKLL+ YKVRYVPGWDCHGLPIELKVLQS+    ++ LTP KLR KA  FA  T + 
Sbjct: 61  INKYKLLRGYKVRYVPGWDCHGLPIELKVLQSMKSKEREGLTPLKLRHKARDFALKTQEE 120

Query: 239 QMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALA 298
           Q   FKR+GVW DW NPYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALA
Sbjct: 121 QAKGFKRFGVWGDWENPYLTLTPEYEAAQIGVFGEMALKGYIYRGLKPVHWSPSSQTALA 180

Query: 299 EAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVN 358
           EAELEYPEGH SRSI+A F ++ A   T  +L  FL  LG+A+WTTTPWT+P N AVA+N
Sbjct: 181 EAELEYPEGHTSRSIFAAFPIIKASKDTEEILQPFLNKLGVAIWTTTPWTLPGNLAVALN 240

Query: 359 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVI 418
             L YAVVE  S                 +V   Q   ++IVA+DLV  L   + T+L +
Sbjct: 241 PDLNYAVVEQNS-----------------DVCNYQ---YLIVAADLVERLSTTFETELTV 280

Query: 419 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 478
           K TL G  LE+  Y HP+ +R+  ++IGGDY+TTESGTGLVHTAPGHGQEDY+   +YGL
Sbjct: 281 KATLPGKALEHTIYRHPLYDRESEILIGGDYVTTESGTGLVHTAPGHGQEDYMVGQRYGL 340

Query: 479 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 538
            ILSPVD +G FTEEA +F+GL+VL D N  ++  L E+ SL+ EE Y+HKYPYDWRTKK
Sbjct: 341 GILSPVDAKGNFTEEARQFAGLNVLKDANEVIINELKEKGSLLKEEAYQHKYPYDWRTKK 400

Query: 539 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           PTIFRATEQWFASV+GFR AA+ AI  V+W+P Q
Sbjct: 401 PTIFRATEQWFASVKGFRDAALTAIKTVQWIPAQ 434



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 96/205 (46%), Positives = 139/205 (67%), Gaps = 9/205 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+Q+SDIYRK+R T R+LLGNLHD+    +
Sbjct: 613 KQEPPYGADVLRLWVSSVDYSSDVPIGKTILKQLSDIYRKIRNTARFLLGNLHDFDPKKD 672

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++SY++LP +D+Y L ++  +   + +++E+YQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 673 TVSYEELPELDRYMLHRITEVFTEVTDAFETYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 732

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RRSCQTVL+  + ++ + IAP+L H+AED+WQ LP+       +  + VF
Sbjct: 733 LYISHPESIRRRSCQTVLAIAIENLAKAIAPVLCHMAEDIWQFLPYE------TPYKSVF 786

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKI 775
            + W    ++W    +     W KI
Sbjct: 787 TAGWVKTSKQWENSELSAS--WAKI 809


>gi|158337034|ref|YP_001518209.1| isoleucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|189082318|sp|B0C872.1|SYI_ACAM1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|158307275|gb|ABW28892.1| isoleucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 971

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 282/471 (59%), Positives = 342/471 (72%), Gaps = 26/471 (5%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E GRYK TV+LPKT F MRANA+ REPE+ K W DHQ++  ++  N G+ FVLHDGPPYA
Sbjct: 3   EPGRYKKTVNLPKTKFDMRANAVKREPELQKFWADHQIYENLSQNNPGDVFVLHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKD IN+++LLQ  KVRYVPGWDCHGLPIELKVLQ++  + +  LTP
Sbjct: 63  NGDLHIGHALNKILKDTINKFQLLQGRKVRYVPGWDCHGLPIELKVLQNIQPENRAKLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            KLR KA  FA  TV+ Q  SF+RYGVW +W NPYLTL PEYEAAQI VFG+M+L+GYIY
Sbjct: 123 LKLRWKARDFALKTVEKQSKSFQRYGVWGNWENPYLTLKPEYEAAQIGVFGKMALKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPV+WSPSS+TALAEAELEYPEGH SRSIY  F++     +   LL+E+LP L +A+
Sbjct: 183 RGFKPVYWSPSSQTALAEAELEYPEGHTSRSIYVTFKVTGLSETAQPLLDEYLPTLKVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AV++N  L YAVV+                           + ++IVA
Sbjct: 243 WTTTPWTIPGNLAVSLNPDLTYAVVKA-------------------------GEDYLIVA 277

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            DLV TL     +   + KTL G  LEN  Y HP+  R+ P+V+ GDY+TTESGTGLVHT
Sbjct: 278 EDLVETLTETLESSFKVIKTLPGKALENSTYQHPLFEREGPLVL-GDYVTTESGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY    +YGL +LSPVD +G FT+EAG F+GL+VL  GN AV++ L    +L+
Sbjct: 337 APGHGQEDYQVGQQYGLAMLSPVDGDGTFTDEAGPFAGLNVLNGGNEAVIEALQSAGALL 396

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EE Y HKYPYDWRTKKP I RATEQWFASV+GFR+A +DAI  V W+P Q
Sbjct: 397 KEESYAHKYPYDWRTKKPVILRATEQWFASVDGFREAVLDAIATVNWIPAQ 447



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 95/193 (49%), Positives = 138/193 (71%), Gaps = 7/193 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY  DV +G  +L+QM+D+YRK+R T R+LLGNLHD+    +
Sbjct: 626 KQDPPYGADVLRLWVSSVDYASDVPLGKNILKQMADVYRKIRNTSRFLLGNLHDFDPAQD 685

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y+DLP +D+Y L ++  +  ++ E++ES+QFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 686 AVAYEDLPQLDRYMLHRITEVFTDVTEAFESFQFFRFFQTVQNFCVVDLSNFYLDIAKDR 745

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +  RRSCQTVL+  L ++ R IAP+L H+AED+WQ+LP+       +  + VF
Sbjct: 746 LYISEPNAQRRRSCQTVLAIALENLARAIAPVLSHMAEDIWQSLPYE------TEHQSVF 799

Query: 751 ESKWPVLDEKWRT 763
            S W  L+++W  
Sbjct: 800 ASGWMRLEDQWHN 812


>gi|84029572|sp|Q8DGI7.2|SYI_THEEB RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
          Length = 953

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 281/467 (60%), Positives = 337/467 (72%), Gaps = 21/467 (4%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+TTF MRANA  REP++   W  H+++  +   N GE F+LHDGPPYANG L
Sbjct: 8   YKDTVNLPQTTFEMRANAATREPQLQAFWAQHKIYETLQQTNPGEVFILHDGPPYANGAL 67

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+Y+LL+  KV Y PGWDCHGLPIELKVLQ+L  + +  LTP  LR
Sbjct: 68  HIGHALNKILKDIINKYQLLRGRKVHYRPGWDCHGLPIELKVLQNLKPEQRAQLTPLTLR 127

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            +A +FA  TV  Q  SF+RYGVW DW +PYLTL P+YEAAQI VFG+M L+GYIYRG K
Sbjct: 128 QQAKEFALKTVAEQKQSFQRYGVWGDWAHPYLTLTPDYEAAQIGVFGEMVLRGYIYRGLK 187

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH SRS+YA F ++  P   +      L  LG+A+WTTT
Sbjct: 188 PVHWSPSSKTALAEAELEYPEGHTSRSLYAAFEVIELPQGLAKAWYNALGKLGVAIWTTT 247

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN AV+VN  L YA+VE+Q                       ++   +IVA DLV
Sbjct: 248 PWTIPANLAVSVNPDLTYALVEVQP---------------------SERYKHLIVAKDLV 286

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L    G  L +  T  G+DLE+ RY HP+  R+  ++IGGDY+TTESGTGLVHTAPGH
Sbjct: 287 ERLSDTLGRTLKVVATAKGADLEHSRYRHPLFEREGKILIGGDYVTTESGTGLVHTAPGH 346

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           G EDY    +YGLPILSPVD+ G FT EAG F+GL+VL +GN AV+  L E  +L+ EEP
Sbjct: 347 GLEDYGVGQRYGLPILSPVDENGCFTAEAGPFAGLNVLQEGNAAVIAALQECGALLKEEP 406

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           Y HKYPYDWRTKKPTIFRATEQWFASVEGFR AA+ AI +VKW+P Q
Sbjct: 407 YVHKYPYDWRTKKPTIFRATEQWFASVEGFRDAALRAIAEVKWIPAQ 453



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 98/192 (51%), Positives = 131/192 (68%), Gaps = 7/192 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY  DV IG  +LRQ++D+YRK+R T R+LLGNLHD+    +
Sbjct: 627 KQDPPYGADVLRLWVSSVDYANDVPIGKNILRQLADVYRKIRNTARFLLGNLHDFEPEQD 686

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            I Y  LP +D+Y L +L  +   +  +++S+QF++ FQ IQ   +VDLSNFY D+AKDR
Sbjct: 687 MIPYAQLPALDRYMLHRLHEVFSEVTAAFDSFQFYRFFQTIQNLCVVDLSNFYLDIAKDR 746

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY    T   RRSCQTVL+  L ++ R IAP+LPHLAED+WQ+LPF       +    VF
Sbjct: 747 LYISAATGDRRRSCQTVLAIALQNLARAIAPVLPHLAEDIWQHLPFK------TPYLSVF 800

Query: 751 ESKWPVLDEKWR 762
           +S W  L  +W+
Sbjct: 801 QSGWVQLSAQWQ 812


>gi|22299873|ref|NP_683120.1| isoleucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|22296058|dbj|BAC09882.1| isoleucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 981

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 281/467 (60%), Positives = 337/467 (72%), Gaps = 21/467 (4%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+TTF MRANA  REP++   W  H+++  +   N GE F+LHDGPPYANG L
Sbjct: 36  YKDTVNLPQTTFEMRANAATREPQLQAFWAQHKIYETLQQTNPGEVFILHDGPPYANGAL 95

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+Y+LL+  KV Y PGWDCHGLPIELKVLQ+L  + +  LTP  LR
Sbjct: 96  HIGHALNKILKDIINKYQLLRGRKVHYRPGWDCHGLPIELKVLQNLKPEQRAQLTPLTLR 155

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            +A +FA  TV  Q  SF+RYGVW DW +PYLTL P+YEAAQI VFG+M L+GYIYRG K
Sbjct: 156 QQAKEFALKTVAEQKQSFQRYGVWGDWAHPYLTLTPDYEAAQIGVFGEMVLRGYIYRGLK 215

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYPEGH SRS+YA F ++  P   +      L  LG+A+WTTT
Sbjct: 216 PVHWSPSSKTALAEAELEYPEGHTSRSLYAAFEVIELPQGLAKAWYNALGKLGVAIWTTT 275

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN AV+VN  L YA+VE+Q                       ++   +IVA DLV
Sbjct: 276 PWTIPANLAVSVNPDLTYALVEVQP---------------------SERYKHLIVAKDLV 314

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             L    G  L +  T  G+DLE+ RY HP+  R+  ++IGGDY+TTESGTGLVHTAPGH
Sbjct: 315 ERLSDTLGRTLKVVATAKGADLEHSRYRHPLFEREGKILIGGDYVTTESGTGLVHTAPGH 374

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           G EDY    +YGLPILSPVD+ G FT EAG F+GL+VL +GN AV+  L E  +L+ EEP
Sbjct: 375 GLEDYGVGQRYGLPILSPVDENGCFTAEAGPFAGLNVLQEGNAAVIAALQECGALLKEEP 434

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           Y HKYPYDWRTKKPTIFRATEQWFASVEGFR AA+ AI +VKW+P Q
Sbjct: 435 YVHKYPYDWRTKKPTIFRATEQWFASVEGFRDAALRAIAEVKWIPAQ 481



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 98/192 (51%), Positives = 131/192 (68%), Gaps = 7/192 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GN 630
           ++ P YGADVLRLWVSSVDY  DV IG  +LRQ++D+YRK+R T R+LLGNLHD+    +
Sbjct: 655 KQDPPYGADVLRLWVSSVDYANDVPIGKNILRQLADVYRKIRNTARFLLGNLHDFEPEQD 714

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            I Y  LP +D+Y L +L  +   +  +++S+QF++ FQ IQ   +VDLSNFY D+AKDR
Sbjct: 715 MIPYAQLPALDRYMLHRLHEVFSEVTAAFDSFQFYRFFQTIQNLCVVDLSNFYLDIAKDR 774

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY    T   RRSCQTVL+  L ++ R IAP+LPHLAED+WQ+LPF       +    VF
Sbjct: 775 LYISAATGDRRRSCQTVLAIALQNLARAIAPVLPHLAEDIWQHLPFK------TPYLSVF 828

Query: 751 ESKWPVLDEKWR 762
           +S W  L  +W+
Sbjct: 829 QSGWVQLSAQWQ 840


>gi|416383684|ref|ZP_11684493.1| Isoleucyl-tRNA synthetase [Crocosphaera watsonii WH 0003]
 gi|357265205|gb|EHJ13999.1| Isoleucyl-tRNA synthetase [Crocosphaera watsonii WH 0003]
          Length = 940

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 278/454 (61%), Positives = 340/454 (74%), Gaps = 20/454 (4%)

Query: 119 MRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDI 178
           MRANA+ REPE+ K W D+Q++ +++ +N  E FVLHDGPPYANG+LHMGHALNK LKDI
Sbjct: 1   MRANAVKREPELQKFWADNQIYEKLSQENPEEVFVLHDGPPYANGSLHMGHALNKTLKDI 60

Query: 179 INRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKA 238
           IN+YKL++ +KVRYVPGWDCHGLPIELKVLQS+    ++ LTP KLR KA+ FA  T + 
Sbjct: 61  INKYKLMRGHKVRYVPGWDCHGLPIELKVLQSMKSKERQGLTPLKLRRKASDFALKTQQE 120

Query: 239 QMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALA 298
           Q  +FKR+GVW +W +PYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALA
Sbjct: 121 QAKAFKRFGVWGNWEHPYLTLTPEYEAAQIGVFGEMALKGYIYRGLKPVHWSPSSQTALA 180

Query: 299 EAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVN 358
           EAELEYPEGH SRSI+A F ++         L  FL +LG+A+WTTTPWT+P N AVA+N
Sbjct: 181 EAELEYPEGHTSRSIFAAFPIIKVSKDLEETLKPFLNNLGVAIWTTTPWTLPGNLAVALN 240

Query: 359 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVI 418
             L YAVVE  S    D+                 K  ++IVA+DLV  L   + T+L +
Sbjct: 241 PDLNYAVVEQNS----DAC----------------KYQYLIVAADLVERLSTTFETELTV 280

Query: 419 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 478
           K TL G  LE+  Y HP+ +R+  ++IGGDY+TTESGTGLVHTAPGHGQEDY+   +YGL
Sbjct: 281 KATLPGKALEHTIYRHPLYDRESEILIGGDYVTTESGTGLVHTAPGHGQEDYLVGQRYGL 340

Query: 479 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 538
            +LSPVD +G FTEEAG+F+GL+VL D N  ++  L E+ SL+ EE Y+HKYPYDWRTKK
Sbjct: 341 GVLSPVDAKGNFTEEAGQFAGLNVLKDANEVIINELQEKGSLLKEEAYQHKYPYDWRTKK 400

Query: 539 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           PTIFRATEQWFASVEGFR AA+ AI  V WVP Q
Sbjct: 401 PTIFRATEQWFASVEGFRDAALTAIKTVNWVPSQ 434



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 93/208 (44%), Positives = 141/208 (67%), Gaps = 9/208 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGAD++RLWVSSVDY+ D+ IG  +L+Q+ DIYRK+R T R+LLGNLHD+    +
Sbjct: 613 KQEPPYGADLVRLWVSSVDYSSDIRIGKTILKQLFDIYRKIRNTARFLLGNLHDFDPKQH 672

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++SY++LP +D+Y L ++  +   + +++++YQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 673 TVSYEELPELDRYMLHRITEVFTEVTDAFDTYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 732

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RRSCQTVL+  + ++ + IAP+L H+AED+WQ  P+       +  + VF
Sbjct: 733 LYISHLESIRRRSCQTVLAVAIENLAKAIAPVLCHMAEDIWQFFPYE------TPYKSVF 786

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           E+ W    ++W    +G    W KI E+
Sbjct: 787 EAGWVKTSKQWENPELGAS--WTKIREI 812


>gi|67921387|ref|ZP_00514905.1| Isoleucyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
 gi|67856499|gb|EAM51740.1| Isoleucyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
          Length = 940

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 278/454 (61%), Positives = 340/454 (74%), Gaps = 20/454 (4%)

Query: 119 MRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDI 178
           MRANA+ REPE+ K W D+Q++ +++ +N  E FVLHDGPPYANG+LHMGHALNK LKDI
Sbjct: 1   MRANAVKREPELQKFWADNQIYEKLSQENPEEVFVLHDGPPYANGSLHMGHALNKTLKDI 60

Query: 179 INRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKA 238
           IN+YKL++ +KVRYVPGWDCHGLPIELKVLQS+    ++ LTP KLR KA+ FA  T + 
Sbjct: 61  INKYKLMRGHKVRYVPGWDCHGLPIELKVLQSMKSKERQGLTPLKLRRKASDFALKTQQE 120

Query: 239 QMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALA 298
           Q  +FKR+GVW +W +PYLTL PEYEAAQI VFG+M+L+GYIYRG KPVHWSPSS+TALA
Sbjct: 121 QAKAFKRFGVWGNWEHPYLTLTPEYEAAQIGVFGEMALKGYIYRGLKPVHWSPSSQTALA 180

Query: 299 EAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVN 358
           EAELEYPEGH SRSI+A F ++         L  FL +LG+A+WTTTPWT+P N AVA+N
Sbjct: 181 EAELEYPEGHTSRSIFAAFPIIKVSKDLEETLKPFLNNLGVAIWTTTPWTLPGNLAVALN 240

Query: 359 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVI 418
             L YAVVE  S    D+                 K  ++IVA+DLV  L   + T+L +
Sbjct: 241 PDLNYAVVEQNS----DAC----------------KYQYLIVAADLVERLSTTFETELTV 280

Query: 419 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 478
           K TL G  LE+  Y HP+ +R+  ++IGGDY+TTESGTGLVHTAPGHGQEDY+   +YGL
Sbjct: 281 KATLPGKALEHTIYRHPLYDRESEILIGGDYVTTESGTGLVHTAPGHGQEDYLVGQRYGL 340

Query: 479 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 538
            +LSPVD +G FTEEAG+F+GL+VL D N  ++  L E+ SL+ EE Y+HKYPYDWRTKK
Sbjct: 341 GVLSPVDAKGNFTEEAGQFAGLNVLKDANEVIINELQEKGSLLKEEAYQHKYPYDWRTKK 400

Query: 539 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           PTIFRATEQWFASVEGFR AA+ AI  V WVP Q
Sbjct: 401 PTIFRATEQWFASVEGFRDAALTAIKTVNWVPSQ 434



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 94/208 (45%), Positives = 142/208 (68%), Gaps = 9/208 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGAD++RLWVSSVDY+ D+ IG  +L+Q+ DIYRK+R T R+LLGNLHD+    +
Sbjct: 613 KQEPPYGADLVRLWVSSVDYSSDIRIGKTILKQLFDIYRKIRNTARFLLGNLHDFDPKQH 672

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++SY++LP +D+Y L ++  +   + +++++YQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 673 TVSYEELPELDRYMLHRITEVFTEVTDAFDTYQFFRFFQTVQNFCVVDLSNFYLDIAKDR 732

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RRSCQTVL+  + ++ + IAP+L H+AED+WQ LP+       +  + VF
Sbjct: 733 LYISHLESIRRRSCQTVLAVAIENLAKAIAPVLCHMAEDIWQFLPYE------TPYKSVF 786

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           E+ W    ++W    +G    W KI E+
Sbjct: 787 EAGWLKTSKQWENPELGAS--WTKIREI 812


>gi|443316714|ref|ZP_21046148.1| Isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 6406]
 gi|442783681|gb|ELR93587.1| Isoleucyl-tRNA synthetase [Leptolyngbya sp. PCC 6406]
          Length = 986

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 284/475 (59%), Positives = 340/475 (71%), Gaps = 29/475 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK T+ LP+TTF MRANA  REPEI + W D Q++  +A  N G  FVLHDGPPYANG+L
Sbjct: 25  YKDTILLPQTTFDMRANAPQREPEIQQFWADQQIYETLAQSNPGAPFVLHDGPPYANGDL 84

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDI+N+Y++LQ  KVRY+PGWDCHGLPIELKVLQ++D D + +LTP KLR
Sbjct: 85  HIGHALNKILKDIVNKYQILQGRKVRYIPGWDCHGLPIELKVLQAMDSDTRANLTPIKLR 144

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA  T++ Q A FKRYGVW DW+ PY+TL PEYEAAQI VFGQM L+GYIYRG K
Sbjct: 145 KKAKAFALKTIERQRAGFKRYGVWGDWDTPYMTLQPEYEAAQIGVFGQMYLKGYIYRGLK 204

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
            VHWSP+S+TALAEAELEYPEGH S SIYA F +V A  +    L  +  +LG+A+WTTT
Sbjct: 205 SVHWSPTSQTALAEAELEYPEGHTSPSIYAAFPLVEASAAAKATLAPYGENLGVAIWTTT 264

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN AVAVN  L YAVV +           A+ K  P          ++++A DL 
Sbjct: 265 PWTIPANLAVAVNGDLTYAVVAV-----------ASGKPFP----------YLLIAKDLC 303

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNR--------QCPVVIGGDYITTESGTG 457
             L    GT+L +K  L GSDLE C Y HP+ ++          PV++GGDYITTESGTG
Sbjct: 304 DRLSQVLGTELTLKAELKGSDLEGCTYRHPLQDQLPTDKRGETSPVIVGGDYITTESGTG 363

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
           LVHTAPGHGQED+    +YGL +L PVD+ G  T EAG F+GL+VL D N AV++ L   
Sbjct: 364 LVHTAPGHGQEDFQVGQRYGLSVLCPVDERGDMTAEAGPFAGLNVLKDANPAVIEALQTA 423

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            SL+ +EPY HKYPYDWRTKKPTIFRATEQWFASV GFR  AM AI  V+W+P Q
Sbjct: 424 GSLLKQEPYVHKYPYDWRTKKPTIFRATEQWFASVAGFRDEAMAAIRSVQWIPAQ 478



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 94/191 (49%), Positives = 137/191 (71%), Gaps = 7/191 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLW SSVDY+ DV +G  +L+QM+D+YRK+R T R+LLGNLHD+    N
Sbjct: 657 KQDPPYGADVLRLWASSVDYSSDVPLGSNILKQMADVYRKIRNTARFLLGNLHDFDPAQN 716

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++Y DLP +D+Y L ++  +   +++++++YQFF+ FQ IQ F +VDLSNFY D AKDR
Sbjct: 717 AVAYGDLPELDRYMLHRMTEVFAEVKDAFDTYQFFRFFQTIQNFCVVDLSNFYLDTAKDR 776

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY  G  S  RRSCQTVL+  + ++ R +AP+L H+AED+WQNLP+       ++   VF
Sbjct: 777 LYISGADSPRRRSCQTVLAIAIENLARAVAPVLSHMAEDIWQNLPYP------TSHTSVF 830

Query: 751 ESKWPVLDEKW 761
           +S W  ++ +W
Sbjct: 831 QSGWVEMEAQW 841


>gi|308802504|ref|XP_003078565.1| isoleucyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116057018|emb|CAL51445.1| isoleucyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 1011

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 290/498 (58%), Positives = 360/498 (72%), Gaps = 28/498 (5%)

Query: 74  GDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKL 133
           G    +S+ RR RG +    +A+ GEKKE+  Y  TV LPKT+F MRAN++V+EP++ + 
Sbjct: 23  GRTASASATRRGRGTIA---RASGGEKKEKNAYGETVRLPKTSFEMRANSVVKEPKMQEW 79

Query: 134 WDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYV 193
           W +  V+  + D+ DGE FVLHDGPPYANG+LH+GHALNKILKD +NR++++   KVR+V
Sbjct: 80  WRERGVYETLRDR-DGEAFVLHDGPPYANGDLHIGHALNKILKDFVNRWEMMNGKKVRFV 138

Query: 194 PGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWN 253
           PGWDCHGLPIELKVLQS+D +A+K+LTP KLR KA  FA+ TVKAQ   FKRYGVWADW 
Sbjct: 139 PGWDCHGLPIELKVLQSMDAEARKNLTPIKLRYKAKAFAEKTVKAQREQFKRYGVWADWE 198

Query: 254 NPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSI 313
           +PY+TL PEYEAAQ+EVFG M L G+IYRGKKPVHWSPSS TALAEAELEYPEGH S+SI
Sbjct: 199 DPYMTLLPEYEAAQMEVFGSMFLNGHIYRGKKPVHWSPSSMTALAEAELEYPEGHFSQSI 258

Query: 314 YAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLE 373
           Y  F +   P ST   L + L D  LA+WTTTPWT+PANAAVAVNAKL Y+V  ++S   
Sbjct: 259 YVAFPVSEVPDSTPSALRDLLKDASLAIWTTTPWTMPANAAVAVNAKLDYSVCRVEST-- 316

Query: 374 GDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYV 433
                        G  L        +VA  L   + AK  ++L    T  G D EN +Y 
Sbjct: 317 -------------GKTL--------VVAEGLREAVAAKLESELTTLGTFKGQDFENVQYS 355

Query: 434 HPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEE 493
           HP   R+ PV+IGG+YITTE+GTGLVHTAPGHGQ+DY++ +KYGLP+ SPVD+ G FT E
Sbjct: 356 HPFYERKSPVIIGGEYITTETGTGLVHTAPGHGQDDYISGMKYGLPLYSPVDNAGLFTAE 415

Query: 494 A-GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASV 552
           A G   G DVLGDGNV  ++ L+   +L+  E Y HKYPYDWRTKKPTIFRATEQWFASV
Sbjct: 416 AGGDLEGKDVLGDGNVLCIEKLETAGALLKREKYGHKYPYDWRTKKPTIFRATEQWFASV 475

Query: 553 EGFRQAAMDAIGQVKWVP 570
           EGFR+ A+  + +++++P
Sbjct: 476 EGFREDALKELDKLQFIP 493



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 88/207 (42%), Positives = 128/207 (61%), Gaps = 5/207 (2%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           ++ PGYGAD LRLWV+S DY+GDV IG  +++Q S+ YRKLRGT+R+ +G L D+     
Sbjct: 673 KQEPGYGADTLRLWVASTDYSGDVSIGMNIIKQTSEAYRKLRGTIRFAMGVLDDFNPAQQ 732

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + YDDLP+ D+Y L +L   VK I  SY+++ + ++   +  F    LSN Y DV+KD+L
Sbjct: 733 VPYDDLPVFDKYVLHRLNATVKEIESSYKAFDYSRVVSAVTSFTTF-LSNVYLDVSKDKL 791

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           Y G    F RR+CQTV+SA +  I+  IAP+ PH+AE+ +Q LP+    +  + A  VF 
Sbjct: 792 YIGAQDDFKRRACQTVVSALVERIIAAIAPLTPHMAEEAFQALPY----DKPNGAISVFI 847

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEV 778
           + WP     W      ++ FW   LE+
Sbjct: 848 AGWPSTPAAWSELDAKDVEFWDSFLEI 874


>gi|56751678|ref|YP_172379.1| isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81301246|ref|YP_401454.1| isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81820600|sp|Q5N1G1.1|SYI_SYNP6 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|56686637|dbj|BAD79859.1| isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81170127|gb|ABB58467.1| Isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 954

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 281/472 (59%), Positives = 340/472 (72%), Gaps = 27/472 (5%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK T++L +T F MRANA VREPEI + W D Q++  ++ +N G  FVLHDGPPYA
Sbjct: 3   EVSAYKDTLNLLQTPFNMRANAPVREPEIQQFWADRQIYETLSRQNPGAPFVLHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LHMGHALNK LKDIIN+Y+LLQ  KVRYVPGWDCHGLPIELKVLQ L  + +++LTP
Sbjct: 63  NGALHMGHALNKTLKDIINKYQLLQGRKVRYVPGWDCHGLPIELKVLQELSSEERRNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
             LR KA  +A A V+ Q  SF+RYGVWADW+ PYLTL PEYEAAQI+VFGQM L+GYIY
Sbjct: 123 LTLRQKAKAYALAQVEQQSQSFQRYGVWADWDAPYLTLTPEYEAAQIDVFGQMVLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSSRTALAEAELEYP+GH SRSIY    +V    +   LL  +  +L LA+
Sbjct: 183 RGLKPVHWSPSSRTALAEAELEYPDGHTSRSIYVAMPIVQLSEAAQPLLGNY-ANLALAI 241

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN AVAVN +L YAVV+      GD                      +IVA
Sbjct: 242 WTTTPWTIPANLAVAVNGELTYAVVQA-----GD--------------------CHLIVA 276

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++L  +L   + T+L +  T  GS LE+ RY HP+ +R+ PVVIGGDYITTESGTGLVHT
Sbjct: 277 AELAESLSKTFATELTVLATFPGSVLEHSRYRHPLYDRESPVVIGGDYITTESGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSL 520
           APGHGQ+D++   +YGL +  PVDD+G FT   G +  G +VL D N AV+++L E  +L
Sbjct: 337 APGHGQDDFIVGNRYGLEVFCPVDDKGDFTAAVGDRLVGKNVLKDANAAVIEWLTEVGAL 396

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           + EE Y H+YPYDWRTKKPTIFRATEQWFASVEGFR+ A+ AI +V W+P Q
Sbjct: 397 LKEESYAHRYPYDWRTKKPTIFRATEQWFASVEGFREQALQAIAEVDWIPAQ 448



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 92/191 (48%), Positives = 135/191 (70%), Gaps = 7/191 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +L+QM+D+YRK+R T R+LLGNLHD+    +
Sbjct: 627 KQEPPYGADVLRLWVSSVDYSSDVPIGKNILKQMADVYRKIRNTARFLLGNLHDFDPAKD 686

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++ ++ LP +D+Y L +L  ++  I++++ES+QFF+ FQ +Q F +VDLSNFY D+ KDR
Sbjct: 687 ALPWEKLPELDRYLLHRLREVILEIQDAFESFQFFRFFQTVQNFCVVDLSNFYLDIGKDR 746

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RRSCQTVL+  + ++   IAP+L H+AED+WQ+LP+       +  + VF
Sbjct: 747 LYISAPDSLRRRSCQTVLAICVEALATAIAPVLSHMAEDIWQSLPYP------ARTKSVF 800

Query: 751 ESKWPVLDEKW 761
           ++ W  L + W
Sbjct: 801 QAGWVQLQDDW 811


>gi|86606359|ref|YP_475122.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86554901|gb|ABC99859.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 936

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 281/473 (59%), Positives = 338/473 (71%), Gaps = 31/473 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK T++LP+T F MRA A  REP I   W + Q++ R+++ N G+ FVLHDGPPYANG++
Sbjct: 3   YKSTLNLPQTQFPMRAEAAKREPAIQAFWQEEQIYQRLSENNPGDPFVLHDGPPYANGDI 62

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMG  LNKILKDIIN+Y LLQ  KVRYVPGWDCHGLPIELKVLQSL    ++ LTP +LR
Sbjct: 63  HMGTTLNKILKDIINKYHLLQGRKVRYVPGWDCHGLPIELKVLQSLSPQERQSLTPLQLR 122

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA ++A   V  Q ASF+R GVW DW+ PYLTL PEYEAAQIEVFGQM+L+GYIYRG K
Sbjct: 123 QKAREYALHYVNVQRASFQRLGVWGDWDRPYLTLSPEYEAAQIEVFGQMALKGYIYRGLK 182

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYP+ H+S SIY  F + S  P+   +L  FLP L  A+WTTT
Sbjct: 183 PVHWSPSSQTALAEAELEYPDNHISPSIYVAFPLQSLSPAAQPILEPFLPGLRAAIWTTT 242

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN A+  N KL YAVVE                 R G          +++A+DL 
Sbjct: 243 PWTIPANLALCFNPKLTYAVVE---------------SPRFG---------LLLIAADLR 278

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             LE    T L +K TL GS LE C+  HP+ +R    V+ GDY+TTESGTG+VHTAPGH
Sbjct: 279 QRLEKVLETPLEVKATLPGSALEYCQGRHPLFDRSSLCVL-GDYVTTESGTGIVHTAPGH 337

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLG-----DGNVAVVKYLDEQMS 519
           G+ED+ T  KYGLPILSPVD++G+FT EAG +F GLDVL       GN+AV+K L    +
Sbjct: 338 GEEDFKTGQKYGLPILSPVDEQGRFTAEAGSQFVGLDVLSKEPETSGNLAVIKALRAVGA 397

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           L+ EEPY HKYPYDWRTK+PTIFRATEQWFASV GFR+ A+ AI  VKW+PP+
Sbjct: 398 LLKEEPYNHKYPYDWRTKEPTIFRATEQWFASVAGFRELALQAIKTVKWIPPE 450



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 96/193 (49%), Positives = 129/193 (66%), Gaps = 7/193 (3%)

Query: 571 PQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VG 629
           PQ  P YGADVLRLWVSSVDY+GDV IG  +L QM+D+YRK+R T R+LL NL+D+    
Sbjct: 627 PQTDPAYGADVLRLWVSSVDYSGDVPIGKTILGQMADVYRKIRNTARFLLSNLYDFNPAQ 686

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
           +++ ++ L  +D+Y L +L+ +   I ES+E+YQF++ FQ +Q F +VDLSNFY D+ KD
Sbjct: 687 DAVPFEALTELDRYILHRLQEVGAEITESFENYQFYRFFQAVQNFCVVDLSNFYLDIGKD 746

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 749
           RLY     S  RR CQTVLS  L ++ + IAP+L HLAE++W  LP+            V
Sbjct: 747 RLYISHARSLRRRQCQTVLSLVLENLAKAIAPVLSHLAEEIWSYLPYP------KPTRSV 800

Query: 750 FESKWPVLDEKWR 762
           FE  W  L E+WR
Sbjct: 801 FEGGWMRLPEQWR 813


>gi|428176696|gb|EKX45579.1| hypothetical protein GUITHDRAFT_71180 [Guillardia theta CCMP2712]
          Length = 988

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 287/485 (59%), Positives = 344/485 (70%), Gaps = 37/485 (7%)

Query: 94  KAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFV 153
           K   G  +EEG Y  TV+LP T F  RAN++VREPEI K W++++++ ++ + N G  FV
Sbjct: 10  KKKGGNDEEEGIYSSTVNLPVTNFQQRANSVVREPEIQKFWEENRIYEKLYESNPGTKFV 69

Query: 154 LHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDE 213
           LHDGPPYANGNLH+GHALNKILKD INRYK++  +KV++VPGWDCHGLPIELKVLQSL +
Sbjct: 70  LHDGPPYANGNLHIGHALNKILKDFINRYKVISGHKVKFVPGWDCHGLPIELKVLQSLKK 129

Query: 214 DAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQ 273
           + K+++TP  LR KAA+FAK TV  Q  SFKRYGVWADW+ PYLTLDP+YEAAQIE FG 
Sbjct: 130 EEKENMTPISLRKKAAEFAKQTVDQQRESFKRYGVWADWSEPYLTLDPKYEAAQIETFGA 189

Query: 274 MSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF 333
           M   G+IYRG+KPV+WSPSSRTALAEAELEYPEGH SRS+YA F +V   PS +  +   
Sbjct: 190 MLKGGHIYRGRKPVNWSPSSRTALAEAELEYPEGHKSRSMYAAFTVVE--PSEA--VKPH 245

Query: 334 LPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQ 393
             +L +A+WTTTPWT+PAN AVAVN KL+Y++VE                          
Sbjct: 246 SENLKVAIWTTTPWTIPANLAVAVNEKLEYSIVE-------------------------H 280

Query: 394 KKVFIIVASDLVPTLEAKWG------TKLVIKKTLAGSDLENCRYVHPV-DNRQCPVVIG 446
             V  +VA DL   L AK         +L     + G +L   +Y HP+   R  PVVIG
Sbjct: 281 HGVKYVVAKDLKGALAAKLKKGEEDEVELKEIAVITGKELAGTKYQHPLYKERINPVVIG 340

Query: 447 GDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGD 505
           GDYITTESGTGLVHTAPGHG EDY T LKYGL +LSPVDD G+FT EAG    G DVL D
Sbjct: 341 GDYITTESGTGLVHTAPGHGVEDYQTGLKYGLELLSPVDDAGRFTAEAGPLLEGKDVLKD 400

Query: 506 GNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQ 565
           GN  V++ ++E  +LI EE Y HKYPYDWRTKKPTIFRAT+QWFASVE FR+ AM AI  
Sbjct: 401 GNERVLELMEEAGALIKEEEYGHKYPYDWRTKKPTIFRATDQWFASVENFREKAMGAIDT 460

Query: 566 VKWVP 570
           VKW+P
Sbjct: 461 VKWIP 465



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 91/185 (49%), Positives = 127/185 (68%), Gaps = 8/185 (4%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P +GAD LRLWV+SVDYTGDV +G  +++Q+SD YRK+R TLRYLLGNLH +    +S+ 
Sbjct: 652 PAFGADTLRLWVASVDYTGDVRVGGNIMKQISDSYRKIRNTLRYLLGNLHGFDPKKHSVK 711

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
           Y+DLP +D++ L +L  + + +R++Y+++QF++ +Q I +  I +LSNFY D+AKDRLY 
Sbjct: 712 YEDLPSVDKWMLGRLARVQEEVRDAYDTFQFYRAYQAILQVCITELSNFYLDIAKDRLYI 771

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQTVL A L  +   I+P+LPH+AED WQNLP+ +          VFE  
Sbjct: 772 SAEDDVRRRSCQTVLHAALEMLTTAISPMLPHMAEDAWQNLPWEHV-------SSVFEHG 824

Query: 754 WPVLD 758
           W  LD
Sbjct: 825 WKQLD 829


>gi|298712913|emb|CBJ33425.1| Isoleucyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 1060

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 277/473 (58%), Positives = 345/473 (72%), Gaps = 28/473 (5%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYAN 162
           E  YK TV LP+T F  RANA+ REPE+   WD+ +++ RV D N GE +VLHDGPPYAN
Sbjct: 75  ESYYKKTVILPQTGFEQRANAVKREPELQAFWDEERIYERVLDDNTGEKYVLHDGPPYAN 134

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G+LH+GHALNKILKD INRY++L+  KV YVPGWDCHGLPIELKVLQS+  + ++ +TP 
Sbjct: 135 GDLHIGHALNKILKDFINRYQMLRGRKVGYVPGWDCHGLPIELKVLQSMKSNERRGMTPV 194

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           +LR KAA+FA+ TV  Q ASF+RYGVW D+  PYLTL PEYEAAQIEVFG+M  +G+I+R
Sbjct: 195 QLRKKAAEFARNTVSKQSASFRRYGVWGDFEKPYLTLQPEYEAAQIEVFGKMFTEGHIFR 254

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G+KPV+WSPSSRTALAEAELEYP GH S S+YA F +  A P+    +      L ++VW
Sbjct: 255 GRKPVNWSPSSRTALAEAELEYPAGHTSTSVYAAFEVKEATPALEKYMGSG-GGLAVSVW 313

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN AVAV+  ++Y+VVE  S                   L D+K   ++VA+
Sbjct: 314 TTTPWTLPANLAVAVSETIRYSVVEHAS-------------------LGDRK---LLVAT 351

Query: 403 DLVPTLEAKWGTK----LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           DLV  + AK G +    L + +T  G DL   +Y HP+ +R   VV+GGDYITTE+GTGL
Sbjct: 352 DLVGAVSAKIGLEEGDTLKVVETFTGKDLIGTKYQHPLCDRVSEVVVGGDYITTETGTGL 411

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQ 517
           VHTAPGHGQEDYVT  KYGLP+LSPVDD G+FT EAG +F GL+VL +GN  V+  L+E 
Sbjct: 412 VHTAPGHGQEDYVTGQKYGLPLLSPVDDAGRFTVEAGDRFKGLNVLKEGNEEVLVALEEA 471

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             L+  E Y+HKYPYDWRTKKPTIFRAT+QWFASV+ FR  A+ AI +V+W+P
Sbjct: 472 GGLLAREAYQHKYPYDWRTKKPTIFRATDQWFASVDRFRDTALSAIEKVQWIP 524



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 96/184 (52%), Positives = 131/184 (71%), Gaps = 5/184 (2%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+GDV +G Q+++Q S+ YRKLR TLRYL G+L D+    +
Sbjct: 705 KQKPAYGADVLRLWVSSVDYSGDVCVGDQIIKQASESYRKLRNTLRYLTGSLFDFDPEKD 764

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           S+ Y+DLP +D+Y L  L ++++ +  +++ YQF+K  Q++QRF   DLSNFY D AKDR
Sbjct: 765 SVPYEDLPSLDKYMLGMLSSVLEEVENAFDGYQFYKASQVLQRFATADLSNFYLDGAKDR 824

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY   +  F RRSCQTVL   L+S+   +APILPH+AEDVWQ LPF    E G  +  +F
Sbjct: 825 LYISSSDDFRRRSCQTVLHTMLMSLSTAMAPILPHMAEDVWQTLPF--KPEGGQRS--IF 880

Query: 751 ESKW 754
           ++ W
Sbjct: 881 QAGW 884


>gi|116075644|ref|ZP_01472903.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116066959|gb|EAU72714.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 978

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 270/476 (56%), Positives = 337/476 (70%), Gaps = 35/476 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK T++L +T FGMRANA  REP++   W +  +  R+ ++N GE F LHDGPPYANG L
Sbjct: 25  YKQTLNLLETGFGMRANATQREPQLQTFWKEQGIDQRLGEENTGEPFTLHDGPPYANGAL 84

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNK+LKDIIN+++++Q  KVRYVPGWDCHGLPIELKVLQ +D++ +K LTP KLR
Sbjct: 85  HMGHALNKVLKDIINKHRVMQGRKVRYVPGWDCHGLPIELKVLQGMDQEQRKALTPVKLR 144

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KAA +A+  V  QMA FKR+G+WADW NPYLTL  +YEAAQIEVFG M+L+G+IYRG K
Sbjct: 145 KKAAAYARKQVDGQMAGFKRWGIWADWENPYLTLQKDYEAAQIEVFGAMALKGHIYRGLK 204

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF---LPDLG---- 338
           PVHWSPSSRTALAEAELEYP+GH S S+Y  F  V+ P +    L +    LP  G    
Sbjct: 205 PVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPAVALPDALRQSLGQQGLELPADGDALG 264

Query: 339 ----LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQK 394
               +++WTTTPWT+PAN AV+VN +L YA+                          D +
Sbjct: 265 DVLQVSIWTTTPWTLPANLAVSVNDRLDYALC------------------------ADNR 300

Query: 395 KVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
              +IVA+DL   L AK+ T L  K  + G+DL   RY HP+  R+ PVV+GG+YITTES
Sbjct: 301 GRLLIVANDLRDALAAKFETTLETKAVVKGADLAGLRYRHPLLERESPVVVGGEYITTES 360

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           GTGLVHTAPGHG +D+ T  K+GLP+L PVD+ G  T+EAG F GL+VL D N  +V+ L
Sbjct: 361 GTGLVHTAPGHGVDDFNTGRKHGLPVLCPVDEAGTLTDEAGPFVGLNVLKDANPTIVEAL 420

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++  +L+  E Y H+YPYDWRTKKPTIFRATEQWFASVEGFR  A++AI QV W+P
Sbjct: 421 EQSGALLKHESYGHRYPYDWRTKKPTIFRATEQWFASVEGFRSEALEAIDQVNWLP 476



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 90/193 (46%), Positives = 133/193 (68%), Gaps = 7/193 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +L Q++D+YRK+R T RYLLGNLHD+    +
Sbjct: 657 KQEPPYGADVLRLWVSSVDYSADVPIGAGILSQLADVYRKVRNTARYLLGNLHDFDPARD 716

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++ +DLP++D++ L +   ++ +I E++++Y+FF+ FQ++Q + + DLSNFY D+AKDR
Sbjct: 717 AVAIEDLPLLDRWMLQRTAVVLDSISEAFDNYEFFRFFQLLQNYCVSDLSNFYLDIAKDR 776

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY        RRSCQTV++  +  +   IAP+L H+AED+WQNLP+        A   VF
Sbjct: 777 LYVSAPNDRRRRSCQTVMALIIERLAGAIAPVLCHMAEDIWQNLPYPV------AEPSVF 830

Query: 751 ESKWPVLDEKWRT 763
              WP + + WR 
Sbjct: 831 RRGWPTVPDNWRN 843


>gi|86608501|ref|YP_477263.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557043|gb|ABD02000.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 942

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 277/471 (58%), Positives = 334/471 (70%), Gaps = 31/471 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK T++LP+T F MRA A  REP I   W + Q++ R+AD N G+ FVLHDGPPYANG++
Sbjct: 3   YKSTLNLPQTQFPMRAEAAKREPAIQAFWQEEQIYQRLADHNPGDPFVLHDGPPYANGDI 62

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMG  LNKILKDI+N+Y +LQ  KVRYVPGWDCHGLPIELKVLQSL    +++LTP +LR
Sbjct: 63  HMGTTLNKILKDIVNKYHILQGRKVRYVPGWDCHGLPIELKVLQSLTPQERENLTPLQLR 122

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA ++A   V  Q ASF+R GVW  W+ PYLTL PEYEAAQIEVFGQM+L+GYIYRG K
Sbjct: 123 QKAKEYALHYVDVQRASFQRLGVWGSWDRPYLTLSPEYEAAQIEVFGQMALKGYIYRGLK 182

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEYP+ H+S SIY  F + S  P+   +L  F+P L  A+WTTT
Sbjct: 183 PVHWSPSSQTALAEAELEYPDNHISPSIYVAFPLQSLSPAAQPVLEPFMPGLRAAIWTTT 242

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN A+  N KL YAVVE                 R G          +++A+DL 
Sbjct: 243 PWTIPANLALCFNPKLTYAVVE---------------SPRFG---------LLLIAADLR 278

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             LE    T L IK TL GS LE  +  HP+ +R    V+ GDY+TTESGTG+VHTAPGH
Sbjct: 279 ERLEKVLETPLEIKATLPGSALEYSQGRHPLFDRASLCVL-GDYVTTESGTGIVHTAPGH 337

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLG-----DGNVAVVKYLDEQMS 519
           G++D+ T  KYGLPILSPVDD+G+FT EAG +F GLDVL       GN AV++ L    +
Sbjct: 338 GEDDFKTGQKYGLPILSPVDDQGRFTAEAGSQFVGLDVLSKKPETSGNAAVIQALQAAGA 397

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ EEPY HKYPYDWRTK+PTIFRATEQWFASV GFR+ A+ AI  VKW+P
Sbjct: 398 LLKEEPYNHKYPYDWRTKEPTIFRATEQWFASVAGFRELALQAIKTVKWIP 448



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 101/209 (48%), Positives = 134/209 (64%), Gaps = 9/209 (4%)

Query: 571 PQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VG 629
           PQ  P YGADVLRLWVSSVDY+GDV +G  +L QM+D+YRK+R T R+LL NL+D+    
Sbjct: 627 PQTDPAYGADVLRLWVSSVDYSGDVPLGKTILGQMADVYRKIRNTARFLLSNLYDFNPTQ 686

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
           +++ +  L  +D+Y L +L  +   I ES+ SYQF++ FQ IQ F +VDLSNFY D+AKD
Sbjct: 687 DAVPFAALTELDRYILHRLHEVGSEIGESFASYQFYRFFQAIQNFCVVDLSNFYLDIAKD 746

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 749
           RLY     S  RR CQTVLS  L ++ + IAP+L HLAE++W +LP+            V
Sbjct: 747 RLYISHAQSLRRRQCQTVLSLLLENLAKAIAPVLSHLAEEIWSHLPYP------KPTRSV 800

Query: 750 FESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           FE  W  L E WR   +  I  W ++ EV
Sbjct: 801 FEGGWMKLPEHWRDPQLAAI--WEQLREV 827


>gi|255083528|ref|XP_002504750.1| predicted protein [Micromonas sp. RCC299]
 gi|226520018|gb|ACO66008.1| predicted protein [Micromonas sp. RCC299]
          Length = 954

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 272/466 (58%), Positives = 336/466 (72%), Gaps = 27/466 (5%)

Query: 119 MRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDI 178
           MRAN++ +EP I + W D++++ ++A++ D E F LHDGPPYANG+LH+GHALNKILKD 
Sbjct: 1   MRANSVTKEPAIQQWWADNKIYEQIAERADAEMFTLHDGPPYANGDLHIGHALNKILKDF 60

Query: 179 INRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKA 238
           +NRY++++  +VRYVPGWDCHGLPIELKVLQS+D DA+K LTP KLR KA  FA  TV  
Sbjct: 61  VNRYQMMKGKRVRYVPGWDCHGLPIELKVLQSIDADARKALTPIKLRKKARAFALKTVDK 120

Query: 239 QMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALA 298
           Q  +F+RYGVW DW +PYLTL PEYEAAQ+EVFGQM L G++YRGKKPVHWSPSS TALA
Sbjct: 121 QRDAFRRYGVWGDWEDPYLTLLPEYEAAQMEVFGQMFLNGHVYRGKKPVHWSPSSMTALA 180

Query: 299 EAELEYPEGHVSRSIYAVFRMVSA------PPSTSGLLNEFLPDLGLAVWTTTPWTVPAN 352
           EAELEYPEGHVS+S+Y  F +VS       P   + +L        LAVWTTTPWT+PAN
Sbjct: 181 EAELEYPEGHVSQSVYVAFPLVSGNIPDGFPAEHASVLEA---GASLAVWTTTPWTMPAN 237

Query: 353 AAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVF---IIVASDLVPTLE 409
           AAVAVN KL+Y+ V++                  G+V K+  ++    ++VA  LV  + 
Sbjct: 238 AAVAVNDKLEYSFVKVTGA--------------SGDVEKESSRMVGKTLVVAQGLVAEVA 283

Query: 410 AKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQED 469
             WG  L    T+ GS L    Y HP+  R  PVV GGDYITT+SGTGLVHTAPGHGQED
Sbjct: 284 TTWGLTLETLCTVPGSALVGFEYTHPMYGRASPVVAGGDYITTDSGTGLVHTAPGHGQED 343

Query: 470 YVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 528
           Y+T LK+GLP+LSPVDD+G FT+EAG    G  VL DGN A ++ L    +LI++EPY H
Sbjct: 344 YMTGLKFGLPLLSPVDDKGLFTDEAGDDLVGKSVLKDGNEACIEKLRHSDALILQEPYNH 403

Query: 529 KYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEA 574
           KYPYDWRTKKPTIFRATEQWFASVEGFR  A+  + ++++VP   A
Sbjct: 404 KYPYDWRTKKPTIFRATEQWFASVEGFRDEALAELDKIEFVPASGA 449



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 123/216 (56%), Gaps = 9/216 (4%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P +GAD LRLWV+S DYT DV+IG  +L+Q SD YRKLRGTLR+L+GN+ D+  + +++ 
Sbjct: 628 PAFGADTLRLWVASTDYTSDVLIGVNILKQTSDAYRKLRGTLRFLMGNIGDFDPLLDAVP 687

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
           YD LP  D+YAL +  +++  +  +Y ++Q+ ++   +Q F    LSN Y D +KDRLY 
Sbjct: 688 YDQLPSFDRYALRRTADMLAEMDRAYATHQYSQVTAQLQSFTAF-LSNVYLDASKDRLYV 746

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
              T   RR  QTV++  +  ++ V+API PH+AE+ +  LP+          E VF   
Sbjct: 747 ESPTGVPRRCAQTVVNEIVTRLLCVVAPIAPHMAEEAFTALPYK------PGHESVFLRG 800

Query: 754 WPVLDEKWRT-FPVGEIYFWGKILEVIVVVTYLNET 788
           W     +W       E  FW   L +   V    ET
Sbjct: 801 WVDAAPEWTAGMDDAEAGFWATALAIRGEVNRAIET 836


>gi|116072087|ref|ZP_01469355.1| isoleucyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116065710|gb|EAU71468.1| isoleucyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 973

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 268/489 (54%), Positives = 344/489 (70%), Gaps = 35/489 (7%)

Query: 93  KKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF 152
            K   G  +E   YK+T++L +T+FGMRANA+ REPE+   W +H +  ++   N G  F
Sbjct: 2   NKETRGAAEERPSYKNTLNLLQTSFGMRANAVTREPELQSFWAEHGIDFKLGLTNTGPTF 61

Query: 153 VLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD 212
            LHDGPPYANG LHMGHALNK+LKDI+N++++L+  +VR+VPGWDCHGLPIELKVLQS+D
Sbjct: 62  TLHDGPPYANGALHMGHALNKVLKDIVNKHQILKGRRVRFVPGWDCHGLPIELKVLQSMD 121

Query: 213 EDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFG 272
           ++ +K LTP KLR KAA +A+  V  QM  F+R+G+WADW+ PYL+L  EYEAAQI VFG
Sbjct: 122 QEQRKALTPIKLRKKAAAYARKQVDGQMKGFQRWGIWADWDQPYLSLQKEYEAAQIGVFG 181

Query: 273 QMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE 332
            M L+G+IYRG KPVHWSPSSRTALAEAELEYP+GH+S S+YA F  V  P +    L +
Sbjct: 182 DMVLKGHIYRGLKPVHWSPSSRTALAEAELEYPDGHISPSVYAAFPAVELPAALRDALQK 241

Query: 333 ---FLP----DLG----LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPAN 381
               LP    +LG    +A+WTTTPWT+PAN AV+VN +L YA+ +             N
Sbjct: 242 EGIVLPSEAEELGNAFHVAIWTTTPWTLPANLAVSVNERLDYALAD-------------N 288

Query: 382 KKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQC 441
              R            ++VA+DL+ +L    G  L  K T+ GS L    Y HP+ +R  
Sbjct: 289 GNGR-----------LLLVAADLIESLSKTLGLPLTQKATVKGSLLAGLIYRHPLLDRTS 337

Query: 442 PVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLD 501
           PVVIGG+YITTESGTGLVHTAPGHG +D+ T  K+GLP+L PVD+ G  T+EAG F+GL+
Sbjct: 338 PVVIGGEYITTESGTGLVHTAPGHGVDDFHTGQKHGLPVLCPVDEAGTLTDEAGAFAGLN 397

Query: 502 VLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMD 561
           VL D N A+++ L++  +L+  EPY H+YPYDWRTKKPTIFRATEQWFASV+GFR  A++
Sbjct: 398 VLKDANPAIIEALEKADALLKHEPYGHRYPYDWRTKKPTIFRATEQWFASVDGFRDQALN 457

Query: 562 AIGQVKWVP 570
           AI +V W P
Sbjct: 458 AIDKVNWTP 466



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 93/203 (45%), Positives = 138/203 (67%), Gaps = 11/203 (5%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 647 KQDPPYGADVLRLWVSSVDYSADVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFDPSRD 706

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I   +LP++D++ L +   ++ +I  ++ESY+F++ FQ++Q + + DLSNFY D+AKDR
Sbjct: 707 AIPVSELPLLDRWMLQRSAEVMDDINAAFESYEFYRFFQLLQNYCVSDLSNFYLDIAKDR 766

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY        RRSCQTV++  +  +  +IAP+L H+AED+WQN+P+        A   VF
Sbjct: 767 LYVSAPGDRRRRSCQTVMALIIERLAGMIAPVLCHMAEDIWQNIPYPV------AHTSVF 820

Query: 751 ESKWPVLDEKWR----TFPVGEI 769
           ++ WP +   WR    T PV ++
Sbjct: 821 QNGWPSVPADWRDPALTSPVQQL 843


>gi|223993195|ref|XP_002286281.1| isoleucine-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220977596|gb|EED95922.1| isoleucine-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 1083

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 279/483 (57%), Positives = 344/483 (71%), Gaps = 42/483 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRV---ADKNDGENFVLHDGPPYAN 162
           Y  T+ LP+T F  RANA++REPE+ + W    ++ ++   A  N  E F+LHDGPPYAN
Sbjct: 80  YADTIILPQTDFNQRANAIIREPELQQYWSSTNLYSKLSKAAAANSAERFILHDGPPYAN 139

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G+LH+GHALNK+LKD INR+++L+  +V YVPGWDCHGLPIELKVLQ++    ++ LTP 
Sbjct: 140 GDLHIGHALNKLLKDFINRHQILKGKQVHYVPGWDCHGLPIELKVLQTMKSKEREALTPV 199

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
            LR KAA FAK TV+ Q ASF+RYGV  D+ NPYLTL PEYEAAQI VFG+M   G+I+R
Sbjct: 200 TLREKAASFAKETVEKQSASFQRYGVIGDFGNPYLTLLPEYEAAQIRVFGEMYKAGHIFR 259

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD---LGL 339
           G+KPVHWSPSS+TALAEAELEYPEGHVS+SIY    +VS  PS    L E++ +   L +
Sbjct: 260 GRKPVHWSPSSKTALAEAELEYPEGHVSKSIYVALDVVS--PSEE--LKEYMEEGEKLKV 315

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEI-QSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           A+WTTTPWT+PAN AVA+N  L+Y VV+  +S+L+G S                     +
Sbjct: 316 AIWTTTPWTIPANLAVAINPDLEYCVVDTHESVLDGKSK--------------------L 355

Query: 399 IVASDLVPTLEAKW----GTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
           +VA+ LV TLE+K+    G  L +  T  GS L    Y HP+  R  PVV GGDYITTES
Sbjct: 356 LVATGLVKTLESKFQLPEGEHLKVVATFPGSTLVGTTYQHPLYERTSPVVAGGDYITTES 415

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-------FSGLDVLGDGN 507
           GTGLVHTAPGHGQEDY+T LKYGL +LSPVDD GKFT EAG        F GL VLG+GN
Sbjct: 416 GTGLVHTAPGHGQEDYLTGLKYGLELLSPVDDVGKFTVEAGSSTVVGDAFVGLSVLGEGN 475

Query: 508 VAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVK 567
           +AV++ L++  +LI  E Y HKYPYDWRTKKPTIFRAT QWFASVEGFR+ A+ A+  VK
Sbjct: 476 LAVIEALEQAGALIRAENYGHKYPYDWRTKKPTIFRATAQWFASVEGFREDALKAVDTVK 535

Query: 568 WVP 570
           W+P
Sbjct: 536 WIP 538



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/205 (47%), Positives = 129/205 (62%), Gaps = 9/205 (4%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P YGADVLRLWV+SVDY GDV +G  +++Q  + YRKLR T RYL+GNL D+    +SI 
Sbjct: 729 PAYGADVLRLWVASVDYAGDVRVGANIIKQTFESYRKLRNTARYLIGNLADFNPATDSIP 788

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
           Y+DLP +D++ L  L +++  + ++   YQF +  Q + RF   DLSNFY DVAKDRLY 
Sbjct: 789 YEDLPSMDKWMLGTLSSVLNEVDDAMSQYQFSRATQELLRFSTSDLSNFYLDVAKDRLYI 848

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQTVL + L    + IAPILPH+AED+WQNLP  Y  E  S+   VFE  
Sbjct: 849 SAVNDARRRSCQTVLHSLLEGFAKSIAPILPHMAEDIWQNLP--YKKESDSS---VFEGG 903

Query: 754 WPVLDEKWRTFPVGEIYFWGKILEV 778
            P   EK  ++P  +   W  + +V
Sbjct: 904 IP---EKLTSYPAFDSDKWDLVRDV 925


>gi|384253740|gb|EIE27214.1| isoleucyl-tRNA synthetase [Coccomyxa subellipsoidea C-169]
          Length = 1000

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 268/467 (57%), Positives = 329/467 (70%), Gaps = 25/467 (5%)

Query: 104 GRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANG 163
           G YK TV+LP T F MRAN+  REPE+ K W+ + ++ ++   N GE F LHDGPPYANG
Sbjct: 17  GPYKDTVNLPITKFNMRANSTQREPELQKFWEKNGIYEQLLKSNPGEVFTLHDGPPYANG 76

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           + H+GHALNKILK II  Y+LL   K RYVPGWDCHGLPIELKVLQS+ ++ +++L P K
Sbjct: 77  DTHLGHALNKILKSIIVNYQLLGGKKARYVPGWDCHGLPIELKVLQSMSDEQRRELDPIK 136

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
           LR KA  FA  TVKAQ   FKRYG+W DW+ PYLTL+P+YEAAQ+ VFG++   G+IYRG
Sbjct: 137 LRRKARDFALKTVKAQREQFKRYGIWGDWDAPYLTLEPKYEAAQLRVFGKLVAAGHIYRG 196

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           +KPVHWSPSS TALAEAELEYPEGH SRSIY    + S   +    L E L    +A+WT
Sbjct: 197 RKPVHWSPSSATALAEAELEYPEGHTSRSIYVAMPLTSLGDAMPEDLKEKLSGAAVAIWT 256

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TT WT+PAN AVAVN ++ Y            + + A+++              ++VA +
Sbjct: 257 TTGWTIPANEAVAVNERMNYG-----------AESWAHRR--------------LVVAEE 291

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           LV +L AK+G +L    +L G  L  C+Y HP+  R  PV+IGGDYITTESGTGLVHTAP
Sbjct: 292 LVDSLGAKFGVQLQRLGSLTGGQLAGCQYRHPLFERTSPVLIGGDYITTESGTGLVHTAP 351

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHGQEDY   LK GLPI SPVDD+G FTEEAG F GL VL +G  AV++ L ++  L+ E
Sbjct: 352 GHGQEDYQVGLKNGLPISSPVDDDGVFTEEAGPFKGLPVLKEGTAAVIEALQQKGCLLKE 411

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E Y HKYPYDWRTK PTIFRAT+QWF SVEGF+ AAMDA+  V+W+P
Sbjct: 412 ERYAHKYPYDWRTKLPTIFRATDQWFVSVEGFQAAAMDAVRSVQWIP 458



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 93/205 (45%), Positives = 138/205 (67%), Gaps = 7/205 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P  GADVLRLWV+SVDYTGD+++GP V+ Q++D+YRKLR TLR++LGNLHD+    +++ 
Sbjct: 642 PALGADVLRLWVASVDYTGDMVMGPSVMSQVADVYRKLRFTLRFILGNLHDFAPASDAVP 701

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
           YD LP  D++ L     ++  +  SYE+YQFF+++Q +QRF++ DLSN+Y DV KDRLY 
Sbjct: 702 YDALPATDRFILSSFATLLSGLSASYETYQFFRVYQAVQRFVVADLSNWYLDVIKDRLYV 761

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
               SF RR+ QTVL + L  ++  +API+PHLAED WQ LP+       + +  VF++ 
Sbjct: 762 SADDSFDRRAAQTVLHSLLQGLLPALAPIVPHLAEDAWQALPWE------APSVSVFQAG 815

Query: 754 WPVLDEKWRTFPVGEIYFWGKILEV 778
           W    ++W   P  +   +  +L++
Sbjct: 816 WLAPPQQWAAIPADQQRAFKALLQI 840


>gi|87125070|ref|ZP_01080917.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86167390|gb|EAQ68650.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 969

 Score =  550 bits (1418), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 265/476 (55%), Positives = 337/476 (70%), Gaps = 35/476 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK +++L +T FGMRANA  REPE+   W +  V L++  +N G  F LHDGPPYANG L
Sbjct: 15  YKDSLNLLQTGFGMRANARQREPELQAFWSERGVDLKLGVENPGPVFTLHDGPPYANGAL 74

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNK+LKDIIN+++L+Q  +VR+VPGWDCHGLPIELKVLQ++D++ ++ LTP KLR
Sbjct: 75  HMGHALNKVLKDIINKHRLMQGRRVRFVPGWDCHGLPIELKVLQAMDQEQRQALTPLKLR 134

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KAA +A+  V+ QMA FKR+G+WADW +PYLTL  +YEAAQIEVFG M+L+G+IYRG K
Sbjct: 135 KKAAAYARKQVEGQMAGFKRWGIWADWEHPYLTLQKDYEAAQIEVFGTMALKGHIYRGLK 194

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF---LPDLG---- 338
           PVHWSPSSRTALAEAELEYP+GH S S+Y  F  + APP+    L +    LP  G    
Sbjct: 195 PVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPTLEAPPALRTALQQQGVELPADGDALQ 254

Query: 339 ----LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQK 394
               +A+WTTTPWT+PAN AV+VN +L Y + +                        D +
Sbjct: 255 DALQVAIWTTTPWTLPANLAVSVNDRLDYCLAD------------------------DGR 290

Query: 395 KVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
              +IVA+DL  TL  K G  L  K  + G+ L    Y HP+  R+ PV++GG+YITTES
Sbjct: 291 GSLLIVAADLRDTLAGKLGRPLAAKAVVKGALLAGLVYRHPLLERESPVLVGGEYITTES 350

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           GTGLVHTAPGHG +D+ T  K+GLP+L PVD+ G  TEEAG F+GL+VL D N A++  L
Sbjct: 351 GTGLVHTAPGHGVDDFNTGRKHGLPVLCPVDEAGTLTEEAGPFAGLNVLKDANPAIIDAL 410

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +   +L+++E Y H+YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V+W+P
Sbjct: 411 ETAGALLLQESYSHRYPYDWRTKKPTIFRATEQWFASVEGFRSEALAAIDAVEWLP 466



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 94/192 (48%), Positives = 133/192 (69%), Gaps = 7/192 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+  G +
Sbjct: 647 KQEPPYGADVLRLWVSSVDYSADVPIGAGILRQLADVYRKVRNTARYLLGNLHDFDPGRD 706

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            +  + LP++D++ L +   ++  I E++E Y+FF+ FQ++Q + + DLSNFY D+AKDR
Sbjct: 707 GVPMEALPLLDRWMLQRTAVVLDEISEAFERYEFFRFFQLLQNYCVADLSNFYLDIAKDR 766

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY        RRSCQTV++  +  +   IAP+L H+AED+WQNLP+A       A + VF
Sbjct: 767 LYVSAPNDRRRRSCQTVMALIIERLAGAIAPVLCHMAEDIWQNLPYAV------AEDSVF 820

Query: 751 ESKWPVLDEKWR 762
              WPV+ + WR
Sbjct: 821 RRGWPVVPDSWR 832


>gi|260434590|ref|ZP_05788560.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260412464|gb|EEX05760.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 974

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 268/490 (54%), Positives = 335/490 (68%), Gaps = 35/490 (7%)

Query: 92  AKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN 151
           +K+  +   +E   YKHT++L +T FGMRANA+ REPE+   W DH +   +   N G  
Sbjct: 2   SKETRDAAAEERPSYKHTLNLLQTGFGMRANAVQREPELQGFWKDHGIDGELGLNNSGPT 61

Query: 152 FVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL 211
           F LHDGPPYANG LHMGHALNK+LKDIIN+Y++L+  +V YVPGWDCHGLPIELKVLQS+
Sbjct: 62  FTLHDGPPYANGALHMGHALNKVLKDIINKYQVLRGRRVHYVPGWDCHGLPIELKVLQSM 121

Query: 212 DEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVF 271
           D++ +K LTP KLR KAA +A+  V  QM  F+R+G+WADW  PYLTL   YE+AQI VF
Sbjct: 122 DQEQRKALTPIKLRKKAAAYARKQVDGQMKGFQRWGIWADWEQPYLTLQKGYESAQIRVF 181

Query: 272 GQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPS------ 325
           G+M L+G+IYRG KPVHWSPSSRTALAEAELEYP+GH S S+YA F  V  P +      
Sbjct: 182 GEMVLKGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYAAFPAVELPAALRDAFK 241

Query: 326 TSGL-----LNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPA 380
             GL     ++     L +A+WTTTPWT+PAN AV+VN +L YA+ +             
Sbjct: 242 AEGLDLPTEMDALGKALQVAIWTTTPWTLPANLAVSVNERLDYALAD------------- 288

Query: 381 NKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQ 440
                      D     ++VA+DL+ TL       L  + T+ G+ L    Y HP+ +R 
Sbjct: 289 -----------DGAGRLLLVAADLIETLSGTLARPLSRRVTVKGALLAGLTYRHPLLDRS 337

Query: 441 CPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGL 500
            PVVIGGDYITTESGTGLVHTAPGHG +D+ T  K GLP+L PVD+ G  TEEAG F+GL
Sbjct: 338 SPVVIGGDYITTESGTGLVHTAPGHGVDDFHTGQKNGLPVLCPVDEAGNLTEEAGPFAGL 397

Query: 501 DVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAM 560
           +VL D N  +++ L+   +L+ +E Y H+YPYDWRTKKPTIFRATEQWFASVEGFRQ A+
Sbjct: 398 NVLKDANPKIIEALESAGALLKQEAYGHRYPYDWRTKKPTIFRATEQWFASVEGFRQQAL 457

Query: 561 DAIGQVKWVP 570
           DAI  V+W P
Sbjct: 458 DAIAAVEWTP 467



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/203 (48%), Positives = 142/203 (69%), Gaps = 11/203 (5%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 648 KQEPPYGADVLRLWVSSVDYSADVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFNPATD 707

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I   +LP++D++ L +   ++ +I E++ES++FF+ FQ++Q F + DLSNFY D+AKDR
Sbjct: 708 AIPIAELPLLDRWMLQRTAEVMDDITEAFESFEFFRFFQLLQNFCVTDLSNFYLDIAKDR 767

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY        RRSCQTV++  +  +  +IAP+L H+AED+WQNLP  YT+++ S    VF
Sbjct: 768 LYVSAPADQRRRSCQTVMALIIERLAGLIAPVLCHMAEDIWQNLP--YTVKETS----VF 821

Query: 751 ESKWPVLDEKWR----TFPVGEI 769
              WP +  +WR    + PV E+
Sbjct: 822 HRSWPKVPTEWRDAALSAPVQEL 844


>gi|33864825|ref|NP_896384.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|81575298|sp|Q7U9G9.1|SYI_SYNPX RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|33632348|emb|CAE06804.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 974

 Score =  549 bits (1415), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 269/481 (55%), Positives = 338/481 (70%), Gaps = 37/481 (7%)

Query: 103 EGR--YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           EGR  YK T++L +T FGMRANA+ REPE+   W D+ +  ++  +NDG  F LHDGPPY
Sbjct: 11  EGRPSYKDTLNLLQTGFGMRANAVKREPELQAFWSDNGIDGQLGLQNDGPTFTLHDGPPY 70

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG LHMGHALNK+LKD+IN+Y++L+  +VRYVPGWDCHGLPIELKVLQS+D++ +K LT
Sbjct: 71  ANGALHMGHALNKVLKDVINKYQVLKGRRVRYVPGWDCHGLPIELKVLQSMDQEQRKALT 130

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
           P KLR KAA +A+  V  QM  F+R+G+WADW  PYLTL  EYEAAQI+VFG+M L+G+I
Sbjct: 131 PIKLRKKAAAYARKQVDGQMKGFQRWGIWADWEQPYLTLQKEYEAAQIKVFGEMVLKGHI 190

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAP-PSTSGLLNEFLP---- 335
           YRG KPVHWSPSSRTALAEAELEYP+GH S S+Y  F  +  P P    L  E L     
Sbjct: 191 YRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPAMEVPTPLRDALKAEGLELPTE 250

Query: 336 ------DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNV 389
                  L +A+WTTTPWT+PAN AV+VN +L YA+V+                      
Sbjct: 251 TDALRQALQVAIWTTTPWTLPANLAVSVNERLDYALVD---------------------- 288

Query: 390 LKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDY 449
             D     ++VA+DL+ +L       L  + T+ G+ L    Y HP+ +R  PVVIGG+Y
Sbjct: 289 --DGSGRMLVVAADLIESLSTTLERPLKHRATVKGALLAGLIYRHPLLDRTSPVVIGGEY 346

Query: 450 ITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVA 509
           ITTESGTGLVHTAPGHG +D+ T  K+GLP+L PVD+ G  T EAG F+GL+VL D N  
Sbjct: 347 ITTESGTGLVHTAPGHGVDDFHTGQKHGLPVLCPVDEAGTLTAEAGPFAGLNVLKDANPG 406

Query: 510 VVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
           +++ L++  +L+ +E Y H+YPYDWRTKKPTIFRATEQWFASVEGFRQ A+DAI QV+W 
Sbjct: 407 IIEALEQAGALLKQEAYSHRYPYDWRTKKPTIFRATEQWFASVEGFRQDALDAIDQVQWT 466

Query: 570 P 570
           P
Sbjct: 467 P 467



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 97/193 (50%), Positives = 136/193 (70%), Gaps = 7/193 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 648 KQEPPYGADVLRLWVSSVDYSADVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFNPASD 707

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I+  DLP++D++ L +   ++  I E++ESY+FF+ FQ++Q F + DLSNFY D+AKDR
Sbjct: 708 AIAVADLPLLDRWMLQRTAEVMHEITEAFESYEFFRFFQLLQNFCVTDLSNFYLDIAKDR 767

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY    T   RRSCQTV++  +  +   IAP+L H+AED+WQNLP  Y +++ S    VF
Sbjct: 768 LYVSAPTDQRRRSCQTVMALIIERLAGFIAPVLCHMAEDIWQNLP--YPVQETS----VF 821

Query: 751 ESKWPVLDEKWRT 763
           +  WP +   WR 
Sbjct: 822 QRGWPTIPSDWRN 834


>gi|352095072|ref|ZP_08956175.1| Isoleucyl-tRNA synthetase [Synechococcus sp. WH 8016]
 gi|351679083|gb|EHA62225.1| Isoleucyl-tRNA synthetase [Synechococcus sp. WH 8016]
          Length = 968

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 266/476 (55%), Positives = 332/476 (69%), Gaps = 35/476 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK T++L +T FGMRANA+ REPE+   W D  + L +   N G  F LHDGPPYANG L
Sbjct: 15  YKDTLNLLETGFGMRANAIHREPELQAFWKDKGIDLELGRNNPGPMFTLHDGPPYANGAL 74

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNK+LKDIIN+++L+Q  KVR+VPGWDCHGLPIELKVLQ++ ++ ++ LTP KLR
Sbjct: 75  HMGHALNKVLKDIINKHRLMQGRKVRFVPGWDCHGLPIELKVLQAMSQEQRQALTPIKLR 134

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KAA +A   V  QMA FKR+G+WADW NPYLTL  +YEAAQI+VFG M+L+G+IYRG K
Sbjct: 135 KKAAAYAHKQVAGQMAGFKRWGIWADWENPYLTLQKDYEAAQIDVFGTMALKGHIYRGLK 194

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDL-------- 337
           PVHWSPSSRTALAEAELEYP+GH S S+Y  F +V  P      LNE   DL        
Sbjct: 195 PVHWSPSSRTALAEAELEYPDGHTSPSVYVGFPVVDLPEGLRSKLNEQGLDLPAQSNALS 254

Query: 338 -GL--AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQK 394
            GL  A+WTTTPWT+PAN AV+VN +L Y + +                        D K
Sbjct: 255 EGLQVAIWTTTPWTLPANLAVSVNERLDYCLAD------------------------DGK 290

Query: 395 KVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
             F+IVA++L   + +K    L  K T+ G+DL    Y HP+  R+  +V+GG+YITTES
Sbjct: 291 GRFLIVAAELCDAIASKLERPLQAKATVKGADLAGITYSHPLLERRSAIVVGGEYITTES 350

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           GTGLVHTAPGHG +D+ T  K+GLP+L PVD+ G  T EAG+F GL+VL D N  ++  L
Sbjct: 351 GTGLVHTAPGHGVDDFNTGRKHGLPVLCPVDEAGTLTAEAGRFEGLNVLKDANAVIITAL 410

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++  SL+++E Y H+YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V+W+P
Sbjct: 411 EDCGSLLLQEDYSHRYPYDWRTKKPTIFRATEQWFASVEGFRTEALTAIDGVQWLP 466



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/192 (50%), Positives = 135/192 (70%), Gaps = 7/192 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ+SD+YRK+R T RYLLGNLHD+    +
Sbjct: 647 KQEPAYGADVLRLWVSSVDYSADVPIGAGILRQLSDVYRKVRNTSRYLLGNLHDFVPSRD 706

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I+  +LP++D++ L +   ++  I E++E Y+FF+ FQ++Q F + DLSNFY D+AKDR
Sbjct: 707 AIAIRELPLLDRWMLQRTATVLDQISEAFERYEFFRFFQLLQNFCVADLSNFYLDIAKDR 766

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY    T   RRSCQTV++  +  +   IAP+L H+AED+WQN+P+       +  E VF
Sbjct: 767 LYVSAPTDKRRRSCQTVMALIIERLAAAIAPVLCHMAEDIWQNIPYP------TETESVF 820

Query: 751 ESKWPVLDEKWR 762
            S WP + E+WR
Sbjct: 821 LSGWPTVPEEWR 832


>gi|148238671|ref|YP_001224058.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|147847210|emb|CAK22761.1| Isoleucyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 968

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 268/490 (54%), Positives = 339/490 (69%), Gaps = 43/490 (8%)

Query: 97  EGEKKEEGR--YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVL 154
           E     EGR  YK T++L +T FGMRANA+ REPE+   W D+ +  ++   N G  F L
Sbjct: 4   ETRDAAEGRPSYKDTLNLLQTGFGMRANAVKREPELQAFWRDNGIDGQLGLNNSGPTFTL 63

Query: 155 HDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDED 214
           HDGPPYANG LHMGHALNK+LKD+IN+Y++LQ  +VRYVPGWDCHGLPIELKVLQS+D++
Sbjct: 64  HDGPPYANGALHMGHALNKVLKDVINKYQVLQGRRVRYVPGWDCHGLPIELKVLQSMDQE 123

Query: 215 AKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQM 274
            ++ LTP KLR KAA +A+  V  QM  F+R+G+WADW+ PYLTL  EYEAAQI+VFG+M
Sbjct: 124 QRQALTPIKLRKKAAAYARKQVDGQMKGFQRWGIWADWDQPYLTLQKEYEAAQIKVFGEM 183

Query: 275 SLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAP----------- 323
            L+G+IYRG KPVHWSPSSRTALAEAELEYP+GH S S+Y  F  V  P           
Sbjct: 184 VLKGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPAVEVPVPLRETLQSHG 243

Query: 324 ---PSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPA 380
              P+ +  L + L    +A+WTTTPWT+PAN AV+VN +L YA+V+             
Sbjct: 244 VELPADAAALGQALQ---VAIWTTTPWTLPANLAVSVNERLDYALVD------------- 287

Query: 381 NKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQ 440
                      D     ++VA++L+ +L       L  + T+ G+ L    Y HP+ +R 
Sbjct: 288 -----------DGNGRLLVVAAELIESLSKTLERPLQQRATVKGALLAGLVYRHPLLDRT 336

Query: 441 CPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGL 500
            PVVIGGDYITTESGTGLVHTAPGHG +D+ T  K+GLP+L PVD+ G  T EAG F+GL
Sbjct: 337 SPVVIGGDYITTESGTGLVHTAPGHGVDDFHTGQKHGLPVLCPVDEAGTLTAEAGPFAGL 396

Query: 501 DVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAM 560
           +VL D N  +++ L++  +L+ +E Y H+YPYDWRTKKPTIFRATEQWFASVEGFRQ A+
Sbjct: 397 NVLKDANPGIIEALEQAGALLKQEAYSHRYPYDWRTKKPTIFRATEQWFASVEGFRQDAL 456

Query: 561 DAIGQVKWVP 570
           DAI QV+W P
Sbjct: 457 DAIDQVQWTP 466



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 98/198 (49%), Positives = 140/198 (70%), Gaps = 7/198 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 647 KQEPAYGADVLRLWVSSVDYSTDVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFNPATD 706

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I+ +DLP++D++ L +   ++  I E++ESY+FF+ FQ++Q F + DLSNFY D+AKDR
Sbjct: 707 AIAVEDLPLLDRWMLQRTAEVMDEITEAFESYEFFRFFQLLQNFCVTDLSNFYLDIAKDR 766

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY        RRSCQTV++  +  +  +IAP+L H+AED+WQNLP  Y +E+ S    VF
Sbjct: 767 LYVSAPADRRRRSCQTVMALIIERLAGLIAPVLCHMAEDIWQNLP--YPVEETS----VF 820

Query: 751 ESKWPVLDEKWRTFPVGE 768
           +  WP   ++WR   + E
Sbjct: 821 QRGWPTAPDRWRDASLNE 838


>gi|317968656|ref|ZP_07970046.1| isoleucyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 984

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 272/491 (55%), Positives = 339/491 (69%), Gaps = 26/491 (5%)

Query: 90  MAAKKAAEGEKKE-EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKND 148
           M A  A+E      +  YK T++L KT F MRAN+ VREPEI   W + +++ R++++N 
Sbjct: 1   MTASTASESSANAGQISYKDTLNLLKTPFNMRANSQVREPEIQTFWAEQRLYERLSEENT 60

Query: 149 GENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL 208
           G  F LHDGPPYANG LH+GHALNKILKDIIN+  LLQ  + R+VPGWDCHGLPIELKVL
Sbjct: 61  GPCFTLHDGPPYANGALHVGHALNKILKDIINKTALLQGKRARFVPGWDCHGLPIELKVL 120

Query: 209 QSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQI 268
           Q L    + +LTP  LR KA  +A   V+ Q A F+R+G+WADW+ PYLTL  +YEAAQI
Sbjct: 121 QGLKSSERAELTPVSLRKKAHAYALEQVEGQKAGFRRWGIWADWDQPYLTLQKDYEAAQI 180

Query: 269 EVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSG 328
            VFG M L G+IYRG KPVHWSPSSRTALAEAELEYP+GH S S++A F  V  P   + 
Sbjct: 181 GVFGAMVLAGHIYRGLKPVHWSPSSRTALAEAELEYPDGHSSPSVFAAFPAVELPSELAD 240

Query: 329 LLNE--FLP-------DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAP 379
            L +    P        L +A+WTTTPWT+PAN AV+VN +L YA+  I++  +GD+ AP
Sbjct: 241 TLEQAGLSPAQATAEGGLAVAIWTTTPWTLPANLAVSVNERLDYAICAIEA--QGDTPAP 298

Query: 380 ANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNR 439
           A                 ++VA++L  +LE   G  L    ++ GS LE  +Y HP+  R
Sbjct: 299 AAS--------------HLVVAAELRESLETSLGLSLKPLVSVKGSALEGLQYRHPLLER 344

Query: 440 QCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSG 499
             PVVIGGDYITTE+GTGLVHTAPGHG +D+ T  KY LP+L PVD+ G  T EAG F+G
Sbjct: 345 TSPVVIGGDYITTEAGTGLVHTAPGHGVDDFNTGRKYKLPVLCPVDEAGNLTAEAGPFAG 404

Query: 500 LDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAA 559
            +VL D N  ++  L+E   L+ +E YEH+YPYDWRTKKPTIFRATEQWFASVEGFRQAA
Sbjct: 405 TNVLKDANPTIISALEETGLLLKQERYEHRYPYDWRTKKPTIFRATEQWFASVEGFRQAA 464

Query: 560 MDAIGQVKWVP 570
           +DAI QV+W+P
Sbjct: 465 LDAIAQVEWLP 475



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 95/193 (49%), Positives = 137/193 (70%), Gaps = 7/193 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           ++ P YGADVLRLWVSSVDY+ DV +GP +++Q++D+YRK+R T RYLLGNLHD+    +
Sbjct: 663 KQEPPYGADVLRLWVSSVDYSADVPLGPGIVKQLADVYRKVRNTARYLLGNLHDFDPSKD 722

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I Y++LP++DQ+ L +  +++ ++   +E Y+F++ FQ +Q F +VDLSN Y D+AKDR
Sbjct: 723 AIPYEELPLLDQWMLQRTASLIDSVSGDFERYEFYRFFQALQNFCVVDLSNVYLDIAKDR 782

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY  G   F RRSCQTVL+  +  +  +IAP+L H+AED+WQNLP++       A   VF
Sbjct: 783 LYVSGANDFRRRSCQTVLALVVERLAGLIAPVLCHMAEDIWQNLPYSV------AETSVF 836

Query: 751 ESKWPVLDEKWRT 763
           E  WP   E+WR 
Sbjct: 837 ERGWPTAPEQWRN 849


>gi|254423822|ref|ZP_05037540.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196191311|gb|EDX86275.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 963

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 266/465 (57%), Positives = 325/465 (69%), Gaps = 27/465 (5%)

Query: 112 LPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHAL 171
           LP+T F MRANA+ REPE+   W + +++  +A KN GE F+LHDGPPYANG+LHMGHAL
Sbjct: 2   LPQTNFSMRANAVKREPELQAYWQEKKIYETLAQKNPGEPFILHDGPPYANGDLHMGHAL 61

Query: 172 NKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKF 231
           NKILKDI+N+Y++LQ  KVRYVPGWDCHGLPIELKVLQ +    +++LTP KLR KA +F
Sbjct: 62  NKILKDIVNKYQILQGRKVRYVPGWDCHGLPIELKVLQKMKSSERRELTPIKLRQKAKEF 121

Query: 232 AKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSP 291
           A  TV+ Q   F+RYGVW DW++PY+TL PEYEAAQ+ VFG+M   GYIYRG + VHWSP
Sbjct: 122 ALKTVEKQSEGFQRYGVWGDWDHPYMTLLPEYEAAQLGVFGKMVENGYIYRGLRSVHWSP 181

Query: 292 SSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPA 351
           SS+TALAEAELEYPE H+S SIY  F +V+A  S    L  +L  LG+AVWTTTPWT+PA
Sbjct: 182 SSQTALAEAELEYPEDHISPSIYLAFPVVTASESAQSALAPYLDSLGVAVWTTTPWTIPA 241

Query: 352 NAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK 411
           N AVAVNA L YAVV                KS  G   +     ++IVA DL   L   
Sbjct: 242 NVAVAVNADLTYAVV----------------KSESGEPFE-----YLIVAKDLAEKLSDL 280

Query: 412 WGTKLVIKKTLAGSDLENCRYVHPVDNRQC------PVVIGGDYITTESGTGLVHTAPGH 465
           +GT L I   + G  L    Y HP+  ++       P+VIGGDYITTESGTGLVHTAPGH
Sbjct: 281 FGTGLQIVGEIKGESLAGSTYRHPLATKEAAFDRISPIVIGGDYITTESGTGLVHTAPGH 340

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           GQED+    +  LPIL PVD+ G FT EAG   GL+VL   N  +++ L E+  L+  EP
Sbjct: 341 GQEDFAVGQREELPILCPVDERGNFTAEAGSLEGLNVLKTANDVLIEVLTEEKVLLKHEP 400

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Y HKYPYDWRTKKP I+RATEQWFASV+GF   A++AI +V+W+P
Sbjct: 401 YNHKYPYDWRTKKPVIYRATEQWFASVKGFVGDAINAINEVEWIP 445



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 102/192 (53%), Positives = 140/192 (72%), Gaps = 7/192 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           ++ P YGADVLRLWVSSVDY+GD+ +G + ++QMSD+YRK+R T R+LLGNLHD+    +
Sbjct: 626 KQEPPYGADVLRLWVSSVDYSGDMRLGMRNVKQMSDVYRKIRNTARFLLGNLHDFDPSRD 685

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I+Y+ LP +DQY L ++  +  +++ ++ESYQFF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 686 AIAYEQLPDLDQYMLHRMTEVFADVKTAFESYQFFQFFQTVQNFCVVDLSNFYLDIAKDR 745

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RRSCQTVLS  + S+ + IAP+L H+AED+WQ LP+    E GS  E VF
Sbjct: 746 LYISSANSARRRSCQTVLSVAIESLAKAIAPVLSHMAEDIWQALPY----EAGS--ESVF 799

Query: 751 ESKWPVLDEKWR 762
           ES W  + E W+
Sbjct: 800 ESGWVQMKEDWQ 811


>gi|78211836|ref|YP_380615.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|78196295|gb|ABB34060.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 974

 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 266/490 (54%), Positives = 333/490 (67%), Gaps = 35/490 (7%)

Query: 92  AKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN 151
           +K+  +   +E   YKHT++L +T FGMRANA+ REPE+   W D  +  ++   N G  
Sbjct: 2   SKETRDAAAEERPSYKHTLNLLQTGFGMRANAVQREPELQAFWKDQGIDGKLGLNNSGPT 61

Query: 152 FVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL 211
           F LHDGPPYANG LHMGHALNK+LKD+IN+Y++L   +VRYVPGWDCHGLPIELKVLQS+
Sbjct: 62  FTLHDGPPYANGALHMGHALNKVLKDVINKYQVLNGRQVRYVPGWDCHGLPIELKVLQSI 121

Query: 212 DEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVF 271
           D++ +K LTP KLR KAA +A+  V  QM  F+R+G+WADW  PYLTL  EYE+AQI VF
Sbjct: 122 DQEQRKALTPIKLRKKAAAYARKQVDGQMKGFQRWGIWADWEQPYLTLQKEYESAQIRVF 181

Query: 272 GQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLN 331
           G+M L+G+IYRG KPVHWSPSSRTALAEAELEYP+GH S S+YA F  V  P +    L 
Sbjct: 182 GEMVLKGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYAAFPAVELPEALRDSLK 241

Query: 332 EFLPD-----------LGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPA 380
               D           L +A+WTTTPWT+PAN AV+VN +L YA+ +             
Sbjct: 242 AEGLDLPTETDALGKALQVAIWTTTPWTLPANLAVSVNERLDYALAD------------- 288

Query: 381 NKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQ 440
                      D     ++VA+DL+  L       L  + T+ G+ L    Y HP+ +R 
Sbjct: 289 -----------DGAGRLLLVAADLIEALSGTLERPLSRRATVKGALLAGLTYRHPLLDRT 337

Query: 441 CPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGL 500
            PVVIGGDYITTESGTGLVHTAPGHG +D+ T  K GLP+L PVD+ G  T+EAG F+GL
Sbjct: 338 SPVVIGGDYITTESGTGLVHTAPGHGVDDFHTGQKNGLPVLCPVDEAGNLTDEAGPFAGL 397

Query: 501 DVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAM 560
           +VL D N  +++ L+   +L+ +E Y H+YPYDWRTKKPTIFRATEQWFASVEGFRQ A+
Sbjct: 398 NVLQDANAKIIEALESAGALLKQEAYGHRYPYDWRTKKPTIFRATEQWFASVEGFRQQAL 457

Query: 561 DAIGQVKWVP 570
           DAI  V+W P
Sbjct: 458 DAIAAVEWTP 467



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 98/203 (48%), Positives = 140/203 (68%), Gaps = 11/203 (5%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 648 KQEPPYGADVLRLWVSSVDYSADVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFNPATD 707

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I   +LP++D++ L +   ++  I E++ES++FF+ FQ++Q F + DLSNFY D+AKDR
Sbjct: 708 AIPTAELPLLDRWMLQRTAEVMDEITEAFESFEFFRFFQLLQNFCVTDLSNFYLDIAKDR 767

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY        RRSCQTV++  +  +  +IAP+L H+AED+WQNLP  Y +E+ S    VF
Sbjct: 768 LYVSAPQDQRRRSCQTVMALIIERLAGLIAPVLCHMAEDIWQNLP--YPVEETS----VF 821

Query: 751 ESKWPVLDEKWR----TFPVGEI 769
              WP +  +WR    + PV E+
Sbjct: 822 HRGWPQIPAEWRDATLSAPVQEL 844


>gi|78185627|ref|YP_378061.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|78169921|gb|ABB27018.1| Isoleucyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 973

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 261/489 (53%), Positives = 338/489 (69%), Gaps = 35/489 (7%)

Query: 93  KKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF 152
            K   G  +E   YK+T++L +T+FGMRANA+ REPE+   W +H +  ++   N G  F
Sbjct: 2   NKETRGAAEERPSYKNTLNLLQTSFGMRANAVTREPELQSFWAEHGIDFKLGVTNKGPTF 61

Query: 153 VLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD 212
            LHDGPPYANG LHMGHALNK+LKDI+N++++L+  +VR+VPGWDCHGLPIELKVLQS+D
Sbjct: 62  TLHDGPPYANGALHMGHALNKVLKDIVNKHQILKGRRVRFVPGWDCHGLPIELKVLQSMD 121

Query: 213 EDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFG 272
           ++ ++ LTP KLR KAA +A+  V+ QM  F+R+G+WADW+ PYL+L  +YEAAQI VFG
Sbjct: 122 QEQRQALTPIKLRKKAAAYARKQVEGQMKGFQRWGIWADWDQPYLSLQKDYEAAQIRVFG 181

Query: 273 QMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPP------ST 326
            M L+G+IYRG KPVHWSPSSRTALAEAELEYP+GH S S+YA F  V  P        T
Sbjct: 182 DMVLKGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYATFPAVELPAVLRDALQT 241

Query: 327 SGLL-----NEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPAN 381
            G++      E    L +A+WTTTPWT+PAN AV+VN +L YA+ +              
Sbjct: 242 DGIVLPSQAEELGKTLHVAIWTTTPWTLPANLAVSVNERLDYALAD-------------- 287

Query: 382 KKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQC 441
                     D     ++VA++L+ +L       L  K T+ G+ L    Y HP+ +R  
Sbjct: 288 ----------DGSGRLLLVAAELIESLSGTLALPLKRKATVKGALLAGLIYRHPLLDRTS 337

Query: 442 PVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLD 501
           P+VIGG+YITTESGTGLVHTAPGHG +D+ T  K GLP+L PVD+ G  TEEAG F+GL+
Sbjct: 338 PIVIGGEYITTESGTGLVHTAPGHGVDDFHTGQKNGLPVLCPVDEAGTLTEEAGPFAGLN 397

Query: 502 VLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMD 561
           VL D N A+++ L +  +L+  EPY H+YPYDWRTKKPTIFRATEQWFAS++GFR  A+D
Sbjct: 398 VLKDANPAIIEALQQADALLKHEPYGHRYPYDWRTKKPTIFRATEQWFASIDGFRDDALD 457

Query: 562 AIGQVKWVP 570
           AI +V W P
Sbjct: 458 AIDKVNWTP 466



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 92/203 (45%), Positives = 137/203 (67%), Gaps = 11/203 (5%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 647 KQDPPYGADVLRLWVSSVDYSADVPIGAGILRQLADVYRKVRNTSRYLLGNLHDFNPSRD 706

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            I   +LP++D++ L +   ++ +I  ++E+++F++ FQ++Q + + DLSNFY D+AKDR
Sbjct: 707 GIPVHELPLLDRWMLQRSAEVMDDINAAFENFEFYRFFQLLQNYCVSDLSNFYLDIAKDR 766

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY        RRSCQTV++  +  +  +IAP+L H+AED+WQNLP+        A   VF
Sbjct: 767 LYVSAPDDRRRRSCQTVMALIIERLAGLIAPVLCHMAEDIWQNLPYPV------AHTSVF 820

Query: 751 ESKWPVLDEKWR----TFPVGEI 769
           ++ WP +   WR    T PV ++
Sbjct: 821 QNGWPSVPADWRDPALTAPVQQL 843


>gi|397638857|gb|EJK73254.1| hypothetical protein THAOC_05131 [Thalassiosira oceanica]
          Length = 1055

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 281/500 (56%), Positives = 349/500 (69%), Gaps = 38/500 (7%)

Query: 85  SRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRV- 143
           SR   + AK    G KK +  Y  T+ LP+T F  RANA+ REPE+ + W    ++ ++ 
Sbjct: 45  SRSTSLCAKG---GGKKPKNAYADTILLPQTDFSQRANAIKREPELQEYWKSIDLYSKLS 101

Query: 144 --ADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGL 201
             A+    E FVLHDGPPYANG+LH+GHALNK+LKD INR+++L+  +V YVPGWDCHGL
Sbjct: 102 SDAESRSAERFVLHDGPPYANGDLHIGHALNKLLKDFINRHQILKGKQVHYVPGWDCHGL 161

Query: 202 PIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDP 261
           PIELKVLQ++    ++ LTP  LR +AA FAK TV+ Q ASF+RYGV  D++NPYLTL P
Sbjct: 162 PIELKVLQTMKSKERQGLTPIALRERAATFAKETVEKQSASFQRYGVIGDFDNPYLTLLP 221

Query: 262 EYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVS 321
           EYEAAQI VFG+M  QG+I+RG+KPVHWSPSSRTALAEAELEYPEGHVS+SIY    +VS
Sbjct: 222 EYEAAQIRVFGEMYKQGFIFRGRKPVHWSPSSRTALAEAELEYPEGHVSKSIYVALDVVS 281

Query: 322 APPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPAN 381
             PS     +    +L +A+WTTTPWT+PAN AVA+N +L+Y VV+         A P  
Sbjct: 282 --PSEELQQHVGSGNLKVAIWTTTPWTIPANLAVAINPELEYCVVD---------AHP-- 328

Query: 382 KKSRPGNVLKDQKKVFIIVASDLVPTLEAKW----GTKLVIKKTLAGSDLENCRYVHPVD 437
                 NVL  Q K  ++VA  LV +LE K+    G  L +  +  GS L    Y HP+ 
Sbjct: 329 ------NVLDGQSK--LLVAKGLVESLETKFDLSDGDNLKVIASFNGSSLVGTSYQHPLY 380

Query: 438 NRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKF 497
            RQ PV+ GGDYITTESGTGLVHTAPGHGQEDY+T LK GL +LSPVDD G+FT EAG  
Sbjct: 381 ERQSPVIAGGDYITTESGTGLVHTAPGHGQEDYLTGLKNGLELLSPVDDVGRFTVEAGSS 440

Query: 498 S-------GLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFA 550
           +       G  VLG+GN+AV++ L+E  +L+  E Y HKYPYDWRTKKPTIFRAT+QWFA
Sbjct: 441 TIVGDDLVGKSVLGEGNIAVIEALEEAGALLKAEDYGHKYPYDWRTKKPTIFRATDQWFA 500

Query: 551 SVEGFRQAAMDAIGQVKWVP 570
           SVEGFR  A+ A+  V+W+P
Sbjct: 501 SVEGFRDDALKAVDSVQWIP 520



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 93/183 (50%), Positives = 118/183 (64%), Gaps = 5/183 (2%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 633
           P YGADVLRLWVSSVDY GDV +G  +++Q  + YRKLR T RYL+GNL D+    ++I 
Sbjct: 711 PAYGADVLRLWVSSVDYAGDVRVGSNIIKQTFESYRKLRNTARYLIGNLDDYNPSTDAIP 770

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
           YDDLP +D++ L  L  ++  + ++Y +YQF +    I RF   DLSNFY DVAKDRLY 
Sbjct: 771 YDDLPSMDKWMLGTLTKVLNEVDDAYSNYQFSRATNEILRFATADLSNFYLDVAKDRLYI 830

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                F RRSCQTVL   L    +  APILPH+AED+WQNLP+    ++ S    VFE  
Sbjct: 831 SAIDDFRRRSCQTVLHKLLEGFAKSFAPILPHMAEDIWQNLPYKAEGDNSS----VFEGG 886

Query: 754 WPV 756
            P 
Sbjct: 887 VPA 889


>gi|124024122|ref|YP_001018429.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|123964408|gb|ABM79164.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 1370

 Score =  544 bits (1401), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 271/507 (53%), Positives = 345/507 (68%), Gaps = 39/507 (7%)

Query: 79  SSSKRRSRGPVMAAKKAAEGEKKEEG----RYKHTVDLPKTTFGMRANALVREPEIHKLW 134
           + SK+ S   +     A   EK  +G     YK T++L +T+FGMRANA  REPE+ + W
Sbjct: 386 TESKQPSIDNLSCCSDAVTQEKHPDGVARTSYKDTLNLLQTSFGMRANASQREPELQEFW 445

Query: 135 DDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVP 194
               + L++   N G+NF LHDGPPYANG LHMGHALNK+LKDIIN++++L+  +VR+VP
Sbjct: 446 KQQGIDLQLGLNNQGQNFTLHDGPPYANGALHMGHALNKVLKDIINKHQILRGRQVRFVP 505

Query: 195 GWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNN 254
           GWDCHGLPIELKVLQ+L+++ ++ LTP KLR KAA FA+  V +QMA F+R+GVWADW +
Sbjct: 506 GWDCHGLPIELKVLQNLNQEQREALTPLKLRKKAAAFARKQVDSQMAGFRRWGVWADWEH 565

Query: 255 PYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIY 314
           PYLTL  EYEAAQI+VFG M  +GYIYRG KPVHWSPSSRTALAEAELEYP+GH S S+Y
Sbjct: 566 PYLTLQKEYEAAQIQVFGTMFQKGYIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVY 625

Query: 315 AVFRMVSAPPS-TSGLLNEF--LPDLGL--------AVWTTTPWTVPANAAVAVNAKLQY 363
           A F     P S  + L N+   LP  GL        A+WTTTPWT+PAN AV+VN KL Y
Sbjct: 626 AAFPAAKLPESLRTSLSNQGLELPKNGLELGQALQIAIWTTTPWTLPANLAVSVNEKLDY 685

Query: 364 AVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLA 423
           +                           D +   ++VA++L+P+L      +L  + T+ 
Sbjct: 686 SFA------------------------VDNQGRLLLVAAELLPSLRDTLALELTARATVK 721

Query: 424 GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSP 483
           G+ L    Y HP+ +R  P+VIGG+YITTESGTGLVHTAPGHG +D+ T  K  L +L P
Sbjct: 722 GALLAGLIYKHPLLDRDSPIVIGGEYITTESGTGLVHTAPGHGVDDFNTGKKNDLGMLCP 781

Query: 484 VDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFR 543
           VD+ G  T EAG F+GL+VL D N  ++  L+E+ +L+  EPY H+YPYDWRTKKPTIFR
Sbjct: 782 VDESGTMTSEAGPFAGLNVLKDANPTIIAALEERGALLKHEPYAHRYPYDWRTKKPTIFR 841

Query: 544 ATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ATEQWFASVEGFR  A+ AI  V+W+P
Sbjct: 842 ATEQWFASVEGFRNEALTAINSVEWLP 868



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 90/192 (46%), Positives = 134/192 (69%), Gaps = 7/192 (3%)

Query: 572  QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
            ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 1049 KQEPPYGADVLRLWVSSVDYSADVPIGTSILRQIADVYRKVRNTSRYLLGNLHDFDPERD 1108

Query: 631  SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            +I+  +LP++D++ L +   ++  I  +++ Y+F++ FQ++Q + +VDLSNFY D+AKDR
Sbjct: 1109 AIAVPELPLLDRWMLQRTAEVMDEISTAFDRYEFYRFFQLLQSYCVVDLSNFYLDIAKDR 1168

Query: 691  LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
            LY    +   RRSCQTV++  +  +   I+P+L H+AED+WQNLP++       A + VF
Sbjct: 1169 LYVSSPSERRRRSCQTVMALIIERLAGAISPVLCHMAEDIWQNLPYSV------AEDSVF 1222

Query: 751  ESKWPVLDEKWR 762
               WP + E WR
Sbjct: 1223 RRGWPTVPETWR 1234


>gi|87301916|ref|ZP_01084750.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87283484|gb|EAQ75439.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 997

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 269/477 (56%), Positives = 330/477 (69%), Gaps = 28/477 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK T++L +T F MRANA  REPE+ K W +  ++ R++  N GE F LHDGPPYANG L
Sbjct: 8   YKDTLNLLQTPFSMRANAKTREPELQKFWAELDLYQRLSRGNPGEVFTLHDGPPYANGPL 67

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDI+N+Y LL+  + R+VPGWDCHGLPIELKVLQSL    +  LTP  LR
Sbjct: 68  HVGHALNKILKDILNKYALLRGRRARFVPGWDCHGLPIELKVLQSLSSAERSALTPIDLR 127

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            +A  +A   V+ Q A F+R+G+WADW  PYLTL+  YEAAQI VFG+M L G+IYRG K
Sbjct: 128 RRAHAYALEQVEGQKAGFRRWGIWADWEQPYLTLNKAYEAAQIGVFGRMVLAGHIYRGLK 187

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF---------LP- 335
           PVHWSPSSRTALAEAELEYP+GH S S+Y  F +V+ P S    L             P 
Sbjct: 188 PVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPVVALPGSLGARLTALGLTHAETATTPD 247

Query: 336 --DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQ 393
             DL +A+WTTTPWT+PAN AV+VNA L+YA+  +     GD  A   + SR        
Sbjct: 248 PGDLAVAIWTTTPWTLPANLAVSVNASLEYALCRV-----GDHGANGYRTSR-------- 294

Query: 394 KKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTE 453
               +IVA+ LV +L +    +L    +L GS+LE   Y HP+ +R  PVVIGGDYITTE
Sbjct: 295 ---HLIVAASLVESLRSSLQLELEPLLSLRGSELEGVEYRHPLFDRTSPVVIGGDYITTE 351

Query: 454 SGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKY 513
           +GTGLVHTAPGHG +D+ T  K GLP+L PVD+ G  T EAG F+GL+VL D N A++  
Sbjct: 352 AGTGLVHTAPGHGVDDFNTGRKAGLPVLCPVDEGGTLTTEAGPFAGLNVLKDANPAIISA 411

Query: 514 LDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+   +L+  EPYEH+YPYDWRTKKPTIFRATEQWFASVEGFR  A+DAI  V W+P
Sbjct: 412 LETAGALLRHEPYEHRYPYDWRTKKPTIFRATEQWFASVEGFRAQALDAIAAVDWLP 468



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 91/196 (46%), Positives = 133/196 (67%), Gaps = 12/196 (6%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW----- 626
           ++ P YGADVLRLWVSSVDY+ DV +GP +++Q++D+ RK+R T RYLLGNLHD+     
Sbjct: 664 KQQPAYGADVLRLWVSSVDYSADVPLGPGIVKQLADVTRKVRNTARYLLGNLHDFDPRPA 723

Query: 627 -RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFD 685
              G++++  DLP++D++ L +  ++++ +   +E Y+F++ FQ +Q F +VDLSN Y D
Sbjct: 724 AEGGDAVAIADLPLLDRWMLERTASLIEAVSADFERYEFYRFFQALQNFCVVDLSNVYLD 783

Query: 686 VAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSA 745
           +AKDRLY  G + F RRSCQTVL+  +  +  +IAP+L H+AED+WQNLP+        A
Sbjct: 784 IAKDRLYVSGASDFRRRSCQTVLALVVERLAGLIAPVLCHMAEDIWQNLPYPV------A 837

Query: 746 AEFVFESKWPVLDEKW 761
              VFE  WP     W
Sbjct: 838 ERSVFERGWPTAAASW 853


>gi|318042707|ref|ZP_07974663.1| isoleucyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 977

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 266/474 (56%), Positives = 329/474 (69%), Gaps = 25/474 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK T++L +T F MRANA VREPEI   W + Q++ R++ +N GE+F LHDGPPYANG L
Sbjct: 11  YKDTLNLLQTPFSMRANAKVREPEIQAFWAELQLYERLSQQNPGESFTLHDGPPYANGAL 70

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+  LLQ  + R++PGWDCHGLPIELKVLQ L    + +LTP  LR
Sbjct: 71  HVGHALNKILKDIINKTALLQGKRARFIPGWDCHGLPIELKVLQGLKSSERAELTPVSLR 130

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  +A   V+ Q A F+R+G+WADW+ PYLTL   YEAAQI VFG M L G+IYRG K
Sbjct: 131 QKAHAYALEQVEGQKAGFRRWGIWADWDQPYLTLQKSYEAAQIGVFGAMVLAGHIYRGLK 190

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE---------FLPD 336
           PVHWSPSSRTALAEAELEYP+GH S S+YA F  V  P + +  LN              
Sbjct: 191 PVHWSPSSRTALAEAELEYPDGHTSPSVYAAFPAVELPAALAEQLNAAGLSADAATATGG 250

Query: 337 LGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKV 396
           L +A+WTTTPWT+PAN AV+VN +L YA+  +    +GD+AAPA                
Sbjct: 251 LAVAIWTTTPWTLPANLAVSVNERLDYAICAVAP--QGDNAAPAVS-------------- 294

Query: 397 FIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGT 456
            ++VA++L  +LE   G  L    ++ G+ LE   Y HP+  R   VVIGGDYITTE+GT
Sbjct: 295 HLVVAAELRESLETSLGLALTPLLSVKGAALEGIVYRHPLLERTSQVVIGGDYITTEAGT 354

Query: 457 GLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDE 516
           GLVHTAPGHG +D+ T  KYGLP+L PVD+ G  T EAG F+G +VL D N  +++ L+ 
Sbjct: 355 GLVHTAPGHGVDDFNTGKKYGLPVLCPVDEAGNLTAEAGPFAGTNVLKDANPTILEALEG 414

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              L+ +E YEH+YPYDWRTKKPTIFRATEQWFASVEGFR AA++AI QV W+P
Sbjct: 415 TGLLLKQERYEHRYPYDWRTKKPTIFRATEQWFASVEGFRAAALEAIAQVDWLP 468



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 143/213 (67%), Gaps = 9/213 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV +GP +++Q++D+YRK+R T RYLLGNLHD+    +
Sbjct: 656 KQEPAYGADVLRLWVSSVDYSADVPLGPGIVKQLADVYRKVRNTARYLLGNLHDFNPATD 715

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++ Y +LP++DQ+ L +   ++ ++   +E ++F++ FQ +Q F +VDLSN Y D+AKDR
Sbjct: 716 AVPYAELPLLDQWMLQRTAALIDSVSGDFERFEFYRFFQALQNFCVVDLSNVYLDIAKDR 775

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY  G   F RRSCQTVL+  +  +  +IAP+L H+AED+WQNLP++       A   VF
Sbjct: 776 LYVSGAADFRRRSCQTVLALVVERLAGLIAPVLCHMAEDIWQNLPYSV------AERSVF 829

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVT 783
           E  WP    +WR   +      G+ILE+  +V 
Sbjct: 830 ERGWPTAPAEWRRSELEAPM--GRILELRALVN 860


>gi|88807987|ref|ZP_01123498.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88788026|gb|EAR19182.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 968

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 266/489 (54%), Positives = 337/489 (68%), Gaps = 39/489 (7%)

Query: 93  KKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF 152
           + AAEG       YK T++L +T FGMRANA+ REPE+   W+++ +  ++  KN G  F
Sbjct: 6   RDAAEGRPS----YKDTLNLLQTGFGMRANAVKREPELQAFWNENGIDGQLGLKNSGPPF 61

Query: 153 VLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD 212
            LHDGPPYANG LHMGHALNK+LKD+IN+Y++LQ  +VRYVPGWDCHGLPIELKVLQS+D
Sbjct: 62  TLHDGPPYANGALHMGHALNKVLKDVINKYQVLQGRRVRYVPGWDCHGLPIELKVLQSMD 121

Query: 213 EDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFG 272
            + ++ LTP KLR KAA +A+  V  QM  F+R+G+WADW  PYLTL  EYEAAQI+VFG
Sbjct: 122 PEQRQALTPIKLRKKAAAYARKQVDGQMKGFQRWGIWADWEQPYLTLQKEYEAAQIKVFG 181

Query: 273 QMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLL-- 330
           +M L+G+IYRG KPVHWSPSSRTALAEAELEYP+GH S S+Y  F +   P +    L  
Sbjct: 182 EMVLKGHIYRGLKPVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPVEELPKALRDTLKG 241

Query: 331 ------NEFLP---DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPAN 381
                  E  P    L +A+WTTTPWT+PAN AV+VN +L YA+V+              
Sbjct: 242 DGIDLPTEAAPLGDALQVAIWTTTPWTLPANLAVSVNERLDYALVD-------------- 287

Query: 382 KKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQC 441
                     D +   ++VA+DL+ +L       L  + T+ G+ L    Y HP+ +R  
Sbjct: 288 ----------DGEGRMLVVAADLIESLSKTLERPLKRRATVKGAQLAGLTYRHPLLDRTS 337

Query: 442 PVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLD 501
            VVIGG+YITTESGTGLVHTAPGHG +D+ T  KYGLP+L PVD+ G  T EAG F GL+
Sbjct: 338 AVVIGGEYITTESGTGLVHTAPGHGVDDFHTGQKYGLPVLCPVDEAGTLTAEAGPFKGLN 397

Query: 502 VLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMD 561
           VL D N  +++ L++  +L+ +E Y H+YPYDWRTKKPTIFRATEQWFASVEGFRQ A++
Sbjct: 398 VLKDANPVIIEALEQAGALLKQEAYGHRYPYDWRTKKPTIFRATEQWFASVEGFRQQALE 457

Query: 562 AIGQVKWVP 570
           AI  V+W P
Sbjct: 458 AIDHVQWTP 466



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 98/198 (49%), Positives = 139/198 (70%), Gaps = 7/198 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           ++ P +GADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 647 KQEPPFGADVLRLWVSSVDYSADVPIGAGILRQIADVYRKVRNTSRYLLGNLHDFSPERD 706

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I+  DLP++D++ L +   ++  I ES+E+Y+FF+ FQ++Q F + DLSNFY D+AKDR
Sbjct: 707 AIAVADLPLLDRWMLQRTAEVMDEITESFENYEFFRFFQLLQNFCVTDLSNFYLDIAKDR 766

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY    +   RRSCQTV++  +  +  +IAP+L H+AED+WQNLP  Y +E+ S    VF
Sbjct: 767 LYVSAPSDQRRRSCQTVMALIIERLAGLIAPVLCHMAEDIWQNLP--YPVEETS----VF 820

Query: 751 ESKWPVLDEKWRTFPVGE 768
           +  WP   + WR   V E
Sbjct: 821 QRGWPTAPDSWRDASVQE 838


>gi|33239720|ref|NP_874662.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|81665019|sp|Q7VDV0.1|SYI_PROMA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|33237245|gb|AAP99314.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 969

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 265/496 (53%), Positives = 334/496 (67%), Gaps = 45/496 (9%)

Query: 90  MAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG 149
           M  +K  +G  +    YK +++L KT+F MRANA+VREPE+ + W +  +   +   N G
Sbjct: 1   MNHEKTNDGNNRPS--YKESLNLLKTSFSMRANAIVREPELQQFWKEKGIDFELGLANKG 58

Query: 150 ENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQ 209
             F LHDGPPYANGNLHMGHALNKILKDIIN+Y++L+  KVR+VPGWDCHGLPIEL+VL+
Sbjct: 59  STFTLHDGPPYANGNLHMGHALNKILKDIINKYQILKGSKVRFVPGWDCHGLPIELQVLK 118

Query: 210 SLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIE 269
           +LD   ++DLTP KLR KAA +A   +  Q   F+R+G+WADW+NPYLTL  EYEAAQI+
Sbjct: 119 TLDRKEREDLTPIKLRKKAAAYAHKQIALQKDGFRRWGIWADWDNPYLTLQKEYEAAQIK 178

Query: 270 VFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL 329
           +FG+M+ +GYIYRG KPVHWSPSSRTALAEAELEYPEGH S SIY  F +V  P     L
Sbjct: 179 LFGEMAFKGYIYRGLKPVHWSPSSRTALAEAELEYPEGHTSPSIYVAFSVVKLP----NL 234

Query: 330 LNEFLPDLGL---------------AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEG 374
           L E L   GL               A+WTTTPWT+PAN AVAVN  + Y +         
Sbjct: 235 LQESLSKQGLALPVHEDGLSNKLKVAIWTTTPWTLPANMAVAVNENIDYIIA-------- 286

Query: 375 DSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVH 434
                           KD  +  +I+ASDL   +  + G+ L     + G  L+   Y H
Sbjct: 287 ----------------KDNSEKLLIIASDLREIVSEEIGSPLEKVAIVKGKMLDGVLYKH 330

Query: 435 PVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA 494
           P+ +   P V+GG+YITTESGTG+VHTAPGHG +D+ T +KY LPI+ PVD++G FT EA
Sbjct: 331 PLFDSLNPFVLGGNYITTESGTGIVHTAPGHGVDDFNTGMKYKLPIICPVDEKGFFTSEA 390

Query: 495 GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG 554
           G F GL+VL D N  ++  L E   L+ E+PY HKYPYDWRTKKPTIFRATEQWFASVEG
Sbjct: 391 GDFEGLNVLKDANTKIINALKESGCLLKEKPYIHKYPYDWRTKKPTIFRATEQWFASVEG 450

Query: 555 FRQAAMDAIGQVKWVP 570
           FR  A+++I +V+W+P
Sbjct: 451 FRNDALNSIEKVEWLP 466



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 95/189 (50%), Positives = 127/189 (67%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P YGADVLRLWVSSVDY+ DV IG  +L Q+SD+YRK+R T RYLLGNLHD+    + + 
Sbjct: 650 PAYGADVLRLWVSSVDYSVDVPIGNNILSQLSDVYRKVRNTARYLLGNLHDFDPAKDGLD 709

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
             DLP++D++ L +  ++V  I  ++E Y+F K FQ++Q F +VDLSNFY D+AKDRLY 
Sbjct: 710 IGDLPILDRWMLNRTADVVDEISIAFERYEFSKFFQLLQSFCVVDLSNFYLDIAKDRLYV 769

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                F RRSCQ VLS  +  +  VI+P+L H AED+WQN+P+          E VF+  
Sbjct: 770 SAPNDFRRRSCQYVLSLIVERLAGVISPVLSHTAEDIWQNIPYKLN------EESVFQRY 823

Query: 754 WPVLDEKWR 762
           WP + + WR
Sbjct: 824 WPKVPDSWR 832


>gi|412990009|emb|CCO20651.1| isoleucyl-tRNA synthetase [Bathycoccus prasinos]
          Length = 1057

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 281/563 (49%), Positives = 371/563 (65%), Gaps = 66/563 (11%)

Query: 98  GEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG----ENFV 153
           G+KKE   Y  TV LP+TTF MRAN++ +EP + K W ++ V+ +VA++++     E+F 
Sbjct: 54  GKKKESNAYAATVLLPQTTFEMRANSVQKEPLMQKWWLENNVYKQVANRDESKENQESFT 113

Query: 154 LHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL-D 212
           LHDGPPYANG+LH+GHALNKILKD I RY+ L+  +VRYVPGWD HGLPIELKVLQS+ D
Sbjct: 114 LHDGPPYANGDLHIGHALNKILKDFITRYQALRGKRVRYVPGWDTHGLPIELKVLQSIED 173

Query: 213 EDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFG 272
            + +K+LTP KLR KAAKFA   V+ Q   F+RYG+W ++ NPY+TL P YEA+Q+EVFG
Sbjct: 174 PEVRKNLTPIKLRKKAAKFALGQVERQSKQFQRYGIWGEFENPYMTLQPAYEASQLEVFG 233

Query: 273 QMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE 332
           +M L G+IYRGKKPVHWSPSS+TALAEAELEYP+ HVS+S+Y  F + +     + + +E
Sbjct: 234 KMFLNGHIYRGKKPVHWSPSSQTALAEAELEYPDVHVSQSVYVAFPIEATLEGANAIKDE 293

Query: 333 FLP------DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRP 386
            L        L LAVWTTTPWT+PANAAVA+N KL+Y V +                   
Sbjct: 294 TLKSTLLDGSLKLAVWTTTPWTMPANAAVAMNPKLEYRVCD------------------- 334

Query: 387 GNVLKDQKKVFIIVASDLVPTLEAKWGTKLVI--KKTLAGSDLENCRYVHP-VDNRQCPV 443
               K +K   I+VA+DLV +L       L    +    G+++E   Y HP + +R  PV
Sbjct: 335 ---FKGEK---IVVANDLVASLSETLEDTLTALGESPFLGAEMEGLTYQHPTIKDRVNPV 388

Query: 444 VIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDV 502
           ++GGDYITT++GTGLVHTAPGHGQ+DY+  LKY LP+ SPVDD G FTEEAG +  GL+V
Sbjct: 389 IVGGDYITTDAGTGLVHTAPGHGQDDYIAGLKYNLPLHSPVDDLGNFTEEAGSELFGLNV 448

Query: 503 LGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDA 562
           LGDGN   ++ L    +L+  EPYEHKYPYDWRTKKPTIFRATEQWF SVEGFR  A+ A
Sbjct: 449 LGDGNEKCIEQLQAANALLKREPYEHKYPYDWRTKKPTIFRATEQWFCSVEGFRDDALKA 508

Query: 563 IGQVKWVPPQEAPGYGADVLRLWVSS--------------------VDYTGDVMIGPQVL 602
           +  VK++P       G+  +R  VS                      + T +V++   ++
Sbjct: 509 LDSVKFIPES-----GSKRMRPMVSGRSDWCISRQRSWGVPIPCFFFEETNEVLMDESII 563

Query: 603 RQMSDIYRKLRGTLRYLLGNLHD 625
           + ++DI RK  GT  + + ++ +
Sbjct: 564 KHVTDIVRK-EGTDAWFMKDIEE 585



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/187 (43%), Positives = 114/187 (60%), Gaps = 13/187 (6%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 633
           PGYGAD LRLWV+S DY  DV IG  V++Q S+ YRK+RGTLR+L+G  +D++   ++I+
Sbjct: 699 PGYGADTLRLWVASTDYNSDVSIGSNVIKQTSENYRKIRGTLRFLMGVENDFKSKEHAIA 758

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
           +D LP  DQY L++LE  +K I  +Y++Y F  +   I  F    LSN Y DV+KDRLY 
Sbjct: 759 FDQLPGFDQYCLYRLEETMKKIEIAYDNYNFAAVNSEINAFTTF-LSNVYLDVSKDRLYL 817

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE----FV 749
           G  +   RR+ QTV+   + +++  +APILPH AE+       A+   D  A E     V
Sbjct: 818 GHPSDAKRRAAQTVVHELITNLLAALAPILPHTAEE-------AFLARDTVAKEDKQISV 870

Query: 750 FESKWPV 756
           F   WP 
Sbjct: 871 FLQGWPT 877


>gi|33864084|ref|NP_895644.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|81573102|sp|Q7TUN3.1|SYI_PROMM RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|33635668|emb|CAE21992.1| t-RNA synthetase, class Ia:Isoleucyl-tRNA synthetase
           [Prochlorococcus marinus str. MIT 9313]
          Length = 968

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 260/476 (54%), Positives = 333/476 (69%), Gaps = 35/476 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK T++L +T+FGMRANA  REPE+ + W    + L +   N G+NF LHDGPPYANG L
Sbjct: 15  YKDTLNLLQTSFGMRANASQREPELQEFWKQQGIDLELGLNNQGQNFTLHDGPPYANGAL 74

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNK+LKDIIN++++L+  +VR+VPGWDCHGLPIELKVLQ+L+++ ++ LTP KLR
Sbjct: 75  HMGHALNKVLKDIINKHQILRGRQVRFVPGWDCHGLPIELKVLQNLNQEQREALTPLKLR 134

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KAA FA+  V +QMA F+R+G+WADW +PYLTL  EYEAAQI+VFG+M  +GYIYRG K
Sbjct: 135 KKAAAFARKQVDSQMAGFRRWGIWADWEHPYLTLQKEYEAAQIQVFGKMFQKGYIYRGLK 194

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPP---STSGLLNEFLPDLGL--- 339
           PVHWSPSSRTALAEAELEYP+GH S S+Y  F     P    ++ G     LP+ GL   
Sbjct: 195 PVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPAAKLPEKLRTSLGNQGLELPNNGLELG 254

Query: 340 -----AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQK 394
                A+WTTTPWT+PAN AV+VN KL Y+                           D +
Sbjct: 255 QALQIAIWTTTPWTLPANLAVSVNEKLDYSFA------------------------VDNQ 290

Query: 395 KVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
              ++VA++L+P+L      +L  + T+ G+ L    Y HP+ +R  P+VIGG+YITTES
Sbjct: 291 GRLLLVAAELLPSLRDTLALELTARATVKGALLAGLIYKHPLLDRDSPIVIGGEYITTES 350

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           GTGLVHTAPGHG +D+ T  K+ L +L PVD+ G  T EAG F+GL+VL D N  ++  L
Sbjct: 351 GTGLVHTAPGHGVDDFNTGQKHDLGMLCPVDESGTMTSEAGPFAGLNVLKDANPTIIAAL 410

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +E+ +L+  EPY H+YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V+W+P
Sbjct: 411 EERGALLKHEPYAHRYPYDWRTKKPTIFRATEQWFASVEGFRNEALTAINSVEWLP 466



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 89/192 (46%), Positives = 132/192 (68%), Gaps = 7/192 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ++D+YRK+R T RYLLGNLHD+    +
Sbjct: 647 KQEPPYGADVLRLWVSSVDYSADVPIGASILRQIADVYRKVRNTSRYLLGNLHDFDPERD 706

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I   +LP++D++ L +   ++  I  +++ Y+F++ FQ++Q + +VDLSNFY D+AKDR
Sbjct: 707 AIPVPELPLLDRWMLQRTAEVMDEISTAFDRYEFYRFFQLLQSYCVVDLSNFYLDIAKDR 766

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY    +   RRSCQT ++  +  +   I+P+L H+AED+WQNLP++       A + VF
Sbjct: 767 LYVSSPSERRRRSCQTAMALIIERLAGAISPVLCHMAEDIWQNLPYSV------AEDSVF 820

Query: 751 ESKWPVLDEKWR 762
              WP + E WR
Sbjct: 821 RRGWPTVPETWR 832


>gi|219109559|ref|XP_002176534.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411069|gb|EEC50997.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1052

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 286/556 (51%), Positives = 361/556 (64%), Gaps = 49/556 (8%)

Query: 61  LSFLNVTCYSICSGDE-----FCSSSK---RRSRGPVMAAKKAAEGEKKEEGRYKHTVDL 112
           ++  ++   S+C         F ++++   RRS     A      G KK +  Y  T+ L
Sbjct: 8   MTLFSLLASSVCQNHRGTVTAFSNTARTLTRRSTVARSAKDGGGGGAKKPKNAYAPTIVL 67

Query: 113 PKTTFGMRANALVREPEIHKLWDDHQVFLRV---ADKNDGENFVLHDGPPYANGNLHMGH 169
           P+T F  RANA++REPE+  LW +  ++ ++   A +   E FVLHDGPPYANG+LH GH
Sbjct: 68  PETAFSQRANAVIREPELQALWKETNLYHKLSSQAKEAGAERFVLHDGPPYANGDLHCGH 127

Query: 170 ALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAA 229
           ALNKILKD INR ++L   +V Y+PGWDCHGLPIELKVLQ++    ++ LTP  LR KAA
Sbjct: 128 ALNKILKDFINRKQILNGKQVHYIPGWDCHGLPIELKVLQTMKSKEREALTPVTLREKAA 187

Query: 230 KFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHW 289
           +FAK TV+ Q  +F+RYG++ D+  PYLTL PE+EAAQI VFG+M  +GYI+RG+KPVHW
Sbjct: 188 EFAKETVEKQSVAFQRYGIFGDFEKPYLTLQPEFEAAQIRVFGEMFQKGYIFRGRKPVHW 247

Query: 290 SPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTV 349
           SPSSRTALAEAELEYPEGHVS+SIY  F  V  P       +     L +A+WTTTPWT+
Sbjct: 248 SPSSRTALAEAELEYPEGHVSKSIYVAFN-VDTPSEVLASFHSTEEPLKVAIWTTTPWTM 306

Query: 350 PANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLE 409
           PAN AVAVN +L Y+VV+                         +K   ++VA+DL  +L 
Sbjct: 307 PANMAVAVNPELSYSVVQ------------------------HEKTGKLLVATDLASSLA 342

Query: 410 AKW----GTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
            K+       L I  T  G DL    Y HP+ +R+ PV+ GGDYITTESGTGLVHTAPGH
Sbjct: 343 RKFDLPEDETLDILATFPGKDLVGTIYKHPMYDRKSPVLAGGDYITTESGTGLVHTAPGH 402

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           GQEDY+T LK GL ILSPVDD GKFT EAG ++ G+ VL +GN+A++  L E  SL+  E
Sbjct: 403 GQEDYLTGLKNGLEILSPVDDVGKFTIEAGERYVGMRVLAEGNLAMIDALQEAGSLLKAE 462

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRL 584
            Y HKYPYDWRTKKPTIFRAT+QWFASV GFR  A+DA+ +VKWVP       G + +R 
Sbjct: 463 DYGHKYPYDWRTKKPTIFRATDQWFASVAGFRDQALDAVEKVKWVPE-----VGKNRIR- 516

Query: 585 WVSSVDYTGDVMIGPQ 600
             S VD  GD  I  Q
Sbjct: 517 --SFVDGRGDWCISRQ 530



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 90/190 (47%), Positives = 125/190 (65%), Gaps = 11/190 (5%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW----- 626
           ++ P YGADVLRLWV++ DY+GDV+IG  +++Q  D YRKLR T RYL+GNL D+     
Sbjct: 690 KQDPAYGADVLRLWVANSDYSGDVLIGDNIIKQTFDSYRKLRNTARYLIGNLADFVPSDS 749

Query: 627 RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
              N+++YDDLP +D++ L +L  +++ + E+ + +Q+ +  Q + RF   DLSNFY DV
Sbjct: 750 TDSNAVAYDDLPSMDKWMLGRLSAVLRTVNEAMDDFQYQRAIQELLRFASADLSNFYLDV 809

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 746
           AKDRLY        RRSCQTVL A L    + I+PILPH+AED+WQNLP+        + 
Sbjct: 810 AKDRLYISAMDDARRRSCQTVLYACLEGFTKAISPILPHMAEDIWQNLPYQ------KST 863

Query: 747 EFVFESKWPV 756
           + VFE  WP 
Sbjct: 864 DSVFEGGWPT 873


>gi|307104070|gb|EFN52326.1| hypothetical protein CHLNCDRAFT_36907 [Chlorella variabilis]
          Length = 1038

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 268/478 (56%), Positives = 329/478 (68%), Gaps = 25/478 (5%)

Query: 95  AAEGEKK--EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF 152
           A++G KK  EE  Y  TV+LP T F MRAN++VREP++ + W + +++ +++  N G  F
Sbjct: 58  ASKGRKKDAEESVYSKTVNLPATKFDMRANSVVREPQLQQFWQESKIYEQLSRANPGPTF 117

Query: 153 VLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD 212
            LHDGPPYANG+LH+GHALNKILKDIINRY+LLQ  K ++VPGWDCHGLPIELKVLQS+ 
Sbjct: 118 TLHDGPPYANGDLHIGHALNKILKDIINRYQLLQGRKAKFVPGWDCHGLPIELKVLQSMK 177

Query: 213 EDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFG 272
           +  ++ LTP +LR KAA+FA  TV AQ   FKRYGVWADW+ PY+TL+P YEAAQ+ VFG
Sbjct: 178 DAERRSLTPLQLRKKAAEFALKTVDAQREQFKRYGVWADWDAPYVTLEPAYEAAQLRVFG 237

Query: 273 QMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE 332
           QM L G+IYR  K    +    T+  +      +GH S SIY    + +  P+       
Sbjct: 238 QMVLNGHIYRCGKASAATDCMHTSNTQ------KGHTSCSIYVAMPLQAVGPNAPEAAGA 291

Query: 333 FLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKD 392
            L      +WTTTPWT+PAN AVAVNA LQYAVVE+Q                 G++ + 
Sbjct: 292 ALEGAHFGIWTTTPWTIPANLAVAVNADLQYAVVEVQ-----------------GDLPEG 334

Query: 393 QKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITT 452
                +IVA+DL  +L  K+G  L    T+ G++LE C Y HP+ +R  PVV GGDYITT
Sbjct: 335 WTVRRLIVAADLADSLAEKFGIALTTLCTVKGAELEGCSYRHPLFDRTSPVVAGGDYITT 394

Query: 453 ESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVK 512
           ESGTGLVHTAPGHGQEDY    KYGLP+LSPVDD G FT+EAG F+GL V GDGN AVVK
Sbjct: 395 ESGTGLVHTAPGHGQEDYQVGQKYGLPLLSPVDDAGVFTDEAGPFAGLQVQGDGNDAVVK 454

Query: 513 YLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            L     L+MEE Y HKYPYDWRTKKPTIFRAT+QWFASVEGFR AA++AI    W+P
Sbjct: 455 ALAAAGVLLMEERYAHKYPYDWRTKKPTIFRATDQWFASVEGFRSAALEAIQGAHWIP 512



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 99/217 (45%), Positives = 143/217 (65%), Gaps = 7/217 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLWVSSVDY+ DV+IG +++ Q++D+YRK+R TLRYLLGNL D+    +
Sbjct: 693 KKEPPYGADVLRLWVSSVDYSSDVLIGGRIIGQVADVYRKMRFTLRYLLGNLADFEPAAH 752

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++ +  L   D+Y L +   +V     +Y SYQF+K++Q +QRF ++DLSNFY DVAKDR
Sbjct: 753 AVPHAQLAAADRYILARFAALVDECSAAYGSYQFYKVYQALQRFTVLDLSNFYLDVAKDR 812

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +  RR+CQTVL+A L  ++ VIAP+LPH+AED WQNLP+          + VF
Sbjct: 813 LYISAAAAPDRRACQTVLAALLEGMLPVIAPLLPHMAEDAWQNLPYK------RQEQSVF 866

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNE 787
           ++ W  + ++WR  P  +   W  +L +   +  L E
Sbjct: 867 QAGWAAVPDEWRQLPEADAMLWRAVLGIRSEINLLLE 903


>gi|113953240|ref|YP_729567.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123031893|sp|Q0IDA5.1|SYI_SYNS3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|113880591|gb|ABI45549.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 968

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 258/476 (54%), Positives = 330/476 (69%), Gaps = 35/476 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK T++L +T FGMRANA+ REPE+   W +  + L +   N G  F LHDGPPYANG L
Sbjct: 15  YKDTLNLLETGFGMRANAIHREPELQAFWKEKGIDLDLGRNNPGPVFTLHDGPPYANGAL 74

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNK+LKDIIN+++L+Q  KVR+VPGWDCHGLPIELKVLQ+++++ ++ LTP KLR
Sbjct: 75  HMGHALNKVLKDIINKHRLMQGRKVRFVPGWDCHGLPIELKVLQAMNQEQRQALTPIKLR 134

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KAA +A   V  Q A F+R+G+WADW++PYLTL  +YEAAQI+VFG M+L+G+IYRG K
Sbjct: 135 KKAAAYAHKQVAGQRAGFQRWGIWADWDHPYLTLQKDYEAAQIDVFGTMALKGHIYRGLK 194

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD--------- 336
           PVHWSPSSRTALAEAELEYP+GH S S+Y  F +V  P S    LN    D         
Sbjct: 195 PVHWSPSSRTALAEAELEYPDGHTSPSVYVGFPVVDLPESLRSKLNAQGLDVPAASDTLS 254

Query: 337 --LGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQK 394
             L +A+WTTTPWT+PAN AV+VN +L Y + +                        D  
Sbjct: 255 QCLQVAIWTTTPWTLPANLAVSVNDRLDYCLAD------------------------DGN 290

Query: 395 KVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
              +IVA++L  ++ +K    L  K T+ G+DL    Y HP+  R+  +V+GG+YITTES
Sbjct: 291 GQLLIVAAELCDSIASKLERPLQAKATVKGADLAGITYSHPLLERRSAIVVGGEYITTES 350

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           GTGLVHTAPGHG +D+ T  K+GLP+L PVD+ G  T EAG F GL+VL D N  ++  L
Sbjct: 351 GTGLVHTAPGHGVDDFNTGRKHGLPVLCPVDEAGTLTAEAGPFEGLNVLKDANAKIIAAL 410

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++  SL+++E Y H+YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V+W+P
Sbjct: 411 EDSGSLLLQESYSHRYPYDWRTKKPTIFRATEQWFASVEGFRTEALTAIDGVQWLP 466



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 97/192 (50%), Positives = 134/192 (69%), Gaps = 7/192 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           ++ P YGADVLRLWVSSVDY+ DV IG  +LRQ+SD+YRK+R T RYLLGNLHD+    +
Sbjct: 647 KQEPAYGADVLRLWVSSVDYSADVPIGAGILRQLSDVYRKVRNTSRYLLGNLHDFIPSRD 706

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +IS  DLP++D++ L +   ++  I E++E Y+FF+ FQ++Q F + DLSNFY D+AKDR
Sbjct: 707 AISISDLPLLDRWMLQRTATVLDQISEAFERYEFFRFFQLLQNFCVADLSNFYLDIAKDR 766

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY        RRSCQTV++  +  +   IAP+L H+AED+WQN+P+       +  E VF
Sbjct: 767 LYVSAPNDKRRRSCQTVMALIIERLAAAIAPVLCHMAEDIWQNIPYP------TGTESVF 820

Query: 751 ESKWPVLDEKWR 762
            S WP + E+WR
Sbjct: 821 LSGWPSVPEEWR 832


>gi|303290709|ref|XP_003064641.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226453667|gb|EEH50975.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 977

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/464 (57%), Positives = 329/464 (70%), Gaps = 21/464 (4%)

Query: 119 MRANALVREPEIHKLWDDHQVFLRVADKN--DGENFVLHDGPPYANGNLHMGHALNKILK 176
           MRAN++ +EP I   W ++ V+ ++A +   +GE F LHDGPPYANG+LH+GHALNKILK
Sbjct: 1   MRANSVTKEPAIQSWWAENGVYEQIASREGANGETFTLHDGPPYANGDLHIGHALNKILK 60

Query: 177 DIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATV 236
           D + RY+ L+  +VR+VPGWDCHGLPIELKVLQS+D++ + +LTP KLR KA  FA  TV
Sbjct: 61  DFVCRYEALKGKRVRFVPGWDCHGLPIELKVLQSMDKEKRAELTPIKLRKKARNFALKTV 120

Query: 237 KAQMA---SFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSS 293
            AQ     SFKRYGVWADW +PYLTL PEYE AQ+EVFGQM L G++YRGKKPVHWSPSS
Sbjct: 121 DAQREQARSFKRYGVWADWEDPYLTLLPEYEGAQMEVFGQMFLNGHVYRGKKPVHWSPSS 180

Query: 294 RTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTS--GLLNEFLPDLGLAVWTTTPWTVPA 351
            TALAEAELEYPEGHVS S+Y  F + +   + +      E L +  LAVWTTTPWT+PA
Sbjct: 181 MTALAEAELEYPEGHVSTSVYVAFPINADDEAANFPAEHREKLKNASLAVWTTTPWTMPA 240

Query: 352 NAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAK 411
           NAAVAVN KL Y++ E+       +   A K+  P +         +IVA+DLV  + ++
Sbjct: 241 NAAVAVNDKLSYSLCEV-------TGVAATKEDAPSSDAAAMVGKTLIVATDLVSDVASR 293

Query: 412 WGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYV 471
           WG  L     +AG+ LE   Y HP           G+YITTESGTGLVHTAPGHGQEDY+
Sbjct: 294 WGLTLAAVADVAGAQLEGLTYAHPF------YPADGEYITTESGTGLVHTAPGHGQEDYI 347

Query: 472 TSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKY 530
           T LK+GLP++SPVDD GKFTE+AG   +GL VL  GN A V+ L +  +LIM E Y HKY
Sbjct: 348 TGLKHGLPLISPVDDAGKFTEDAGDDLNGLAVLDAGNAACVEKLRDVGALIMTEAYGHKY 407

Query: 531 PYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEA 574
           PYDWRTKKPTIFRATEQWFASVEGFR  A+ A+  ++++P   A
Sbjct: 408 PYDWRTKKPTIFRATEQWFASVEGFRDEALKALDGIEFIPASGA 451



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 93/145 (64%), Gaps = 4/145 (2%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P +GAD LRLWV+S DYT DV+IG  VL+Q SD YRKLRGTLR+L+GN+ D+    +
Sbjct: 627 KQDPAFGADTLRLWVASTDYTSDVLIGMNVLKQTSDAYRKLRGTLRFLMGNIGDFAPEKD 686

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQ--RFIIVDLSNFYFDVAK 688
            + Y+DLP  ++YAL +   +V  +   Y+++ +      +Q        LSN Y DV+K
Sbjct: 687 GVKYEDLPAFERYALRRTAAMVNEMERHYQNFAYSGATATLQARSSFTTFLSNVYLDVSK 746

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLL 713
           DRLY     S  RR+CQTV+ AH++
Sbjct: 747 DRLYIESPNSPERRACQTVV-AHVV 770


>gi|254432512|ref|ZP_05046215.1| isoleucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626965|gb|EDY39524.1| isoleucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 990

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 264/480 (55%), Positives = 323/480 (67%), Gaps = 35/480 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK T++L +T F MRANA  REPEI   W   +++ R++ +N G  F LHDGPPYANG L
Sbjct: 10  YKDTLNLLQTPFSMRANAKAREPEIQAFWAGQRIYERLSRENPGPVFTLHDGPPYANGAL 69

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN+  LLQ  + R+VPGWDCHGLPIELKVLQ L    +  LTP  LR
Sbjct: 70  HVGHALNKILKDIINKTALLQGRRARFVPGWDCHGLPIELKVLQGLKSSERAALTPLGLR 129

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  +A   V+ Q A F+R+G+WADW  PYLTL   YEAAQI VFG M L G+IYRG K
Sbjct: 130 HKAHAYALEQVEGQKAGFQRWGIWADWEQPYLTLQKSYEAAQIGVFGAMVLAGHIYRGLK 189

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD--------- 336
           PVHWSPSSRTALAEAELEYP+GH S S+Y  F + + P   +  L     +         
Sbjct: 190 PVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPVEAVPSVLASRLRAVGIEVEDSGQMGG 249

Query: 337 ------LGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVL 390
                 L +A+WTTTPWT+PAN A++VN KL Y++ E+                  G+ L
Sbjct: 250 HRRPITLSMAIWTTTPWTLPANLAISVNGKLDYSICEVNG----------------GDSL 293

Query: 391 KDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYI 450
            +     ++VA++LV TLE   G  L    +L G +LE   Y HP+  R+  VVIGGDYI
Sbjct: 294 SNH----LVVATELVATLEQTLGLTLKPLLSLKGEELEGSVYRHPLLERRGQVVIGGDYI 349

Query: 451 TTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAV 510
           TTE+GTGLVHTAPGHG +D+ T  KYGLP+L PVD+ G  TEEAG F+G +VL D N  +
Sbjct: 350 TTEAGTGLVHTAPGHGVDDFNTGRKYGLPVLCPVDEAGTLTEEAGPFAGTNVLKDANPTI 409

Query: 511 VKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           V  L E   LI E+ YEH+YPYDWRTKKPTIFRATEQWFASVEGFRQAA++AI +V+W+P
Sbjct: 410 VAALREAGVLISEQRYEHRYPYDWRTKKPTIFRATEQWFASVEGFRQAALEAIARVEWLP 469



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 101/218 (46%), Positives = 140/218 (64%), Gaps = 14/218 (6%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV--- 628
           ++ P YGADVLRLWVSSVDY+ DV +GP +++Q++D+YRK+R T RYLLGNLHD+     
Sbjct: 649 KQEPAYGADVLRLWVSSVDYSADVPLGPGIVKQLADVYRKVRNTARYLLGNLHDFDPRPA 708

Query: 629 ---GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFD 685
              G++I  ++LP++DQ+ L +   +V  +   +  Y+F++ FQ +Q F +VDLSN Y D
Sbjct: 709 AAGGHAIPLEELPLLDQWMLQRTAALVDAVSGDFGRYEFYRFFQALQNFCVVDLSNVYLD 768

Query: 686 VAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSA 745
           +AKDRLY      F RRSCQTVLS  +  +  +IAP+L H+AED+WQNLP+        A
Sbjct: 769 IAKDRLYVSAAGDFRRRSCQTVLSLVVERLAGLIAPVLCHMAEDIWQNLPYPV------A 822

Query: 746 AEFVFESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVT 783
              VFE  WP     WR  P  E    G+ILE+  +V 
Sbjct: 823 EASVFERGWPTAPAAWRQ-PELEPPM-GRILELRALVN 858


>gi|428221446|ref|YP_007105616.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7502]
 gi|427994786|gb|AFY73481.1| Isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7502]
          Length = 946

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 264/521 (50%), Positives = 346/521 (66%), Gaps = 42/521 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV+LP+T F MRANA+ +EPEI + W + +++  +A  N GE F+LHDGPPYANG+L
Sbjct: 14  YKDTVNLPQTNFSMRANAIAKEPEIQRFWAEEKIYEDLAANNSGEKFILHDGPPYANGSL 73

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNKILKDIINRY++L+  KVRYV GWDCHGLPIELKV+Q+L  + +K LTP +LR
Sbjct: 74  HMGHALNKILKDIINRYQILRGRKVRYVLGWDCHGLPIELKVIQNLKPEERKALTPLELR 133

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA  FA + +  Q   FKR+GVW D+ N Y TL PEYEAAQI VFG+M+L GYIYRG K
Sbjct: 134 RKAKDFAYSAIAEQSTGFKRWGVWGDYENAYYTLKPEYEAAQIGVFGKMALNGYIYRGLK 193

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF-LPDLGLAVWTT 344
           PV+WSPSS+TALAEAELEYPE HVS+SIY  F +     +   +L +    +L   +WTT
Sbjct: 194 PVYWSPSSQTALAEAELEYPEDHVSKSIYVAFPVTKISDTFQLVLGDRQFSNLHAVIWTT 253

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++ N  L Y++V     L G+                       I+A+DL
Sbjct: 254 TPWTIPANLGISANPHLNYSIV-----LAGEK--------------------HYIIATDL 288

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V  L A +G +L I+ T  G  LE+    HP+ +R  P+++ GD++T ESGTGLVHTAPG
Sbjct: 289 VDKLSATFGEELSIQLTFKGEVLEHTIAQHPIFDRLSPILL-GDHVTAESGTGLVHTAPG 347

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++D++   +YGL +LSPV+D G FTEEAG+FSGL+VL +GN  V++ L E  +L+  E
Sbjct: 348 HGKDDFIVGNRYGLGVLSPVNDYGIFTEEAGQFSGLNVLKEGNTKVIEVLSELGALVKTE 407

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP----------QEA 574
            Y+HKYPYDWRTKKPTI RATEQWFASV+GFR  A+ AI +V W+P           QE 
Sbjct: 408 DYKHKYPYDWRTKKPTIVRATEQWFASVDGFRDIALGAIKEVNWIPAIGENRITAMVQER 467

Query: 575 PGYGADVLRLWVSSVDY-----TGDVMIGPQVLRQMSDIYR 610
             +     R W   +       T + +  P+ +  + +I+R
Sbjct: 468 SDWCISRQRSWGVPIPVFYDMDTNEPLFTPETIAHIQEIFR 508



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 90/193 (46%), Positives = 129/193 (66%), Gaps = 7/193 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           Q+ P YGADVLRLWV+SVDY+ DV I   +L+Q+SD+  K+R T R+LL NL D+    N
Sbjct: 634 QQEPAYGADVLRLWVASVDYSSDVPISKNILKQISDVSFKIRNTARFLLSNLFDFNPSEN 693

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I++++L   D Y L +L  I + I E+Y ++QF + FQ+IQ F +VDLS+FY D+AKDR
Sbjct: 694 AIAFEELQESDCYLLHRLYEITQEITEAYNNFQFSRFFQLIQNFCVVDLSSFYLDIAKDR 753

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RR+CQTVL+  + +I  +IAP+L HLAED+WQ+LP+  + +       VF
Sbjct: 754 LYISAANSPRRRACQTVLALTVQAIATLIAPVLSHLAEDIWQHLPYPVSTKS------VF 807

Query: 751 ESKWPVLDEKWRT 763
           ++ W    E+W  
Sbjct: 808 QAGWVTSPEQWHN 820


>gi|427703156|ref|YP_007046378.1| isoleucyl-tRNA synthetase [Cyanobium gracile PCC 6307]
 gi|427346324|gb|AFY29037.1| isoleucyl-tRNA synthetase [Cyanobium gracile PCC 6307]
          Length = 983

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 260/475 (54%), Positives = 325/475 (68%), Gaps = 29/475 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK T++L +T F MRANA VREPE+   W +  ++ R++  N G  F LHDGPPYANG L
Sbjct: 8   YKDTLNLLQTPFAMRANARVREPELQAFWKEQDLYGRLSRSNPGAPFTLHDGPPYANGAL 67

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIIN++ LLQ  + R+VPGWDCHGLPIELKVLQ L  + ++ LTP  LR
Sbjct: 68  HVGHALNKILKDIINKHALLQGRRARFVPGWDCHGLPIELKVLQGLGGEERRGLTPIDLR 127

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            +A  +A   V+AQ + F+R+G+WADW+ PYLTL   YEAAQI VFG+M L G+IYRG K
Sbjct: 128 RRAHAYALEQVEAQRSGFRRWGIWADWDEPYLTLQKSYEAAQIGVFGKMVLAGHIYRGLK 187

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE----------FLP 335
           PVHWSPSSRTALAEAELEYP+GH S S+Y  F +V  P   +GLL +             
Sbjct: 188 PVHWSPSSRTALAEAELEYPDGHTSPSVYVAFPVVDLPAPLAGLLADAGIAGPTDAAHRE 247

Query: 336 DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
            L +A+WTTTPWT+PAN AV+VN +L YA+                   R G       +
Sbjct: 248 QLFVAIWTTTPWTLPANLAVSVNGQLDYAIC------------------RDGTTNGGTPR 289

Query: 396 VFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESG 455
            +++VA+ LV  L       L    TL G+ LE  +Y HP+ +R  PVVIGGDYITTE+G
Sbjct: 290 -YLVVAAQLVDQLRTSLERPLEPLLTLKGAQLEGIQYRHPLLDRTSPVVIGGDYITTETG 348

Query: 456 TGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLD 515
           TGLVHTAPGHG +D+ T  KYGLP+L PVD+ G  T EAG F+GL+VL D N A++  L 
Sbjct: 349 TGLVHTAPGHGVDDFHTGNKYGLPVLCPVDEAGTLTAEAGPFAGLNVLKDANPAIITALR 408

Query: 516 EQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +   L+ E+ YEH+YPYDWRTKKPTIFRATEQWFASV+GFR  A++AI  V+W+P
Sbjct: 409 DAGLLLAEQRYEHRYPYDWRTKKPTIFRATEQWFASVDGFRAQALEAIAVVEWLP 463



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 90/191 (47%), Positives = 132/191 (69%), Gaps = 7/191 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-RVGN 630
           ++ P YGADVLRLWVSSVDY+ DV +GP +++Q++D+YRK+R T RYLLGNLHD+    +
Sbjct: 643 KQEPPYGADVLRLWVSSVDYSADVPLGPGIVKQLADVYRKVRNTARYLLGNLHDFVPAEH 702

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +++ +DLP++D++ L +  ++++ +   +E Y+F++ FQ +Q F +VDLSN Y D+AKDR
Sbjct: 703 AVAIEDLPLLDRWMLQRTASLIEAVNADFERYEFYRFFQALQNFCVVDLSNVYLDIAKDR 762

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY        RRSCQTVL   +  +  +IAP+L H+AED+WQNLP+        A   VF
Sbjct: 763 LYVSAAGDVRRRSCQTVLHLVVERLAGLIAPVLCHMAEDIWQNLPYPV------AEASVF 816

Query: 751 ESKWPVLDEKW 761
           E  WP + E W
Sbjct: 817 ERGWPTVPESW 827


>gi|148243311|ref|YP_001228468.1| isoleucyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147851621|emb|CAK29115.1| Isoleucyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 959

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/470 (55%), Positives = 328/470 (69%), Gaps = 29/470 (6%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYAN 162
           E  YK T++L KT F MRAN+  REPE+   W +  ++ R++ +N G  F LHDGPPYAN
Sbjct: 5   ETSYKDTLNLLKTDFSMRANSRQREPELQGFWAELNLYNRLSRENPGPVFTLHDGPPYAN 64

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G LH+GHALNK LKDIIN+ +L+Q  K RY+PGWDCHGLPIELKVLQSL  + +++L P 
Sbjct: 65  GALHVGHALNKTLKDIINKVQLMQGKKARYIPGWDCHGLPIELKVLQSLKAEERRELKPL 124

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           +LR KA  +A+  V+ Q   F+R+G+W +W+ PYLTL   YEA+QI+VFG+M L G+IYR
Sbjct: 125 ELRRKAHAYAEQQVEGQRQGFRRWGIWGEWDIPYLTLQKRYEASQIDVFGRMVLAGHIYR 184

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVF--RMVSAPPSTSGLLNEFLPDLGLA 340
           G KPVHWSPSSRTALAEAELEYP+GH S S++  F    +S+  + +G+  E    L +A
Sbjct: 185 GLKPVHWSPSSRTALAEAELEYPDGHTSPSVFVAFPVEQLSSALAEAGVSCE---GLAVA 241

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AVAVN +L Y++ +                S  G  L        IV
Sbjct: 242 IWTTTPWTLPANLAVAVNGRLDYSICQ----------------SSSGGQL--------IV 277

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           ASDLV +L  +   KL   + + G  LE   Y HP+  R  PVVIGGDYITTE+GTGLVH
Sbjct: 278 ASDLVESLSQQLELKLKPLQQVKGEALEGLTYRHPLLERSSPVVIGGDYITTEAGTGLVH 337

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG +D+ T  KY LP+L PVD+ G  TEEAG F+GL+VL D N A++  L E  +L
Sbjct: 338 TAPGHGVDDFNTGRKYDLPVLCPVDEGGWLTEEAGPFAGLNVLKDANTAIISALQEAKAL 397

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           + EE YEH+YPYDWRTKKPTIFRATEQWFASVEGFR++A+ AI  V+W+P
Sbjct: 398 LAEERYEHRYPYDWRTKKPTIFRATEQWFASVEGFRESALSAIDSVEWLP 447



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 94/198 (47%), Positives = 135/198 (68%), Gaps = 7/198 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           ++ P YGADVLRLWVSSVDY+ DV +GP +++Q++D+YRK+R T RYLLGNLHD+    +
Sbjct: 633 KQEPPYGADVLRLWVSSVDYSADVPLGPGIVKQLADVYRKVRNTARYLLGNLHDFDPSRD 692

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++   DLP++D++ L +   I++ +   +E Y+F++ FQ +Q F +VDLSN Y D+AKDR
Sbjct: 693 AVPLADLPLLDRWMLQRTAKILEEVSGDFERYEFYRFFQTLQNFCVVDLSNVYLDIAKDR 752

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     SF RRSCQTV++  L  +  +IAP+L H+AED+WQ+LP  Y++E+ S    VF
Sbjct: 753 LYVSAADSFRRRSCQTVMALVLERLAGMIAPVLSHMAEDIWQHLP--YSVEEAS----VF 806

Query: 751 ESKWPVLDEKWRTFPVGE 768
              WP  D  W      E
Sbjct: 807 LRGWPQADASWSGLSSAE 824


>gi|110736691|dbj|BAF00309.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 374

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 274/377 (72%), Positives = 326/377 (86%), Gaps = 8/377 (2%)

Query: 1   MSFILKSFASNSSVSTPREAT-IAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLK 59
           MS   KSFA N     PREA  +AM+QSSSYRVLS ++CS+ R+   ++ F ++G SS+K
Sbjct: 1   MSSFFKSFAEN-----PREAAAMAMVQSSSYRVLSGKSCSNLRRNTPLDSFLAKGRSSVK 55

Query: 60  FLSFLNVTCYSICSGDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGM 119
             SFL V+ +S    +EF  SSKRRSRGPVMAAKKA+EGEK+E+G+YK TVDLPKT FGM
Sbjct: 56  AFSFLYVSRFSTEPNNEFGHSSKRRSRGPVMAAKKASEGEKQEDGKYKQTVDLPKTGFGM 115

Query: 120 RANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDII 179
           RAN+L REPE+ KLW+++QVF RV+D N+G +F+LHDGPPYANG+LHMGHALNKILKDII
Sbjct: 116 RANSLTREPELQKLWEENQVFKRVSDNNNGGSFILHDGPPYANGDLHMGHALNKILKDII 175

Query: 180 NRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQ 239
           NRYKLLQNYKV+YVPGWDCHGLPIELKVLQSLD++ +K+LTP KLRAKAAKFAKATVK Q
Sbjct: 176 NRYKLLQNYKVQYVPGWDCHGLPIELKVLQSLDQEVRKELTPLKLRAKAAKFAKATVKTQ 235

Query: 240 MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 299
           M SFKR+GVWADWNNPYLTLDPEYEAAQI VFGQM+L+GYIYRG+KPVHWSPSSRTALAE
Sbjct: 236 MESFKRFGVWADWNNPYLTLDPEYEAAQIGVFGQMALKGYIYRGRKPVHWSPSSRTALAE 295

Query: 300 AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNA 359
           AELEYPEGH+S+SIYA+F++V    + + LL+EF+P++ LAVWTTTPWT+PANAAVAVNA
Sbjct: 296 AELEYPEGHISKSIYAIFKLVGG--AKTSLLDEFIPNIYLAVWTTTPWTMPANAAVAVNA 353

Query: 360 KLQYAVVEIQSLLEGDS 376
           KLQY+VVE+QS  E +S
Sbjct: 354 KLQYSVVEVQSFSEDES 370


>gi|145345247|ref|XP_001417128.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577355|gb|ABO95421.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 949

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 261/453 (57%), Positives = 324/453 (71%), Gaps = 24/453 (5%)

Query: 119 MRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDI 178
           MRAN++ +EP++   W +  V+ R+  + DG  F LHDGPPYANG+LH+GHALNKILKD 
Sbjct: 1   MRANSVQKEPKMQAWWAERGVYERLRAREDGAAFTLHDGPPYANGDLHIGHALNKILKDF 60

Query: 179 INRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKA 238
           +NR++++   +VRYVPGWDCHGLPIELKVLQ++D +A+K LTP KLR KA  FA  TV +
Sbjct: 61  VNRWEMMNGKRVRYVPGWDCHGLPIELKVLQNMDAEARKALTPIKLRYKAKAFAMKTVAS 120

Query: 239 QMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALA 298
           Q   FKRYG+WADW+ PY+TL PEYEAAQ+EVFG+M L G+IYRG+KPVHWSPSS TALA
Sbjct: 121 QREQFKRYGIWADWDEPYMTLLPEYEAAQLEVFGKMFLNGHIYRGEKPVHWSPSSMTALA 180

Query: 299 EAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVN 358
           EAELEYPEGHVS+SIY  F +   P ST   L   L    LAVWTTTPWT+PANAAVAVN
Sbjct: 181 EAELEYPEGHVSQSIYVQFPVSDVPESTPSELKALLDGASLAVWTTTPWTMPANAAVAVN 240

Query: 359 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVI 418
           AKL Y+V  ++S                           ++VA  L   + +K  T L  
Sbjct: 241 AKLDYSVCRVES-----------------------TGATLVVAEGLREAVASKLETTLTT 277

Query: 419 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 478
             T  G D EN +Y HP   R+ PV+IGG+YITTE+GTGLVHTAPGHGQ+DY++ +KYGL
Sbjct: 278 LGTFKGQDFENVQYQHPFYERKSPVIIGGEYITTEAGTGLVHTAPGHGQDDYISGMKYGL 337

Query: 479 PILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 537
           P+ SPVD+ G FT EAG    G DVLGDGNV  ++ L    +L+ +E Y HKYPYDWRTK
Sbjct: 338 PLYSPVDNAGLFTAEAGSDLEGKDVLGDGNVLCIEKLTSAGALLKQEAYNHKYPYDWRTK 397

Query: 538 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           KPTIFRATEQWFASVEGFR+ A+  + +++++P
Sbjct: 398 KPTIFRATEQWFASVEGFREKALSELDKLEFIP 430



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 86/204 (42%), Positives = 128/204 (62%), Gaps = 5/204 (2%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISY 634
           PGYGAD LRLWV+S DYTGDV IG  +++Q S+ YRKLRGT+R+L+G L D++    ++Y
Sbjct: 613 PGYGADTLRLWVASTDYTGDVSIGMNIIKQTSEAYRKLRGTIRFLMGVLDDFKPTEGVAY 672

Query: 635 DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTG 694
           + LP  ++Y L +L+  ++ I  SY+S+++ ++   I  F    LSN Y DV+KD+LY G
Sbjct: 673 ESLPAFEKYILSRLDATMQEIETSYKSHEYSRVVAAITSFTTF-LSNVYLDVSKDKLYIG 731

Query: 695 GTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW 754
                 RR+CQTV+SA +  ++  IAP+ PH+AE+ +Q LP+    +    A  VF + W
Sbjct: 732 EQNDIKRRACQTVVSAIVERLIAAIAPLTPHMAEEAFQALPY----DKPGDAISVFIAGW 787

Query: 755 PVLDEKWRTFPVGEIYFWGKILEV 778
           P     W +    E+ FW   LE+
Sbjct: 788 PSRPSTWASIDADEVKFWDSFLEI 811


>gi|159902802|ref|YP_001550146.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|254782425|sp|A9BDK6.1|SYI_PROM4 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|159887978|gb|ABX08192.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 969

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 256/490 (52%), Positives = 325/490 (66%), Gaps = 35/490 (7%)

Query: 92  AKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN 151
            K+  +GE+     YK +++L KT+FGMRANA +REPE+   W D  + L +   N G +
Sbjct: 2   TKETRQGEQNRPS-YKESLNLLKTSFGMRANATLREPELQNFWADKGIDLELGLANKGPS 60

Query: 152 FVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL 211
           F LHDGPPYANG LHMGHALNK+LKDIIN++ +++ +KV +VPGWDCHGLPIELKVLQ+L
Sbjct: 61  FTLHDGPPYANGALHMGHALNKVLKDIINKFHIMRGHKVHFVPGWDCHGLPIELKVLQTL 120

Query: 212 DEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVF 271
               ++ LTP +LR KAA +A   VK QM  FKR+G+W +WN PYLTL  EYE+AQ+++F
Sbjct: 121 SNKERQALTPIQLRKKAAAYASKQVKGQMEGFKRWGIWGNWNKPYLTLQKEYESAQVKLF 180

Query: 272 GQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTS---- 327
           GQM L+GYIYRG KPVHWSPSSRTALAEAELEYPE H S S+Y  F ++  P S S    
Sbjct: 181 GQMVLKGYIYRGLKPVHWSPSSRTALAEAELEYPEAHTSPSVYVAFSVIHLPQSLSENLI 240

Query: 328 -------GLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPA 380
                  G   E    L + +WTTTPWT+PANAAV+VN+ L Y+ V              
Sbjct: 241 KQGLELPGDEVELSKRLKVCIWTTTPWTLPANAAVSVNSNLDYSFVR------------- 287

Query: 381 NKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQ 440
                      ++K   +I A++L+  +    G          G  L+   Y HP+  R 
Sbjct: 288 ----------HEEKGQILIFATELLEEVSEILGISFKQVANAKGESLKGILYKHPLYERT 337

Query: 441 CPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGL 500
            P+V+GG YITT+SGTGLVHTAPGHG +D+ T L+  L +  PVD++G FT EAGKF GL
Sbjct: 338 APIVLGGSYITTQSGTGLVHTAPGHGIDDFKTGLQNNLEVFCPVDEKGIFTSEAGKFEGL 397

Query: 501 DVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAM 560
           +VL D N  ++  L+   SL+ E PY HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A+
Sbjct: 398 NVLKDANKEIISSLEISGSLLKELPYVHKYPYDWRTKKPTIFRATEQWFASVEGFREDAL 457

Query: 561 DAIGQVKWVP 570
            AI  V+W+P
Sbjct: 458 KAIDDVEWLP 467



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 92/195 (47%), Positives = 131/195 (67%), Gaps = 7/195 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGNLHD+    NS+ 
Sbjct: 651 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTSRYLLGNLHDFDPKKNSVD 710

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            D+LP++D++ L +   ++  I  ++E Y+F + FQ++Q F  VDLSNFY D+AKDRLY 
Sbjct: 711 IDNLPILDKWMLNRTAEVIDEITLAFEKYEFSRFFQLLQSFCTVDLSNFYLDIAKDRLYV 770

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RR+CQTV++  +  +  +I+P+L H+AED+WQN+P+  +       E VF+  
Sbjct: 771 SAPDDPRRRACQTVMALIIEKLAGLISPVLCHMAEDIWQNIPYQLS------EESVFKRG 824

Query: 754 WPVLDEKWRTFPVGE 768
           WPV    W+   + E
Sbjct: 825 WPVSPSNWKRASLTE 839


>gi|428216724|ref|YP_007101189.1| isoleucyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
 gi|427988506|gb|AFY68761.1| Isoleucyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
          Length = 960

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 263/477 (55%), Positives = 325/477 (68%), Gaps = 23/477 (4%)

Query: 99  EKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGP 158
           E +E   YK TV+LP T F MRANA  +EPEI K W +  ++  +A  N GE F+LHDGP
Sbjct: 6   ETRENPDYKDTVNLPHTDFSMRANAKQKEPEIQKFWQEAGIYEDLAANNPGEKFILHDGP 65

Query: 159 PYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKD 218
           PYANGNLHMGHALNKILKDIINRY++L+  KVRYV GWDCHGLPIELKVLQ L    +K+
Sbjct: 66  PYANGNLHMGHALNKILKDIINRYQILRGRKVRYVLGWDCHGLPIELKVLQKLKSSERKE 125

Query: 219 LTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQG 278
           LT   LR KA  +A  T+  Q   FKR+GVW D+++ Y TL PEYEAAQI VFGQM L+G
Sbjct: 126 LTAISLRHKARDYALQTIADQAEGFKRWGVWGDYDHAYYTLKPEYEAAQINVFGQMVLKG 185

Query: 279 YIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL---- 334
           YIYRG KPV+WSPSS+TALAEAELEYPEGH SRSIY  F +          L + L    
Sbjct: 186 YIYRGLKPVYWSPSSQTALAEAELEYPEGHTSRSIYVAFPVTEIGDKLKAALGKNLDAVP 245

Query: 335 -PDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQ 393
              L   +WTTTPWT+P N AV+ N +L+Y++V+   L +                  DQ
Sbjct: 246 ADRLYAMIWTTTPWTIPGNLAVSANPRLKYSLVKATGLDD-----------------TDQ 288

Query: 394 KKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTE 453
              + +VA++LV  L      +L    T++G  LE+    HP+ +R  P+++ G+++T E
Sbjct: 289 GDRYYVVATELVEQLAKLLEQELTEIATMSGEALEHTVCKHPIFDRASPILL-GEHVTAE 347

Query: 454 SGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKY 513
           SGTGLVHTAPGHG++DY    KYGL +LSPV+D G FTEEAG+F+GL VL +GN AV+  
Sbjct: 348 SGTGLVHTAPGHGRDDYNVGQKYGLGLLSPVNDYGVFTEEAGQFAGLKVLKEGNQAVIDA 407

Query: 514 LDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L E   L+ EE Y+HKYPYDWRTKKPTI RATEQWFASV+GFR AA+ AI  V W+P
Sbjct: 408 LSETGLLLKEEAYQHKYPYDWRTKKPTIVRATEQWFASVDGFRDAALAAIRSVNWIP 464



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 99/199 (49%), Positives = 132/199 (66%), Gaps = 8/199 (4%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGADVLRLW SSVDY+ DV  G  +L Q+ D+ RK+R T R+LL NL+D+    N
Sbjct: 645 KQEPAYGADVLRLWASSVDYSSDVPFGKTILSQIFDVSRKIRNTARFLLSNLYDFDPAKN 704

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I+YD L  +D+Y L +L  +   I ++++SYQFF+ FQ++Q F  VDLSNFY D+AKDR
Sbjct: 705 AIAYDQLTELDKYLLHRLYEVGTEITKAFDSYQFFRFFQLMQNFCAVDLSNFYLDIAKDR 764

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGS---AAE 747
           LY     S  RRSCQTV++  L  IV+ IAP+L H AED+WQ+LP  Y +E  S   A  
Sbjct: 765 LYISAADSPRRRSCQTVMAIALNLIVKAIAPVLCHTAEDIWQHLP--YPVEQKSVFQAGW 822

Query: 748 FVFESKW--PVLDEKWRTF 764
           F   S W  P L EKW++ 
Sbjct: 823 FELNSTWQQPELAEKWQSL 841


>gi|72383441|ref|YP_292796.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|84029557|sp|Q46HD5.1|SYI_PROMT RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|72003291|gb|AAZ59093.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 967

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 255/481 (53%), Positives = 327/481 (67%), Gaps = 34/481 (7%)

Query: 100 KKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPP 159
           +K+   YK T++L +T FGMRANA +REPE+   W +  +   +   N GE F LHDGPP
Sbjct: 9   QKDRPTYKDTLNLLQTNFGMRANATLREPELQAFWREKNIDFELGLNNSGETFTLHDGPP 68

Query: 160 YANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDL 219
           YANG LHMGHALNK+LKDIIN+++ ++  KV YVPGWDCHGLPIELKVLQ++D+  + +L
Sbjct: 69  YANGTLHMGHALNKVLKDIINKFQTMKGKKVCYVPGWDCHGLPIELKVLQAMDKSQRAEL 128

Query: 220 TPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGY 279
           TP KLR KAA +AK  V  QM  FKR+GVW DW+ PYL+LD ++EA+QI++FG+M  +GY
Sbjct: 129 TPIKLRKKAAAYAKKQVSQQMDGFKRWGVWGDWDQPYLSLDKKFEASQIKLFGEMVFKGY 188

Query: 280 IYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD--- 336
           IYRG KPVHWSPSS+TALAEAELEYP GH S+SIY  F++   P   +  +++  PD   
Sbjct: 189 IYRGLKPVHWSPSSQTALAEAELEYPTGHTSKSIYVGFKVNQIPKRLTQEISKQAPDLIN 248

Query: 337 -------LGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNV 389
                  L L +WTTTPWT+PAN A++VN KL+Y + +                      
Sbjct: 249 SEGKLKELKLVIWTTTPWTIPANEAISVNQKLEYVIAQ---------------------- 286

Query: 390 LKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDY 449
                +  II+A+DL+  +    G     +  + GS L+   Y HP+ ++  PVV+GGDY
Sbjct: 287 --SSDRSLIIIANDLLQEVSKSVGINYEKRVLIKGSILDGIIYKHPLFDKISPVVLGGDY 344

Query: 450 ITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVA 509
           ITTESGTGLVHTAPGHG +D+ T+ KY L I  PVD++G  T+EAGKF GL+VL D N  
Sbjct: 345 ITTESGTGLVHTAPGHGVDDFNTAKKYNLSISCPVDEKGFLTKEAGKFEGLNVLKDANSV 404

Query: 510 VVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
           ++  L    SL+ E PYEH+YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V W+
Sbjct: 405 IISDLINAGSLLKEIPYEHRYPYDWRTKKPTIFRATEQWFASVEGFRDKALSAIEDVIWL 464

Query: 570 P 570
           P
Sbjct: 465 P 465



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 98/190 (51%), Positives = 134/190 (70%), Gaps = 7/190 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 633
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGNL+D+    +SI 
Sbjct: 649 PAYGADVLRLWVSSVDYSADVPIGSNILKQISDVYRKVRNTSRYLLGNLYDFDYKIDSID 708

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
             +LP++D++ L +   ++  I ++Y +++F K FQ IQ F +VDLSNFY D+AKDRLY 
Sbjct: 709 IANLPLLDKWMLNRTAEVIDEISDAYNNFEFSKFFQTIQNFCVVDLSNFYLDIAKDRLYV 768

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
              + F RRSCQTVLS  +  I  +IAP+L H+AED+WQN+P  Y LE+ S    VF+  
Sbjct: 769 SSKSDFRRRSCQTVLSLVIEKISGLIAPVLCHMAEDIWQNIP--YDLEEAS----VFQRG 822

Query: 754 WPVLDEKWRT 763
           WP + + W+ 
Sbjct: 823 WPNVPKSWKN 832


>gi|119493820|ref|ZP_01624387.1| isoleucyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119452412|gb|EAW33601.1| isoleucyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 402

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 250/419 (59%), Positives = 311/419 (74%), Gaps = 19/419 (4%)

Query: 90  MAAKKAAEGEKKEEG--RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN 147
           MA +    G+++E+    YK TV+LPKT F MRANA+ REP++ K W ++Q++ R+ + N
Sbjct: 1   MAERSDVNGKEQEKAAKSYKDTVNLPKTKFDMRANAVKREPQLQKFWAENQIYERLGENN 60

Query: 148 DGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKV 207
            GE F+LHDGPPYANG LH+GHALNKILKDIINRY+LLQ  KVRYVPGWDCHGLPIELKV
Sbjct: 61  PGEVFILHDGPPYANGALHIGHALNKILKDIINRYQLLQGRKVRYVPGWDCHGLPIELKV 120

Query: 208 LQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ 267
           LQ + +  ++ LTP  LR KA +FA  TV  Q  SFKRYGVW DW++PYLTL PEYEAAQ
Sbjct: 121 LQQMKQSEREALTPLILRQKAKEFALETVDKQRESFKRYGVWGDWDHPYLTLKPEYEAAQ 180

Query: 268 IEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTS 327
           I VF QM L+GYIYRG KPVHWSPSS+TALAEAELEYPEGHVSRS++A F + S   S  
Sbjct: 181 IGVFAQMVLKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHVSRSLFAAFPITSLAESVK 240

Query: 328 GLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPG 387
             L  FLPDLG+A+WTTTPWT+P N AV++N +L YAVVE     + ++  P   K    
Sbjct: 241 SELTPFLPDLGIAIWTTTPWTIPGNLAVSLNPELTYAVVET----DKNTEHPIPFK---- 292

Query: 388 NVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGG 447
                    +++VA++LV  L A +G  L +K T+ G DLE+  Y HP+ +R+ PVVIGG
Sbjct: 293 ---------YLLVAAELVERLSATFGQTLTVKATIKGKDLEHSTYKHPLFDRESPVVIGG 343

Query: 448 DYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDG 506
           DY+TTESGTGLVHTAPGHGQED++   +YGLP+L PVD +G FT+EAG+F+GL+VL D 
Sbjct: 344 DYVTTESGTGLVHTAPGHGQEDFIVGQRYGLPVLCPVDADGNFTQEAGEFAGLNVLKDA 402


>gi|443477054|ref|ZP_21066927.1| Isoleucyl-tRNA synthetase [Pseudanabaena biceps PCC 7429]
 gi|443017893|gb|ELS32243.1| Isoleucyl-tRNA synthetase [Pseudanabaena biceps PCC 7429]
          Length = 1003

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 256/470 (54%), Positives = 319/470 (67%), Gaps = 29/470 (6%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E   YK TV+LP+T F MRANA++REPEI K W +  +F  ++  N G+ F LHDGPPYA
Sbjct: 17  ELSEYKDTVNLPQTDFSMRANAIIREPEIQKFWQEQGIFEDLSHNNKGDVFTLHDGPPYA 76

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LHMGHALNK+LKDIINRYKLL+ YKVRYV GWDCHGLPIELKVLQ++  + + +LTP
Sbjct: 77  NGTLHMGHALNKVLKDIINRYKLLRGYKVRYVLGWDCHGLPIELKVLQNIKAEERANLTP 136

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA +FA  T+  Q   FKR+GVW D+ N Y TL PEYEAAQI VFG+M+L+GYIY
Sbjct: 137 LQLRKKAKEFALQTINEQATGFKRWGVWGDYENAYYTLKPEYEAAQIGVFGRMTLKGYIY 196

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPV+WSPSS TALAEAELEYPE HVSRSIY  F + +       + +  L +L   +
Sbjct: 197 RGLKPVYWSPSSHTALAEAELEYPENHVSRSIYVAFPVTNPSEKLKAIAD--LTNLHAVI 254

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++ N  L Y++V         +A   N                 IVA
Sbjct: 255 WTTTPWTIPANLGISANPHLSYSIV---------AAGDKN----------------YIVA 289

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++LV  L A +   L +K T  G  LE     HP+ +R  P+V+ GD++T ESGTGLVHT
Sbjct: 290 TELVEKLAATFEEALEVKYTFKGDVLEGAIAKHPIVDRPSPIVL-GDHVTAESGTGLVHT 348

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSL 520
           AP HGQ+D++   KY L ++S VDD G F E+AG   +GL VL +GN  VV+ L    +L
Sbjct: 349 APNHGQDDFIVGKKYNLGMISLVDDRGIFNEDAGADLAGLSVLKEGNAKVVEILTANGTL 408

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           I EE Y HKYPYDWRTKKP I RATEQWFASV+GFR+ A+ +I +V W+P
Sbjct: 409 IKEEAYNHKYPYDWRTKKPVIVRATEQWFASVDGFREEALKSIKEVNWIP 458



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 93/192 (48%), Positives = 127/192 (66%), Gaps = 7/192 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           ++ P YGADV+RLW +SVDY GDV IG  +L QMSD+ RK+R T R+LL NL D++    
Sbjct: 647 KKEPPYGADVIRLWAASVDYNGDVPIGKTILAQMSDVSRKIRNTARFLLSNLFDFQPAEH 706

Query: 632 -ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            + Y DL   D+Y L +L  + K+I E+Y+ +QF + FQ+IQ F  VDLSNFY D+AKDR
Sbjct: 707 LVPYADLTESDRYILHRLAEVTKDITEAYKKFQFSRFFQVIQNFCTVDLSNFYLDIAKDR 766

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     +  RRSCQTVL   L +I + IAP+L H AED+WQ+LP+       +  + VF
Sbjct: 767 LYISAPNAARRRSCQTVLMYCLETIAKAIAPVLAHTAEDIWQHLPYP------APTKSVF 820

Query: 751 ESKWPVLDEKWR 762
           +S W ++D +W 
Sbjct: 821 QSGWFIVDPEWH 832


>gi|323454274|gb|EGB10144.1| hypothetical protein AURANDRAFT_10097, partial [Aureococcus
           anophagefferens]
          Length = 1008

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 266/482 (55%), Positives = 319/482 (66%), Gaps = 43/482 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           Y+ TV LP+T+FG RANA+ +EPE+ K W D +V+ R+     G  F LHDGPPYANG+L
Sbjct: 1   YRGTVLLPETSFGQRANAINKEPELQKFWADTKVYERLWADAPGAAFTLHDGPPYANGDL 60

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKK-------- 217
           H+GHALNK+LKD INRY+ L+  KVRYVPGWDCHGLPIELKVLQ+++ + KK        
Sbjct: 61  HIGHALNKVLKDFINRYRSLRGDKVRYVPGWDCHGLPIELKVLQAINAENKKIKKKTGAT 120

Query: 218 --DLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMS 275
              LTP +LR +AA FA+ TV AQ  SF+RYGVWADW+ PYLTL P YEAAQ+ VF  M 
Sbjct: 121 PPPLTPLELRRRAAGFAEETVAAQRDSFRRYGVWADWDAPYLTLQPAYEAAQLRVFATMF 180

Query: 276 LQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP 335
            QG+IYRG KPV +SPSSRTALAEAELEYP+GH S S+YA   ++   PS          
Sbjct: 181 EQGHIYRGLKPVWYSPSSRTALAEAELEYPDGHTSPSVYAALDVLE--PSAGLAAVAGGA 238

Query: 336 DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
           D  LAVWTTTPWT+PAN AVAVN  L YAVV                         D  K
Sbjct: 239 DAKLAVWTTTPWTLPANLAVAVNGDLDYAVV-------------------------DSPK 273

Query: 396 VFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDN-----RQCPVVIGGDYI 450
             ++VA DLV  L AK+  +L ++ +L G+ L    Y  PV N     R   VV+GGDYI
Sbjct: 274 GALVVAVDLVDALAAKFACELTVRGSLKGAALAGTTYARPVANGALGARPAAVVVGGDYI 333

Query: 451 TTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVA 509
           T+E GTGLVHTAPGHG +DY T LK+ LP  SPVD  GKFT +AG    GL VLG G   
Sbjct: 334 TSEGGTGLVHTAPGHGMDDYQTGLKHDLPPFSPVDAAGKFTADAGDGLEGLPVLGAGGEE 393

Query: 510 VVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
           +   L+   +L++ EPYEH+YPYDWRTKKP + RAT+QWFASV  FRQ A+DAI  VKW 
Sbjct: 394 IAARLEAAGNLLLAEPYEHRYPYDWRTKKPVLMRATDQWFASVSSFRQDALDAIDAVKWT 453

Query: 570 PP 571
           PP
Sbjct: 454 PP 455



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 113/185 (61%), Gaps = 15/185 (8%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHD--------- 625
           P YGADVLRLWV+SVDYT DV +G   L+Q+ + YRKLR TLRY+ GN++          
Sbjct: 650 PPYGADVLRLWVASVDYTADVRLGKNALKQVFEQYRKLRNTLRYMAGNVNGAPTRGTDAF 709

Query: 626 --WRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFY 683
             +   ++ +Y  LP +D++ L +L  + +   ++YE+YQF +    I  F + +LS  Y
Sbjct: 710 AAYDARDARTYASLPDLDKWLLGRLGALERECFDAYENYQFSRAVGAISAFAVNELSALY 769

Query: 684 FDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYT 739
            DVAKDR+Y     +  R +C   L A L  + R++AP+LPHLAE+++Q LP+    AY+
Sbjct: 770 LDVAKDRMYVSPAKAGRRVTCMATLVACLDVLPRLLAPLLPHLAEELFQALPYAAGDAYS 829

Query: 740 LEDGS 744
            E GS
Sbjct: 830 AERGS 834


>gi|37523220|ref|NP_926597.1| isoleucyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|81708786|sp|Q7NF75.1|SYI_GLOVI RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|35214223|dbj|BAC91592.1| isoleucyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 983

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 264/505 (52%), Positives = 327/505 (64%), Gaps = 65/505 (12%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK TV  PKT F MRANA  RE EI + W++  ++ R+A +N GE F+LHDGPPYANG L
Sbjct: 8   YKQTVRTPKTDFPMRANASTREVEIQRFWEEQGIYGRLAQENPGEIFILHDGPPYANGEL 67

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDIINRY+LLQ  +VRYVPGWDCHGLPIELKVLQ L +  +  LTP  +R
Sbjct: 68  HVGHALNKILKDIINRYQLLQGRRVRYVPGWDCHGLPIELKVLQDLSQAERSQLTPLDVR 127

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            +A  FA+ TV++Q AS+KR+GVW DW++PYLTL PEYEAAQ+ VFG+M+L+GYIYRG K
Sbjct: 128 TRARDFAQRTVQSQCASYKRFGVWGDWDHPYLTLQPEYEAAQLGVFGKMALKGYIYRGLK 187

Query: 286 PVHWSPSSRTALAEAELEYPE------GHVSRSIYAVFRMVS-APPSTS----------- 327
           PVHWSPSS+TALAEAELEYP        H SRS+Y  F ++S A P T+           
Sbjct: 188 PVHWSPSSQTALAEAELEYPTKDDGSPAHTSRSVYVKFPLISIAAPETATVMAAELLPRL 247

Query: 328 ------------GLLNEF--LPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLE 373
                        LL E   LP++ +A+WTTTPWT+P N AVA+N +L YA+V       
Sbjct: 248 SAFHDREEELIDALLGERDDLPEIAVAIWTTTPWTLPGNLAVALNGELDYALV------- 300

Query: 374 GDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYV 433
                               +   +IVA++LV  L     T+     T  G +LE     
Sbjct: 301 -----------------ASDEHGLLIVAAELVERLAGTLATRFETIATFRGRELEGSLLA 343

Query: 434 HPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEE 493
           HP+  R  P+V+ GD++TTESGTG VHTAPGHG ED+  + +Y L +LSPVDD G+FT E
Sbjct: 344 HPLFRRTSPIVL-GDHVTTESGTGAVHTAPGHGSEDFELAQRYNLGVLSPVDDYGRFTRE 402

Query: 494 AGK--------FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRAT 545
           A          F+G  VL DGN AV++ L    +L+ EE Y HKYPYDWRTKKPTIFRAT
Sbjct: 403 ADSDRRENLPVFAGKAVLSDGNQAVIEALSAAGALLKEEAYVHKYPYDWRTKKPTIFRAT 462

Query: 546 EQWFASVEGFRQAAMDAIGQVKWVP 570
            QWFASV  FR  A+ AI Q +W+P
Sbjct: 463 TQWFASVSDFRPQALSAIAQTEWIP 487



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 99/191 (51%), Positives = 133/191 (69%), Gaps = 7/191 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           ++ P YGADVLRLWV+SVDYT D ++GP VL Q++++YRK+R T RYLLG+L+D+     
Sbjct: 671 KQHPAYGADVLRLWVASVDYTSDQLVGPSVLAQIAEVYRKIRNTARYLLGSLNDFVPERD 730

Query: 632 -ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            +++D L  +DQY L +L  +   + +++ESYQF + FQ IQ F + DLSNFY D++KDR
Sbjct: 731 LVAFDSLGEVDQYLLHRLSVVHLEVTQAFESYQFSRFFQTIQNFCVADLSNFYLDISKDR 790

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY     S  RRSCQTVL   L S+ R+IAP+LPHLAED+WQ+LP  Y   D S    VF
Sbjct: 791 LYISAEVSLRRRSCQTVLYRVLESLTRLIAPVLPHLAEDIWQHLP--YPRSDAS----VF 844

Query: 751 ESKWPVLDEKW 761
           E+ WPV   +W
Sbjct: 845 EAGWPVDHSQW 855


>gi|124025030|ref|YP_001014146.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|166229754|sp|A2C071.1|SYI_PROM1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|123960098|gb|ABM74881.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 967

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 253/484 (52%), Positives = 325/484 (67%), Gaps = 34/484 (7%)

Query: 97  EGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHD 156
           +  +K+   YK T++L +T FGMRANA +REPE+   W +  +   +   N GE F LHD
Sbjct: 6   KNSQKDRPTYKDTLNLLQTNFGMRANATLREPELQAFWREKNIDFELGLNNTGETFTLHD 65

Query: 157 GPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAK 216
           GPPYANG LHMGHALNK+LKDIIN+++ ++  KV YVPGWDCHGLPIELKVLQ++D+  +
Sbjct: 66  GPPYANGTLHMGHALNKVLKDIINKFQTMKGKKVCYVPGWDCHGLPIELKVLQAMDKSQR 125

Query: 217 KDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSL 276
            +LTP KLR KAA +AK  V  QM  FKR+GVW DW+ PYL+LD ++EA+QI++FG+M  
Sbjct: 126 AELTPIKLRKKAAAYAKKQVSQQMDGFKRWGVWGDWDQPYLSLDKKFEASQIKLFGEMVF 185

Query: 277 QGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD 336
           +GYIYRG KPVHWSPSS+TALAEAELEYP GH S+SIY  F++   P   +  +++  PD
Sbjct: 186 KGYIYRGLKPVHWSPSSQTALAEAELEYPTGHTSKSIYVGFKVNQIPKRLTQEISKQAPD 245

Query: 337 L----------GLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRP 386
           L           L +WTTTPWT+PAN A++VN KL+Y + +                   
Sbjct: 246 LINSEGKLKEVKLVIWTTTPWTIPANEAISVNQKLEYVIAQ------------------- 286

Query: 387 GNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIG 446
                   +  II+A+DL+  +    G     +  + GS L+   Y HP+ ++  PVV+G
Sbjct: 287 -----SSDRSLIIIANDLLDEVSKSVGINYEKRVLIKGSILDGIIYKHPLFDKISPVVLG 341

Query: 447 GDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDG 506
           GDYITTESGTGLVHTAPGHG +D+ T  KY L I   VD +G  T+EAGK+ GL+VL D 
Sbjct: 342 GDYITTESGTGLVHTAPGHGVDDFNTGKKYNLSISCTVDAKGFLTKEAGKYEGLNVLKDA 401

Query: 507 NVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQV 566
           N  ++  L    SL+ E PYEH+YPYDWRTKKPTIFRATEQWFASVEGFR  A+ AI  V
Sbjct: 402 NSVIISDLINSGSLLKEIPYEHRYPYDWRTKKPTIFRATEQWFASVEGFRDKALSAIEDV 461

Query: 567 KWVP 570
            W+P
Sbjct: 462 IWLP 465



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 99/190 (52%), Positives = 134/190 (70%), Gaps = 7/190 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 633
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGNL+D+    +SI 
Sbjct: 649 PAYGADVLRLWVSSVDYSADVPIGSNILKQISDVYRKVRNTSRYLLGNLYDFDYKIDSID 708

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
             +LP++D++ L +   ++  I ++Y +++F K FQ IQ F +VDLSNFY D+AKDRLY 
Sbjct: 709 IANLPLLDKWMLNRTAEVIDEISDAYNNFEFSKFFQTIQNFCVVDLSNFYLDIAKDRLYV 768

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
              + F RRSCQTVLS  +  I  +IAP+L H+AED+WQN+P  Y LE+ S    VF+  
Sbjct: 769 SSKSDFRRRSCQTVLSLVIEKISGLIAPVLCHMAEDIWQNIP--YDLEEAS----VFQRG 822

Query: 754 WPVLDEKWRT 763
           WP + + WR 
Sbjct: 823 WPNVPKSWRN 832


>gi|449015875|dbj|BAM79277.1| isoleucine--tRNA ligase [Cyanidioschyzon merolae strain 10D]
          Length = 1079

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 266/530 (50%), Positives = 352/530 (66%), Gaps = 49/530 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKND-GENFVLHDGPPYANGN 164
           YKHTV LP+T+F  RAN+  REP+I + W++++++  + + N     F+LHDGPPYANG+
Sbjct: 110 YKHTVSLPETSFSQRANSTEREPQIQRFWEENRIYEGLYEDNSRNAEFLLHDGPPYANGS 169

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKDIINRY +L   +VR+VPGWDCHGLPIELK +QS   + ++ L P ++
Sbjct: 170 LHMGHALNKILKDIINRYFILCGKRVRFVPGWDCHGLPIELKAVQSARSNHREALDPLQI 229

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R  A KFA   ++ Q   FKRYGVW  WN PYLTLD +YEAAQ+ +FG+M L+GYIYRG+
Sbjct: 230 RLLARKFALEAIEEQRKGFKRYGVWGTWNAPYLTLDHQYEAAQVRIFGEMFLKGYIYRGR 289

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD-LGLAVWT 343
           KPV+WSPSSRTALAEAELEYP+ HVSRS Y  F +V A     G+++E   D   +A+WT
Sbjct: 290 KPVYWSPSSRTALAEAELEYPDVHVSRSAYVAFEVVDA-GKLRGIISELEFDSFRVAIWT 348

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN AVAVN  L Y++V ++           +++ +P  +L        +VA D
Sbjct: 349 TTPWTIPANRAVAVNPNLPYSIVALE-----------DEQGKPCTLL--------VVAQD 389

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQC-PVVIGGDYITTESGTGLVHTA 462
           LV TLE K    L  KK + GS+L    Y HP+   +   VV GGDYITTESGTGLVHTA
Sbjct: 390 LVETLEQKLHRPLSNKKIVPGSELVGMTYRHPLYPMEVYRVVAGGDYITTESGTGLVHTA 449

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PGHG EDY   L+  L + +PVDD G+FT +AG + +GL VL +GN  V++ L    +L+
Sbjct: 450 PGHGLEDYNVGLRESLEVFAPVDDVGRFTSDAGPELAGLPVLQEGNARVLELLRSSNALL 509

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADV 581
           +EE YEHKYPYDWRT++PTI RATEQWFASV  FR  A++A+  V+WVPP      G + 
Sbjct: 510 LEEKYEHKYPYDWRTREPTIVRATEQWFASVRQFRDKALEALQSVQWVPPA-----GENR 564

Query: 582 LRLWVSSVD--------------------YTGDVMIGPQVLRQMSDIYRK 611
           +R  + S D                     TG+ +I  ++++ +S+I+ K
Sbjct: 565 IRGMIESRDDWCISRQRPWGVPIPVFYDEDTGEAVISMEIIQYVSEIFAK 614



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 81/188 (43%), Positives = 121/188 (64%), Gaps = 6/188 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-- 629
           ++ P  GADVLRLWV+SVDY  DV+IGP +L+Q +D YRK+R TLR+L GN+  W     
Sbjct: 746 KKQPALGADVLRLWVASVDYMSDVLIGPTILKQTADAYRKIRNTLRFLAGNVPRWDETCP 805

Query: 630 ---NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
              N+++  +LP +D+Y L +   ++K+I ++Y+++ F +IFQ + RF + DLSNFY D+
Sbjct: 806 VSVNALNDANLPSLDRYILRRAAAVLKDIEDAYKNFTFNRIFQSVLRFCVADLSNFYLDI 865

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 746
           AKDR Y        R++CQ  + A L+ + R +APILPH  ED+WQ L     L  G+  
Sbjct: 866 AKDRCYVAAPDEPRRQTCQATMWAILMDMARALAPILPHTVEDLWQCLRKDGKLPSGAPI 925

Query: 747 EFVFESKW 754
             +F++ W
Sbjct: 926 S-IFQNGW 932


>gi|33860796|ref|NP_892357.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|81576445|sp|Q7V352.1|SYI_PROMP RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|33633738|emb|CAE18697.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 965

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 253/487 (51%), Positives = 323/487 (66%), Gaps = 33/487 (6%)

Query: 93  KKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF 152
           K     EKK    YK T++L KT F MRAN+++REPEIH+ W  +++ L +   N G+NF
Sbjct: 2   KSKHNKEKKSGFSYKETLNLLKTDFSMRANSVIREPEIHEFWSRNKIDLELGSTNSGKNF 61

Query: 153 VLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD 212
            LHDGPPYANG+LHMGHALNK+LKDIIN+YK LQ +KV ++PGWDCHGLPIELKVLQSL 
Sbjct: 62  TLHDGPPYANGSLHMGHALNKVLKDIINKYKTLQGFKVHFIPGWDCHGLPIELKVLQSLK 121

Query: 213 EDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFG 272
            + +++L    LR KA  +AK  +  Q+  FKR+G+W DW+NPYLTL   YE+AQI VFG
Sbjct: 122 SNERRNLDSLGLRKKATDYAKIQINNQLEGFKRWGIWGDWDNPYLTLKKNYESAQIGVFG 181

Query: 273 QMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPST------ 326
           +M L GYIYRG KPVHWSPSSRTALAEAELEYPE H S+SIY    +     +       
Sbjct: 182 KMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPEEHFSKSIYVSLNITKLSDAVLLKLEE 241

Query: 327 SGLLNEFLPDLG---LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKK 383
             L N+ L  L    +A+WTTTPWT+P N AVA+N ++ Y     Q+             
Sbjct: 242 KDLRNKLLSSLNKLFIAIWTTTPWTIPGNEAVAINPRINYVFASDQN------------- 288

Query: 384 SRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPV 443
              GN+         + A DL+  +  K   +  +   + GS LE   Y HP  N+ C +
Sbjct: 289 ---GNIY--------LFARDLISEICEKLDREFNVLLDVKGSLLEGLEYKHPTKNKFCNI 337

Query: 444 VIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVL 503
           VIGGDYITTESGTG+VHTAPGHG +D+    KY LPI   VD++G   + A KF GL+VL
Sbjct: 338 VIGGDYITTESGTGIVHTAPGHGMDDFNVGQKYQLPITCIVDEKGNLNKHAEKFCGLNVL 397

Query: 504 GDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
            D N  +++ L++   L+++E Y+H+YPYDWRTKKPTIFRATEQWFASVEGFR +A+ AI
Sbjct: 398 KDANDLIIEDLEKNNLLLLKENYKHRYPYDWRTKKPTIFRATEQWFASVEGFRSSALKAI 457

Query: 564 GQVKWVP 570
             V+W+P
Sbjct: 458 EDVEWMP 464



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 98/188 (52%), Positives = 132/188 (70%), Gaps = 7/188 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 633
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGN+HD+      I 
Sbjct: 648 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPALEEID 707

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            D LP++DQ+ L +L  +   +  +YE+Y+F K FQI+Q F +VDLSNFY D+AKDRLY 
Sbjct: 708 IDQLPLLDQWMLNRLVEVSDEVTIAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYV 767

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
              T F RRSCQ V+S  + ++  +I+P+L H+AED+WQN+P++ T+E       VFE +
Sbjct: 768 SAKTQFRRRSCQFVMSRIVENLAVIISPVLCHMAEDIWQNIPYS-TIEKS-----VFERR 821

Query: 754 WPVLDEKW 761
           WP   E W
Sbjct: 822 WPKFPESW 829


>gi|194476997|ref|YP_002049176.1| isoleucyl-tRNA synthetase [Paulinella chromatophora]
 gi|171192004|gb|ACB42966.1| isoleucyl-tRNA synthetase [Paulinella chromatophora]
          Length = 967

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 252/480 (52%), Positives = 319/480 (66%), Gaps = 43/480 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK T++L KT F MRANA +REPE+   W+  + + ++++ N GE FVLHDGPPYANG+L
Sbjct: 9   YKDTLNLLKTEFSMRANAAIREPELQSFWEKEKTYEKLSNSNSGEKFVLHDGPPYANGDL 68

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGH LNK+LKDIIN+Y+LL+  KV +VPGWDCHGLPIELKVLQSL+   ++ LTP  LR
Sbjct: 69  HMGHVLNKVLKDIINKYQLLRGRKVCFVPGWDCHGLPIELKVLQSLESKERQILTPIALR 128

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            KA ++AK  +K Q A F R+GVW +W+ PYLT + +YEA QI VFG M L G+IYRG K
Sbjct: 129 KKAKEYAKKQIKIQKAGFIRWGVWGEWDKPYLTFNKDYEAQQIGVFGNMVLAGHIYRGLK 188

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA----- 340
           PVHWSPSSRTALAEAELEYP+ H+S S+Y  F ++     T  L  E L   GLA     
Sbjct: 189 PVHWSPSSRTALAEAELEYPDDHISPSVYVSFPIIEL---TENLCQE-LKKQGLALNRID 244

Query: 341 ----------VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVL 390
                     +WTTTPWT+PAN  ++V+A L+Y VV                        
Sbjct: 245 QNLKRYFDVVIWTTTPWTLPANLGISVSASLEYCVV------------------------ 280

Query: 391 KDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYI 450
            D++   +I+A  LV  L         IK T+ G +LE   Y +P+ +R   V++GGDYI
Sbjct: 281 VDEQNRHLIIAKVLVDNLSTILDRSFKIKATIKGFELEGLIYRNPLIDRTNTVILGGDYI 340

Query: 451 TTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAV 510
           TTE+GTGLVHTAPGHG +D+ T   Y LPIL PVD  G  T EAG FSGL+VL D N ++
Sbjct: 341 TTETGTGLVHTAPGHGVDDFNTGHSYNLPILCPVDQAGTLTSEAGAFSGLNVLKDANTSI 400

Query: 511 VKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++ L     LI +E Y H+YPYDWRTKKPTIFR TEQWFAS+EGFR+ A++AI +V W+P
Sbjct: 401 IQALHITNDLIKKEDYNHRYPYDWRTKKPTIFRTTEQWFASLEGFRKKALEAIQEVVWIP 460



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 95/192 (49%), Positives = 132/192 (68%), Gaps = 7/192 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           ++ P YGAD+LRLWVSSVDY+ DV IG  VL+Q++D+YRK+R T RYLLGNLHD+  + +
Sbjct: 641 KDEPPYGADILRLWVSSVDYSVDVSIGSNVLKQLADVYRKVRNTSRYLLGNLHDFTPITD 700

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            I  ++LP++D++ L +   ++  +  ++E ++FF+ FQ +Q F +VDLSNFY D+AKDR
Sbjct: 701 GIDIEELPLLDKWMLNRTAEVIDEVTTAFEQFEFFRFFQTLQNFCVVDLSNFYLDIAKDR 760

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY        RRSCQTVL   L  I  +IAP+L H+AED+WQ+LP  Y +ED S    VF
Sbjct: 761 LYVSAANDSRRRSCQTVLHLLLECIASLIAPVLCHMAEDIWQSLP--YPVEDLS----VF 814

Query: 751 ESKWPVLDEKWR 762
              WP +   WR
Sbjct: 815 NRGWPTVPNNWR 826


>gi|302842510|ref|XP_002952798.1| hypothetical protein VOLCADRAFT_93543 [Volvox carteri f.
           nagariensis]
 gi|300261838|gb|EFJ46048.1| hypothetical protein VOLCADRAFT_93543 [Volvox carteri f.
           nagariensis]
          Length = 1034

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 258/492 (52%), Positives = 315/492 (64%), Gaps = 65/492 (13%)

Query: 79  SSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQ 138
           SS+K+  RGP        EG     G Y  TV LP T F +RAN+ +REP+I + W+ H 
Sbjct: 59  SSAKKGKRGP------REEGSDDVSGPYSSTVRLPTTEFSLRANSPIREPQIQQYWEQHA 112

Query: 139 VFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDC 198
            +  + + N GE++ LHDGPPYANG+LH+GHALNKILKD INRY+LLQ  + ++VPGWD 
Sbjct: 113 TYEALVEGNTGESYTLHDGPPYANGDLHIGHALNKILKDFINRYQLLQGRRAKFVPGWDT 172

Query: 199 HGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLT 258
           HGLPIELKVLQSL E  +K+L   +LRAKA +FA  T+ AQ   FKRYGVW DW++PY+T
Sbjct: 173 HGLPIELKVLQSLKEKERKELGVLELRAKAREFALRTIDAQRTQFKRYGVWGDWSSPYVT 232

Query: 259 LDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFR 318
           L+P YEAAQ+ VFG+M L G+IYRG KPVHWSPSSRTALAEAELEYPEGH S ++Y    
Sbjct: 233 LEPSYEAAQLRVFGKMFLNGHIYRGLKPVHWSPSSRTALAEAELEYPEGHRSTAVYVAMP 292

Query: 319 MVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAA 378
           +V+        + + L   G A+WTTTPWT+PAN AVAVN +L Y VVE Q         
Sbjct: 293 LVAVGEKAGEEMKQALQGAGFAIWTTTPWTIPANLAVAVNDQLDYCVVEAQ--------- 343

Query: 379 PANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDN 438
                                   +LV  L  K G +L +  T  GS+LE C Y HP+ +
Sbjct: 344 ------------------------ELVGRLAEKTGVELKVLATAKGSELEGCSYRHPLYD 379

Query: 439 RQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFS 498
           R  P+VIGGDYITTE+GT                          PVDD G FT EAG F+
Sbjct: 380 RTSPLVIGGDYITTETGT--------------------------PVDDAGNFTTEAGPFA 413

Query: 499 GLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQA 558
           GL+V G+GN AVV  L E   L+ +E YEHKYPYDWRTKKPTIFRAT QWFASVEGFR A
Sbjct: 414 GLNVQGEGNKAVVAALREAGVLLKDELYEHKYPYDWRTKKPTIFRATSQWFASVEGFRGA 473

Query: 559 AMDAIGQVKWVP 570
           A++AI  V+W+P
Sbjct: 474 ALEAIRGVQWIP 485



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 105/208 (50%), Positives = 142/208 (68%), Gaps = 7/208 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           ++ P YGADVLRLWV+SVDYT DV IG  +LRQM+D+YRK+RGTLR+LLGNL D+    +
Sbjct: 669 KQQPAYGADVLRLWVASVDYTSDVAIGSSILRQMADMYRKVRGTLRFLLGNLADYDPQVH 728

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           ++ Y+ LP +D+Y LF++  ++  +  +Y+SYQFFK+FQ +QRF+IVDLSNFY D AKDR
Sbjct: 729 AVPYEQLPSLDRYMLFRVSQLMNEVSAAYDSYQFFKVFQSLQRFVIVDLSNFYLDTAKDR 788

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY    +   RR+CQTVL A L S++  +AP++PHLAED W NLP+A        A  VF
Sbjct: 789 LYIRRDSDPARRACQTVLDALLRSLMAALAPLVPHLAEDAWLNLPYA------RPAASVF 842

Query: 751 ESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           ++ W   +  W      E+  W    EV
Sbjct: 843 QAGWVAPEPAWSGLRPEEVAAWSLAGEV 870


>gi|123965505|ref|YP_001010586.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|166229755|sp|A2BUL8.1|SYI_PROM5 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|123199871|gb|ABM71479.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 965

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 250/481 (51%), Positives = 314/481 (65%), Gaps = 33/481 (6%)

Query: 99  EKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGP 158
           +KK +  YK T++L KT F MRAN++ REP+I + W  +++ L +   N GE F LHDGP
Sbjct: 8   DKKSKFSYKETLNLLKTDFSMRANSVSREPQIQEFWLKNKIDLELGSSNLGEKFTLHDGP 67

Query: 159 PYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKD 218
           PYANG+LHMGHALNK+LKDIIN+YK L+ +KV +VPGWDCHGLPIELKVLQSL    +KD
Sbjct: 68  PYANGSLHMGHALNKVLKDIINKYKTLKGFKVHFVPGWDCHGLPIELKVLQSLKSHERKD 127

Query: 219 LTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQG 278
           L    LR KA  +AK  +K Q+  FKR+G+W DW+NPYLTL   YE+AQI VFG+M L G
Sbjct: 128 LDSLGLRKKATDYAKIQIKNQLEGFKRWGIWGDWDNPYLTLKNNYESAQIGVFGKMFLNG 187

Query: 279 YIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPST------SGLLNE 332
           YIYRG KPVHWSPSSRTALAEAELEYPE H S S+Y    + +             L N+
Sbjct: 188 YIYRGLKPVHWSPSSRTALAEAELEYPEEHYSSSVYVSLNISNLSDEILLKLEEKDLKNK 247

Query: 333 FLPDLG---LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNV 389
            L +L    +A+WTTTPWT+P N AVA+N ++ Y   E                      
Sbjct: 248 LLSNLNKLFIAIWTTTPWTIPGNEAVAINPRINYVFAE---------------------- 285

Query: 390 LKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDY 449
             DQ     + A DL+  +  K   +      + GS L    Y HP  N+ C +VIGGDY
Sbjct: 286 --DQNGDIFLFAKDLISEISEKLEREFNTLIDVKGSMLTGIEYKHPTKNKFCNIVIGGDY 343

Query: 450 ITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVA 509
           ITTESGTG+VHTAPGHG +D+    KY LPI   VD++G     A KF GL+VL D N  
Sbjct: 344 ITTESGTGIVHTAPGHGMDDFNVGKKYHLPITCIVDEKGNLNNHAEKFCGLNVLKDANDL 403

Query: 510 VVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
           +++ L +   L+++E Y+H+YPYDWRTKKPTIFRATEQWFASVEGFR +A+ AI  V+W+
Sbjct: 404 IIEDLKKNNLLLLKEKYKHRYPYDWRTKKPTIFRATEQWFASVEGFRSSALKAIEDVEWM 463

Query: 570 P 570
           P
Sbjct: 464 P 464



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 95/188 (50%), Positives = 133/188 (70%), Gaps = 7/188 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGN+HD+  +   I 
Sbjct: 648 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPIDEEID 707

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            D LP++DQ+ L +L ++   I  +YE+Y+F K FQI+Q F +VDLSNFY D+AKDRLY 
Sbjct: 708 IDQLPILDQWMLNRLVDVSDQITIAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYV 767

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
              +S  RR+CQ V+S  + ++  +I+P+L H+AED+WQN+P++      +  + VFE  
Sbjct: 768 SAKSSIRRRTCQFVMSKIVENLAVLISPVLCHMAEDIWQNIPYS------TNEKSVFERG 821

Query: 754 WPVLDEKW 761
           WP L + W
Sbjct: 822 WPNLPKSW 829


>gi|159481678|ref|XP_001698905.1| isoleucyl-tRNA synthetase [Chlamydomonas reinhardtii]
 gi|158273397|gb|EDO99187.1| isoleucyl-tRNA synthetase [Chlamydomonas reinhardtii]
          Length = 902

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 255/429 (59%), Positives = 304/429 (70%), Gaps = 9/429 (2%)

Query: 150 ENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQ 209
           E + LHDGPPYANG+LH+GHALNKILKD INRY+LLQ  + ++VPGWD HGLPIELKVLQ
Sbjct: 1   EPYTLHDGPPYANGDLHIGHALNKILKDFINRYQLLQGRRAKFVPGWDTHGLPIELKVLQ 60

Query: 210 SLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIE 269
           SL +  +K L   +LRAKA +FA  T+ AQ   FKRYGVWADW  PY+TL+P YEAAQ++
Sbjct: 61  SLPDKERKSLGVLELRAKAREFALKTIDAQRQQFKRYGVWADWAAPYVTLEPAYEAAQLQ 120

Query: 270 VFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL 329
           VFG+M   G+IYRG KPVHWSPSSRTALAEAELEYPEGH S S+Y    M +AP   +  
Sbjct: 121 VFGKMYTNGHIYRGLKPVHWSPSSRTALAEAELEYPEGHKSTSVYVALPM-TAPGHKAAA 179

Query: 330 ---LNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRP 386
              L E L     A+WTTTPWT+PAN AVA+N +L Y VVE+Q+    +    A      
Sbjct: 180 NPQLAEALQGSAFAIWTTTPWTIPANLAVALNDQLDYCVVEVQAAEGAEGEEGAEGAEAA 239

Query: 387 GNVLKDQKKVF----IIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCP 442
                     +    ++VA +LV  L  K G +  +  T+ GS+LE C Y HP+ +R  P
Sbjct: 240 AAAAAAAAAGWAVRRLVVAKELVGRLGEKTGARFQVLTTVKGSELEGCTYKHPLYDRVSP 299

Query: 443 VVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLD 501
           VVIGGDYITTE+GTGLVHTAPGHGQEDY+   + GLP+LSPVDD G FT EAG+ F+GL 
Sbjct: 300 VVIGGDYITTETGTGLVHTAPGHGQEDYLVGQRCGLPLLSPVDDAGCFTAEAGEAFAGLA 359

Query: 502 VLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMD 561
           V G+GN AV   L E   L+ EE YEHKYPYDWRTKKPTIFRAT QWFASVEGFR +A++
Sbjct: 360 VQGEGNRAVCAALREAGVLLKEELYEHKYPYDWRTKKPTIFRATSQWFASVEGFRGSALE 419

Query: 562 AIGQVKWVP 570
           AI  V WVP
Sbjct: 420 AIRGVGWVP 428



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/206 (40%), Positives = 115/206 (55%), Gaps = 21/206 (10%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P YGADVLRLWV+SVDYT DV IG  +L+QM+D+YRK+RGTLR+LLGNL D+    +++ 
Sbjct: 599 PAYGADVLRLWVASVDYTSDVAIGGAILKQMADMYRKVRGTLRFLLGNLSDYDPAAHAVP 658

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
           Y  LP +D+Y L +L  ++  +  +Y++YQ     Q   R           D A      
Sbjct: 659 YAQLPGLDRYLLSRLHAVLTEVAAAYDNYQVGGAVQWAGRGGGGAGLGGPDDPA------ 712

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RR+CQTVL A L  ++  +AP++PH+AED W NLP+A        A  VF++ 
Sbjct: 713 -------RRACQTVLDALLRGLLAALAPLVPHMAEDAWLNLPYA------RPAGSVFQAG 759

Query: 754 WPVLDEKWRT-FPVGEIYFWGKILEV 778
           W   D  W       +   W  +LEV
Sbjct: 760 WARPDPAWAAGLSEQQAAGWAVLLEV 785


>gi|254526098|ref|ZP_05138150.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537522|gb|EEE39975.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 965

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 253/489 (51%), Positives = 322/489 (65%), Gaps = 37/489 (7%)

Query: 93  KKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF 152
           K     E+K E  YK T++L KT F MRAN+++REPEI   W  + +   +   N G+ F
Sbjct: 2   KSQNSKEQKSEFSYKETLNLLKTDFSMRANSVLREPEIQDFWAKNNIDFELGLNNSGKTF 61

Query: 153 VLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD 212
            LHDGPPYANG+LHMGHALNK+LKDIIN+YK L+ +KV YVPGWDCHGLPIELKVLQ+L 
Sbjct: 62  TLHDGPPYANGSLHMGHALNKVLKDIINKYKTLKGFKVHYVPGWDCHGLPIELKVLQNLK 121

Query: 213 EDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFG 272
            D +K+L    LR KA  +A   +  QM  FKR+G+W DW+NPYLTL   YE+AQI VFG
Sbjct: 122 SDERKNLNSLSLRKKATDYAHKQINNQMEGFKRWGIWGDWDNPYLTLKKSYESAQIGVFG 181

Query: 273 QMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLL-- 330
           +M L GYIYRG KPVHWSPSSRTALAEAELEYP+ H S+SIY   ++   P     LL  
Sbjct: 182 KMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPDDHYSKSIYVSLKITKVPDKV--LLKG 239

Query: 331 ---------NEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPAN 381
                    N FL +  + +WTTTPWT+PAN AVAVN K+ Y                  
Sbjct: 240 CQENPNIKKNSFLSNSFITIWTTTPWTIPANEAVAVNPKISYVF---------------- 283

Query: 382 KKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQC 441
                  V+ + K++F+  A +L   +  K+     I   + GS LEN  Y HP  N+ C
Sbjct: 284 -------VIDEDKRIFLF-AKNLFSEISEKFNKIFNILFEVKGSSLENIEYHHPTKNKNC 335

Query: 442 PVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLD 501
            +VIGGD+ITTESGTG+VHTAPGHG +D+    KY LPI   VD++G   E +G+F G +
Sbjct: 336 RIVIGGDFITTESGTGIVHTAPGHGIDDFNVGQKYDLPITCVVDEKGNLNEYSGQFKGSN 395

Query: 502 VLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMD 561
           VL D N  +++YL  +  L+++E Y+H+YPYDWRTKKPTIFRATEQWFAS++GFR +A+ 
Sbjct: 396 VLKDANDLIIEYLKGKNLLLLQENYKHRYPYDWRTKKPTIFRATEQWFASLDGFRSSALK 455

Query: 562 AIGQVKWVP 570
           AI  V+W+P
Sbjct: 456 AIEDVEWMP 464



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 94/193 (48%), Positives = 133/193 (68%), Gaps = 7/193 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           +  P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGN+HD+    +
Sbjct: 645 KSEPAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPNID 704

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           S   D LP++DQ+ L +L  +   I  +YESY+F + FQI+Q F +VDLSNFY D+AKDR
Sbjct: 705 SFEIDQLPLLDQWMLGRLVEVSSQISHAYESYEFSRFFQILQSFCVVDLSNFYLDIAKDR 764

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY    + F RRSCQ V+S  + ++  +I+P+L H+AED+WQN+P+       +  + VF
Sbjct: 765 LYVSAKSQFRRRSCQFVMSKVVENLAVLISPVLCHMAEDIWQNIPYL------TKEKSVF 818

Query: 751 ESKWPVLDEKWRT 763
           +  WP+  + W+ 
Sbjct: 819 QRGWPIFSQSWKN 831


>gi|123967796|ref|YP_001008654.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|166229756|sp|A2BP36.1|SYI_PROMS RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|123197906|gb|ABM69547.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 968

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 253/489 (51%), Positives = 321/489 (65%), Gaps = 37/489 (7%)

Query: 93  KKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF 152
           K     E+K +  YK T++L KT F MRAN++VREPEI   W  + +  ++   N GE F
Sbjct: 2   KSQNSKEQKSDFSYKETLNLLKTDFSMRANSVVREPEIQNFWAKNNIDFKLGSNNSGEIF 61

Query: 153 VLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD 212
            LHDGPPYANG LHMGHALNK+LKDIIN+YK L+ ++V YVPGWDCHGLPIELKVLQ+L 
Sbjct: 62  TLHDGPPYANGALHMGHALNKVLKDIINKYKTLRGFRVHYVPGWDCHGLPIELKVLQNLK 121

Query: 213 EDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFG 272
            D +K+L    LR KA  +A   +  QM  FKR+G+W DW+NPYLTL   YE+AQI VFG
Sbjct: 122 SDERKNLDTLNLRKKATDYAHIQINNQMEGFKRWGIWGDWDNPYLTLKKSYESAQIGVFG 181

Query: 273 QMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE 332
           +M L GYIYRG KPVHWSPSSRTALAEAELEYP+ H S+SIY   ++     S   LLN 
Sbjct: 182 KMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPDEHYSKSIYISLKITKI--SEEILLNF 239

Query: 333 FLPDLGL-----------AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPAN 381
              +L +            +WTTTPWT+PAN AVAVN K++Y                  
Sbjct: 240 VQENLNIKREFFENNSFITIWTTTPWTIPANEAVAVNPKIKYVF---------------- 283

Query: 382 KKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQC 441
                   + ++K++++  A DL   +  K+   L +   + GS LEN  Y HP  N+ C
Sbjct: 284 -------AIDEEKRIYLF-AKDLSTEISNKFNKDLKVLLEVKGSQLENIEYQHPSKNKNC 335

Query: 442 PVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLD 501
            +VIGGDYITTESGTG+VHTAPGHG +D+    KY LPI   VD++G   E +G+F G +
Sbjct: 336 RIVIGGDYITTESGTGIVHTAPGHGVDDFNVGQKYDLPITCVVDEKGNLNEYSGQFQGSN 395

Query: 502 VLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMD 561
           VL D N  +++YL     L+++E Y+H+YPYDWRTKKPTIFRATEQWFASV GFR +A+ 
Sbjct: 396 VLKDANDLIIEYLKGNNLLLLQENYKHRYPYDWRTKKPTIFRATEQWFASVNGFRSSALQ 455

Query: 562 AIGQVKWVP 570
           AI  V+W+P
Sbjct: 456 AIEDVEWMP 464



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 94/195 (48%), Positives = 134/195 (68%), Gaps = 7/195 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 633
           P YGADVLRLWVSSVDY+ DV IG  +L+Q++D+YRK+R T RYLLGN+HD+    +S  
Sbjct: 648 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLADVYRKVRNTARYLLGNIHDYDPNIDSYE 707

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            D LP++DQ+ L +L  +   I  +YE+Y+F K FQI+Q F +VDLSNFY D+AKDRLY 
Sbjct: 708 IDQLPLLDQWMLGRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYV 767

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
              + F RRSCQ V+S  + ++  +I+P+L H+AED+WQN+P+       +  + VF+  
Sbjct: 768 SSKSQFRRRSCQFVMSKVVENLAVLISPVLCHMAEDIWQNIPYL------TKEKSVFQRG 821

Query: 754 WPVLDEKWRTFPVGE 768
           WP+  + W+   + E
Sbjct: 822 WPIFAQSWKNQILNE 836


>gi|157412597|ref|YP_001483463.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166980057|sp|A8G2P6.1|SYI_PROM2 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|157387172|gb|ABV49877.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 965

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 253/489 (51%), Positives = 320/489 (65%), Gaps = 37/489 (7%)

Query: 93  KKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF 152
           K     E+K E  YK T++L KT F MRAN+++REPEI   W  + +   +   N G+ F
Sbjct: 2   KSQNSKEQKSEFSYKETLNLLKTDFSMRANSVLREPEIQDFWAKNNIDFELGLNNSGKTF 61

Query: 153 VLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD 212
            LHDGPPYANG+LHMGHALNK+LKDIIN+YK L+ +KV YVPGWDCHGLPIELKVLQ+L 
Sbjct: 62  TLHDGPPYANGSLHMGHALNKVLKDIINKYKTLKGFKVHYVPGWDCHGLPIELKVLQNLK 121

Query: 213 EDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFG 272
              +K+L    LR KA  +A   +  QM  FKR+G+W DW+NPYLTL   YE+AQI VFG
Sbjct: 122 SHERKNLNSLSLRKKATDYAHKQINNQMEGFKRWGIWGDWDNPYLTLKKSYESAQIGVFG 181

Query: 273 QMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLN- 331
           +M L GYIYRG KPVHWSPSSRTALAEAELEYP+ H S+SIY   ++   P     LL  
Sbjct: 182 KMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPDDHYSKSIYVSLKITKVPDKV--LLKG 239

Query: 332 ----------EFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPAN 381
                      FL +  + +WTTTPWT+PAN AVAVN K+ Y                  
Sbjct: 240 CQENPNIKKESFLGNSFITIWTTTPWTIPANEAVAVNPKISYVF---------------- 283

Query: 382 KKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQC 441
                  V+ + K++F+  A +L   +  K+     I   + GS LEN  Y HP  N+ C
Sbjct: 284 -------VIDEDKRIFLF-AKNLFSEISEKFNKIFKILFEVKGSSLENIEYQHPTKNKNC 335

Query: 442 PVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLD 501
            +VIGGDYITTESGTG+VHTAPGHG +D+    KY LPI   VD++G   E +G+F G +
Sbjct: 336 RIVIGGDYITTESGTGIVHTAPGHGIDDFNVGQKYDLPITCVVDEKGNLNEYSGQFKGSN 395

Query: 502 VLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMD 561
           VL D N  +++YL  +  L+++E Y+H+YPYDWRTKKPTIFRATEQWFASV+GFR +A+ 
Sbjct: 396 VLKDSNDLIIEYLKGKNLLLLQENYKHRYPYDWRTKKPTIFRATEQWFASVDGFRSSALK 455

Query: 562 AIGQVKWVP 570
           AI  V+W+P
Sbjct: 456 AIEDVEWMP 464



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 94/193 (48%), Positives = 133/193 (68%), Gaps = 7/193 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           +  P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGN+HD+    +
Sbjct: 645 KSEPAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPNID 704

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           S   D LP++DQ+ L +L  +   I  +YESY+F + FQI+Q F +VDLSNFY D+AKDR
Sbjct: 705 SFEIDQLPLLDQWMLGRLVEVSSQISHAYESYEFSRFFQILQSFCVVDLSNFYLDIAKDR 764

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY    + F RRSCQ V+S  + ++  +I+P+L H+AED+WQN+P+       +  + VF
Sbjct: 765 LYVSAKSQFRRRSCQFVMSKVVENLAVLISPVLCHMAEDIWQNIPYL------TKEKSVF 818

Query: 751 ESKWPVLDEKWRT 763
           +  WP+  + W+ 
Sbjct: 819 QRGWPIFSQSWKN 831


>gi|126695598|ref|YP_001090484.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166229753|sp|A3PAV8.1|SYI_PROM0 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|126542641|gb|ABO16883.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 968

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 247/487 (50%), Positives = 317/487 (65%), Gaps = 33/487 (6%)

Query: 93  KKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF 152
           K     E+K +  YK T++L KT F MRAN+++REPEI   W ++ +  ++   N GE F
Sbjct: 2   KSQNSKEQKSDFSYKETLNLLKTDFSMRANSVLREPEIQNFWANNDIDFQLGSSNSGEIF 61

Query: 153 VLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD 212
            LHDGPPYANG LHMGHALNK+LKDIIN+YK L+ ++V +VPGWDCHGLPIELKVLQ+L 
Sbjct: 62  TLHDGPPYANGALHMGHALNKVLKDIINKYKTLKGFRVHFVPGWDCHGLPIELKVLQNLK 121

Query: 213 EDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFG 272
            D +K+L    LR KA  +A   +  Q   FKR+G+W DWNNPYLTL   YE+AQI VFG
Sbjct: 122 SDERKNLDTLNLRKKATDYAHIQINNQKEGFKRWGIWGDWNNPYLTLKKSYESAQIGVFG 181

Query: 273 QMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTS----- 327
           +M L GYIYRG KPVHWSPSSRTALAEAELEYP+ H S+SIY   ++   P         
Sbjct: 182 KMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPDDHYSKSIYVSLKITKIPEEIQLNFIQ 241

Query: 328 ---GLLNEFLPDLGL-AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKK 383
               +  +F  +     +WTTTPWT+PAN AVAVN K+ Y                    
Sbjct: 242 KNINIKKDFFQNNSFITIWTTTPWTIPANEAVAVNPKINYIF------------------ 283

Query: 384 SRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPV 443
                 + ++K++++  A DL   +  K+     +   + GS LEN  Y HP  N+ C +
Sbjct: 284 -----AIDEEKRIYLF-AKDLCSEISKKFNKDFKVLLEVKGSKLENIEYQHPSKNKNCRI 337

Query: 444 VIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVL 503
           VIGGDYITTESGTG+VHTAPGHG +D+    KY LPI   VD++G   E +G+F G +VL
Sbjct: 338 VIGGDYITTESGTGIVHTAPGHGIDDFNVGQKYDLPITCVVDEKGNLNEYSGQFKGSNVL 397

Query: 504 GDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
            D N  +++YL     L+++E Y+H+YPYDWRTKKPTIFRATEQWFASV GFR +A+ AI
Sbjct: 398 KDANDLIIEYLKVNNLLLLQENYKHRYPYDWRTKKPTIFRATEQWFASVNGFRSSALKAI 457

Query: 564 GQVKWVP 570
             V+W+P
Sbjct: 458 EDVEWMP 464



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 95/195 (48%), Positives = 135/195 (69%), Gaps = 7/195 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 633
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGN+HD+    +S  
Sbjct: 648 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPKIDSFE 707

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            D LP++DQ+ L +L  +   I  +YE+Y+F K FQI+Q F +VDLSNFY D+AKDRLY 
Sbjct: 708 IDQLPLLDQWMLGRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYV 767

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
              + F RRSCQ V+S  + ++  +I+P+L H+AED+WQN+P++      +  + VF+  
Sbjct: 768 SSKSQFRRRSCQFVMSKVVENLAVLISPVLCHMAEDIWQNIPYS------TKEKSVFQRG 821

Query: 754 WPVLDEKWRTFPVGE 768
           WP+  + W+   + E
Sbjct: 822 WPIFSQSWKNKILNE 836


>gi|452820529|gb|EME27570.1| isoleucyl-tRNA synthetase [Galdieria sulphuraria]
          Length = 1039

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 242/472 (51%), Positives = 324/472 (68%), Gaps = 33/472 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK++++LPKT F  RANA V+E EI K W+DH ++ +V + N  + FVLHDGPPYANG L
Sbjct: 77  YKNSINLPKTRFEQRANAAVKELEIQKFWEDHLIYEKVLEANQHKTFVLHDGPPYANGTL 136

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDII RY LL+ +   ++PGWDCHGLPIELKV QS+ ++    ++  +LR
Sbjct: 137 HVGHALNKILKDIICRYHLLRGFYACFIPGWDCHGLPIELKVWQSIPKENHDKVSVIELR 196

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            +AA+FA+ T++ Q +SFKR+G+W  W+ PYLT+ PEYEAAQI+VFG++ L+G+IYR +K
Sbjct: 197 RRAAEFARNTIEEQKSSFKRFGIWGFWSRPYLTMSPEYEAAQIQVFGELFLRGFIYRARK 256

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PVHWSPSS+TALAEAELEY E H+S +IY  FR ++   S  G L      L L +WTTT
Sbjct: 257 PVHWSPSSKTALAEAELEYSEDHISTAIYVSFR-IAHVNSLLGDLPISSNSLELVIWTTT 315

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN AVAVN  + Y+++E+  L                         F+IVA D +
Sbjct: 316 PWTLPANEAVAVNPHMTYSLIEVARL-----------------------NRFLIVAKDCL 352

Query: 406 P----TLEAKW-GTKLVIKKTLAGSDLENCRYVHP-VDNRQCPVVIGGDYITTESGTGLV 459
                 L+ +W   + V++ T  G  L   +Y HP + ++ C VV GG+YIT+ESGTGLV
Sbjct: 353 KRVREKLKLEWQDCRQVLEWT--GESLVGIKYYHPIIKDKICRVVRGGNYITSESGTGLV 410

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQM 518
           HTAPGHG+ED+V   +  LPI  PVD+ G FT+EAG+   G  VLG GN  V++ ++   
Sbjct: 411 HTAPGHGEEDFVVGKRENLPISCPVDENGMFTKEAGEVLFGHSVLGQGNKLVLELVENMN 470

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            L+ +E Y HKYPYDWRTK+PTI+R TEQWFAS+E FR+  +D+I QV W+P
Sbjct: 471 LLLAKECYRHKYPYDWRTKEPTIYRTTEQWFASLENFRKEVLDSIDQVTWIP 522



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 91/184 (49%), Positives = 124/184 (67%), Gaps = 6/184 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-N 630
           ++ P YGADVLRLWV+SVDY  +V+IGPQ++RQ++DIYRK+R TLR+++GNL+D+R   N
Sbjct: 701 KKDPAYGADVLRLWVASVDYRNEVLIGPQIIRQVADIYRKIRNTLRFMVGNLYDFRKDVN 760

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           +I   +LP +D Y L       K++  +YE Y F  I+Q IQR  I +LSNFY D++KDR
Sbjct: 761 AIPLAELPQLDIYMLTVFNKFKKSVESAYERYDFTSIYQAIQRLCITELSNFYLDISKDR 820

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           LY      + RRSCQTVL   L  +VR++AP++PH AED+WQ   F        A   VF
Sbjct: 821 LYVSLPDDYRRRSCQTVLHMILEDLVRIVAPLIPHTAEDLWQCFEFR-----RDACLSVF 875

Query: 751 ESKW 754
           +S W
Sbjct: 876 QSGW 879


>gi|78778625|ref|YP_396737.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|123554705|sp|Q31CU4.1|SYI_PROM9 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|78712124|gb|ABB49301.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 968

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 236/487 (48%), Positives = 308/487 (63%), Gaps = 33/487 (6%)

Query: 93  KKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF 152
           K     E K E  YK T++L KT F MRAN+++REPEI   W  + +   +   N G+ F
Sbjct: 2   KSQNNKEYKSEFSYKETLNLLKTDFSMRANSVLREPEIQNFWAKNNIDFELGSNNSGKIF 61

Query: 153 VLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD 212
            LHDGPPYANG LHMGHALNK+LKDIIN+YK L+ ++V YVPGWDCHGLPIELKVLQ+L 
Sbjct: 62  TLHDGPPYANGALHMGHALNKVLKDIINKYKTLRGFRVHYVPGWDCHGLPIELKVLQNLK 121

Query: 213 EDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFG 272
              +K+L    LR KA  +A   +  QM  FKR+G+W +W+NPYLTL   YE+AQI VFG
Sbjct: 122 SSERKNLDTLNLRKKATDYAYVQINNQMEGFKRWGIWGNWDNPYLTLKKSYESAQIGVFG 181

Query: 273 QMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE 332
           +M L GYIYRG KPVHWSPSSRTALAEAELEYP+ H S+SIY   ++            +
Sbjct: 182 KMFLNGYIYRGLKPVHWSPSSRTALAEAELEYPDEHYSKSIYVSLKITKLSDEILLKFYQ 241

Query: 333 FLPDLGLAVWTTTPW---------TVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKK 383
             P+     + +  +         T+PAN AVAVN K+ Y                    
Sbjct: 242 ENPNFKKDFFLSNSFITIWTTTPWTIPANEAVAVNPKINYVF------------------ 283

Query: 384 SRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPV 443
                 + ++K+++++ A +L   +  K+   L     + G  LE+  Y HP  N+ C +
Sbjct: 284 -----AIDEEKRIYLL-AKELSSEISNKFNKDLTTLLEVKGVTLEDIEYQHPTKNKNCRI 337

Query: 444 VIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVL 503
           VIGGDYIT ESGTG+VHTAPGHG +D+    KY LP    VD++G   E +G+F G +VL
Sbjct: 338 VIGGDYITIESGTGIVHTAPGHGIDDFNVGRKYDLPTTCVVDEKGNLNEYSGQFQGSNVL 397

Query: 504 GDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
            D N  ++ YL+E+  L+++E Y+H+YPYDWRTKKPTIFRATEQWFASV GFR +A+ AI
Sbjct: 398 KDANDLIIDYLEEKDLLLLQENYKHRYPYDWRTKKPTIFRATEQWFASVNGFRSSALKAI 457

Query: 564 GQVKWVP 570
             V+W+P
Sbjct: 458 EDVEWIP 464



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 95/195 (48%), Positives = 134/195 (68%), Gaps = 7/195 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 633
           P YGADVLRLWVSSVDY+ DV IG  +L+Q+SD+YRK+R T RYLLGN+HD+    +S  
Sbjct: 648 PAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTARYLLGNIHDYDPNIDSFE 707

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            D LP++DQ+ L +L  +   I  +YE+Y+F K FQI+Q F +VDLSNFY D+AKDRLY 
Sbjct: 708 IDQLPLLDQWMLGRLVEVTDQISNAYENYEFSKFFQILQSFCVVDLSNFYLDIAKDRLYV 767

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
              + F RRSCQ V+S  + ++  +I+P+L H+AED+WQN+P++      +  + VF+  
Sbjct: 768 SSKSQFRRRSCQFVMSKVVENLAVLISPVLCHMAEDIWQNVPYS------TKEKSVFQRG 821

Query: 754 WPVLDEKWRTFPVGE 768
           WP   + W+   + E
Sbjct: 822 WPNFSQSWKNEILNE 836


>gi|395836198|ref|XP_003791049.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Otolemur
           garnettii]
          Length = 801

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 266/664 (40%), Positives = 370/664 (55%), Gaps = 66/664 (9%)

Query: 104 GRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           G+Y+ TV LP+T+F M+     +   E EI +     +++    ++     F LHDGPPY
Sbjct: 58  GKYRDTVLLPQTSFPMKLLGRQQPETELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NRY ++   KV +VPGWDCHGLPIE+KVL  L   A+  L+
Sbjct: 118 ANGDPHVGHALNKILKDIANRYHMMNGSKVHFVPGWDCHGLPIEIKVLSELGSKAQ-SLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             +LR KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+ +F QM  +G +
Sbjct: 177 AVELREKARSFAKAAIEKQKSAFMRWGIMADWNNCYYTFDAKYEAKQLRIFYQMYDKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV WSPSSRTALAEAELEY   HVSRS+Y  F ++   P  + LL+   P + + 
Sbjct: 237 YRSYKPVFWSPSSRTALAEAELEYNPEHVSRSVYVKFPLLKPSPKLASLLDSSSP-VNIL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN AV    + +YAVV+  S   GD                       I+
Sbjct: 296 VWTTQPWTIPANQAVCYMPQSKYAVVKCTS--SGD---------------------LYIL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A+D V ++ +   T      T +G DLE+    HP+   +   ++  +++T   GTGLVH
Sbjct: 333 AADKVTSVASALETTFETVSTFSGVDLEDGTCSHPLIPDKVSPLLPANHVTMAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + +Y L     VD++G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYSVASQYNLSTDCLVDEDGIFTDVAGPELQNKAVLEEGTDVVIKMLQTAKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGA 579
            + EE   H YPYDWRTKKP I RA++QWF ++   +  A + + +VK++P         
Sbjct: 453 FLKEEKVVHSYPYDWRTKKPVIIRASKQWFVNITDIKTTAKELLKKVKFIP--------G 504

Query: 580 DVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSISYDDLP 638
             L   V  +D                      R TLR+LLGN+ D+    +SI   ++ 
Sbjct: 505 SSLNAMVEMID----------------------RNTLRFLLGNVTDFNPETDSIPVKNMY 542

Query: 639 MIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTS 698
           +IDQY L  L+++   + ESY  Y F K+ ++++ F   +LSNFYF + KDRLY      
Sbjct: 543 VIDQYMLHLLQDLANKVTESYRRYDFGKVVRLLRAFYTRELSNFYFSIIKDRLYCENEND 602

Query: 699 FTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLD 758
             RRSCQT L   L  +VR  APILPHLAE+V+Q++P           + VF + W    
Sbjct: 603 PKRRSCQTALVEILDVVVRSFAPILPHLAEEVFQHMPHV------KEPKSVFRTGWISRS 656

Query: 759 EKWR 762
             W+
Sbjct: 657 SIWK 660


>gi|328875644|gb|EGG24008.1| isoleucyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 1038

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 230/527 (43%), Positives = 326/527 (61%), Gaps = 43/527 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN--DGENFVLHDGPPYANG 163
           Y  T++LPKT+F M+ANA  REP + K  D +Q++      N   G+ +V HDGPPYANG
Sbjct: 72  YSATLNLPKTSFSMKANAQQREPTLLK--DAYQLYKWQETNNVEGGKTWVFHDGPPYANG 129

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           +LH+GHALNKILKDI NRYK+L+ ++V Y+PGWDCHGLPIE K  +S+  +    +TP +
Sbjct: 130 DLHLGHALNKILKDITNRYKMLRGHRVNYIPGWDCHGLPIESKAFESIRREKSDRMTPVE 189

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
           +R  A  +A+  ++ QMASF+ +G+  DW  PY+T+ P+YE AQ+E F  M  +GY+YRG
Sbjct: 190 IRKTAKAYAEKEIRKQMASFRSWGIMGDWEAPYITMAPDYEVAQLETFYDMYKRGYVYRG 249

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPVHWSPSSRTALA+AELEY + HVS+SI+  F +  +  +           +   +WT
Sbjct: 250 IKPVHWSPSSRTALADAELEYNDNHVSQSIFVKFAVTQSSNAHILAAMSRGDKVHAVIWT 309

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+ VNA+L+Y++V               K  +  N L       +IV+S+
Sbjct: 310 TTPWTIPANQAICVNAQLEYSLV---------------KHDKIDNHL-------LIVSSE 347

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
            + +L + +G  L +  T  G+ LE  + VHP  NR  PV++ GD++   SG+GLVHTAP
Sbjct: 348 RLASLRSAFGLDLEVVATFTGAQLEGTQTVHPQYNRPSPVLL-GDHVVAGSGSGLVHTAP 406

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           GHG ED+    ++ + +LSPVDDEG+FT+E G KF G++VLG GN AV++ L +   L+ 
Sbjct: 407 GHGMEDFAICAQHNIAVLSPVDDEGRFTKEVGDKFVGMEVLGGGNTAVIEDLSQLGCLLH 466

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADV- 581
           +E Y HKYPYDWRTKKP + R T QWF  +    Q+A+ AI  V  VPP  +    + V 
Sbjct: 467 QEKYTHKYPYDWRTKKPILIRTTRQWFVDLTDVHQSAIQAINAVNMVPPSGSNRLSSMVG 526

Query: 582 ---------LRLW-----VSSVDYTGDVMIGPQVLRQMSDIYRKLRG 614
                     R W     V     TG+ +I  + ++ + +++RK  G
Sbjct: 527 RRSDWCISRQRFWGVPIPVFYEKETGEALINDETIQHILEVFRKHGG 573



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 117/191 (61%), Gaps = 9/191 (4%)

Query: 573 EAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NS 631
           E P YG D+LR+WV+S DY+ D+ IGP +L ++ +  +K+R T++++LG+  D+    N 
Sbjct: 700 ENPAYGVDMLRMWVASSDYSRDISIGPNILIKLLENIKKIRNTVKFMLGSNFDFNPELNQ 759

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           I Y+ L  +D++AL ++  + +N  + Y+ +Q+ K  Q +  F + ++S+FYFDV K RL
Sbjct: 760 IDYNQLSDLDKFALHKVFLLEQNASKYYDQFQYSKAMQELNIF-VNEISSFYFDVIKQRL 818

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIV-RVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           Y     +  RRS QTVL  H+L +V +++AP+  H +ED++ N  F Y     S  E VF
Sbjct: 819 YVESKDNILRRSSQTVL-FHMLDVVNKILAPVTVHTSEDIY-NHQFKYR----SPKESVF 872

Query: 751 ESKWPVLDEKW 761
              W   +E+W
Sbjct: 873 TQGWCKFEEQW 883


>gi|281208129|gb|EFA82307.1| isoleucyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 993

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/492 (45%), Positives = 304/492 (61%), Gaps = 34/492 (6%)

Query: 83  RRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLR 142
           R   G V     +   +K     Y  T++LPKT+F M+ANA  RE  + K  D  +++  
Sbjct: 13  RLCSGNVYNYCTSTTTQKDNNHSYSDTLNLPKTSFSMKANAATREHTLLK--DVSELYKW 70

Query: 143 VADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLP 202
             + N GE ++ HDGPPYANG+LH+GHALNK LKD +NRYK+L+ YKV Y+PGWDCHGLP
Sbjct: 71  QENNNTGEKWIFHDGPPYANGDLHLGHALNKTLKDFVNRYKILRGYKVNYIPGWDCHGLP 130

Query: 203 IELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPE 262
           IE+K  +S  +D +  L P  +R  A  FAK  +K Q+ SFK +G+  DW+N Y T++P 
Sbjct: 131 IEVKAFESFKKD-RSLLKPKDVRKVATDFAKKELKKQLDSFKAWGIVGDWDNHYRTMEPG 189

Query: 263 YEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSA 322
           YE +Q+E F +M L+GYIYRG KPVHWSPSS+TALA+AELEY E HVS+SI+  F M   
Sbjct: 190 YEVSQLETFYEMFLKGYIYRGVKPVHWSPSSKTALADAELEYNEQHVSKSIFLKFAMKKV 249

Query: 323 PPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANK 382
              +SGL       L   +WTTTPWT+PAN A+ VNA L Y VVE               
Sbjct: 250 ---SSGLQRFDNGKLNAVIWTTTPWTIPANLAICVNAGLDYVVVE--------------- 291

Query: 383 KSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVI---KKTLAGSDLENCRYVHPVDNR 439
                   +D ++  I  + + + +L  ++   L I    + + G+DL      HP+  R
Sbjct: 292 -------GRDNERYLI--SRERLESLREQFKLPLPIVEGAEAIKGADLFGTVTAHPMYGR 342

Query: 440 QCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSG 499
             P+++G +++ T SGTGLVHTAPGHG ED+    ++ +  +SPVDD G FTE+ G+F+G
Sbjct: 343 DSPILLG-EHVVTGSGTGLVHTAPGHGVEDFAICQQHKIEPISPVDDNGCFTEQVGRFAG 401

Query: 500 LDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAA 559
           L+VLG GN AV++ L    S++  E Y HKYPYDWRTKKPTI R T QWF  + G +  A
Sbjct: 402 LEVLGAGNDAVIEELKSLNSVVHSENYVHKYPYDWRTKKPTIIRTTRQWFVDLSGVQSLA 461

Query: 560 MDAIGQVKWVPP 571
           + +I  +  VPP
Sbjct: 462 VKSIENINMVPP 473



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 117/207 (56%), Gaps = 9/207 (4%)

Query: 573 EAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNS 631
           E P YG D+LR+W+++ DYT D+ +GP +L ++ D  +K+R T+RY+LG   D++   +S
Sbjct: 656 ENPAYGVDMLRMWIATSDYTKDISVGPTILTKVLDNVKKIRNTVRYMLGANFDFQPEKHS 715

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + Y  L  ID+YAL ++  + +N  + Y+ + F K+ Q +  F   ++S FYFD+ K RL
Sbjct: 716 VPYHQLSEIDKYALHKVYVLSENATKYYDQFHFQKVTQEVINF-CHEISAFYFDIIKQRL 774

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           Y     +  RRS QTVL   L  + ++IAPI  H  ED++++  + Y        E VF 
Sbjct: 775 YVEAPDNNLRRSSQTVLFEMLDVVNKIIAPIAIHTCEDIYKH-QYKYR----EPTESVFT 829

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEV 778
             W  +  +W    +  +  WG I+ V
Sbjct: 830 QGWTRVKPEWNNAQL--LDQWGCIITV 854


>gi|310778463|ref|YP_003966796.1| isoleucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747786|gb|ADO82448.1| Isoleucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 931

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/473 (47%), Positives = 302/473 (63%), Gaps = 40/473 (8%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           +E  Y  T++LPKT+F MRAN   +EP I K WD  +++ +  +  + + F+LHDGPPYA
Sbjct: 3   DERDYGKTLNLPKTSFQMRANLPNKEPLILKQWDKDKIYKKSLEGKE-KQFILHDGPPYA 61

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGN+H+GHALNKILKDII +YK LQ Y   Y+PGWD HGLPIELKV + L E A KD++P
Sbjct: 62  NGNIHIGHALNKILKDIILKYKRLQGYNAPYIPGWDTHGLPIELKVTEELGE-AAKDMSP 120

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            K+R K  K+AK  V+ Q + F R GV  DW+NPYLTL+PEYEA Q+EVF ++   GYI+
Sbjct: 121 LKIRDKCTKYAKKWVQKQKSDFIRLGVMGDWDNPYLTLNPEYEAKQLEVFKELYENGYIF 180

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF-LPDLGLA 340
           +G KP++WSP++ TALAEAE+EY + HVS SIY          + S LL +  L +  L 
Sbjct: 181 KGLKPIYWSPATETALAEAEIEY-KNHVSPSIYVKME------ANSDLLEKLGLDEASLV 233

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN A+ +NA+ +Y V                 K+  GN         +I+
Sbjct: 234 IWTTTPWTIPANVAICLNAEFEYGVY----------------KTEKGN---------LIL 268

Query: 401 ASDLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           A  L     A  G + V + K   G  LE   Y HP  +R   VVI G+++T E+GTG V
Sbjct: 269 AKGLSEKAFADMGIENVELLKEFTGDKLERTTYKHPFLDR-TGVVILGEHVTMEAGTGCV 327

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHGQ+DYV   +YGLP++SP++++G  TEEAGKF+G+      N  +  ++DE   
Sbjct: 328 HTAPGHGQDDYVVGTRYGLPVISPINNKGHLTEEAGKFAGM-FYKKANKEIAAHMDETGH 386

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
           L+M +  EH YP+DWR+K P IFRATEQWF   EG   R+ A+ AI  V ++P
Sbjct: 387 LLMLKEIEHSYPHDWRSKTPVIFRATEQWFVRAEGSDLREKALKAIEDVDFIP 439



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 117/179 (65%), Gaps = 6/179 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW +SVDY  DV I   +L+QM++ YR++R T RY+LGN +D+  + + +SYD
Sbjct: 620 YGADILRLWCASVDYREDVKISENILKQMAEAYRRVRNTARYILGNTNDFDPIKDRVSYD 679

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +LP ID++A+ +LE + + + E+Y  Y+F+ +F  I  F  +D+S FY D+ KDRLY   
Sbjct: 680 ELPEIDRWAMHKLETLKRKVTENYNKYEFYNLFHDIHYFAGIDMSAFYLDIIKDRLYAEN 739

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW 754
             S  RR+ QTV+   L+S+ ++IAPIL   AE++W  +P     E    AE +  SKW
Sbjct: 740 GDSVDRRAAQTVMYEVLVSMNKMIAPILSFTAEEIWSKIP-----ETSKDAESILISKW 793


>gi|66800699|ref|XP_629275.1| isoleucyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74996458|sp|Q54CE4.1|SYIM_DICDI RecName: Full=Probable isoleucine--tRNA ligase, mitochondrial;
           AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS;
           Flags: Precursor
 gi|60462665|gb|EAL60867.1| isoleucyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 1034

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/476 (46%), Positives = 299/476 (62%), Gaps = 34/476 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           + HT++LPKTTF M+ANA  REP + K  D ++++    + N GEN+V HDGPPYANG+L
Sbjct: 43  FAHTLNLPKTTFSMKANAATREPTLLK--DPYKLYKWQLENNKGENWVFHDGPPYANGDL 100

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNKILKDI+NRYK+L+ +KV Y+PGWDCHGLPIE +  + L + +  D+  S +R
Sbjct: 101 HMGHALNKILKDIVNRYKVLKGFKVNYIPGWDCHGLPIEQQAFKKLKKSS--DMKASDIR 158

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
             A  FA+  ++ Q   F+  G+  DW NPY TLD  YE  QI+ F  M  +GYIYRG K
Sbjct: 159 KIAGDFARKEIEKQSKGFQEMGILGDWENPYKTLDYGYEVEQIQTFYDMFNKGYIYRGVK 218

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAP-------PSTSGLLNEFLPDLG 338
           PVHWSPSSRTALA+AELEY   H S+SI+  F + S         P+TS  +N+    + 
Sbjct: 219 PVHWSPSSRTALADAELEYNNNHTSKSIFVKFNVKSLSNHILNNLPTTSD-INKAEMVIS 277

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
             +WTTTPWT+PAN A+ VN+++ Y +V                  +P    + + ++FI
Sbjct: 278 AIIWTTTPWTIPANQAICVNSEMDYILV------------------KPIESEQYRNEMFI 319

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           I    L    ++    +L +     G  L+     HP  +R+ P +I GD++   SGTGL
Sbjct: 320 ISKERLESLTKSFNIGELKVILEFKGEQLKGTITKHPQYDRESP-IITGDHVIEGSGTGL 378

Query: 459 VHTAPGHGQEDY-VTSLKY-GLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLD 515
           VHTAPGHG ED+ +   +Y  L +LSPV+D G FT+E G KF GL+VLGDGN AV+  L+
Sbjct: 379 VHTAPGHGVEDFQICQQQYPDLKVLSPVNDLGCFTDEVGEKFVGLEVLGDGNEAVINDLE 438

Query: 516 EQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
              SL+ +E Y HKYPYDWRTKKP I R T QWF  ++  ++ A+ +I +V  VPP
Sbjct: 439 TIGSLLHKEDYIHKYPYDWRTKKPIIIRTTLQWFVGLKNIQKTALQSIERVNMVPP 494



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 99/160 (61%), Gaps = 2/160 (1%)

Query: 573 EAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNS 631
           + P YG D+LR WV+S DY+ D+ IGP +L ++ D  +K+R TLR++L +  D+    ++
Sbjct: 678 QNPPYGVDLLRTWVASSDYSKDISIGPNILIKILDGIKKIRNTLRFMLASNFDFDPTIHA 737

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           I Y+ L  +D+YAL ++  + +++   Y+ +QF K+   I  F I ++S+FYFDV K  L
Sbjct: 738 IPYEKLSSLDKYALHRVFKLQESVTRHYDQFQFQKVHTEIINFSI-EISSFYFDVIKRHL 796

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
           Y     S +RRS QTVL   L  I   +API  H +EDV+
Sbjct: 797 YAESPNSHSRRSTQTVLFKMLDVINIALAPITVHTSEDVF 836


>gi|220931770|ref|YP_002508678.1| isoleucyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782408|sp|B8CWL4.1|SYI_HALOH RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|219993080|gb|ACL69683.1| isoleucyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 929

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/469 (47%), Positives = 295/469 (62%), Gaps = 36/469 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T++LP+T F MRAN   REP I K W+++ V+ +     +G + F+LHDGPPYANG+
Sbjct: 3   YKETINLPRTEFPMRANLSKREPGIEKYWEENNVYEKAIKNREGNKQFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDI+ RYK L  Y   YVPGWD HGLPIE KV + + + AK DL+ S+L
Sbjct: 63  IHIGHALNKILKDIVTRYKTLSGYYSPYVPGWDTHGLPIEHKVTKEMGDKAK-DLSVSEL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   +A   V+ Q   FKR GVW +W+ PYLTL+PEYE  QIEVFG+M+ +G  Y+GK
Sbjct: 122 RDKCRDYALKYVERQKEQFKRLGVWGEWDKPYLTLNPEYEVKQIEVFGEMAKRGLFYKGK 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP-DLGLAVWT 343
           KPVHW PS  TALAEAE+EY E H S SIY  F +     +  G+  E  P D  + +WT
Sbjct: 182 KPVHWCPSCETALAEAEVEYGE-HRSPSIYVKFPL-KDKVNVGGV--ELTPGDSYVVIWT 237

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+A++ +  Y VV+          A   K               +++A +
Sbjct: 238 TTPWTIPANMAIALHPEFDYVVVK----------ASGEK---------------LVMARE 272

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           LV  +  EA+     V+ +   G++LEN R  HP ++R   ++I GD++T E GTG VHT
Sbjct: 273 LVDRVMEEAEVENYKVVGQAFKGTELENKRCRHPFEDRD-SILILGDHVTLEQGTGCVHT 331

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG +DY+  LKY L I +P+D+ G FTEEA +F+G+    D N  V K LDE+  L+
Sbjct: 332 APGHGHDDYLVGLKYDLDIYAPMDNRGVFTEEAERFAGM-YYDDVNKEVTKILDEKGLLM 390

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                 H+YP+ WR K   IFRAT+QWFAS+E  ++ A+ AI  V W P
Sbjct: 391 NLSFISHQYPHCWRCKGALIFRATDQWFASIEAIKEEALKAIHSVDWYP 439



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/220 (37%), Positives = 144/220 (65%), Gaps = 13/220 (5%)

Query: 562 AIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 620
           +IG V  V PQ+    YGAD+LRLWV+S ++  DV +  ++L+Q S++YR++R T R++L
Sbjct: 605 SIGNV--VSPQDVIKRYGADILRLWVASSNFKDDVRVSDRILKQNSEVYRRIRNTFRFIL 662

Query: 621 GNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDL 679
           GN++D+  G   + Y+D   ID++ + +L++++K++  +Y+ Y++ +++  +  F  +++
Sbjct: 663 GNINDFNPGQHYVDYNDRAEIDRWIMIKLQDLIKDVTRAYDEYEYHRVYHDVHNFCTIEM 722

Query: 680 SNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT 739
           S+ Y D+ KDRLYT GT S +RRS Q+ L   LL +V+++AP+L H AE+VWQ+L     
Sbjct: 723 SSLYVDIVKDRLYTDGTNSLSRRSAQSTLYDILLVLVKLVAPVLAHTAEEVWQHLD---- 778

Query: 740 LEDGSAAEFVFESKWP-VLDEKWRTFPVGEIYFWGKILEV 778
            E    AE +F + WP V++E +    + +   W K+LEV
Sbjct: 779 -ESSKDAESIFLTDWPEVVNEYYDDRLMSK---WDKLLEV 814


>gi|325288845|ref|YP_004265026.1| isoleucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324964246|gb|ADY55025.1| Isoleucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 924

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/527 (41%), Positives = 322/527 (61%), Gaps = 61/527 (11%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y+ T++LP+T F MR N   REP+I + W++  ++ +V +   G   F+LHDGPPYANG+
Sbjct: 3   YRETLNLPQTDFPMRGNLPQREPDILQKWENGDIYGQVQESRRGRRKFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK+LKDII R+K +Q Y   YVPGWD HGLPIE +V++ L  + +  ++  + 
Sbjct: 63  IHLGHALNKVLKDIIIRFKTMQGYDAPYVPGWDTHGLPIEQQVIKKLGLN-RHAVSTLEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           RA+ + +AK  V+ Q A FKR GV  +W+N YLTL  EYEAAQI VFG+M+ +GYIY+G 
Sbjct: 122 RARCSDYAKEYVEIQKAEFKRLGVRGNWDNAYLTLHKEYEAAQIGVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W PS  TALAEAE++Y +   S +I+  F +        GLL +   +  + +WTT
Sbjct: 182 KPVYWCPSCETALAEAEIDYADKK-STAIFVKFPV----KEDQGLLGK--DNTSVVIWTT 234

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A++V+ + +YA+V                  R G       + +++VA +L
Sbjct: 235 TPWTLPANLAISVHPEYEYALV------------------RDG-------EEYLVVAKEL 269

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           +  L   W  +L   KT+ G +LE     HP+ +R   V+I G+++T E GTG VHTAPG
Sbjct: 270 MEALNKTWNRELTAVKTVKGKELEGIVCRHPLMSRD-SVLICGEHVTLEQGTGCVHTAPG 328

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++D++   +YGL +L PVD +GKFT+E G++ G+ V    N  ++K L E   LI ++
Sbjct: 329 HGEDDFIVGRQYGLDVLCPVDHQGKFTKEGGQYEGMKV-EQANAVILKDLQEAGMLIHQD 387

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVL-- 582
             +H YP+ WR K P IFRATEQWFAS++GFRQAA++ I +V+W+     P +G D +  
Sbjct: 388 KIKHSYPHCWRCKNPIIFRATEQWFASIDGFRQAALEEIDRVEWI-----PAWGKDRIYN 442

Query: 583 -------------RLW-----VSSVDYTGDVMIGPQVLRQMSDIYRK 611
                        R W     +   +  G  +I  Q + ++ +I+R+
Sbjct: 443 MIADRGDWCISRQRTWGVPIPIFYCEDCGKEIINEQTIEKLQEIFRQ 489



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/169 (42%), Positives = 108/169 (63%), Gaps = 1/169 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P Q     GAD+LRLWVSS DY  DV   P+++ QM + YRK+R TLR+LLGNL+D+   
Sbjct: 605 PLQVVRDMGADILRLWVSSADYRNDVAASPRIMNQMVEAYRKIRNTLRFLLGNLYDFNPE 664

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + + Y  L  ID++ L +L  +++ + ++YE+Y+F  ++  +  F  V+LS  Y D+ K
Sbjct: 665 QDRVEYSKLQEIDRWVLTRLARVIEKVIKAYETYEFHVVYHTVHNFCTVELSAIYLDIVK 724

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           DR Y  G  S  RRS QTV++  L ++VR++APIL   A+++W  +P A
Sbjct: 725 DRAYVEGKESLLRRSAQTVMNEILNALVRLLAPILVFTADEIWAYIPGA 773


>gi|149183948|ref|ZP_01862330.1| isoleucyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848344|gb|EDL62612.1| isoleucyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 876

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/470 (46%), Positives = 298/470 (63%), Gaps = 45/470 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REPE+ + W++  ++ +V ++ +G   F+LHDGPPYANG+
Sbjct: 18  YKDTLLMPKTEFPMRGNLPKREPEMQEKWNEMDIYKKVQERTEGRPLFILHDGPPYANGD 77

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           LHMGHALNK+LKD I RYK +  Y   YVPGWD HGLPIE    Q+L +    +K++T +
Sbjct: 78  LHMGHALNKVLKDFIVRYKSMSGYNAPYVPGWDTHGLPIE----QALTKKGVNRKEMTVA 133

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R    ++A   + +Q   FK+ GV  DW+NPY+T+ PEYEA QI+VFG M+ +GYIY+
Sbjct: 134 EFRKLCEEYAYGQIDSQRTQFKQIGVRGDWDNPYITMKPEYEAEQIKVFGDMANKGYIYK 193

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WSPSS +ALAEAE+EY +   S SIY  F++       +G+L E      + +W
Sbjct: 194 GLKPVYWSPSSESALAEAEIEYQDKR-SPSIYVGFKVKEG----NGVLEE---GTQIIIW 245

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+ V+A L Y V E++           NK                +VA 
Sbjct: 246 TTTPWTIPANLAITVHADLSYVVAEVE----------GNK---------------YVVAE 280

Query: 403 DLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           DL+  + +  +W    V+ KT+ GS+LE  +  HP+ +R+  +VI GD++TT+SGTG VH
Sbjct: 281 DLLEEVTSVLEWNDPTVV-KTVKGSELEQVKAQHPLYDRES-LVILGDHVTTDSGTGCVH 338

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG++DY+   KYGL IL PV+D+G  TEEA  F GL      N  + + L E  +L
Sbjct: 339 TAPGHGEDDYLVGKKYGLDILCPVNDKGVMTEEAPGFEGL-FYDAANKPITEKLQEAGAL 397

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +  E   H YP+DWRTKKP IFRAT QWFAS++ FR+  + A+   KWVP
Sbjct: 398 LKLEFITHSYPHDWRTKKPVIFRATPQWFASIDAFREDLLQAVKDTKWVP 447



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 120/174 (68%), Gaps = 2/174 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     GAD+LRLWV+SVDY  DV +   +L+Q+S++YRK+R T R+LLG
Sbjct: 612 SIGNIV-VPDKVIKQMGADILRLWVASVDYQADVRLSDAILKQVSEVYRKIRNTYRFLLG 670

Query: 622 NLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+    ++ISYD+L  +DQ+ L +L +++K++  +YE+Y+F  I+  +  F  +DLS
Sbjct: 671 NLADFNPEKDAISYDNLREVDQFMLVKLNDLIKSVTTAYENYEFSSIYTSVNNFCTLDLS 730

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           +FY D AKD LY     +F RR+ QTVL   LL++ ++++PIL H A++VW ++
Sbjct: 731 SFYLDFAKDVLYIEAEDNFERRAMQTVLHESLLALTKLMSPILSHTADEVWSHM 784


>gi|335040585|ref|ZP_08533711.1| Isoleucyl-tRNA synthetase [Caldalkalibacillus thermarum TA2.A1]
 gi|334179555|gb|EGL82194.1| Isoleucyl-tRNA synthetase [Caldalkalibacillus thermarum TA2.A1]
          Length = 926

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 214/466 (45%), Positives = 293/466 (62%), Gaps = 36/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y+ T+ + KT F MRAN   REPEI K WD+  ++ +V ++  G   ++LHDGPPYANG+
Sbjct: 3   YRETLQVMKTDFPMRANLPKREPEIQKWWDEIDIYRKVQERTKGRPTYILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK+LKDI+ RYK +  Y   YVPGWD HGLPIE  V+++   D KK +   K 
Sbjct: 63  IHVGHALNKVLKDIVVRYKSMTGYHAPYVPGWDTHGLPIEHAVIKNEKVDRKK-VGIIKF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A+  +  Q   FKR GV  DW+NPY+T  PEYEA QI+VFG+M+ +GYIY+G 
Sbjct: 122 RQLCKQYAEKYINRQREQFKRLGVLGDWDNPYITFQPEYEARQIKVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F++        G L+E   D  + +WTT
Sbjct: 182 KPVYWSPSSESALAEAEIEYKDKR-SPSIYVAFKVKDG----KGKLDE---DTEVVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+AV+ + +YA + +                      K QK +      + 
Sbjct: 234 TPWTIPANLAIAVHPEFEYAQIRV----------------------KGQKYLVAKGLLEQ 271

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           +       G +L+  KT  G +LE     HP+ +R+ PV++ G+++T ESGTG VHTAPG
Sbjct: 272 LEKELEWEGYELL--KTFKGEELEYVITRHPLYDRESPVIL-GEHVTLESGTGCVHTAPG 328

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG+ED+    KY L +LSP+DD G FTEEA  F GL    + N  + + LDE  +L+   
Sbjct: 329 HGEEDFYVGQKYNLGVLSPIDDRGYFTEEAPGFEGL-FYDEANKVITQKLDEAGALLKLS 387

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              H YP+DWR+KKP IFRATEQWFAS++GFR+  ++ I +VKWVP
Sbjct: 388 FITHSYPHDWRSKKPVIFRATEQWFASIDGFREQMLEEIKKVKWVP 433



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 124/194 (63%), Gaps = 8/194 (4%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GAD+LRLWVSSV+YT DV I  ++L+Q++++YRK+R TLR++LGNL D+  
Sbjct: 605 VPQKVMDQLGADILRLWVSSVEYTQDVRISDEILKQIAEVYRKIRNTLRFMLGNLADFDP 664

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + ++ +D   +D++ + + + ++K +R++YE +QF  ++  I  F  ++LS FY DV+
Sbjct: 665 EKDRVAREDWSELDRFIMLKAQQVLKRVRQAYEDFQFHTVYTTIHNFCTIELSAFYLDVS 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LYT    S  RR+ QTV+   L  +V+++ PI+PH  E+VW+ +P       G   E
Sbjct: 725 KDLLYTEAPQSTARRATQTVIYDILTMLVKLLTPIIPHTTEEVWKFIP-------GVQEE 777

Query: 748 FVFESKWPVLDEKW 761
            V  + +P +DE +
Sbjct: 778 SVQLTDFPEVDESY 791


>gi|440791598|gb|ELR12836.1| isoleucine-tRNA ligase [Acanthamoeba castellanii str. Neff]
          Length = 978

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/469 (44%), Positives = 299/469 (63%), Gaps = 33/469 (7%)

Query: 106 YKHTVDLPKTTFGM----RANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           + HT++LP+TTF +    +A   +    + ++ D+  ++   A +   ++FVLHDGPPYA
Sbjct: 30  FGHTLNLPRTTFPLYTTEKAQLQLEGSLLAEVSDN--LYAWQAQQQRQKSFVLHDGPPYA 87

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG LH GH +NK+LKDI+NRYKLL+ + ++YVPGWDCHGLPIELK +      +   L+P
Sbjct: 88  NGPLHTGHVMNKVLKDIVNRYKLLRGHAIKYVPGWDCHGLPIELKAVDQAKSGST--LSP 145

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           +++RAKA   A+  +  QM  F+ +GV  +WNNPY T DP+YEA+Q+ +F  +  +GY+Y
Sbjct: 146 TEIRAKAHACAEEAIAQQMKGFRSWGVMGEWNNPYATKDPKYEASQLGLFLDLYKKGYVY 205

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPV WSPSSRTALAEAE+EY + HVS S+Y  F  V    + +G L+ F  +L   +
Sbjct: 206 RGLKPVIWSPSSRTALAEAEVEYSDTHVSPSVYVAFS-VKHLANKAGELSRF-NNLHALI 263

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN A+ VN  ++Y+VV+                        DQ     ++A
Sbjct: 264 WTTTPWTIPANMAICVNPNIEYSVVKT----------------------TDQHDKHYVIA 301

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           SD +  ++     ++ +   L GS L +  YVHP+D R+  V + G ++TTESGTGLVHT
Sbjct: 302 SDRLQAMQELLKQEIEVCARLPGSSLADTIYVHPLDGRELKV-LPGTHVTTESGTGLVHT 360

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +DYV    +G+P+ S VDD GKFT++  +F+G  VLG GN  V++ L ++ +L+
Sbjct: 361 APAHGADDYVVCKAHGIPLRSFVDDNGKFTQDLPEFAGKFVLGPGNELVIQALTDKGALV 420

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +  Y HKYPYDWRTKKP I RATEQWF  ++     A+D I +V+ VP
Sbjct: 421 HQHKYTHKYPYDWRTKKPIIMRATEQWFVDLKDVVAPALDEISRVQMVP 469



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/191 (41%), Positives = 112/191 (58%), Gaps = 5/191 (2%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           ++  G G DVLR+WV+S DY+ D +IGP V+ +M    RKLR T R+LLGNL D+    +
Sbjct: 645 EKKAGCGVDVLRMWVASSDYSRDTLIGPVVINKMKGSLRKLRNTARFLLGNLADYDRRQA 704

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           I  DDL  ID+Y L +L      +   Y+ YQF K+++ +  F  VDLS FYF+V KDRL
Sbjct: 705 IPDDDLTGIDRYMLHKLHEFSHGVTTDYDDYQFSKVYRGLVNFATVDLSAFYFEVVKDRL 764

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           Y   T S  RRS QTVL   L ++   +API P  A+D+ +     +  +  + A  VF 
Sbjct: 765 YADATDSLRRRSTQTVLRHTLDALTAALAPIAPFTAQDIHR-----HDAQAAAVAPNVFH 819

Query: 752 SKWPVLDEKWR 762
            +WP   ++W+
Sbjct: 820 LEWPRAGDQWK 830


>gi|397905184|ref|ZP_10506055.1| Isoleucyl-tRNA synthetase [Caloramator australicus RC3]
 gi|397161833|emb|CCJ33389.1| Isoleucyl-tRNA synthetase [Caloramator australicus RC3]
          Length = 931

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/469 (44%), Positives = 290/469 (61%), Gaps = 36/469 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           Y  T++LP+T F MRAN   +EP I K W+D  ++ +  +KN G+  F+LHDGPPYANG+
Sbjct: 3   YSKTLNLPQTEFAMRANLPQKEPNILKEWEDIDIYKKALEKNKGKTPFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH LNKILKD+IN+YK ++ +   YVPGWD HGLPIEL+ L+ L      D++  + 
Sbjct: 63  IHLGHTLNKILKDMINKYKTMRGFYAPYVPGWDTHGLPIELQALKKLGIKVH-DVSTIEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A   V+ Q   FKR GV  DW NPYLTL PE+EA QIE+FG M+ +GYIY+G 
Sbjct: 122 RNMCRDYALEQVERQKEQFKRLGVIGDWENPYLTLSPEFEAKQIEIFGDMAQKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF---LPDLGLAV 341
           KPV+W PS  TALAEAE+EY +   S SIY  FR++       GL  +    L ++   +
Sbjct: 182 KPVYWCPSCETALAEAEIEY-DDETSNSIYVKFRLL----DDKGLFKDLGVNLNNIYYVI 236

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTT WT+PAN A+ +     Y +                         K  ++V+I+  
Sbjct: 237 WTTTTWTLPANLAICLGPDFDYVLA------------------------KFNEEVYIVAK 272

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
             L    +A       I  T  G +LE     HP  +R+  +++ G+++T ESGTG VHT
Sbjct: 273 ELLENVKKAAKLEGEEILATFKGYELEGQVCHHPFFDRESLIIV-GEHVTLESGTGCVHT 331

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG+ED+    KYGL +L+PVD +G+FTE AGK++GL    +GN A+++ L E   L+
Sbjct: 332 APGHGEEDFYIGQKYGLEVLNPVDGKGRFTELAGKYAGL-TYKEGNKAILQDLRESNMLL 390

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            EE   H YP+ WR K P IFRATEQWFAS+EGFR++A++AI +VKW+P
Sbjct: 391 AEEKITHSYPHCWRCKNPIIFRATEQWFASIEGFRKSAIEAIKEVKWIP 439



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 128/186 (68%), Gaps = 5/186 (2%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGADVLRLWVSS DY  DV +   +L+Q+S++YRK+R T R+LLGNL+D+    + + Y+
Sbjct: 618 YGADVLRLWVSSADYKSDVRMSKDILKQLSEVYRKIRNTARFLLGNLYDFNPDTDMVDYE 677

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           ++  +D++AL +L++++K++ ++YE+Y+F  ++  I  F +VD+SNFY D+ KDRLYT  
Sbjct: 678 EMNELDKWALLKLQHLIKDVTDAYENYEFHILYHDIHNFCVVDMSNFYLDIIKDRLYTER 737

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             S  RR+ QTVL   L ++V++IAP+L   A+++W+ +P +      +  E V  + WP
Sbjct: 738 PDSKERRAAQTVLWTILDALVKMIAPVLSFTADEIWKYMPKS----KNNNFESVHLADWP 793

Query: 756 VLDEKW 761
            + EK+
Sbjct: 794 EVVEKY 799


>gi|332981922|ref|YP_004463363.1| isoleucyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699600|gb|AEE96541.1| Isoleucyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 924

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 218/523 (41%), Positives = 309/523 (59%), Gaps = 50/523 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           Y  T++LPKT F M+AN   REP I K W+D+ ++ +  + ND +  F+LHDGPPYANG+
Sbjct: 3   YSKTLNLPKTDFPMKANLSQREPAILKWWEDNDLYRKSLEVNDQKPLFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII ++K ++ YK  YVPGWD HGLPIE + ++ L  + + +  P + 
Sbjct: 63  IHLGHALNKILKDIIVKFKSMRGYKAPYVPGWDTHGLPIESQAIKKLGVN-RYETDPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     FA   V  Q   FKR G+  DW+NPYLTL PE+EA QIEVFG+M+ +GYIY+G 
Sbjct: 122 RRMCRDFALKYVDIQKDEFKRLGIRGDWDNPYLTLKPEFEAKQIEVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W     TALAEAE+EY + H + S+Y  F +V       G+ N +     L +WTT
Sbjct: 182 KPVYWCTDCETALAEAEIEYAD-HATESLYVKFPVVDDKGLFDGVDNAY-----LVIWTT 235

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           T WT+PAN AV +N  ++Y +V                         D  +V+++  + L
Sbjct: 236 TAWTLPANMAVCLNPDIEYGLVRF-----------------------DNGEVYVLAVA-L 271

Query: 405 VPTLEAKWGT-KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + ++ A  G     I K   G  LE  +  HP  +R  PV++ G+Y+T E GTG VH AP
Sbjct: 272 IDSVAADAGLGHYDILKRFKGKQLEGIKAKHPFFDRFSPVIL-GEYVTLEQGTGCVHIAP 330

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHGQED+    KYGL +L+PVDD+G  T++AGKF+G+    D   A+++ L+    L+  
Sbjct: 331 GHGQEDFEVGRKYGLEVLNPVDDKGYMTQKAGKFAGM-FYEDAGRAIIEELNANKMLLAV 389

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP----------QE 573
           +  +H YP+ WR K P IFRATEQWFAS++GFRQ A+DA+  VKW P           +E
Sbjct: 390 KTVQHSYPHCWRCKNPVIFRATEQWFASIDGFRQQALDAVASVKWTPAWGQERMSGMIRE 449

Query: 574 APGYGADVLRLW-----VSSVDYTGDVMIGPQVLRQMSDIYRK 611
              +     RLW     +      G+ +I  + +  +SD++R+
Sbjct: 450 RYDWCISRQRLWGVPIPIFYCKDCGEAIINDETVAAVSDLFRQ 492



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 137/212 (64%), Gaps = 8/212 (3%)

Query: 569 VPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 627
           V PQ+    YGAD+LRLWV+S DY  D+ I   +L+Q+S++YRK+R T R+L+GNL+D+ 
Sbjct: 607 VDPQDVVQEYGADILRLWVTSADYKNDMRISKSILKQLSEVYRKIRNTARFLMGNLYDFN 666

Query: 628 VG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
              +++ YD+L  ID++AL +L  +++ + E+Y++Y++  +   I  F +VD+SNFY DV
Sbjct: 667 PDTDAMPYDELKEIDRWALMRLHQLIQEVTEAYDNYEYHVVHHAIYGFCVVDMSNFYLDV 726

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 746
            KDRLYT    S  RRS QTVL A L ++VR++AP+L   AE++W+ +P +     G+  
Sbjct: 727 LKDRLYTYRADSKERRSAQTVLYAILDAMVRMLAPVLSFTAEEIWRYMPHSA----GNDT 782

Query: 747 EFVFESKWPVLDEKWRTFPVGEIYFWGKILEV 778
             V  + WPV D  +    + E   W K++EV
Sbjct: 783 RSVHLASWPVADGSYIDSALMEK--WDKLIEV 812


>gi|311068064|ref|YP_003972987.1| isoleucyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|419823955|ref|ZP_14347488.1| isoleucyl-tRNA ligase [Bacillus atrophaeus C89]
 gi|310868581|gb|ADP32056.1| isoleucyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|388471992|gb|EIM08782.1| isoleucyl-tRNA ligase [Bacillus atrophaeus C89]
          Length = 920

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/467 (45%), Positives = 292/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REPE+ K W++  ++  V ++  D   FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGNLPNREPEMQKQWEEQDIYRLVQERTKDRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++  +  +K+++ ++ 
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKN-KKVKRKEMSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q   FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEEYAWQQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F    A     G+L        + +WTT
Sbjct: 182 KPVNWSPSSESALAEAEIEYQDKR-SASIYVAF----AVKDGKGVLEN---GERIIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L+Y+V+ +     GD                       + AS L
Sbjct: 234 TPWTIPANLGISVHPDLEYSVISVG----GDR---------------------FVAASAL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  + +  G  +  + KTL G +LEN    HP+  R   V++ GD++TT++GTG VHTAP
Sbjct: 269 VENVASACGFEQYEVLKTLKGKELENIVAEHPLYGRDSLVML-GDHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD++G  T EA  F G+    D N A+ + L+E+ +L+  
Sbjct: 328 GHGEDDFIVGQKYGLDVLCPVDEKGVMTSEAPGFEGM-FYDDANKAITQQLEEKGALMNL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E   H YP+DWRTKKPTIFRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRTDLLDAIKETKWVP 433



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 118/187 (63%), Gaps = 2/187 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKANAVAVEDLREVDQYILVKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            I  F  V+LS+FY D AKD +Y        RRS QTV    LL++ ++ APILPH  ++
Sbjct: 706 SIHNFCTVELSSFYLDFAKDVVYIEHADHPDRRSMQTVFYETLLALAKLTAPILPHTTDE 765

Query: 730 VWQNLPF 736
           +W +L F
Sbjct: 766 LWAHLTF 772


>gi|321315308|ref|YP_004207595.1| isoleucyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320021582|gb|ADV96568.1| isoleucyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 921

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 212/467 (45%), Positives = 293/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +K T+ +PKT F MR N   REP+I K W++  ++  V ++  D   FVLHDGPPYANG+
Sbjct: 3   FKDTLLMPKTDFPMRGNLPNREPDIQKKWEEEDIYRLVQERTKDRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++   + +K+++ ++ 
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKNKKVN-RKEMSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q   FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEEYAWKQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L        + +WTT
Sbjct: 182 KPVNWSPSSESALAEAEIEYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L+Y+V+ +     GD                       +VAS L
Sbjct: 234 TPWTIPANLGISVHPDLEYSVIAV-----GDDR--------------------FVVASAL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  + +  G  +  + +T+ G DLEN    HP+  R   V++ G+++TT++GTG VHTAP
Sbjct: 269 VENVASACGFDQYEVTRTVKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD++G  T EA  F G+    D N A+ + LDE+ +L+  
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E   H YP+DWRTKKPTIFRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 120/187 (64%), Gaps = 2/187 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 730 VWQNLPF 736
           +W +L F
Sbjct: 766 LWSHLTF 772


>gi|339009203|ref|ZP_08641775.1| isoleucyl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
 gi|338773681|gb|EGP33212.1| isoleucyl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
          Length = 928

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 215/467 (46%), Positives = 294/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           Y  T++LPKT F MR N  VREPE+   W++  ++ +V ++  D  +F+LHDGPPYANG+
Sbjct: 5   YGKTLNLPKTEFPMRGNLPVREPEVEARWEEMDIYKQVLERTKDRPSFILHDGPPYANGD 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH+LNK LKDII RYK +  +   Y+PGWD HGLPIE  ++ +   D ++++  +  
Sbjct: 65  IHIGHSLNKTLKDIIVRYKSMAGFYAPYIPGWDTHGLPIEQAIVNAQKLD-RRNIEVNDF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  ++A + V  Q   FKR G+  DW NPY+TL PEYEAAQI VFG M+ +GYIY+G 
Sbjct: 124 RKRCEEYAWSYVNKQRDQFKRLGIRGDWENPYVTLLPEYEAAQIRVFGAMATKGYIYKGL 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           + V+WSPSS TALA+AE+EY +   S SIY  F +        G L++   D G+ +WTT
Sbjct: 184 RCVYWSPSSETALADAEIEYHDKR-SASIYVRFMVKDG----KGKLDQ---DTGVIIWTT 235

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+++N  L+Y+VV           A  NK                +VAS L
Sbjct: 236 TPWTLPANKAISLNPDLEYSVV----------IADGNK---------------YVVASGL 270

Query: 405 VPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V ++  + G + V   +T  GSDLE     HP  +R  P+++ GD++T ++GTG VHTAP
Sbjct: 271 VESVTKEIGWEQVETVQTFKGSDLEGIETQHPFYDRISPIIL-GDHVTLDAGTGCVHTAP 329

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D+  S KY + +L PVD EGK T+EA  F GL    D N  V + L E  +L+  
Sbjct: 330 GHGEDDFNVSKKYNIEVLCPVDHEGKMTQEAPGFEGL-FYEDANKVVSEKLKENGALLKL 388

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H YP+DWRTKKP IFRATEQWFASVEGFR   ++AI +VKW P
Sbjct: 389 SFITHSYPHDWRTKKPIIFRATEQWFASVEGFRSQMLEAIKEVKWTP 435



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 112/168 (66%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GAD+LRLWVSSVDY  D  I   +L Q +++YRK+R T R+LLGNL  +  
Sbjct: 606 VPKEVTDKLGADILRLWVSSVDYQSDHRISDAILAQNAEVYRKIRNTFRFLLGNLAGFDP 665

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
           + + + YD LP +D++ L +   +VK  R++Y+ YQF  ++Q +  F  ++LS+FY D++
Sbjct: 666 MKDRVEYDRLPELDRFMLAKAAEMVKRTRKAYDEYQFHTVYQTVHNFCTIELSSFYMDIS 725

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KDRLY     S  RR+ QTV+   LL +V++++PI+PH A++VWQ +P
Sbjct: 726 KDRLYVEAPDSEERRAAQTVMYDILLDLVKLLSPIIPHTADEVWQFIP 773


>gi|443632788|ref|ZP_21116967.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. inaquosorum
           KCTC 13429]
 gi|443347611|gb|ELS61669.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. inaquosorum
           KCTC 13429]
          Length = 921

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 212/467 (45%), Positives = 293/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +K T+ +PKT F MR N   REP+I K W++  ++  V ++  D   FVLHDGPPYANG+
Sbjct: 3   FKDTLLMPKTDFPMRGNLPNREPDIQKKWEEQDIYRLVQERTKDRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++   + +K+++ ++ 
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKNKKVN-RKEMSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q   FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEEYAWKQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L        + +WTT
Sbjct: 182 KPVNWSPSSESALAEAEIEYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L+Y+VV +     G+                       +VAS L
Sbjct: 234 TPWTIPANLGISVHPDLEYSVVAV-----GEDR--------------------FVVASAL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  + +  G  +  + +T+ G DLEN    HP+  R   V++ G+++TT++GTG VHTAP
Sbjct: 269 VENVASACGFDQYEVTRTIKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD++G  T EA  F G+    D N A+ + LDE+ +L+  
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E   H YP+DWRTKKPTIFRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 120/187 (64%), Gaps = 2/187 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 730 VWQNLPF 736
           +W +L F
Sbjct: 766 LWSHLTF 772


>gi|296133361|ref|YP_003640608.1| isoleucyl-tRNA synthetase [Thermincola potens JR]
 gi|296031939|gb|ADG82707.1| isoleucyl-tRNA synthetase [Thermincola potens JR]
          Length = 934

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 212/466 (45%), Positives = 296/466 (63%), Gaps = 30/466 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y  T++LP+T F MRAN   REPEI K W+D+ ++ +V +KN G E F+LHDGPPYANG+
Sbjct: 3   YSKTLNLPQTEFPMRANLSEREPEILKFWEDNSIYKKVQEKNAGKEKFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH LNK+LKDII ++K +  +   +VPGWD HGLPIE + +++L  + + ++ P + 
Sbjct: 63  IHLGHTLNKVLKDIIVKFKSMDGFDAPFVPGWDTHGLPIEQQAIKALGIN-RHEVGPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V  Q   FKR G   DW+NPYLTL P +EA QIEVFG+M+ +GYIY+G 
Sbjct: 122 RKKCKEYALKYVDIQREQFKRLGCRGDWDNPYLTLQPHFEAKQIEVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W  S  TALAEAE+EY E   S SIY  F    A     G+L E   +  + +WTT
Sbjct: 182 KPVYWCASCETALAEAEIEYAEKK-SASIYVKF----AVKDGKGVLPE--DNTFVVIWTT 234

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+AV+   +Y++VE++     DS     +      +L     VF I   D 
Sbjct: 235 TPWTIPANVAIAVHPDFEYSLVEVK-----DSERKGERYVIAKEMLAGVMDVFDIKFYDE 289

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           +              KT+ G +LE     HP+  R   +VI G+++T E+GTG VHTAPG
Sbjct: 290 L--------------KTIRGQELEYVVCKHPLIERDS-LVILGEHVTLEAGTGAVHTAPG 334

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG ED+     Y LP+++P+D++G+FTEE G F G D   +GN  VV  LD+  +L+  E
Sbjct: 335 HGLEDFEIGKVYNLPVINPIDNKGRFTEEGGIFCGQDT-NEGNKNVVIELDKVGALLKLE 393

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              H+YP+ WR K P +FRATEQWFAS++GFR+ A++AI +V+W+P
Sbjct: 394 WIRHQYPHCWRCKNPILFRATEQWFASIDGFRKEALEAIKEVQWIP 439



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 69/160 (43%), Positives = 110/160 (68%), Gaps = 1/160 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSS DY  DV +   +L+QMS+ YRK+R T RY+LGNL+D+    +++ Y+ 
Sbjct: 623 GADILRLWVSSADYKADVALSSNILKQMSEAYRKIRNTARYILGNLYDFDPAKDTVPYEQ 682

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +D++AL +L  + K +  +Y +Y+F  ++  I  F  VD+S FY D+ KDRLYT   
Sbjct: 683 MEELDKWALLKLHKLSKRVLNAYRNYEFHILYHAIHNFCAVDMSAFYLDIIKDRLYTSLP 742

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           +S  RR+ QTV+   + ++VR+IAP+L + AE++W+ +P+
Sbjct: 743 SSVERRAAQTVMYEIINTLVRLIAPVLSYTAEEIWRYIPY 782


>gi|78043727|ref|YP_359392.1| isoleucyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|123743221|sp|Q3AEP2.1|SYI_CARHZ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|77995842|gb|ABB14741.1| isoleucyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 925

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 217/467 (46%), Positives = 292/467 (62%), Gaps = 39/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  T++LP T F MR N   REPEI   W    ++ +V  KN+G   F+LHDGPPYANG+
Sbjct: 3   YGKTLNLPVTDFPMRGNLPEREPEILAYWQKIDLYRKVQQKNEGRPKFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGH LNK+LKD+I ++K +  Y   YVPGWD HGLPIE + ++ L  + +K+++P + 
Sbjct: 63  IHMGHVLNKVLKDMIVKFKSMDGYDAPYVPGWDTHGLPIEQRAIKDLGIN-RKEISPLEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           RAK  ++A+   + Q   FKR GV  DW NPYLTL P YEA QIE+FG+M+ +GYIY+G 
Sbjct: 122 RAKCREYAEKYARIQKEQFKRLGVRGDWENPYLTLMPHYEAKQIEIFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W P   TALAEAE+EY E   S SIY  F++V       G + E   D  L +WTT
Sbjct: 182 KPVYWCPVCETALAEAEIEYAEKK-SPSIYVRFKVVEG----KGKVPE---DAYLVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+AV+ +  YA+V+ +   +GD                       +VA  L
Sbjct: 234 TPWTLPANVAIAVHPEFTYALVKTE---KGD----------------------YVVAEGL 268

Query: 405 VPT-LEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V    EA   T  ++ +   G +L      HP   R+ PVV+  DY+T ESGTGLVHTAP
Sbjct: 269 VQQFFEATKLTGEIVAR-FKGEELLGVVTRHPFIERESPVVL-ADYVTLESGTGLVHTAP 326

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG ED+ T  KY LP+LSPV+ +G FTE AGK++G+ +  DGN A+ + L+    L+  
Sbjct: 327 GHGTEDFETGKKYNLPVLSPVNHQGVFTEGAGKYAGMKI-DDGNKAITQDLEASGDLLAM 385

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              +H YP+ WR K P IFRATEQWFAS++GFR+ A+  I +V+W+P
Sbjct: 386 SFIKHSYPHCWRCKNPVIFRATEQWFASIDGFREQALKEIEKVEWIP 432



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 116/202 (57%), Gaps = 9/202 (4%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-RVGNSISYDD 636
           GAD+LRLWV+S DY  D+ I   +L+Q ++ YRK+R T+R+LLGNL+D+    + + Y+ 
Sbjct: 616 GADILRLWVASADYRSDLAISNNILKQTAEGYRKIRNTIRFLLGNLYDYDHEKHRVPYER 675

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  ID++AL +L  ++  +  +Y  Y+F  +F  +  F  VD+S  Y D+ KDRLY    
Sbjct: 676 LLEIDRWALAKLHRLIARVVRAYRDYEFHVVFHAVHNFCTVDMSAIYLDIIKDRLYVELP 735

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 756
            S  RRS QTVL   L S++R++ PIL    E+ +++ P     E     +       P 
Sbjct: 736 DSEKRRSAQTVLYEILDSLLRLLTPILAFTTEEAYRHFPAKGKKESVQLLDM------PK 789

Query: 757 LDEKWRTFPVGEIYFWGKILEV 778
           ++E++    + E   W KILEV
Sbjct: 790 VEERYLDLTLEET--WDKILEV 809


>gi|374997213|ref|YP_004972712.1| isoleucyl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
 gi|357215579|gb|AET70197.1| isoleucyl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
          Length = 923

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 205/466 (43%), Positives = 296/466 (63%), Gaps = 36/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y++T++LP+T F MR N   +EPEI K W++ +++ +V    +G   F+LHDGPPYANG+
Sbjct: 3   YRNTLNLPETDFPMRGNLTKKEPEILKAWEEEKLYEKVQKAREGCPKFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NK+LKDII +YK ++ Y   YVPGWD HGLPIE +V++ L  + +  ++  + 
Sbjct: 63  IHLGHAINKVLKDIIVKYKTMKGYDAPYVPGWDTHGLPIEQQVIKKLGVN-RHAVSALEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   +AK  V  Q   FKR GV  DW++PY+TL  EYEAAQI VFG M+ +GYIY+G 
Sbjct: 122 RQKCQDYAKKYVGIQREEFKRLGVRGDWDHPYMTLQKEYEAAQIGVFGDMTKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W PS  TALAEAE+EY +    +S  A++   +     + L  E   +  + +WTT
Sbjct: 182 KPVYWCPSCETALAEAEIEYAD----KSATAIYVKFAVKDGLNVLPQE---NTYIVIWTT 234

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A++V+ +L+YA+V             ANK+               +VA  +
Sbjct: 235 TPWTLPANLAISVHPELKYALVS------------ANKER-------------WVVAEGM 269

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           + +L + W   L ++KT  G +LE+    +P+ +R    VI G+++T E+GTG VHTAP 
Sbjct: 270 LDSLRSLWKMDLPVEKTFKGKELEHINCKNPLMDRDSK-VICGEHVTLEAGTGCVHTAPA 328

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++D+    KYGLP+L PVD +GKFT E G ++GL      N  +V+ L     L++EE
Sbjct: 329 HGEDDFYVGKKYGLPVLCPVDHQGKFTSEGGAYAGLKT-AKANPVIVEDLKGSRDLVLEE 387

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             +H YP+ WR K P IFRATEQWFAS++GFRQA +  I +V+W+P
Sbjct: 388 IIDHSYPHCWRCKSPIIFRATEQWFASIDGFRQATLTEIEKVRWIP 433



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 113/172 (65%), Gaps = 1/172 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVDY  DV   P++++QMS+ YRK+R T+R+LL NL+D+    + ++Y +
Sbjct: 613 GADILRLWVSSVDYKNDVAASPRIMKQMSEAYRKIRNTMRFLLSNLNDFEPAKDKVAYPE 672

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  ID++AL +L  +V+ +   YE+Y+F   +  I  F  ++LS  Y D+ KDRLY  G 
Sbjct: 673 LQEIDRWALLKLSKVVERVLTGYETYEFHWAYHTIHNFCTIELSAVYLDIVKDRLYVEGK 732

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 748
           TS  RRS QTVL   L ++VR++APIL  +  ++W  +P   ++++   AE 
Sbjct: 733 TSLLRRSAQTVLYEVLDALVRLLAPILSFMTHEIWPYIPGEKSVDNVQIAEM 784


>gi|296331119|ref|ZP_06873593.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674274|ref|YP_003865946.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151763|gb|EFG92638.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412518|gb|ADM37637.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 921

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 213/467 (45%), Positives = 292/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +K T+ +PKT F MR N   REP+I K W++  ++  V ++  D   FVLHDGPPYANG+
Sbjct: 3   FKDTLLMPKTDFPMRGNLPNREPDIQKKWEEEDIYRLVQERTKDRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++   + +K+++ ++ 
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKNKKVN-RKEMSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q   FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEEYAWKQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L        L +WTT
Sbjct: 182 KPVNWSPSSESALAEAEIEYQDKR-SASIYVAFGVKDG----KGVLEN---GERLIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L+Y+V+          A   N+                +VAS L
Sbjct: 234 TPWTIPANLGISVHPDLEYSVI----------AVGENR---------------FVVASAL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  + +  G  +  + +T+ G DLEN    HP+  R   V++ G+++TT++GTG VHTAP
Sbjct: 269 VENVASACGFDQYEVTRTIKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD +G  T EA  F G+    D N A+ + LDE+ +L+  
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDAKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E   H YP+DWRTKKPTIFRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 120/187 (64%), Gaps = 2/187 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 730 VWQNLPF 736
           +W +L F
Sbjct: 766 LWSHLTF 772


>gi|418033310|ref|ZP_12671787.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SC-8]
 gi|351469458|gb|EHA29634.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SC-8]
          Length = 923

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/467 (45%), Positives = 293/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +K T+ +PKT F MR N   REP+I K W++  ++  V ++  D   FVLHDGPPYANG+
Sbjct: 5   FKDTLLMPKTDFPMRGNLPNREPDIQKKWEEEDIYRLVQERTKDRPKFVLHDGPPYANGD 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++   + +K+++ ++ 
Sbjct: 65  IHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKNKKVN-RKEMSVAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q   FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G 
Sbjct: 124 RKLCEEYAWKQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGL 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L        + +WTT
Sbjct: 184 KPVNWSPSSESALAEAEIEYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTT 235

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L+Y+V+ +     G+                       +VAS L
Sbjct: 236 TPWTIPANLGISVHPDLEYSVIAV-----GEDR--------------------FVVASAL 270

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  + +  G  +  + +T+ G DLEN    HP+  R   V++ G+++TT++GTG VHTAP
Sbjct: 271 VENVASACGFDQYEVTRTVKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAP 329

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD++G  T EA  F G+    D N A+ + LDE+ +L+  
Sbjct: 330 GHGEDDFIIGQKYGLDVLCPVDEKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKL 388

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E   H YP+DWRTKKPTIFRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 389 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLDAIKETKWVP 435



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 120/187 (64%), Gaps = 2/187 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 589 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 647

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 648 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 707

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 708 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 767

Query: 730 VWQNLPF 736
           +W +L F
Sbjct: 768 LWSHLTF 774


>gi|221309417|ref|ZP_03591264.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221313742|ref|ZP_03595547.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221318666|ref|ZP_03599960.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221322939|ref|ZP_03604233.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|255767358|ref|NP_389426.2| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|402775788|ref|YP_006629732.1| isoleucyl-tRNA synthetase [Bacillus subtilis QB928]
 gi|452914523|ref|ZP_21963150.1| isoleucine--tRNA ligase [Bacillus subtilis MB73/2]
 gi|239938843|sp|Q45477.3|SYI_BACSU RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|225184985|emb|CAB13417.2| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|402480971|gb|AFQ57480.1| Isoleucyl-tRNA synthetase [Bacillus subtilis QB928]
 gi|407958950|dbj|BAM52190.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|407964527|dbj|BAM57766.1| isoleucyl-tRNA synthetase [Bacillus subtilis BEST7003]
 gi|452116943|gb|EME07338.1| isoleucine--tRNA ligase [Bacillus subtilis MB73/2]
          Length = 921

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/467 (45%), Positives = 293/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +K T+ +PKT F MR N   REP+I K W++  ++  V ++  D   FVLHDGPPYANG+
Sbjct: 3   FKDTLLMPKTDFPMRGNLPNREPDIQKKWEEEDIYRLVQERTKDRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++   + +K+++ ++ 
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKNKKVN-RKEMSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q   FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEEYAWKQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L        + +WTT
Sbjct: 182 KPVNWSPSSESALAEAEIEYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L+Y+V+ +     G+                       +VAS L
Sbjct: 234 TPWTIPANLGISVHPDLEYSVIAV-----GEDR--------------------FVVASAL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  + +  G  +  + +T+ G DLEN    HP+  R   V++ G+++TT++GTG VHTAP
Sbjct: 269 VENVASACGFDQYEVTRTVKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD++G  T EA  F G+    D N A+ + LDE+ +L+  
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E   H YP+DWRTKKPTIFRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 120/187 (64%), Gaps = 2/187 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 730 VWQNLPF 736
           +W +L F
Sbjct: 766 LWSHLTF 772


>gi|121535254|ref|ZP_01667068.1| isoleucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121306139|gb|EAX47067.1| isoleucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 930

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/467 (45%), Positives = 295/467 (63%), Gaps = 33/467 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  T++LP+T F MRAN   REP+  + W  ++++ +   K  G+  FVLHDGPPYANGN
Sbjct: 3   YSKTLNLPQTDFPMRANLPEREPQFLEYWTKNRIYEKKISKAKGKPKFVLHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G ALNKILKDII +YK L+ Y   YVPGWD HGLPIE   ++ L  + + +L P  L
Sbjct: 63  IHIGTALNKILKDIIVKYKSLRGYDAPYVPGWDTHGLPIEHAAIKILGLN-RHELNPLDL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  ++A   +  Q   FKR GV  DW+NPY+TL PEYEA QIEVFG+M+ +GYIY+G 
Sbjct: 122 RRQCKEYALKCLDMQREDFKRLGVSGDWDNPYITLTPEYEAKQIEVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTS-GLLNEFLPDLGLAVWT 343
           K V+W  S  TALAEAE+EY E   S +IY  F ++    S   G+ +E    +   +WT
Sbjct: 182 KSVYWCTSCETALAEAEIEYAEKK-SHAIYVKFPLIDDKGSLPVGIKHE---GVYAVIWT 237

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+AVN + +YA V++ +                        +++++ +  
Sbjct: 238 TTPWTIPANVAIAVNPEFEYAWVQVNN------------------------EIYLLASGL 273

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           +   ++A       I  T+ G  LE   + HP  +R+  VV+ GD++T E GTG VHTAP
Sbjct: 274 IDAVVKANGLGDYTILATVKGEALEGMVFGHPFLDRES-VVVLGDHVTLEQGTGCVHTAP 332

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHGQED+   +KY LP+++PVD  G+FT E GKF+G+ ++ D NV ++K L E+  L+ +
Sbjct: 333 GHGQEDFEIGMKYNLPVINPVDHSGRFTAEGGKFAGM-LVHDANVPIIKELAERNMLLGK 391

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H+Y + WR K P I+RATEQWFASVEGFRQ A++AI +V+WVP
Sbjct: 392 GTIRHQYAHCWRCKNPIIYRATEQWFASVEGFRQMALEAIKEVEWVP 438



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 81/206 (39%), Positives = 125/206 (60%), Gaps = 9/206 (4%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  + PQE    YGAD+LRLWV+S DY  D+ I   +L+QM+++YR
Sbjct: 594 VDGEGRKMSKSIGNV--IYPQEVIKQYGADILRLWVASADYKADIRISNDILKQMAEVYR 651

Query: 611 KLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T RYL+GNL D+    + + YD L  +D++AL +LE + + + ++Y+ Y+F  ++ 
Sbjct: 652 KIRNTFRYLIGNLADFDPDRDCVGYDQLTELDRWALLRLERVRERVTKAYDEYEFHLLYH 711

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  VDLS  Y D+ KDRLYT    +  RR+ QT +   L ++V ++APIL   AE+
Sbjct: 712 TVHNFCAVDLSAIYLDILKDRLYTAVPHAIERRAAQTAMYEILQTLVVMLAPILTFTAEE 771

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKWP 755
           VWQ +P     +     E V  ++WP
Sbjct: 772 VWQYMP-----KRAGMPESVHLAEWP 792


>gi|338813358|ref|ZP_08625487.1| isoleucyl-tRNA synthetase [Acetonema longum DSM 6540]
 gi|337274717|gb|EGO63225.1| isoleucyl-tRNA synthetase [Acetonema longum DSM 6540]
          Length = 935

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 223/470 (47%), Positives = 293/470 (62%), Gaps = 39/470 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           Y ++++LP+T F MRAN   REP++ + W   +++ R      G+  FVLHDGPPYANGN
Sbjct: 9   YSNSLNLPQTEFPMRANLPEREPQMLEKWQSERIYERKIKAFQGKKKFVLHDGPPYANGN 68

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G ALNKILKDII +YK LQ Y   YVPGWD HGLPIE   ++ L  + +  L P  L
Sbjct: 69  IHIGTALNKILKDIIVKYKSLQGYDAPYVPGWDTHGLPIEHAAIKILGLN-RHQLNPLDL 127

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   +  Q   F+R GV  DW NPY+TL P YEA QIEVFG M+ +GYIY+G 
Sbjct: 128 RRKCQEYALQCLDMQRQDFQRLGVSGDWENPYVTLKPAYEAEQIEVFGTMAKKGYIYKGL 187

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGL--AVW 342
           K V+W PS  TALAEAE+EY E   S +IY  F +     +  G L   L D  +   +W
Sbjct: 188 KSVYWCPSCETALAEAEIEYAEKK-SHAIYVKFPL----ENDRGKLPAALKDKKVFAVIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+AV+ +L+Y+ VE+                         ++V+++ AS
Sbjct: 243 TTTPWTMPANVAIAVHPELEYSWVEV------------------------NQEVYLL-AS 277

Query: 403 DLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
            LV ++     W T  V+ +T  GS LE   + HP  NR   +VI GD++T E GTG VH
Sbjct: 278 GLVDSVAKTNHWETYTVL-ETQTGSQLEGMEFSHPFINR-LSLVILGDHVTLEQGTGCVH 335

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHGQED+    KYGLPI++PVD  GKFT E GKF GL V  D NV V+K L E+  L
Sbjct: 336 TAPGHGQEDFEVGRKYGLPIINPVDPSGKFTAEGGKFQGLSV-EDANVPVIKELAEKGML 394

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           + +   +H+Y + WR K P I+RATEQWFASV GFR+ A++AI  V+W+P
Sbjct: 395 LGKGSVKHQYAHCWRCKNPIIYRATEQWFASVAGFREQALEAIKNVQWIP 444



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 118/187 (63%), Gaps = 7/187 (3%)

Query: 571 PQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           PQE    YGAD+LRLWV+S DY  D+ I   +L+QM+++YRK+R T RY+LGNL+D+   
Sbjct: 617 PQEVIKQYGADILRLWVASADYKADIRISNDILKQMAEVYRKIRNTFRYILGNLYDFDPD 676

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + + Y  L  +D++AL +LE + + + ++Y+ Y+F ++F  +  F  +DLS+ Y D+ K
Sbjct: 677 RHQVEYSRLTELDRWALLRLEQVRQKVTKAYDEYEFHQLFHAVHNFCTIDLSSIYLDILK 736

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 748
           DRLY     S  RR+ QT +   L+++V +++P+L   AE+VWQ +P    L D      
Sbjct: 737 DRLYASLPDSLERRAAQTAMYEILVNLVAMLSPVLTFTAEEVWQYMPKTKDLPDS----- 791

Query: 749 VFESKWP 755
           V  ++WP
Sbjct: 792 VQLAQWP 798


>gi|449094236|ref|YP_007426727.1| isoleucyl-tRNA synthetase [Bacillus subtilis XF-1]
 gi|449028151|gb|AGE63390.1| isoleucyl-tRNA synthetase [Bacillus subtilis XF-1]
          Length = 923

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/467 (45%), Positives = 293/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +K T+ +PKT F MR N   REP+I K W++  ++  V ++  D   FVLHDGPPYANG+
Sbjct: 5   FKDTLLMPKTDFPMRGNLPNREPDIQKKWEEEDIYRLVQERTKDRPKFVLHDGPPYANGD 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++   + +K+++ ++ 
Sbjct: 65  IHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKNKKVN-RKEMSVAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q   FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G 
Sbjct: 124 RKLCEEYAWKQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGL 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L        + +WTT
Sbjct: 184 KPVNWSPSSESALAEAEIEYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTT 235

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L+Y+V+ +     G+                       +VAS L
Sbjct: 236 TPWTIPANLGISVHPDLEYSVIAV-----GEDR--------------------FVVASAL 270

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  + +  G  +  + +T+ G DLEN    HP+  R   V++ G+++TT++GTG VHTAP
Sbjct: 271 VENVASACGFDQYEVTRTVKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAP 329

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD++G  T EA  F G+    D N A+ + LDE+ +L+  
Sbjct: 330 GHGEDDFIIGQKYGLDVLCPVDEKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKL 388

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E   H YP+DWRTKKPTIFRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 389 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLDAIKETKWVP 435



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 120/187 (64%), Gaps = 2/187 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 589 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 647

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 648 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 707

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 708 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 767

Query: 730 VWQNLPF 736
           +W +L F
Sbjct: 768 LWSHLTF 774


>gi|421873605|ref|ZP_16305217.1| isoleucyl-tRNA synthetase [Brevibacillus laterosporus GI-9]
 gi|372457392|emb|CCF14766.1| isoleucyl-tRNA synthetase [Brevibacillus laterosporus GI-9]
          Length = 928

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/467 (45%), Positives = 293/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           Y  T++LPKT F MR N  VREPE+   W++  ++ +V ++  D  +F+LHDGPPYANG+
Sbjct: 5   YGKTLNLPKTEFPMRGNLPVREPEVEARWEEMDIYKQVLERTKDRPSFILHDGPPYANGD 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH+LNK LKDII RYK +  +   Y+PGWD HGLPIE  ++ +   D ++++  +  
Sbjct: 65  IHIGHSLNKTLKDIIVRYKSMAGFYAPYIPGWDTHGLPIEQAIVNAQKLD-RRNIEVNDF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  ++A   V  Q   FKR G+  DW NPY+TL PEYEAAQI VFG M+ +GYIY+G 
Sbjct: 124 RKRCEEYAWGYVNKQRDQFKRLGIRGDWENPYVTLLPEYEAAQIRVFGAMATKGYIYKGL 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           + V+WSPSS TALA+AE+EY +   S SIY  F +        G L++   D G+ +WTT
Sbjct: 184 RCVYWSPSSETALADAEIEYHDKR-SASIYVRFMVKDG----KGKLDQ---DTGVIIWTT 235

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+++N  L+Y+VV           A  NK                +VAS L
Sbjct: 236 TPWTLPANKAISLNPDLEYSVV----------LADGNK---------------YLVASGL 270

Query: 405 VPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V ++  + G + V   +T  G+DLE     HP  +R  P+++ GD++T ++GTG VHTAP
Sbjct: 271 VESVTKEIGWEQVETVQTFKGTDLEGIETQHPFYDRISPIIL-GDHVTLDAGTGCVHTAP 329

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D+  S KY + +L PVD EGK T+EA  F GL    D N  V + L E  +L+  
Sbjct: 330 GHGEDDFNVSKKYNIEVLCPVDHEGKMTQEAPGFEGL-FYEDANKVVSEKLKENGALLKL 388

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H YP+DWRTKKP IFRATEQWFASVEGFR   ++AI +VKW P
Sbjct: 389 SFITHSYPHDWRTKKPIIFRATEQWFASVEGFRSQMLEAIKEVKWTP 435



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 112/168 (66%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GAD+LRLWVSSVDY  D  I   +L Q +++YRK+R T R+LLGNL  +  
Sbjct: 606 VPKEVTDKLGADILRLWVSSVDYQSDHRISDAILAQNAEVYRKIRNTFRFLLGNLAGFDP 665

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
           + + + YD LP +D++ L +   +VK  R++Y+ YQF  ++Q +  F  ++LS+FY D++
Sbjct: 666 MKDRVEYDRLPELDRFMLAKAAEMVKRTRKAYDEYQFHTVYQTVHNFCTIELSSFYMDIS 725

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KDRLY     S  RR+ QTV+   LL +V++++PI+PH A++VWQ +P
Sbjct: 726 KDRLYVEAPDSEERRAAQTVMYDILLDLVKLLSPIIPHTADEVWQFIP 773


>gi|383787394|ref|YP_005471963.1| isoleucyl-tRNA synthetase [Fervidobacterium pennivorans DSM 9078]
 gi|403314392|sp|Q9XDB4.3|SYI_FERPD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|383110241|gb|AFG35844.1| Isoleucyl-tRNA synthetase [Fervidobacterium pennivorans DSM 9078]
          Length = 912

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 219/529 (41%), Positives = 309/529 (58%), Gaps = 62/529 (11%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVAD-KNDGENFVLHDGPPYANGN 164
           YK T++LP+T F M+AN + +EPE+ K W++ +++ +  + + +   ++LHDGPPYANG+
Sbjct: 3   YKATLNLPQTNFQMKANLVNKEPEMLKFWEEKEIYKKTLETRANAPTYLLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A+NKILKD + RYK ++ Y+V +VPGWD HGLPIE +V  SL E+AKK  +P+++
Sbjct: 63  IHLGTAMNKILKDFVTRYKTMRGYRVPFVPGWDTHGLPIEHRVTTSLGEEAKKK-SPAEI 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    +FA   V  Q   FKR GV  DW +PY+TLDP+YE   ++VF  +   G +YRG 
Sbjct: 122 RKLCKEFALKYVDIQREEFKRLGVKGDWEHPYITLDPDYEYHILDVFKTLVENGNVYRGN 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W P+ RTALAEAE+EY + H S SIY  F+MV              PD  + +WTT
Sbjct: 182 KPVYWCPTCRTALAEAEIEYHD-HESPSIYVKFQMVDK------------PDTYIVIWTT 228

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+A++    Y  +++                          + + IVA  L
Sbjct: 229 TPWTIPANVAIALHPDYTYVKIKVD-------------------------EEYWIVAEGL 263

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           +    A  G    + +   G +LE     HP+ +R   VV+  DY+T E GTG VHTAPG
Sbjct: 264 LQKFAADVGIDFEVVEKFVGKELEGKLTKHPLYDRTS-VVVLADYVTLEDGTGCVHTAPG 322

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG+EDY T LKY LP+LSPVDDEG+FT+EAGK+ GL +  D N  +V+ L    SLI   
Sbjct: 323 HGEEDYQTGLKYNLPVLSPVDDEGRFTKEAGKYEGLKIW-DANKVIVEDLKNNGSLIKAG 381

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPP----------Q 572
              H YP+ WR K P +FRAT QWF SV+    R   ++ I +VKW P           Q
Sbjct: 382 KISHSYPHCWRCKGPVMFRATPQWFISVDKNNLRGKVLEEIKKVKWYPAWGETRITAMVQ 441

Query: 573 EAPGYGADVLRLW------VSSVDYTGDVMIGPQVLRQMSDIYRKLRGT 615
           E P +     R+W      V   D  G+V + P+V+   ++I ++ +GT
Sbjct: 442 ERPDWTISRQRVWGVPIPAVKCKD-CGEVTLEPKVIEHFANIVKE-KGT 488



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 104/163 (63%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +    YGAD+LRLWV+S D+  ++ +G  ++ Q  ++YRKLR TLRYLL NL+D+   
Sbjct: 601 PMEIVNKYGADILRLWVASTDFFDNIRVGKNIIEQQVEVYRKLRNTLRYLLSNLYDFTEA 660

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
           + + Y+ L  +D++AL +L+  ++ I + YE +++ K++    ++   +LS  Y D+ KD
Sbjct: 661 DLLPYEKLLPLDKWALGRLQKFIEQITQYYEGFEYSKVYNATVKYCTTELSAVYLDILKD 720

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQ 732
           RLY     S  RRS QT L   L ++++++API+P  AE+ +Q
Sbjct: 721 RLYVEAKDSIYRRSAQTALHYILEALIKILAPIIPFTAEEAYQ 763


>gi|428279138|ref|YP_005560873.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
 gi|291484095|dbj|BAI85170.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 921

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/467 (45%), Positives = 293/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +K T+ +PKT F MR N   REP+I K W++  ++  V ++  D   FVLHDGPPYANG+
Sbjct: 3   FKDTLLMPKTDFPMRGNLPNREPDIQKKWEEEDIYRLVQERTKDRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++   + +K+++ ++ 
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKNKKVN-RKEMSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q   FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEEYAWKQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L        + +WTT
Sbjct: 182 KPVNWSPSSESALAEAEIEYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L+Y+V+ +     G+                       +VAS L
Sbjct: 234 TPWTIPANLGISVHPDLEYSVIAV-----GEDR--------------------FVVASAL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  + +  G  +  + +T+ G DLEN    HP+  R   V++ G+++TT++GTG VHTAP
Sbjct: 269 VENVASACGFDQYEVTRTVKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD++G  T EA  F G+    D N A+ + LDE+ +L+  
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E   H YP+DWRTKKPTIFRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 120/187 (64%), Gaps = 2/187 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 730 VWQNLPF 736
           +W +L F
Sbjct: 766 LWSHLTF 772


>gi|348674400|gb|EGZ14219.1| hypothetical protein PHYSODRAFT_511967 [Phytophthora sojae]
          Length = 1059

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 220/485 (45%), Positives = 296/485 (61%), Gaps = 41/485 (8%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLH 166
           + T++LP T F MRANA  REP++H          + AD++    FVLHDGPP+ANG+LH
Sbjct: 15  RQTLNLPATRFPMRANAAAREPQLHARCVSAAYAEQAADESR-PLFVLHDGPPFANGSLH 73

Query: 167 MGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRA 226
           MGH LNK LKD+INRY+LL+  +VRYVPGWDCHGLPIE K L  L  +A KDL+P+++RA
Sbjct: 74  MGHFLNKTLKDVINRYQLLRGRRVRYVPGWDCHGLPIEHKALTLLQLEA-KDLSPAQVRA 132

Query: 227 KAAKFAKATVKAQMASFKRYGVWADWNNP-----YLTLDPEYEAAQIEVFGQMSLQGYIY 281
            + + A+  V+ Q   F+R+GV ADW+       YLT+ PEYEA Q +V  +M   G I+
Sbjct: 133 LSRQLARKAVQEQQKDFERWGVLADWSGADAESVYLTMAPEYEARQYDVLKKMVHDGLIF 192

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVS----APPSTSGLLNEFLPDL 337
           RG KPV+WSPSSRTALAEAELEY + HVS++ Y  FR  S    A    + +L ++   L
Sbjct: 193 RGFKPVYWSPSSRTALAEAELEYQDDHVSQAAYVKFRFASMGSNASKEMASVLEKYGDKL 252

Query: 338 GLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVF 397
              VWTTTPWT+P+N A+ VNA+L Y VV                  RP     D   + 
Sbjct: 253 SAVVWTTTPWTIPSNQALCVNAELDYVVV------------------RPRGADSDACYLI 294

Query: 398 IIVASDLVPTL---EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
                +   T+   +A+   +L + +TL G+DLE   + HP+ NR   VV+ G+++TT++
Sbjct: 295 ASALQESFATMLKGDAETDVELEVLETLKGADLEGAHFTHPLVNRDA-VVLVGEHVTTDA 353

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLP------ILSPVDDEGKFTEEAGK-FSGLDVLGDGN 507
           GTG+VHTAPGHGQ+DY   + +         IL PVD +G FT EAG+   GL V+G+GN
Sbjct: 354 GTGVVHTAPGHGQDDYFAWMAHHSKPGEHPDILCPVDADGCFTAEAGQGLQGLSVVGEGN 413

Query: 508 VAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQV 566
            AV+  L    +L+    Y H+YPYDWRTK+P I RAT QWFA ++         +   V
Sbjct: 414 TAVIDLLKSSGNLLSINEYHHRYPYDWRTKQPVILRATAQWFARLDALHARGKRVLEDSV 473

Query: 567 KWVPP 571
           + VPP
Sbjct: 474 QMVPP 478



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/201 (39%), Positives = 117/201 (58%), Gaps = 7/201 (3%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           V   + P YG DVLR WV++ DYTGDV IGP V+ + SD  RK+R T R+LLGNL D+  
Sbjct: 702 VKQMKVPAYGVDVLRFWVATTDYTGDVSIGPGVVGKASDALRKVRNTARFLLGNLQDFDP 761

Query: 628 VGNSISYDDLPM-IDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
             +++ +D +   +D+Y L +L ++ +++  +Y+++ F +    +  FI  DLS FY + 
Sbjct: 762 AQHAVPHDKMQFSLDRYMLHELNSLAESVTAAYDAFAFNRAQHALSHFISTDLSAFYMEA 821

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV---W-QNLPFAYTLED 742
            KDRLY     S TRRS QTVL   L ++ R +AP++PH AED+   W   L     LE+
Sbjct: 822 TKDRLYCDAADSQTRRSAQTVLWLSLQALTRALAPVVPHTAEDIRLHWVSQLQGEIPLEE 881

Query: 743 GSAAEFVFESKWPVLDEKWRT 763
              + F  E  W    E+W+ 
Sbjct: 882 VPGSVF-LEEGWMPSAEQWKN 901


>gi|330792100|ref|XP_003284128.1| hypothetical protein DICPUDRAFT_75115 [Dictyostelium purpureum]
 gi|325085942|gb|EGC39340.1| hypothetical protein DICPUDRAFT_75115 [Dictyostelium purpureum]
          Length = 1010

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 219/500 (43%), Positives = 300/500 (60%), Gaps = 50/500 (10%)

Query: 95  AAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVL 154
           ++  + ++   Y  T+ LPKT F M+ANA + EP + K  D  +++    + N+   +V 
Sbjct: 28  SSNNKDEKNHSYSGTLHLPKTKFQMKANAAINEPLLLK--DPTELYKWQLENNNNGEWVF 85

Query: 155 HDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDED 214
           HDGPPYANG LH+GHALNK LKDI+NRYK+L+ +KV Y+PGWDCHGLPIE KV QS +  
Sbjct: 86  HDGPPYANGPLHLGHALNKTLKDIVNRYKVLRGFKVNYIPGWDCHGLPIEQKVFQSFE-- 143

Query: 215 AKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQM 274
             + L P  +R  A K+A   ++ Q   F   G+  DW NPY T+DP+YE  QI+ F +M
Sbjct: 144 TTQGLKPHTIRDAARKYALKEIERQKKGFLELGIMGDWKNPYRTMDPQYEVQQIQTFYEM 203

Query: 275 SLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL 334
             +G IYRG+KPV+WSPSSR+ALAEAE+EY + HVS+SI+  F +     S   L +  L
Sbjct: 204 YQKGNIYRGEKPVYWSPSSRSALAEAEIEYNDAHVSKSIFVKFNVEKFSDS---LKSTVL 260

Query: 335 PDLG-------------LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPAN 381
            DL                +WTTTPWT+P+N A++V+  ++Y +V             AN
Sbjct: 261 SDLSSQYFTEENGRKCYALIWTTTPWTIPSNLAISVHPTMEYIIV-----------TNAN 309

Query: 382 KKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGT-KLVIKKTLAGSDLENCRYVHPVDNRQ 440
           K           KK   I++ +   +L+A     +L+I K   G  L+     HP  +R 
Sbjct: 310 K-----------KKDHYIISKERFESLKAILNDPELIIVKEFTGEQLKGTVTRHPQKDRI 358

Query: 441 CPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL-----PILSPVDDEGKFTEEAG 495
            P +I GD++   SGTGLVHTAPGHG ED+    +Y       PILSPVD+ G FT +AG
Sbjct: 359 SP-IICGDHVVEGSGTGLVHTAPGHGFEDFQVWNEYNNNEVSGPILSPVDESGCFTADAG 417

Query: 496 K-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG 554
           K F GL+VL +GN AV+K L ++ +L+  E Y HKYPYDWRTKKP + R T+QWFAS++ 
Sbjct: 418 KEFEGLNVLIEGNQAVIKDLQDKNALLFIEEYTHKYPYDWRTKKPILIRVTKQWFASLKS 477

Query: 555 FRQAAMDAIGQVKWVPPQEA 574
            ++ A+D I  V  VP   A
Sbjct: 478 IQEKAVDCISNVNMVPASGA 497



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 123/223 (55%), Gaps = 9/223 (4%)

Query: 573 EAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNS 631
           + P YG D+LR W++S DYT D+ IGP +L ++ +  +K+R + +++LG+  D+    +S
Sbjct: 677 QDPAYGIDILRTWIASSDYTKDISIGPNILVKILENIKKIRNSFKFMLGSNFDFNPATDS 736

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + YD + +ID+YAL + + + K++   Y+++QF K+   +  F   + S FYF++ K RL
Sbjct: 737 VPYDQMSLIDKYALHKAQALQKSVTNHYDNFQFQKVLSDVLNF-TGETSAFYFEIIKQRL 795

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           Y     S  R+S QT L   +  I + +API  H +ED+++N    Y        + VF 
Sbjct: 796 YIEKANSQLRKSSQTALFQIVEVINKALAPITIHTSEDIYKN---QYHF--SKPTDSVFT 850

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNETEGFSSF 794
             W VL ++++   + E +    I+ V  +V  + +T     F
Sbjct: 851 QGWTVLPQEYQNDNINEQF--NHIMTVRTLVNKVLQTMRIDGF 891


>gi|418576427|ref|ZP_13140573.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus KACC 16562]
 gi|379325489|gb|EHY92621.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus KACC 16562]
          Length = 916

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/469 (45%), Positives = 292/469 (62%), Gaps = 45/469 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD   ++ +V DKN+G  +F+LHDGPPYANGN
Sbjct: 3   YKDTLLMPKTDFPMRGGLPNKEPKIQEEWDAKNIYQKVLDKNEGNPSFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           LHMGHALNKILKDII RYK ++ Y   YVPGWD HGLPIE    Q+L +    +K+L+ +
Sbjct: 63  LHMGHALNKILKDIITRYKSMRGYYAPYVPGWDTHGLPIE----QALTKKGVKRKELSIA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R K   FA   +  Q   FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+
Sbjct: 119 EFRKKCEAFALEQIDNQKKDFKRLGVKGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           GKKPV+WSPSS ++LAEAE+EY +   S SIY  F ++       G++++   D    +W
Sbjct: 179 GKKPVYWSPSSESSLAEAEIEYQDKR-SPSIYVAFDVIDG----KGIVDD---DAQFIIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII--- 399
           TTTPWT+P+N A+ V+  L Y    +                          K +II   
Sbjct: 231 TTTPWTLPSNVAITVHPDLTYGQYNVNG------------------------KKYIIGKD 266

Query: 400 VASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           +ASD+   L+    T L ++K   G DLE  +  HP  +R+  +VI G ++TT++GTG V
Sbjct: 267 LASDVAEALDWDEDT-LELEKEFKGKDLEYIKAQHPFFDRES-LVINGLHVTTDAGTGCV 324

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++DY+   KY LP++SPVDD+G FT+EAG+F G+      N  +   L E  S
Sbjct: 325 HTAPGHGEDDYIVGQKYNLPVISPVDDKGVFTDEAGQFEGM-FYDKANKEITDLLKEDGS 383

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
           L+  E   H YP+DWRTKKP IFRAT QWFAS++  R+  + AI   ++
Sbjct: 384 LLKLEFITHSYPHDWRTKKPVIFRATPQWFASIDKVREDILSAIDDTQF 432



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 77/168 (45%), Positives = 109/168 (64%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP Q     GAD+ RLWVSSVDY  DV I  ++L+Q SD+YRK+R TLR++LGN+ D+  
Sbjct: 605 VPDQIVKQKGADIARLWVSSVDYLADVRISDEILKQSSDVYRKIRNTLRFMLGNVSDYNP 664

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++I+  DL  +D+Y L +L     N  + Y++Y +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 ATDAIAEKDLLEVDKYILNRLREFTANTLDHYDNYDYLDIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY     S  RRS QTVL   ++ + +++APIL H AE+VW ++P
Sbjct: 725 KDILYIEERDSHKRRSMQTVLYQIVVDMTKLLAPILVHTAEEVWSHIP 772


>gi|398304129|ref|ZP_10507715.1| isoleucyl-tRNA ligase [Bacillus vallismortis DV1-F-3]
          Length = 921

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/469 (45%), Positives = 294/469 (62%), Gaps = 42/469 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +K T+ +PKT F MR N   REP++ K W++  ++  V ++  D   FVLHDGPPYANG+
Sbjct: 3   FKDTLLMPKTDFPMRGNLPNREPDMQKKWEEEDIYRLVQERTKDRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++   + +K+++ ++ 
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKNKKVN-RKEMSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q   FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEEYAWKQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG--LAVW 342
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L     D G  + +W
Sbjct: 182 KPVNWSPSSESALAEAEIEYQDKR-SASIYVAFGVKDG----KGVL-----DSGERIIIW 231

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  ++V+  L+Y+V+ +     G+                       +VAS
Sbjct: 232 TTTPWTIPANLGISVHPDLEYSVIAV-----GEDR--------------------FVVAS 266

Query: 403 DLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            LV  + +  G  +  + +T+ G DLEN    HP+  R   V++ G+++TT++GTG VHT
Sbjct: 267 ALVENVASACGFDQYEVTRTIKGKDLENIVAEHPLYGRDSLVML-GEHVTTDAGTGCVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++D++   KYGL +L PVD +G  T EA  F G+    D N A+ + LDE+ +L+
Sbjct: 326 APGHGEDDFIIGQKYGLDVLCPVDAKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALV 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             E   H YP+DWRTKKPTIFRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 385 KLEFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 120/187 (64%), Gaps = 2/187 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 730 VWQNLPF 736
           +W +L F
Sbjct: 766 LWAHLAF 772


>gi|222100204|ref|YP_002534772.1| isoleucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254782448|sp|B9K8X3.1|SYI_THENN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|221572594|gb|ACM23406.1| Isoleucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 918

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 219/527 (41%), Positives = 313/527 (59%), Gaps = 62/527 (11%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK+T++LPKT+F MRAN + +E    K W++  ++  V ++  G+  FVLHDGPPYANG+
Sbjct: 3   YKNTLNLPKTSFPMRANLVNKEKAFLKEWEEMDLYNYVLEQRKGKPLFVLHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G ALNKILKDI+ +YK ++ Y+  YVPGWD HGLPIE +V Q L  D  K+++P+++
Sbjct: 63  IHIGTALNKILKDIVVKYKTMRGYRAPYVPGWDTHGLPIEHRVSQELG-DRIKEMSPAEI 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   V+ Q   FKR GV  DWNNPY+TL P+YE   ++VF  +  QG +YR  
Sbjct: 122 RKKCEEFALKFVEIQKEEFKRLGVRGDWNNPYITLKPDYEVKILDVFKTLVEQGNVYRSL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KP++W P  RTALAEAE+EY + H S SIY  FR                P+L + +WTT
Sbjct: 182 KPIYWCPRCRTALAEAEIEYHD-HRSPSIYVKFRSKDD------------PNLYIVIWTT 228

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  +A++   +Y+VV++     GD                       ++A+DL
Sbjct: 229 TPWTLPANVGIALHPDFEYSVVKV-----GDERW--------------------VIATDL 263

Query: 405 VPTLEAKWGTKL--VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           + T   + G     V++K + G DLE   + HP+   +   VI  DY++ E+GTG VH A
Sbjct: 264 LETFSRETGVDCSEVVEK-IRGKDLEGKEFQHPIFEDKTSRVILADYVSLETGTGCVHIA 322

Query: 463 PGHGQEDYVTS-LKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PGHG+EDYV   +KYGLPI+SPVD+EG+FT+EAGK+ G+  + D N  +++ L E+  L+
Sbjct: 323 PGHGEEDYVYGHVKYGLPIVSPVDEEGRFTDEAGKYRGM-FIEDSNRVIIEDLKEKGILV 381

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPP-------- 571
                 H YP+ WR K P IFRATEQWF SV+    RQ  ++ I +VKW+P         
Sbjct: 382 HASTITHSYPHCWRCKGPVIFRATEQWFISVDHNNLRQRVLEEIDRVKWIPEWGRNRIRS 441

Query: 572 --QEAPGYGADVLRLWVSSV-----DYTGDVMIGPQVLRQMSDIYRK 611
             +E P +     R+W + +        G+V + P+V+     I  K
Sbjct: 442 MVEERPDWCISRQRVWGTPIPAVKCKECGEVTLDPKVIEHFMKIVEK 488



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 110/166 (66%), Gaps = 1/166 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +    YGA++LRLW++S DY  D+ I  +++ Q +++Y+K+R T R+LLGNL D+   
Sbjct: 604 PMEVVEKYGAEILRLWLASSDYFNDIKISMRIVEQQTEVYKKIRNTFRFLLGNLEDFDPE 663

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + + Y+ L  ID++AL +L+ I+K   E Y+SY+F K++ ++ ++   +LS+ Y DV K
Sbjct: 664 LDRVPYEKLLTIDKWALGRLQEIIKRATEYYDSYEFSKVYNLVVKYCTTELSSLYLDVVK 723

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           DRLY     S  RRS QTV+   L+++++++API+    E+V+ +L
Sbjct: 724 DRLYVEAKDSLYRRSAQTVMHEILIALMKILAPIMTFTMEEVYSHL 769


>gi|157692223|ref|YP_001486685.1| isoleucyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157680981|gb|ABV62125.1| isoleucine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 921

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 209/467 (44%), Positives = 296/467 (63%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   +EPEI + W +  ++  V ++  G   F+LHDGPPYANG+
Sbjct: 3   YKDTLLMPKTEFPMRGNLPNKEPEIQEEWAEKDIYQMVLERTKGRPTFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I R+K +  +   YVPGWD HGLPIE  + ++  +  +K+++ ++ 
Sbjct: 63  IHMGHALNKILKDFIVRFKSMNGFHAPYVPGWDTHGLPIETALTKN-KKVKRKEMSTAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q   FKR GV ADW+NPY+TL PEYEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEEYAWKQIEGQRNQFKRLGVRADWDNPYVTLKPEYEAQQILVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F++        G+L     D    +WTT
Sbjct: 182 KPVNWSPSSESALAEAEIEYKDKR-SPSIYVSFKVKDG----KGVLEN---DEQFIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  + V+  L+Y+V+++ +                            +VAS+L
Sbjct: 234 TPWTLPANLGICVHPNLEYSVLQVGAER-------------------------YVVASEL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  +    G  +  + KTL G +L+N    HP+  R   V++ GD++TT++GTG VHTAP
Sbjct: 269 VEQVAKTLGFEEYEVVKTLKGKELDNVVAEHPIYGRDSLVML-GDHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++ S+KYGL +L PVD++G  TEEA  F GL    D N A+ + L+ + +L   
Sbjct: 328 GHGEDDFIVSMKYGLDVLCPVDEKGVMTEEAPGFEGL-FYEDANKAITEQLEAKGALKKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +   H YP+DWRTKKPTI+RAT QWFAS++ FR+A +D I + KWVP
Sbjct: 387 DFITHSYPHDWRTKKPTIYRATAQWFASIKDFREALLDNIKETKWVP 433



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 110/168 (65%), Gaps = 1/168 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 605 PTKVAKQLGAEILRLWVSSVNYQADHPVSDDILKQVAEVYRKIRNTFRFLHGNLFDFDPA 664

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            N++  ++L  +DQY L +L  +++ ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 665 VNAVPVEELREVDQYILIKLNKLIEKVKKAYDDYEFAVVYHAIHNFCTIELSSFYLDFAK 724

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           D +Y        RRS QTV    L+++V++ APILPH A+++W +L F
Sbjct: 725 DVVYIEHADHPDRRSMQTVFYETLMALVKLTAPILPHTADELWSHLSF 772


>gi|430755974|ref|YP_007209754.1| Isoleucyl-tRNA synthetase IleRS [Bacillus subtilis subsp. subtilis
           str. BSP1]
 gi|430020494|gb|AGA21100.1| Isoleucyl-tRNA synthetase IleRS [Bacillus subtilis subsp. subtilis
           str. BSP1]
          Length = 921

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 210/467 (44%), Positives = 293/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +K T+ +PKT F MR N   REP+I K W++  ++  V ++  D   FVLHDGPPYANG+
Sbjct: 3   FKDTLLMPKTDFPMRGNLPNREPDIQKKWEEEDIYRLVQERTKDRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++   + +K+++ ++ 
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKNKKVN-RKEMSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q   FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEEYAWKQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L        + +WTT
Sbjct: 182 KPVNWSPSSESALAEAEIEYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L+Y+V+ +     G+                       +VAS L
Sbjct: 234 TPWTIPANLGISVHPDLEYSVIAV-----GEDR--------------------FVVASAL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  + +  G  +  + +T+ G DLEN    HP+  R   V++ G+++TT++GTG VHTAP
Sbjct: 269 VENVASACGFDQYEVTRTVKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD++G  T EA  F G+    D N A+ + L+E+ +L+  
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGVMTSEAPGFEGM-FYDDANKAITQQLEEKGALVKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E   H YP+DWRTKKPTIFRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 120/187 (64%), Gaps = 2/187 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 730 VWQNLPF 736
           +W +L F
Sbjct: 766 LWSHLTF 772


>gi|350265856|ref|YP_004877163.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           TU-B-10]
 gi|349598743|gb|AEP86531.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           TU-B-10]
          Length = 921

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 211/467 (45%), Positives = 291/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +K T+ +PKT F MR N   REP+I K W+   ++  V ++  D   FVLHDGPPYANG+
Sbjct: 3   FKDTLLMPKTDFPMRGNLPNREPDIQKKWEGEDIYRLVQERTKDRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++   + +K+++ ++ 
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKNKKVN-RKEMSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q   FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEEYAWKQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L        + +WTT
Sbjct: 182 KPVNWSPSSESALAEAEIEYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L+Y+V+ +     G+                       +VAS L
Sbjct: 234 TPWTIPANLGISVHPDLEYSVIAV-----GEDR--------------------FVVASAL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  + +  G  +  + +T+ G DLEN    HP+  R   V++ G+++TT++GTG VHTAP
Sbjct: 269 VENVASACGFDQYEVTRTIKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD +G  T EA  F G+    D N A+ + LDE+ +L+  
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDAKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E   H YP+DWRTKKPTIFRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 120/187 (64%), Gaps = 2/187 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+L GNL D+    N+++ +DL  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 730 VWQNLPF 736
           +W +L F
Sbjct: 766 LWSHLTF 772


>gi|295706354|ref|YP_003599429.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804013|gb|ADF41079.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 921

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 213/468 (45%), Positives = 293/468 (62%), Gaps = 40/468 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REP++ + W +  ++ +V  + +G   FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTEFPMRGNLPNREPKMQEQWAEMNIYEKVQKRTEGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  +   YVPGWD HGLPIE  + ++   + +K++T ++ 
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGFCAPYVPGWDTHGLPIETALTKNKKVN-RKEMTVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   V  Q   FKR GV  DW+NPY+TL P+YEA QI+VFG M+ +GYIY+G 
Sbjct: 122 RKLCEQYAWEQVNGQREQFKRLGVRGDWDNPYVTLQPQYEAQQIKVFGDMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L +   D    +WTT
Sbjct: 182 KPVYWSPSSESALAEAEIEYYDKR-SASIYVAFNVKDG----KGVLEQ---DEKFIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  +AVN +LQY+VVE                        D+ K   +VA++L
Sbjct: 234 TPWTMPANQGIAVNPELQYSVVE-----------------------ADEAK--YVVATEL 268

Query: 405 VPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           + T+  E +W     + +T+ GS+LE     HP+  R   VV+ GD++TT++GTG VHTA
Sbjct: 269 IETVAKEIEWADYKTL-RTVKGSELERVVAEHPIYKRDSLVVL-GDHVTTDAGTGCVHTA 326

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KYGL +L PVD +G  T EA  F GL      N  +   L+E+ +L+ 
Sbjct: 327 PGHGEDDFIVGQKYGLEVLCPVDSKGHMTNEAPGFEGL-FYDKANKPITDKLEEEGALLK 385

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                H YP+DWRTKKPTIFRAT QWFAS++ FR+  + A+ + KWVP
Sbjct: 386 LSFITHSYPHDWRTKKPTIFRATAQWFASIKDFREDLLKAVEKTKWVP 433



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 114/168 (67%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           +P +     GAD+LRLWV+SVDY  DV +   +L+Q++++YRK+R T R+LLGNL D+  
Sbjct: 604 IPEKVMKQLGADILRLWVASVDYQADVRVSDNILKQVAEVYRKIRNTFRFLLGNLADFNP 663

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++ +DL  +D+Y L +L  ++  +++SY+SY+F  I+  +  F  +D+S+FY D A
Sbjct: 664 TTDAVAVEDLREVDRYMLVKLNKLIDKVKKSYDSYEFSSIYHAVHNFCTIDMSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY     +  RRS QTVL   LLS+ ++++PIL H A++VW ++P
Sbjct: 724 KDVLYIEAENNVERRSIQTVLYETLLSLTKLVSPILSHTADEVWVHIP 771


>gi|294501005|ref|YP_003564705.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294350942|gb|ADE71271.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 921

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 213/468 (45%), Positives = 292/468 (62%), Gaps = 40/468 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REP++ + W +  ++ +V  + +G   FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTEFPMRGNLPNREPKMQEQWAEMNIYEKVQKRTEGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  +   YVPGWD HGLPIE  + ++   + +K++T ++ 
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGFCAPYVPGWDTHGLPIETALTKNKKVN-RKEMTVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   V  Q   FKR GV  DW+NPY+TL P+YEA QI+VFG M+ +GYIY+G 
Sbjct: 122 RKLCEQYAWEQVNGQREQFKRLGVRGDWDNPYVTLQPQYEAQQIKVFGDMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L +   D    +WTT
Sbjct: 182 KPVYWSPSSESALAEAEIEYYDKR-SASIYVAFNVKDG----KGVLEQ---DEKFIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  +AVN +LQY+VVE       D A                     +VA++L
Sbjct: 234 TPWTMPANQGIAVNPELQYSVVE------ADGAK-------------------YVVATEL 268

Query: 405 VPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           + T+  E +W     ++ T+ GS+LE     HP+  R   VV+G D++TT++GTG VHTA
Sbjct: 269 IETVAKEIEWADYKTLR-TVKGSELERVVAEHPIYKRDSLVVLG-DHVTTDAGTGCVHTA 326

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KYGL +L PVD +G  T EA  F GL      N  +   L+E+ +L+ 
Sbjct: 327 PGHGEDDFIVGQKYGLEVLCPVDSKGHMTNEAPGFEGL-FYDKANKPITDKLEEEGALLK 385

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                H YP+DWRTKKPTIFRAT QWFAS++ FR+  + A+ + KWVP
Sbjct: 386 LSFITHSYPHDWRTKKPTIFRATAQWFASIKDFREDLLKAVEKTKWVP 433



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 114/168 (67%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           +P +     GAD+LRLWV+SVDY  DV +   +L+Q++++YRK+R T R+LLGNL D+  
Sbjct: 604 IPEKVMKQLGADILRLWVASVDYQADVRVSDNILKQVAEVYRKIRNTFRFLLGNLADFNP 663

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++ +DL  +D+Y L +L  ++  +++SY+SY+F  I+  +  F  +D+S+FY D A
Sbjct: 664 TTDAVAVEDLREVDRYMLVKLNKLIDKVKKSYDSYEFSSIYHAVHNFCTIDMSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY     +  RRS QTVL   LLS+ ++++PIL H A++VW ++P
Sbjct: 724 KDVLYIEAENNVERRSIQTVLYETLLSLTKLVSPILSHTADEVWVHIP 771


>gi|83589714|ref|YP_429723.1| isoleucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|123725741|sp|Q2RK59.1|SYI_MOOTA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|83572628|gb|ABC19180.1| Isoleucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 930

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/468 (45%), Positives = 298/468 (63%), Gaps = 39/468 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  T++LP+T F MRAN   REPEI K W+++ ++ +V + N G+  F+LHDGPPYANG+
Sbjct: 3   YSKTLNLPRTDFPMRANLPQREPEILKFWEENDIYGKVQEANRGKPKFILHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GH LNKILKDII +Y  +  Y   YVPGWD HGLPIE + +++L  + +  +   + 
Sbjct: 63  LHLGHTLNKILKDIIIKYHSMNGYDAPYVPGWDTHGLPIEQQAIKNLGLN-RHAVDVVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +   +A   V  Q   FKR GV  DW +PYLTL+PEYEA QI +FG+M+ +GYIY+G 
Sbjct: 122 RNRCRDYALKYVNIQREEFKRLGVRGDWEHPYLTLEPEYEAIQIGIFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP-DLGLAVWT 343
           KPV+W     TALAEAE+EY E   S SIY  F +  A     GL   F P    + +WT
Sbjct: 182 KPVYWCTDCETALAEAEVEYGEER-SPSIYVKFPVADA----RGL---FEPRGSSIVIWT 233

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+A++ + +Y ++++     G+                      +++A++
Sbjct: 234 TTPWTLPANVAIALHPEFKYVLIQV-----GEER--------------------LLMAAE 268

Query: 404 LV-PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV P LE        +  T  GS+LE     +P+ +R   VVI G+++T E GTG VHTA
Sbjct: 269 LVRPVLELLGVKDYQVVATFTGSELEGVVCRNPLMDRDS-VVILGEHVTLEQGTGCVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG EDY   ++Y LP+LSP+DD G+FTEE G+F+GL  + + N AVVK L+ + +L+ 
Sbjct: 328 PGHGLEDYEVGMRYHLPVLSPLDDRGRFTEEGGQFAGL-FIDEANKAVVKELEARGALLH 386

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               +H+YP+ WR K P IFRATEQWFAS+EGFRQ A++AI +VKW+P
Sbjct: 387 FGFIKHQYPHCWRCKHPIIFRATEQWFASIEGFRQEALEAIKKVKWIP 434



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 101/159 (63%), Gaps = 1/159 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GADVLRLWV+S DY  DV     ++RQ+++ YRK+R T R+LL NL D+  G + +  ++
Sbjct: 615 GADVLRLWVASADYRRDVAASENIMRQITEAYRKIRNTCRFLLANLADFDPGKDQVPREE 674

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +D++A+ +L+ ++  +  +Y+ Y+F  ++  I  F  VDLS  Y D+ KDRLYT   
Sbjct: 675 MLELDRWAMNRLQRLIARVTMAYDDYEFHVVYHTIHNFCAVDLSAVYLDIIKDRLYTWPA 734

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
            S  RRS QTVL   +  +VR++ PIL    E++W+ LP
Sbjct: 735 ASKGRRSAQTVLYETINVLVRLLTPILAFTTEEIWRYLP 773


>gi|73662887|ref|YP_301668.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|84029568|sp|Q49WX5.1|SYI_STAS1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|72495402|dbj|BAE18723.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 916

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/469 (45%), Positives = 291/469 (62%), Gaps = 45/469 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD   ++ +V DKN+G  +F+LHDGPPYANGN
Sbjct: 3   YKDTLLMPKTDFPMRGGLPNKEPKIQEEWDAKNIYQKVLDKNEGNPSFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           LHMGHALNKILKDII RYK +  Y   YVPGWD HGLPIE    Q+L +    +K+L+ +
Sbjct: 63  LHMGHALNKILKDIITRYKSMLGYYAPYVPGWDTHGLPIE----QALTKKGVKRKELSIA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R K   FA   +  Q   FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+
Sbjct: 119 EFRKKCEAFALEQIDNQKKDFKRLGVKGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           GKKPV+WSPSS ++LAEAE+EY +   S SIY  F ++       G++++   D    +W
Sbjct: 179 GKKPVYWSPSSESSLAEAEIEYQDKR-SPSIYVAFDVIDG----KGIVDD---DAQFIIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII--- 399
           TTTPWT+P+N A+ V+  L Y    +                          K +II   
Sbjct: 231 TTTPWTLPSNVAITVHPDLTYGQYNVNG------------------------KKYIIGKD 266

Query: 400 VASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           +ASD+   L+    T L ++K   G DLE  +  HP  +R+  +VI G ++TT++GTG V
Sbjct: 267 LASDVAEALDWDEDT-LELEKEFKGKDLEYIKAQHPFFDRES-LVINGLHVTTDAGTGCV 324

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++DY+   KY LP++SPVDD+G FT+EAG+F G+      N  +   L E  S
Sbjct: 325 HTAPGHGEDDYIVGQKYNLPVISPVDDKGVFTDEAGQFEGM-FYDKANKEITDLLKEDGS 383

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
           L+  E   H YP+DWRTKKP IFRAT QWFAS++  R+  + AI   ++
Sbjct: 384 LLKLEFITHSYPHDWRTKKPVIFRATPQWFASIDKVREDILSAIDDTQF 432



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 77/168 (45%), Positives = 109/168 (64%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP Q     GAD+ RLWVSSVDY  DV I  ++L+Q SD+YRK+R TLR++LGN+ D+  
Sbjct: 605 VPDQIVKQKGADIARLWVSSVDYLADVRISDEILKQSSDVYRKIRNTLRFMLGNVSDYNP 664

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++I+  DL  +D+Y L +L     N  + Y++Y +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 ATDAIAEKDLLEVDKYLLNRLREFTANTLDHYDNYDYLDIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY     S  RRS QTVL   ++ + +++APIL H AE+VW ++P
Sbjct: 725 KDILYIEERDSHKRRSMQTVLYQIVVDMTKLLAPILVHTAEEVWSHIP 772


>gi|373857243|ref|ZP_09599985.1| isoleucyl-tRNA synthetase [Bacillus sp. 1NLA3E]
 gi|372452893|gb|EHP26362.1| isoleucyl-tRNA synthetase [Bacillus sp. 1NLA3E]
          Length = 921

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/470 (45%), Positives = 292/470 (62%), Gaps = 45/470 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REP+I   W++  ++ +V  +  G   F+LHDGPPYANG+
Sbjct: 3   YKDTLLMPKTEFPMRGNLPKREPDIQTKWEEMDIYGKVQARTKGRPMFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           +HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T +
Sbjct: 63  IHMGHALNKVLKDFIVRYKSMSGFNAPYVPGWDTHGLPIE----QALTNKGVKRKEMTVA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R    K+A   +  Q + FKR GV ADW NPY+TL PEYEA QI+VFG+M+ +GYIY+
Sbjct: 119 EFRKLCEKYAYEQINNQRSQFKRLGVRADWENPYITLKPEYEAQQIKVFGEMAKKGYIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L+    D  + +W
Sbjct: 179 GLKPVYWSPSSESALAEAEIEYQDKR-SASIYVAFNVKDG----KGVLD---ADTKIVIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  ++V+  L Y VVE                         +K +  +VA 
Sbjct: 231 TTTPWTIPANLGISVHPDLTYVVVE-------------------------EKGLKYLVAE 265

Query: 403 DLVP--TLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
            L+   T E  W    V+KK + G++LEN   +HP+  R+  V++ G+++TT++GTG VH
Sbjct: 266 ALLEAVTTEIGWENPTVVKK-VKGNELENIIALHPLYGRESLVML-GEHVTTDAGTGCVH 323

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG++D++   KYGL +L+PVDD+G  T EA  F GL      N  + + L+E  +L
Sbjct: 324 TAPGHGEDDFLVGQKYGLDVLNPVDDKGHMTHEAPGFEGL-FYEKANKPITEKLEEAGAL 382

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +      H YP+DWRTKKP IFRAT QWFAS++ FR   ++A+ + KWVP
Sbjct: 383 LKLSFITHSYPHDWRTKKPVIFRATAQWFASIKDFRSELLEAVKETKWVP 432



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 83/217 (38%), Positives = 134/217 (61%), Gaps = 4/217 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    +IG V  +P +     GAD+LRLWV+SVDY  DV +   +L+Q++++YR
Sbjct: 586 ALDGEGRKMSKSIGNVV-IPAKVMDQLGADILRLWVASVDYQADVRVSDAILKQVAEVYR 644

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+LLGNL D+    +++ ++ L  +DQ+ L +L  ++K +R SYE+Y+F  I+ 
Sbjct: 645 KIRNTFRFLLGNLADFNPETDAVPFEKLREVDQFMLVKLNKVIKTVRHSYENYEFATIYH 704

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  +DLS+FY D AKD LY     +  RRS QTVL   LL++V+++APIL H A++
Sbjct: 705 AVNNFCTLDLSSFYLDFAKDVLYIEANNNLERRSIQTVLHESLLTLVKLVAPILSHTADE 764

Query: 730 VWQNLPFAY--TLEDGSAAEFVFESKWPVLDEKWRTF 764
           VW  +P     +++     E+V       L++KW  F
Sbjct: 765 VWAYIPSEKEESVQLTDLPEYVELPNANELEDKWSLF 801


>gi|386758265|ref|YP_006231481.1| isoleucyl-tRNA synthetase [Bacillus sp. JS]
 gi|384931547|gb|AFI28225.1| isoleucyl-tRNA synthetase [Bacillus sp. JS]
          Length = 921

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 210/467 (44%), Positives = 292/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +K T+ +PKT F MR N   REP+I K W++  ++  V ++  D   FVLHDGPPYANG+
Sbjct: 3   FKDTLLMPKTDFPMRGNLPNREPDIQKKWEEEDIYRLVQERTKDRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I R+K +  Y   YVPGWD HGLPIE  + ++   + +K+++ ++ 
Sbjct: 63  IHMGHALNKILKDFIVRFKSMSGYNAPYVPGWDTHGLPIETALTKNKKVN-RKEMSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q   FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEEYAWKQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L        + +WTT
Sbjct: 182 KPVNWSPSSESALAEAEIEYQDKR-SASIYVAFGVKDG----KGVLEN---GERIIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L+Y+V+ +     G+                       +VAS L
Sbjct: 234 TPWTIPANLGISVHPDLEYSVIAV-----GEDR--------------------FVVASAL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  + +  G  +  + +T+ G DLEN    HP+  R   V++ G+++TT++GTG VHTAP
Sbjct: 269 VENVASACGFDQYEVTRTVKGKDLENIIAEHPLYGRDSLVML-GEHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD +G  T EA  F G+    D N A+ + LDE+ +L+  
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDAKGVMTSEAPGFEGM-FYDDANKAITQQLDEKGALVKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E   H YP+DWRTKKPTIFRAT QWFAS++ FR   +DAI + KWVP
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLDAIKETKWVP 433



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 120/187 (64%), Gaps = 2/187 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    +IG V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYR 645

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+L GNL D+    N+++ ++L  +DQY L +L  ++  ++++Y+ Y+F  ++ 
Sbjct: 646 KIRNTFRFLHGNLFDFDPKTNAVAVEELREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYH 705

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            I  F  ++LS+FY D AKD +Y        RRS QTV    LL++V++ APILPH A++
Sbjct: 706 SIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLALVKLSAPILPHTADE 765

Query: 730 VWQNLPF 736
           +W +L F
Sbjct: 766 LWSHLTF 772


>gi|229186136|ref|ZP_04313305.1| Isoleucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228597312|gb|EEK54963.1| Isoleucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 921

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 217/471 (46%), Positives = 296/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V S KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVSKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|188585946|ref|YP_001917491.1| isoleucyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|254782421|sp|B2A2I8.1|SYI_NATTJ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|179350633|gb|ACB84903.1| Isoleucyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 926

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/468 (45%), Positives = 294/468 (62%), Gaps = 38/468 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LPKT F M+A    REPE  + W+ + ++ RV  K  G+  ++LHDGPPYANGN
Sbjct: 3   YKDTLNLPKTDFPMKAKLPSREPEFLQEWESNNLYQRVQQKRSGKPKYILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNK+LKDI+ ++K +Q Y   YVPGWD HGLPIE ++ ++   D +K ++  + 
Sbjct: 63  IHMGHALNKVLKDIVVKFKTMQGYDSPYVPGWDTHGLPIEHQITKTEKVD-RKSMSDVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   +A   V+ Q   FKR GV  DW+NPYLTL PE+EA Q+++FG+M+ +GYIY+G 
Sbjct: 122 RKKCHDYAMKYVEIQKEEFKRLGVRGDWDNPYLTLSPEFEAEQVKLFGEMAQKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W     TALAEAE+EY +   S SIY  F +      + G  NE    +   +WTT
Sbjct: 182 KPVYWCTDCETALAEAEVEYHDKR-SPSIYVGFHV----KDSKGEFNE--EGVEFIIWTT 234

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+A++ + QY+++                        K  +K + IVA+DL
Sbjct: 235 TPWTIPANMAIALHPEFQYSLI------------------------KSGEKHY-IVATDL 269

Query: 405 VPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           + T+  EAK G   +I++   G +LE     HP+ + +  +VI GD++T E GTG VHTA
Sbjct: 270 LETVAEEAKLGEYQIIRE-YTGRELEGIVCQHPLFDSRESLVILGDHVTLEQGTGCVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG EDY  + KY L +LSP++D G FTEEAG+F GL      N  + + LD++ +L+ 
Sbjct: 329 PGHGHEDYEVAQKYDLEVLSPLNDSGVFTEEAGQFQGL-YYDKANKEITQALDKRGALLS 387

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                H+YP  WR K+  IFRATEQWFASV+GFRQ A+ AI  V W+P
Sbjct: 388 LSFITHQYPCCWRCKESVIFRATEQWFASVDGFRQDALKAIEDVDWIP 435



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 134/229 (58%), Gaps = 15/229 (6%)

Query: 536 TKKPTIFRA--TEQWFASVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYT 592
           TK  + +R   T  W    EG + +      Q   + PQ+    YGAD+LRLWV+S ++ 
Sbjct: 574 TKGESPYRECLTNGWVVDGEGKKMSK----SQGNVIAPQDITNQYGADILRLWVASSEFK 629

Query: 593 GDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENI 651
            DV +  ++L+Q ++ YRK+R T R++LGNL+D+    + +S+D L  ID Y L +L+ +
Sbjct: 630 QDVRVSQKILKQTAEAYRKIRNTARFILGNLYDFTPEKDYVSFDQLEEIDSYILCRLQKV 689

Query: 652 VKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAH 711
           +     +Y+ ++F + + +I  F +V+LS FY DV KDR+YT  T S  RR+ QT +   
Sbjct: 690 IDQATRAYDEFEFHEFYHLIHNFCVVELSQFYLDVIKDRIYTMPTESRERRAAQTTMYYL 749

Query: 712 LLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEK 760
           L S+V+++AP+L   +E++WQ LP       G   E +  + WP ++E+
Sbjct: 750 LDSLVKMLAPVLTFTSEEIWQYLP-------GDREESIQLTDWPEVNEE 791


>gi|420145233|ref|ZP_14652705.1| Isoleucine--tRNA ligase (Isoleucyl-tRNA synthetase) [Lactobacillus
           coryniformis subsp. coryniformis CECT 5711]
 gi|398403139|gb|EJN56408.1| Isoleucine--tRNA ligase (Isoleucyl-tRNA synthetase) [Lactobacillus
           coryniformis subsp. coryniformis CECT 5711]
          Length = 930

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 217/469 (46%), Positives = 289/469 (61%), Gaps = 38/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  VRE E  K W+++ ++ +    N+G+  FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFPMRGNLPVREAEWQKAWEENNLYQQRQKLNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPS 222
           N+H+GHALNKI KDII R+K +  ++  YVPGWD HGLPIE ++  Q  D   +K ++ S
Sbjct: 62  NIHIGHALNKISKDIIVRFKSMSGFRAPYVPGWDTHGLPIEQQLTKQGYD---RKKMSIS 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + RA   K+A   V  Q   FKR GV ADW+ PYLTL PE+EA ++ VFG+M+ +GYIYR
Sbjct: 119 EFRALCHKYALEQVDKQRTDFKRLGVSADWDRPYLTLAPEFEAHEVRVFGEMAKKGYIYR 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KP+HWSPSS +ALAEAELEY +     + Y             G+L+    D    VW
Sbjct: 179 GNKPIHWSPSSESALAEAELEYKDIESPSAYYG-----EQVKDGKGILD---TDTYFVVW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PA+  + V A+  Y+VV+           PA +  +             +VAS
Sbjct: 231 TTTPWTIPASEGIVVEAEYDYSVVQ-----------PAGEDRK------------FVVAS 267

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +L+ TL  K G + V + KTL G D+E     HP    +  +V+ GDY+T +SGTGLVHT
Sbjct: 268 ELINTLAEKAGWQDVKVLKTLKGQDMEYMTAQHPFYQERELLVMLGDYVTLDSGTGLVHT 327

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APG G +D+    KYGL ILSPVDD+G+ T+EA  F GL    D N   +K +++   ++
Sbjct: 328 APGLGDDDFKVGKKYGLDILSPVDDQGRLTDEAPSFEGL-FYEDANKLSIKKVEDAGLML 386

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +EPY H YP DWRTKKP IFR+T QWFASV+ FR   + AI +V + P
Sbjct: 387 KQEPYLHSYPMDWRTKKPVIFRSTPQWFASVDAFRDQILAAIEKVSFTP 435



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 107/182 (58%), Gaps = 9/182 (4%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA++LRLWV++VD + DV +  +  +Q+SD YRK+R TLR+LL N  D+    +++ Y +
Sbjct: 615 GAEILRLWVATVDSSADVRVSMEGFKQVSDSYRKIRNTLRFLLANTTDFDPATDALDYSE 674

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y + +L  +      +Y  Y F  +++ I  FI VDLS FY D AKD +Y    
Sbjct: 675 LQSVDKYLMIRLNQVKAASLAAYNKYDFATVYKQISNFITVDLSAFYLDFAKDIVYIEAA 734

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 756
               RR+ QTV+   L+ + +++ PILPH  E+VW    F +  ED     +V  ++ PV
Sbjct: 735 DDPKRRAMQTVMYNVLVDLTKLLTPILPHTTEEVWG---FLHEPED-----YVQLAEMPV 786

Query: 757 LD 758
           +D
Sbjct: 787 VD 788


>gi|34763705|ref|ZP_00144628.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886533|gb|EAA23774.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 933

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 220/528 (41%), Positives = 313/528 (59%), Gaps = 56/528 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           Y  T+ LPKT F M+AN   +EP+  K W + +++ +  +KN +GE F+LHDGPPYANGN
Sbjct: 6   YTSTLHLPKTDFQMKANLPNKEPKYIKKWTEEKIYEKGLEKNKNGETFILHDGPPYANGN 65

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
            H+GHALNKILKDII +YK  + YK  YVPGWD HGLPIEL+V++ +     ++++  ++
Sbjct: 66  THIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQVVKEVGVSKAREMSALEI 125

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    K+A+  V  Q   F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI++G 
Sbjct: 126 RQLCEKYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIFKGL 185

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVW 342
           KPV+WSP++ TALAEAE+EY + HVS SIY   RM     +   LL++  F  D  + +W
Sbjct: 186 KPVYWSPATETALAEAEIEYYD-HVSPSIYV--RM----QANKDLLDKIGFNEDAYVLIW 238

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+ +N    Y +                 K+  GN         +I+A 
Sbjct: 239 TTTPWTLPANVAICLNENFDYGLY----------------KTEKGN---------LILAK 273

Query: 403 DLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           DL  +     G +   + K   G DLE   Y HP   R   +VI GD++T ++GTG VHT
Sbjct: 274 DLAESAFKDIGIENFELIKEFKGKDLEYTTYKHPFLER-TGLVILGDHVTADAGTGAVHT 332

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSL 520
           APGHGQEDYV +L Y LP++SP+D  G  TEEAG  F GL V  + N A+++YL +   +
Sbjct: 333 APGHGQEDYVVALNYKLPVISPIDHRGYLTEEAGDLFKGL-VYSEANKAIIEYLTKTGYI 391

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP------- 571
           +  +   H YP+DWR+K P IFRATEQWF  +EG   R+  + AI ++ ++P        
Sbjct: 392 LKMQEINHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKTLKAIDKINFIPSWGKNRIG 451

Query: 572 ---QEAPGYGADVLRLWVSSV-----DYTGDVMIGPQVLRQMSDIYRK 611
              +  P +     R+W   +     D T + +   ++L ++ D+ R+
Sbjct: 452 SMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDRICDLVRE 499



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 85/196 (43%), Positives = 127/196 (64%), Gaps = 15/196 (7%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+  ID++AL +LE + +N+ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRNVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 754
             S  RR+ QTV+   L+++ +++APIL   AE++W++L  A T E    AE +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMVAPILSFTAEEIWESLS-AETRE----AESIFLADWY 798

Query: 755 --------PVLDEKWR 762
                   P LDEKW+
Sbjct: 799 VNNDEYLKPELDEKWQ 814


>gi|402555981|ref|YP_006597252.1| isoleucyl-tRNA ligase [Bacillus cereus FRI-35]
 gi|401797191|gb|AFQ11050.1| isoleucyl-tRNA ligase [Bacillus cereus FRI-35]
          Length = 921

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/471 (45%), Positives = 295/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   VV+ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVVL-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|384045142|ref|YP_005493159.1| Isoleucyl-tRNA synthetase 1 [Bacillus megaterium WSH-002]
 gi|345442833|gb|AEN87850.1| Isoleucyl-tRNA synthetase 1 [Bacillus megaterium WSH-002]
          Length = 921

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/468 (45%), Positives = 292/468 (62%), Gaps = 40/468 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REP++ + W +  ++ +V  + +G   FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTEFPMRGNLPNREPKMQEQWAEMNIYEKVQKRTEGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  +   YVPGWD HGLPIE  + ++   + +K++T ++ 
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGFCAPYVPGWDTHGLPIETALTKNKKVN-RKEMTVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   V  Q   FKR GV  DW+NPY+TL P+YEA QI+VFG M+ +GYIY+G 
Sbjct: 122 RKLCEQYAWEQVNGQREQFKRLGVRGDWDNPYVTLQPQYEAQQIKVFGDMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L +   D    +WTT
Sbjct: 182 KPVYWSPSSESALAEAEIEYYDKR-SASIYVAFNVKDG----KGVLEQ---DEKFIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  +AVN +LQY+VVE       D A                     +VA++L
Sbjct: 234 TPWTMPANQGIAVNPELQYSVVE------ADGAK-------------------YVVATEL 268

Query: 405 VPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           + T+  E +W     ++ T+ GS+LE     HP+  R   VV+G D++TT++GTG VHTA
Sbjct: 269 IETVAKEIEWADYKTLR-TVKGSELERVVAEHPIYKRDSLVVLG-DHVTTDAGTGCVHTA 326

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KYGL +L PVD +G  T EA  F GL      N  +   L+E+ +L+ 
Sbjct: 327 PGHGEDDFIVGQKYGLEVLCPVDSKGHMTNEAPGFEGL-FYDKANKPITDKLEEEGALLK 385

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                H YP+DWRTKKPTIFRAT QWFAS++ FR+  + A+ + +WVP
Sbjct: 386 LSFITHSYPHDWRTKKPTIFRATAQWFASIKDFREDLLKAVEKTEWVP 433



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 114/168 (67%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           +P +     GAD+LRLWV+SVDY  DV +   +L+Q++++YRK+R T R+LLGNL D+  
Sbjct: 604 IPEKVMKQLGADILRLWVASVDYQADVRVSDNILKQVAEVYRKIRNTFRFLLGNLADFNP 663

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++ +DL  +D+Y L +L  ++  +++SY+SY+F  I+  +  F  +D+S+FY D A
Sbjct: 664 TTDAVAVEDLREVDRYMLVKLNKLIDKVKKSYDSYEFSSIYHAVHNFCTIDMSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY     +  RRS QTVL   LLS+ ++++PIL H A++VW ++P
Sbjct: 724 KDVLYIEAENNVERRSIQTVLYETLLSLTKLVSPILSHTADEVWVHIP 771


>gi|415886497|ref|ZP_11548277.1| isoleucyl-tRNA synthetase [Bacillus methanolicus MGA3]
 gi|387587184|gb|EIJ79507.1| isoleucyl-tRNA synthetase [Bacillus methanolicus MGA3]
          Length = 924

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/470 (45%), Positives = 292/470 (62%), Gaps = 45/470 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REPEI   W++  ++ +V ++  G   F+LHDGPPYANG+
Sbjct: 3   YKETLLMPKTEFPMRGNLPKREPEIQAKWEEMNIYQKVQERTKGRPMFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           +HMGHALNKILKDII RYK +  Y   YVPGWD HGLPIE    Q+L      +K++T S
Sbjct: 63  IHMGHALNKILKDIIVRYKSMSGYHAPYVPGWDTHGLPIE----QALTNKGVNRKEMTVS 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R    K+A   +  Q   FKR GV  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+
Sbjct: 119 EFRKLCEKYAYEQIDNQRTQFKRLGVRGDWENPYITLKPEYEAQQIKVFGEMAKKGYIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WSPSS +ALAEAE+EY +   S SIY  F++        G+L+    D  + +W
Sbjct: 179 GLKPVYWSPSSESALAEAEIEYKDKR-SPSIYVGFKVKDG----KGILD---TDTQIVIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  + V+ +L Y VVE                         +K    ++A 
Sbjct: 231 TTTPWTIPANLGITVHPELTYIVVE-------------------------EKGKKYLIAE 265

Query: 403 DLVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           +L+ ++  E  W    ++KK + G +LE     HP+ +R   V++ G+++TT++GTG VH
Sbjct: 266 ELLESVKNELSWENPAIMKK-IKGRELEYIIASHPLYDRDSLVML-GEHVTTDAGTGCVH 323

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG++D+    KYGL +L+PVD++G  T EA  F GL    D N ++ + L+E  +L
Sbjct: 324 TAPGHGEDDFNVGQKYGLDVLAPVDEKGYMTHEAPGFEGL-FYDDANKSITQKLEEVGAL 382

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +      H YP+DWRTKKP IFRAT QWFAS++ FR   ++A+ + KWVP
Sbjct: 383 LKLSFITHSYPHDWRTKKPVIFRATSQWFASIKDFRNELLEAVKETKWVP 432



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 138/219 (63%), Gaps = 8/219 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    ++G V  VP +    +GAD+LRLWV+SVDY  DV +   +L+Q++++YR
Sbjct: 586 ALDGEGRKMSKSLGNVV-VPAKVMDQFGADILRLWVASVDYQSDVRVSDAILKQVAEVYR 644

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+LLGNL D+    +++ Y++L  +DQ+ L +L  ++K + +SYE+Y+F  I+ 
Sbjct: 645 KIRNTFRFLLGNLADFNPEKDAVPYENLREVDQFMLVKLNKLIKYVHDSYENYEFSGIYH 704

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  +DLS FY D AKD LY     +  RRS QTVL   LL++ +++APIL H A++
Sbjct: 705 AVNNFCTLDLSAFYLDFAKDILYIEAADNKERRSIQTVLYESLLALTKLVAPILSHTADE 764

Query: 730 VWQNLPF----AYTLEDGSAAEFVFESKWPVLDEKWRTF 764
           VW ++PF    +  L D    + +  SK   L+EKW +F
Sbjct: 765 VWSHIPFVKEESVQLTDLPKYKELPNSK--ALEEKWTSF 801


>gi|225181686|ref|ZP_03735126.1| isoleucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167667|gb|EEG76478.1| isoleucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 914

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/470 (45%), Positives = 297/470 (63%), Gaps = 33/470 (7%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPY 160
           EE  Y  T++LPKT F MRA    REPE  + W+   ++ +V +   G E +VLHDGPPY
Sbjct: 2   EEKDYGKTLNLPKTDFPMRAGLPKREPEFLEQWEKTDIYQKVRNSRQGKEKYVLHDGPPY 61

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG++HMGHALNK+LKDII ++K +  +   YVPGWD HGLPIE +V++   +  + ++T
Sbjct: 62  ANGDIHMGHALNKVLKDIIVKHKSMSGFDSPYVPGWDTHGLPIEHQVVKK-GKVKRNEVT 120

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
           P + R     +A   +  Q   FKR GV  DW+NPY+TL PE+EA QIEVFG+M+ +GYI
Sbjct: 121 PLEFRRHCRDYALRFLDIQREQFKRLGVRGDWDNPYVTLKPEFEARQIEVFGEMANKGYI 180

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           Y+G KPVHW P   TALAEAE+EY E H S SIY  F +  A    +   N     +   
Sbjct: 181 YKGLKPVHWCPQCETALAEAEIEYAE-HKSPSIYVRFNVTDAKGKIADPEN-----VWFV 234

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN A++++    Y  V +++   GD             +L ++      +
Sbjct: 235 IWTTTPWTIPANLAISLHPDFTY--VRVRTPKHGDL------------ILAEE------L 274

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
             D++ T E   G ++V K    G +LE     HP+ +R+  VV+ G+++T E+GTG VH
Sbjct: 275 FGDVMETFEIT-GYEVVAK--YKGKELEGIVCKHPLYDRES-VVVLGEHVTLEAGTGCVH 330

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHGQEDY   L+YGL I +P+D  G+FT+EAG F+GL    +GN  V + L+E+ +L
Sbjct: 331 TAPGHGQEDYEVGLRYGLDIFAPMDHAGRFTQEAGPFAGLH-YNEGNKRVSQALEEEGAL 389

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +     +H YP+ WR K+P +FRATEQWFASVEGFR+ A++AI  VKW+P
Sbjct: 390 LSLSFLKHPYPHCWRCKEPVLFRATEQWFASVEGFRKQALEAIKDVKWIP 439



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/250 (37%), Positives = 145/250 (58%), Gaps = 13/250 (5%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R + P     T  W    EG + +   ++G V   P      YGAD+LRLWVSS D+  D
Sbjct: 579 RDRAPYKSTLTHGWVVDGEGKKMSK--SLGNVV-APEHIIKQYGADILRLWVSSTDFRSD 635

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 653
           V +   +L+Q++++YRK+R T+RY+LGN HD+    +++SYD L  +D+YAL +L+ +V+
Sbjct: 636 VRVSQDILKQLAEVYRKIRNTIRYMLGNCHDFNPQAHALSYDALDELDRYALHRLQVLVE 695

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
            +  +Y+ ++F  +F  I  F ++++SNFY DV KDRLYT    S  RRS QTV+   L+
Sbjct: 696 RVSGAYDDFEFHVVFHAIHNFCVIEMSNFYMDVLKDRLYTSPAASPGRRSAQTVMHEILV 755

Query: 714 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWG 773
           ++ ++IAP+L   +E+VW  LP       G   E V  S WP    +++   +     W 
Sbjct: 756 TLTKLIAPVLTFTSEEVWGYLP-------GEKEESVQLSNWPQSRPEYKDEELAN--RWQ 806

Query: 774 KILEVIVVVT 783
           K+L+   VVT
Sbjct: 807 KLLDYRDVVT 816


>gi|333394734|ref|ZP_08476553.1| isoleucyl-tRNA synthetase [Lactobacillus coryniformis subsp.
           coryniformis KCTC 3167]
          Length = 930

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 217/469 (46%), Positives = 289/469 (61%), Gaps = 38/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  VRE E  K W+++ ++ +    N+G+  FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFPMRGNLPVREAEWQKAWEENNLYQQRQKLNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPS 222
           N+H+GHALNKI KDII R+K +  ++  YVPGWD HGLPIE ++  Q  D   +K ++ S
Sbjct: 62  NIHIGHALNKISKDIIVRFKSMSGFRAPYVPGWDTHGLPIEQQLTKQGYD---RKKMSIS 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + RA   K+A   V  Q   FKR GV ADW+ PYLTL PE+EA ++ VFG+M+ +GYIYR
Sbjct: 119 EFRALCHKYALEQVDKQRTDFKRLGVSADWDRPYLTLAPEFEAHEVRVFGEMAKKGYIYR 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KP+HWSPSS +ALAEAELEY +     + Y             G+L+    D    VW
Sbjct: 179 GNKPIHWSPSSESALAEAELEYKDIESPSAYYG-----EQVKDGKGILD---TDTYFVVW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PA+  + V A+  Y+VV+           PA +  +             +VAS
Sbjct: 231 TTTPWTIPASEGIVVEAEYDYSVVQ-----------PAGEDRK------------FVVAS 267

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +L+ TL  K G + V + KTL G D+E     HP    +  +V+ GDY+T +SGTGLVHT
Sbjct: 268 ELINTLAEKAGWQDVKVLKTLKGQDMEYMTAQHPFYQERELLVMLGDYVTLDSGTGLVHT 327

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APG G +D+    KYGL ILSPVDD+G+ T+EA  F GL    D N   +K +++   ++
Sbjct: 328 APGLGDDDFKVGKKYGLDILSPVDDQGRLTDEAPGFEGL-FYEDANKLSIKKVEDAGLML 386

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +EPY H YP DWRTKKP IFR+T QWFASV+ FR   + AI +V + P
Sbjct: 387 KQEPYLHSYPMDWRTKKPVIFRSTPQWFASVDAFRDQILAAIEKVSFTP 435



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 107/182 (58%), Gaps = 9/182 (4%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA++LRLWV++VD + DV +  +  +Q+SD YRK+R TLR+LL N  D+    +++ Y +
Sbjct: 615 GAEILRLWVATVDSSADVRVSMEGFKQVSDSYRKIRNTLRFLLANTTDFDPATDALDYSE 674

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y + +L  +      +Y  Y F  +++ I  FI VDLS FY D AKD +Y    
Sbjct: 675 LQSVDKYLMIRLNQVKAASLAAYNKYDFATVYKQISNFITVDLSAFYLDFAKDIVYIEAA 734

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 756
               RR+ QTV+   L+ + +++ PILPH  E+VW    F +  ED     +V  ++ PV
Sbjct: 735 DDPKRRAMQTVMYNVLVDLTKLLTPILPHTTEEVWG---FLHEPED-----YVQLAEMPV 786

Query: 757 LD 758
           +D
Sbjct: 787 VD 788


>gi|333897307|ref|YP_004471181.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|333112572|gb|AEF17509.1| Isoleucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 927

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/467 (45%), Positives = 303/467 (64%), Gaps = 32/467 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y  T++LPKT F M+AN  +REPEI K W++  ++ +  DKN G E F+LHDGPPYANGN
Sbjct: 3   YNKTLNLPKTDFPMKANLPMREPEILKKWENMDIYHKSLDKNKGKEKFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A+NK+LKD++ +YK ++ Y+  YVPGWD HGLPIE + +++L    + D+ P + 
Sbjct: 63  IHLGTAMNKVLKDMVVKYKTMRGYESPYVPGWDTHGLPIEQQAIKTLGI-KRNDVGPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     FA + ++ Q   F R GV  DW NPYLTL PEYEA QIEVFG+M+ +GYIY+G 
Sbjct: 122 RRVCRDFAFSQIEKQKEQFIRLGVRGDWQNPYLTLKPEYEAKQIEVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W     TALAEAE+EY +   S SIY  FR+V       G++++ L +L   +WTT
Sbjct: 182 KPVYWCTDCETALAEAEIEYSD-EKSDSIYVKFRIVDDLGKFKGIVDD-LSNLYFVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           T WT+PAN A+ +N    YA+                  ++ GN +        I+A D+
Sbjct: 240 TTWTIPANLAICLNPDFDYAL------------------AKYGNEI-------YIMAKDM 274

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + ++E + G +   I  T  GS+LE  +  HP+ +R   ++I G+++T E+GTG VHTAP
Sbjct: 275 LDSIEKETGLSNHEIIATFKGSELEGMKAKHPLFDRT-SLIILGEHVTQEAGTGCVHTAP 333

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED+V   KYGL +L+PVDD+G+FTE+AGK++GL    D N  + + L++  +L+  
Sbjct: 334 GHGEEDFVVGQKYGLDVLNPVDDKGRFTEKAGKYNGL-FYSDANKVIKEDLEKANALLAS 392

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           + + H YP+ WR K P IFRATEQWFASV+GFR  A+ AI +V W+P
Sbjct: 393 KTFTHSYPHCWRCKNPVIFRATEQWFASVDGFRDEALKAIKEVNWIP 439



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 117/188 (62%), Gaps = 7/188 (3%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P      YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+   
Sbjct: 611 PADVVKEYGADILRLWAVSADFTSDMRISKEILKQMTESYRKIRNTAKFLLSNLYDFDAD 670

Query: 630 NSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
             +  YD+L  ID++AL++   +VK++ E+++ Y+F++   ++  F IVD+SN Y D+ K
Sbjct: 671 KDLLPYDELLDIDKWALYKYNELVKDVTEAFDKYKFYEFLHLVHTFCIVDMSNLYLDILK 730

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG-SAAE 747
           DRLYT   TS  R++ QT L   L   VR+IAP+L   A+++W     +Y   D  ++ E
Sbjct: 731 DRLYTFPATSKERKAAQTTLYIILNGFVRIIAPVLTFTADEIW-----SYMQHDAKNSFE 785

Query: 748 FVFESKWP 755
            V  + WP
Sbjct: 786 SVQLADWP 793


>gi|423478034|ref|ZP_17454749.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG6X1-1]
 gi|402428196|gb|EJV60293.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG6X1-1]
          Length = 921

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEQWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEERRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|423457920|ref|ZP_17434717.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG5X2-1]
 gi|401148304|gb|EJQ55797.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG5X2-1]
          Length = 921

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEQWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|229031527|ref|ZP_04187527.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729816|gb|EEL80796.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 921

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEQWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++            N+K               I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN-----------NEK--------------YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENTEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVP 770


>gi|423401262|ref|ZP_17378435.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG2X1-2]
 gi|401654252|gb|EJS71795.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG2X1-2]
          Length = 921

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEQWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVD----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEERRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|212639638|ref|YP_002316158.1| isoleucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212561118|gb|ACJ34173.1| Isoleucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 918

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/467 (45%), Positives = 296/467 (63%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REP++   WD+  ++ +V ++  D   FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGNLPQREPQMQAKWDEMDIYRKVQERTKDRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++   + +K+++ ++ 
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGYCAPYVPGWDTHGLPIETALTKNKGVN-RKEMSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   +  Q   FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G 
Sbjct: 122 RKLCEQYAYEQIDRQREQFKRLGVRGDWDNPYITLTPEYEAQQIKVFGEMAKKGLIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L+    D  + +WTT
Sbjct: 182 KPVYWSPSSESALAEAEIEYKDKR-SPSIYVAFPVKDG----KGVLD---GDEKIVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  +AV+ +LQY+VVE          A   K                +VAS+L
Sbjct: 234 TPWTIPANLGIAVHPQLQYSVVE----------ADGGK---------------YVVASEL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + +++ + G   + + KT+ GS+LE     HP  +R   +VI G+++TT++GTG VHTAP
Sbjct: 269 LQSVQKEIGWEHVTVLKTVKGSELEYVVAKHPFYDRDS-LVICGEHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD+ G  TEEA  FSG+    D N A+ + L E  +L+  
Sbjct: 328 GHGEDDFIVGQKYGLGVLCPVDERGYMTEEAPGFSGM-FYDDANKAITEKLQEVGALLKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H YP+DWRTK+PTIFRAT QWFAS++  R+  + A+ + KWVP
Sbjct: 387 SFITHSYPHDWRTKQPTIFRATAQWFASIDKIREQLLKAVEETKWVP 433



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 114/168 (67%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GAD+LRLWV+SVDY  DV I   +L+Q++++YRK+R T R++LGNL D+  
Sbjct: 604 VPAKVMEQLGADILRLWVASVDYQADVRISDNILKQVAEVYRKIRNTFRFMLGNLFDFNP 663

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++ + L  +D+Y L +L  +++ ++++YE+Y+F  I+  +  F  VDLS FYFD +
Sbjct: 664 AEHTVAIEQLREVDRYMLIKLNRLIEKVKQAYETYEFATIYHEVNNFCTVDLSAFYFDFS 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY     +  RRS QTVL   L+++ +++APILPH A++VW  +P
Sbjct: 724 KDVLYIEAANNHERRSIQTVLYETLVALTKLVAPILPHTADEVWSYIP 771


>gi|194014535|ref|ZP_03053152.1| isoleucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194013561|gb|EDW23126.1| isoleucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 921

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 208/467 (44%), Positives = 295/467 (63%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   +EPEI + W +  ++  V ++  G   F+LHDGPPYANG+
Sbjct: 3   YKDTLLMPKTEFPMRGNLPNKEPEIQEEWAEKDIYQMVLERTKGRPTFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I R+K +  +   YVPGWD HGLPIE  + ++  +  +K+++ ++ 
Sbjct: 63  IHMGHALNKILKDFIVRFKSMNGFHAPYVPGWDTHGLPIETALTKN-KKVKRKEMSTAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q   FKR GV ADW+NPY+TL PEYEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEEYAWKQIEGQRNQFKRLGVRADWDNPYVTLKPEYEAQQILVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F++        G+L          +WTT
Sbjct: 182 KPVNWSPSSESALAEAEIEYKDKR-SPSIYVSFKVKDG----KGVLEN---GEQFIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  + V+  L+Y+V+++ +                            +VAS+L
Sbjct: 234 TPWTLPANLGICVHPNLEYSVLQVGAER-------------------------YVVASEL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  +    G  +  + KTL G +L+N    HP+  R   V++ GD++TT++GTG VHTAP
Sbjct: 269 VEQVAKTLGFEEYEVVKTLKGKELDNVVAEHPIYGRDSLVML-GDHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++ S+KYGL +L PVD++G  TEEA  F GL    D N A+ + L+ + +L   
Sbjct: 328 GHGEDDFIVSMKYGLDVLCPVDEKGVMTEEAPGFEGL-FYEDANKAITEQLEAKGALKKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +   H YP+DWRTKKPTI+RAT QWFAS++ FR+A +D I + KWVP
Sbjct: 387 DFITHSYPHDWRTKKPTIYRATAQWFASIKDFREALLDNIKETKWVP 433



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 109/168 (64%), Gaps = 1/168 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 605 PTKVAKQLGAEILRLWVSSVNYQADHPVSDDILKQVAEVYRKIRNTFRFLHGNLFDFEPA 664

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            +++  ++L  +DQY L +L  ++  ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 665 VHAVPVEELREVDQYILIKLNKLIDKVKKAYDDYEFAVVYHAIHNFCTIELSSFYLDFAK 724

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           D +Y        RRS QTV    L+++V++ APILPH A+++W +L F
Sbjct: 725 DVVYIEHADHPDRRSMQTVFYETLMALVKLTAPILPHTADELWSHLSF 772


>gi|196045913|ref|ZP_03113142.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225865877|ref|YP_002751255.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|376267792|ref|YP_005120504.1| isoleucyl-tRNA synthetase [Bacillus cereus F837/76]
 gi|254782364|sp|C1EPQ9.1|SYI_BACC3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|196023353|gb|EDX62031.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225789418|gb|ACO29635.1| isoleucine--tRNA ligase [Bacillus cereus 03BB102]
 gi|364513592|gb|AEW56991.1| Isoleucyl-tRNA synthetase [Bacillus cereus F837/76]
          Length = 921

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/471 (45%), Positives = 295/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|49481690|ref|YP_037957.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|196038708|ref|ZP_03106016.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|423550356|ref|ZP_17526683.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus ISP3191]
 gi|81395073|sp|Q6HER9.1|SYI1_BACHK RecName: Full=Isoleucine--tRNA ligase 1; AltName:
           Full=Isoleucyl-tRNA synthetase 1; Short=IleRS 1
 gi|49333246|gb|AAT63892.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|196030431|gb|EDX69030.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|401189972|gb|EJQ97022.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus ISP3191]
          Length = 921

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/471 (45%), Positives = 295/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|118479116|ref|YP_896267.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118418341|gb|ABK86760.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 923

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/471 (45%), Positives = 295/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 4   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 63

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 64  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 119

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 120 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 179

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 180 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 231

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 232 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 266

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 267 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 324

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 325 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 383

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 384 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 434



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 599 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 657

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 658 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 717

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 718 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 772


>gi|423406680|ref|ZP_17383829.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG2X1-3]
 gi|401659970|gb|EJS77453.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG2X1-3]
          Length = 921

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 295/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++            N+K               I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN-----------NEK--------------YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENTEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|423574498|ref|ZP_17550617.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus MSX-D12]
 gi|401212023|gb|EJR18769.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus MSX-D12]
          Length = 921

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/471 (45%), Positives = 295/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAIAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|52141594|ref|YP_085236.1| isoleucyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81824207|sp|Q636D1.1|SYI1_BACCZ RecName: Full=Isoleucine--tRNA ligase 1; AltName:
           Full=Isoleucyl-tRNA synthetase 1; Short=IleRS 1
 gi|51975063|gb|AAU16613.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus E33L]
          Length = 921

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/471 (45%), Positives = 295/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|42782988|ref|NP_980235.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81409428|sp|Q732H4.1|SYI1_BACC1 RecName: Full=Isoleucine--tRNA ligase 1; AltName:
           Full=Isoleucyl-tRNA synthetase 1; Short=IleRS 1
 gi|42738915|gb|AAS42843.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 921

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/471 (45%), Positives = 295/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|423395804|ref|ZP_17373005.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG2X1-1]
 gi|401653546|gb|EJS71090.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG2X1-1]
          Length = 921

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 295/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFNAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++            N+K               I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN-----------NEK--------------YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENTEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 117/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++ G N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPGENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|384181710|ref|YP_005567472.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
 gi|324327794|gb|ADY23054.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 921

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/471 (45%), Positives = 295/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAIAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|423615841|ref|ZP_17591675.1| isoleucyl-tRNA synthetase [Bacillus cereus VD115]
 gi|401260378|gb|EJR66551.1| isoleucyl-tRNA synthetase [Bacillus cereus VD115]
          Length = 921

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTIKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVP 770


>gi|196035856|ref|ZP_03103258.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|218905025|ref|YP_002452859.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228928944|ref|ZP_04091976.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228947615|ref|ZP_04109905.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229123409|ref|ZP_04252613.1| Isoleucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|254782362|sp|B7JJY2.1|SYI_BACC0 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|195991505|gb|EDX55471.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|218537446|gb|ACK89844.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228660185|gb|EEL15821.1| Isoleucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228812135|gb|EEM58466.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228830751|gb|EEM76356.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 921

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/471 (45%), Positives = 295/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|407706354|ref|YP_006829939.1| cytochrome c oxidase subunit III [Bacillus thuringiensis MC28]
 gi|407384039|gb|AFU14540.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis MC28]
          Length = 921

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/526 (42%), Positives = 312/526 (59%), Gaps = 59/526 (11%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP   R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYERDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP-------- 571
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP         
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVPAWGETRLHN 441

Query: 572 --QEAPGYGADVLRLWVSSVDY----TGDVMIGPQVLRQMSDIYRK 611
             ++   +     R W   +       GD +I  + +  ++D++RK
Sbjct: 442 MVRDRGDWCISRQRAWGVPIPVFYAENGDPIITDETINHVADLFRK 487



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVP 770


>gi|423464447|ref|ZP_17441215.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG6O-1]
 gi|402420714|gb|EJV52985.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG6O-1]
          Length = 921

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/471 (45%), Positives = 293/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP   R   V++ GD++TTE+GTG V
Sbjct: 265 SELFETVAKTLEWEKAEVV-KTVKGSELEYTVAKHPFYERDSLVML-GDHVTTEAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVP 770


>gi|134298586|ref|YP_001112082.1| isoleucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|172044256|sp|A4J2F4.1|SYI_DESRM RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|134051286|gb|ABO49257.1| Isoleucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 931

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 205/467 (43%), Positives = 289/467 (61%), Gaps = 37/467 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           Y  T++LP+T F MR N   REPE  K W +  ++ +V +KN G+  F+LHDGPPYANG+
Sbjct: 3   YSKTLNLPQTQFPMRGNLPQREPETQKYWQEIDLYKKVQEKNKGKTKFILHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH LNK+LKDII +Y+ +  Y   YVPGWD HGLPIE + ++ L  + +  + P + 
Sbjct: 63  IHLGHTLNKVLKDIIVKYRSMSGYDAPYVPGWDTHGLPIEQQAIKQLGIN-RHQVNPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           RAK   +A      Q   F+R GV  DW NPY TL P+YEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RAKCKDYALKWANTQSEEFQRLGVRGDWENPYYTLLPQYEATQIRVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W  S  TALAEAE+EY +   S SIY  F +        G+L +   D  + +WTT
Sbjct: 182 KPVYWCASCETALAEAEVEYAD-KTSPSIYVKFPVKDG----KGVLPQ---DAAVVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A++V+ + +Y +  +Q           N+K              I+VA +L
Sbjct: 234 TPWTLPANVAISVHPEFEYVLAAVQ-----------NQK--------------IVVAKEL 268

Query: 405 VPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + + +   G +   I  T  G  LE     HP  + +  +VI G+++T ++GTG VHTAP
Sbjct: 269 LESFKQAVGAEEAEILATYQGEQLERVVCQHPFIDERESLVILGEHVTLDAGTGAVHTAP 328

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED++   KY LP+L+P+D+ G+FT E GKF G  ++ D N  +++ L E+ +L+  
Sbjct: 329 GHGEEDFMVGKKYELPVLAPIDNRGRFTSEGGKFQGQFIM-DANKTIIEELKERDALMGH 387

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              +H+YP+ WR K+P  FRATEQWFASV+GFRQ A+ AI  VKWVP
Sbjct: 388 VSIKHQYPHCWRCKQPIFFRATEQWFASVDGFRQEALQAIRNVKWVP 434



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 109/159 (68%), Gaps = 1/159 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSS DY  D+ +   +L+QM++ YRK+R T R+LLGNL+D+  V + ++YD 
Sbjct: 619 GADILRLWVSSADYRADLALSQNILKQMTESYRKIRNTARFLLGNLYDFDPVKDKVAYDK 678

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           LP +D+ AL +L  ++K +  +YE+Y+F  ++  +  + +VDLS FY D+ KDRLYT   
Sbjct: 679 LPELDRVALMELHKLIKQVLAAYENYEFHIVYHAVHNYCVVDLSAFYLDIIKDRLYTAVP 738

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
            S  RR+ QTVL   L ++VR++ P+L    E++++ +P
Sbjct: 739 GSLERRAAQTVLYEALDALVRLLTPVLAFTTEEIYKYMP 777


>gi|229192065|ref|ZP_04319034.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228591391|gb|EEK49241.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 921

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMSGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  NR   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYNRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|167636430|ref|ZP_02394729.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170688822|ref|ZP_02880025.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|254683395|ref|ZP_05147255.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254739817|ref|ZP_05197510.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|421639651|ref|ZP_16080242.1| isoleucyl-tRNA ligase [Bacillus anthracis str. BF1]
 gi|167528172|gb|EDR90959.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170667177|gb|EDT17937.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|403393316|gb|EJY90561.1| isoleucyl-tRNA ligase [Bacillus anthracis str. BF1]
          Length = 921

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/471 (45%), Positives = 293/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++  V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYETVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F +        G       D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAFSVKDGKNVLEG-------DEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|427392308|ref|ZP_18886313.1| isoleucine-tRNA ligase [Alloiococcus otitis ATCC 51267]
 gi|425731575|gb|EKU94391.1| isoleucine-tRNA ligase [Alloiococcus otitis ATCC 51267]
          Length = 926

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/464 (45%), Positives = 292/464 (62%), Gaps = 39/464 (8%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGNL 165
           K T++L KT F MRA    +EP   K W++ Q+F ++ +KN D E F+LHDGPPYANGN+
Sbjct: 4   KDTLNLLKTDFSMRAKLSQKEPAYQKKWEEDQLFEQMLEKNKDKEPFILHDGPPYANGNI 63

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKI KDIINRYK +  Y   YVPGWD HGLPIE  + +S  +  +K ++ ++ R
Sbjct: 64  HIGHALNKITKDIINRYKTMAGYYTPYVPGWDTHGLPIESALTKSGVD--RKSMSVAEFR 121

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
                +A   +  Q   FKR GV   W++PY+TL  +YEAAQI VF +M+L+GYIYRG K
Sbjct: 122 KLCEDYAWDQINQQRKDFKRLGVLGRWDDPYVTLTKDYEAAQIRVFSEMALKGYIYRGLK 181

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PV+WSPSS +ALAEAE+EY +     SIY  F +        G+L++      + +WTTT
Sbjct: 182 PVYWSPSSESALAEAEIEYKDVR-GPSIYVSFDVKDG----KGVLDQ---GDKIVIWTTT 233

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+P+N A+AV+ + +Y V ++    EG +                      +VA+ L+
Sbjct: 234 PWTLPSNLAIAVHPEGEYGVYQV----EGQN---------------------YVVATKLI 268

Query: 406 PTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
             +  K G   + + +T+ G DLEN   +HP  +R+  +VI GD++T +SGTGLVHTAPG
Sbjct: 269 DEVSEKVGWEDIELVRTIKGEDLENIICLHPYLDRES-LVILGDHVTFDSGTGLVHTAPG 327

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG +DY+   KY LP+LSP+DD+G FT+E  +F GL    D N+     L E  +L+  E
Sbjct: 328 HGDDDYIVCQKYDLPVLSPIDDKGYFTDEVPEFEGL-FYDDANIKSTDLLKENNALLHME 386

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
              H YP+DWRTKKP IFRAT QWFAS++ FRQA +D + +V W
Sbjct: 387 FRTHSYPHDWRTKKPVIFRATPQWFASIDKFRQAILDEVEKVDW 430



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 113/184 (61%), Gaps = 6/184 (3%)

Query: 553 EGFRQAAMDAIGQVKWVPPQE-APGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 611
           EG++ +   ++G V  + P + A   GAD++RLW  SVD   DV +   +L Q++++YRK
Sbjct: 590 EGYKMSK--SVGNV--IDPNDVANDMGADIIRLWSISVDTEADVRVSHDILNQVAEVYRK 645

Query: 612 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 670
           +R T+R+L+ N  D+    N + Y DL  +DQY L Q + +V  +  +Y+ Y +  I++ 
Sbjct: 646 IRNTVRFLIQNTEDFDPKVNEVDYQDLSGLDQYILVQTDRLVDQVLTAYDEYNYLDIYKT 705

Query: 671 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
           + +F  V LSNFY +++KD LY     + +RR+ QTV    LL + +++AP++PH AE++
Sbjct: 706 VNQFCTVTLSNFYMNISKDILYIDPEDAQSRRAVQTVFYKILLVLAKLLAPVIPHTAEEI 765

Query: 731 WQNL 734
           W  L
Sbjct: 766 WSYL 769


>gi|30263897|ref|NP_846274.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529327|ref|YP_020676.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49186745|ref|YP_029997.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321224|ref|ZP_00394183.1| COG0060: Isoleucyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165872280|ref|ZP_02216917.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167641124|ref|ZP_02399379.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170708818|ref|ZP_02899254.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177654920|ref|ZP_02936637.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190565901|ref|ZP_03018820.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
 gi|227813195|ref|YP_002813204.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229604270|ref|YP_002868131.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0248]
 gi|254735935|ref|ZP_05193641.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751007|ref|ZP_05203046.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757935|ref|ZP_05209962.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|421507437|ref|ZP_15954357.1| isoleucyl-tRNA ligase [Bacillus anthracis str. UR-1]
 gi|81583658|sp|Q81WE4.1|SYI1_BACAN RecName: Full=Isoleucine--tRNA ligase 1; AltName:
           Full=Isoleucyl-tRNA synthetase 1; Short=IleRS 1
 gi|254782360|sp|C3P665.1|SYI_BACAA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|254782361|sp|C3L730.1|SYI_BACAC RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|30258541|gb|AAP27760.1| isoleucine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47504475|gb|AAT33151.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49180672|gb|AAT56048.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164711956|gb|EDR17496.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510904|gb|EDR86295.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170126303|gb|EDS95194.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|172080431|gb|EDT65518.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190562820|gb|EDV16786.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
 gi|227002605|gb|ACP12348.1| isoleucine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229268678|gb|ACQ50315.1| isoleucine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|401822571|gb|EJT21721.1| isoleucyl-tRNA ligase [Bacillus anthracis str. UR-1]
          Length = 921

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/471 (45%), Positives = 293/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++  V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYETVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F +        G       D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAFSVKDGKNVLEG-------DEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|387927108|ref|ZP_10129787.1| isoleucyl-tRNA synthetase [Bacillus methanolicus PB1]
 gi|387589252|gb|EIJ81572.1| isoleucyl-tRNA synthetase [Bacillus methanolicus PB1]
          Length = 924

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 220/525 (41%), Positives = 312/525 (59%), Gaps = 59/525 (11%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REPEI   W++  ++ +V ++  G   F+LHDGPPYANG+
Sbjct: 3   YKDTLLMPKTEFPMRGNLPKREPEIQAKWEEMNIYQKVQERTKGRPMFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           +HMGHALNKILKDII RYK +  Y   YVPGWD HGLPIE    Q+L      +K++T +
Sbjct: 63  IHMGHALNKILKDIIVRYKSMSGYHAPYVPGWDTHGLPIE----QALTNKGVNRKEMTVA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R    ++A   +  Q   FKR GV  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+
Sbjct: 119 EFRKLCEEYAYEQIDNQRTQFKRLGVRGDWENPYITLKPEYEAQQIKVFGEMAKKGYIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WSPSS +ALAEAE+EY +   S SIY  F++        G+L+    D  + +W
Sbjct: 179 GLKPVYWSPSSESALAEAEIEYKDKR-SPSIYVGFKVKDG----KGVLD---TDTQIVIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  + V+ +L Y V              AN K +             ++A 
Sbjct: 231 TTTPWTIPANLGITVHPELTYIV--------------ANNKGKK-----------FLIAE 265

Query: 403 DLVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
            L+ ++  E  W    V+K+ + G++LE     HP+ +R   V++ G+++TT++GTG VH
Sbjct: 266 KLLESVSKELDWENPSVVKR-VKGAELEYVIASHPLYDRHSLVML-GEHVTTDAGTGCVH 323

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG++D+    KYGL +L+PVD++G  T EA  F GL    + N A+ + L+E  +L
Sbjct: 324 TAPGHGEDDFNVGQKYGLDVLAPVDEKGYMTNEAPGFEGL-FYDEANKAITQKLEEAGAL 382

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP--------- 571
                  H YP+DWRTKKP IFRAT QWFAS++ FR+  +DAI + KWVP          
Sbjct: 383 FKLSFITHSYPHDWRTKKPVIFRATSQWFASIKDFRKELLDAIKETKWVPAWGETRLHNM 442

Query: 572 -QEAPGYGADVLRLWVSSVDY----TGDVMIGPQVLRQMSDIYRK 611
            ++   +     R+W   +       G+ +I  + +  +SD++RK
Sbjct: 443 VRDRGDWCISRQRVWGVPIPVFYAENGEPIITDETINHVSDLFRK 487



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 134/217 (61%), Gaps = 4/217 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    ++G V  VP +     GAD+LRLWV+SVDY  DV +   +L+Q++++YR
Sbjct: 586 ALDGEGRKMSKSLGNVV-VPAKVMNQLGADILRLWVASVDYQSDVRVSDSILKQVAEVYR 644

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+LLGNL D+    +++SY+DL  +DQ+ L +L  ++K + ESY +Y+F  I+ 
Sbjct: 645 KIRNTFRFLLGNLADFNPEKDAVSYEDLREVDQFMLVKLNKLIKLVHESYGNYEFSGIYH 704

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  +DLS FY D AKD LY     +  RRS QTVL   LL++ +++APIL H A++
Sbjct: 705 AVNNFCTIDLSAFYLDFAKDVLYIEAADNKERRSIQTVLYESLLALTKLVAPILSHTADE 764

Query: 730 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTF 764
           VW ++PF    +++     E+        L+EKW  F
Sbjct: 765 VWAHIPFVEEESVQLTDLPEYKELPNAKALEEKWTKF 801


>gi|47570310|ref|ZP_00240957.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553019|gb|EAL11423.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 921

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 295/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVTKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|433545423|ref|ZP_20501777.1| isoleucyl-tRNA synthetase, partial [Brevibacillus agri BAB-2500]
 gi|432183246|gb|ELK40793.1| isoleucyl-tRNA synthetase, partial [Brevibacillus agri BAB-2500]
          Length = 837

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/467 (44%), Positives = 295/467 (63%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  T+ LPKT F MR N   REP+I + W++  ++ +V  + +G  +FVLHDGPPYANG+
Sbjct: 3   YSKTLSLPKTDFPMRGNLPTREPQIQEKWEEQNIYQQVLARTEGRPSFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKD I RYK +  +   Y+PGWD HGLPIE  ++ +   D ++++  +  
Sbjct: 63  IHIGHALNKILKDFIVRYKSMAGFYAPYIPGWDTHGLPIEQAIVNAQGLD-RRNIEVNDF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  ++A + +  Q   FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKRCEEYAWSYIDKQRDQFKRLGVRGDWENPYVTLLPEYEANQIRVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           + V+WSPSS TALA+AE+EY +   S SIY  FR+V       G L+    + G+ +WTT
Sbjct: 182 RCVYWSPSSETALADAEIEYKDKR-SPSIYVSFRVVDG----KGKLDT---ETGVVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A++++ +L+Y+VV+                        D +K   +VA+ L
Sbjct: 234 TPWTIPANLAISLHPELEYSVVK-----------------------ADGRK--FLVANGL 268

Query: 405 VPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           +     + G + V +  +  G +LE     HP+ +R  P+++ G+++T ++GTG VHTAP
Sbjct: 269 IEAASKEIGWENVEVLASFKGQELEGVVTKHPIYDRPSPLIL-GEHVTLDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D+    KY L +L PVD EGK T EA  F GL    D N AV + L E  +L+  
Sbjct: 328 GHGEDDFAVGQKYNLGVLCPVDHEGKMTSEAPGFEGL-FYEDANKAVTEKLKENGALLKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + H YP+DWRTKKP I+RATEQWFAS++GFR+  ++AI  VKW+P
Sbjct: 387 NFFTHSYPHDWRTKKPVIYRATEQWFASIDGFREQMLEAIKNVKWIP 433



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/168 (45%), Positives = 111/168 (66%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP Q     GAD+LRLWV+SVDY  DV I   +L Q++++YRK+R T R+LLGNL  +  
Sbjct: 604 VPQQVIDKLGADILRLWVASVDYQADVRISDAILNQIAEVYRKIRNTFRFLLGNLDGFDP 663

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + ++Y+ L  +D+Y L +   +VK  R++Y+ YQF  +F  +  F ++DLS FY D+ 
Sbjct: 664 AKDRVAYEQLGELDRYVLAKAAKVVKRSRKAYDEYQFHTVFHAVHNFCVIDLSAFYLDIC 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KDRLY     S  RR+ QTV+   LLS+V+++APILPH A++VW  +P
Sbjct: 724 KDRLYVEAPDSVKRRAAQTVMYDCLLSLVKLVAPILPHTADEVWSFIP 771


>gi|154250101|ref|YP_001410926.1| isoleucyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769391|sp|A7HMY6.1|SYI_FERNB RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|154154037|gb|ABS61269.1| isoleucyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 913

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 217/528 (41%), Positives = 308/528 (58%), Gaps = 60/528 (11%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F M+AN + +EP + K W++ +++ +  +  +G   ++LHDGPPYANG+
Sbjct: 3   YKETLNLPQTNFQMKANLVQKEPNMLKYWEEKEIYKKTLETREGAPTYLLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A+NKILKD + RYK ++ Y+V YVPGWD HGLPIE +V  +L E+AKK  +P ++
Sbjct: 63  IHLGTAMNKILKDFVTRYKTMRGYRVPYVPGWDTHGLPIEHRVTTTLGEEAKKK-SPVEI 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    +FA   V  Q   FKR GV  DW +PY+TL P+YE   ++VF  +   G +YRG 
Sbjct: 122 RKLCKEFALKYVDIQREEFKRLGVKGDWEHPYITLTPDYEYHILDVFKTLVENGNVYRGN 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W P+ RTALAEAE+EY + H S SIY  F+MV              PD  + +WTT
Sbjct: 182 KPVYWCPTCRTALAEAEIEYHD-HESPSIYVKFQMVDQ------------PDTYVVIWTT 228

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+A++ + +Y  +++                  GN        + IVA  L
Sbjct: 229 TPWTIPANVAIALHPEYEYLKIKV------------------GN-------EYWIVADGL 263

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           +    ++ G +  + +   G  LE     HP+ +R   V++  DY+T E GTG VHTAPG
Sbjct: 264 LQKFASETGIEFQVTEKFLGKTLEGKLTKHPLYDRTS-VIVLADYVTLEDGTGCVHTAPG 322

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG+EDY T LKY LPILSPVDDEGKFT+EAGK+ GL +  D N  VV+ L++  +LI   
Sbjct: 323 HGEEDYQTGLKYNLPILSPVDDEGKFTKEAGKYEGLKIW-DANKVVVEDLEKAGALIKFG 381

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASV--EGFRQAAMDAIGQVKWVPP----------Q 572
              H YP+ WR K P +FRAT QWF SV     R   ++ I +VKW P           Q
Sbjct: 382 KISHSYPHCWRCKGPVMFRATPQWFISVNKNNLRGKVLEQIKKVKWYPSWGENRITAMVQ 441

Query: 573 EAPGYGADVLRLW-----VSSVDYTGDVMIGPQVLRQMSDIYRKLRGT 615
           E P +     R+W             +V + P+V+   ++I ++ +GT
Sbjct: 442 ERPDWTISRQRVWGVPIPAVKCKSCDEVTLDPKVIEHFANIVKE-KGT 488



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 105/160 (65%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 636
           YGAD+LRLWV+S D+  ++ +G  ++ Q  ++YRKLR TLRYLL NL+D+   + + Y+ 
Sbjct: 608 YGADILRLWVASTDFFDNIRVGKNIIEQQVEVYRKLRNTLRYLLSNLYDFTENDILPYEK 667

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D++AL +L+  ++ + + YE +++ K++    ++   +LS+ Y D+ KDRLY    
Sbjct: 668 LLPLDKWALGRLQKYIEQVTQYYEEFEYSKVYNATVKYCTTELSSIYLDILKDRLYVEAK 727

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
            S  RRS QTVL   L ++++++API+P  AE+ +Q  P 
Sbjct: 728 DSIYRRSAQTVLYYILEALIKILAPIMPFTAEEAYQESPL 767


>gi|229174562|ref|ZP_04302092.1| Isoleucyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608867|gb|EEK66159.1| Isoleucyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 921

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEQWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + +WVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETQWVP 432



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|433446183|ref|ZP_20410242.1| isoleucyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
 gi|432000479|gb|ELK21373.1| isoleucyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
          Length = 918

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/467 (45%), Positives = 296/467 (63%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REP++   WD+  ++ +V ++  D   FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGNLPQREPQMQAKWDEMDIYRKVQERTKDRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++   + +K+++ ++ 
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGYCAPYVPGWDTHGLPIETALTKNKGVN-RKEMSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   +  Q   FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G 
Sbjct: 122 RKLCEQYAYEQIDRQREQFKRLGVRGDWDNPYITLTPEYEAQQIKVFGEMAKKGLIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L+    D  + +WTT
Sbjct: 182 KPVYWSPSSESALAEAEIEYKDKR-SPSIYVAFPVKDG----KGVLD---GDEKIVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  +AV+ +LQY+VVE          A   K                +VAS+L
Sbjct: 234 TPWTIPANLGIAVHPELQYSVVE----------ADGGK---------------YVVASEL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + +++ + G   + + KT+ GS+LE     HP  +R   +VI G+++TT++GTG VHTAP
Sbjct: 269 LQSVQKEIGWEHVTVLKTVKGSELEYVVAKHPFYDRDS-LVICGEHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD+ G  TEEA  F+G+    D N A+ + L E  +L+  
Sbjct: 328 GHGEDDFIVGQKYGLGVLCPVDERGYMTEEAPGFAGM-FYDDANKAITEKLQEVGALLKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H YP+DWRTK+PTIFRAT QWFAS++  R+  + A+ + KWVP
Sbjct: 387 SFITHSYPHDWRTKQPTIFRATAQWFASIDKIREQLLKAVEETKWVP 433



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 113/168 (67%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GAD+LRLWV+SVDY  DV I   +L+Q++++YRK+R T R++LGNL D+  
Sbjct: 604 VPAKVMEQLGADILRLWVASVDYQADVRISDNILKQVAEVYRKIRNTFRFMLGNLFDFNP 663

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++ + L  +D+Y L +L  ++  ++++YE+Y+F  I+  I  F  VDLS FYFD +
Sbjct: 664 AEHTVAIEQLREVDRYMLIKLNRLIDKVKQAYETYEFATIYHEINNFCTVDLSAFYFDFS 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY     +  RRS QTVL   L+++ +++APILPH A++VW  +P
Sbjct: 724 KDVLYIEAANNHERRSIQTVLYETLVALTKLVAPILPHTADEVWSYIP 771


>gi|390935118|ref|YP_006392623.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
           JW/SL-YS485]
 gi|389570619|gb|AFK87024.1| Isoleucyl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
           JW/SL-YS485]
          Length = 927

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/467 (45%), Positives = 301/467 (64%), Gaps = 32/467 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y  T++LPKT F M+AN   REPEI K W++  ++ +   KN G E F+LHDGPPYANGN
Sbjct: 3   YNKTLNLPKTDFPMKANLPTREPEILKKWENMDIYHKTLLKNKGKEKFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A+NK+LKD++ +YK ++ Y+  YVPGWD HGLPIE + +++L    + D+ P + 
Sbjct: 63  IHLGTAMNKVLKDMVVKYKTMRGYESPYVPGWDTHGLPIEQQAIKTLGI-KRNDVGPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     FA + ++ Q A F R GV  DW NPYLTL PEYEA QIEVFG+M+ +GYIY+G 
Sbjct: 122 RRVCRDFAFSQIEKQKAQFIRLGVRGDWQNPYLTLKPEYEAKQIEVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W     TALAEAE+EY +   S SIY  FR+V       G++++ L +L   +WTT
Sbjct: 182 KPVYWCTDCETALAEAEIEYSD-EKSDSIYVKFRVVDDLGKFKGIVDD-LSNLYFVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           T WT+PAN A+ +N    YA+                  ++ GN +        I+A D+
Sbjct: 240 TTWTIPANLAICLNPDFDYAL------------------AKYGNEI-------YIMAKDM 274

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + ++E + G +   I  T  GS+LE  +  HP+ +R   ++I G+++T E+GTG VHTAP
Sbjct: 275 LDSIEKETGLSNSQIIATFKGSELEGMKAKHPLFDRT-SLIILGEHVTQEAGTGCVHTAP 333

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED+V   KYGL +L+PVDD+G+FTE+AGK++GL    D N  + + L+   +L+  
Sbjct: 334 GHGEEDFVVGQKYGLDVLNPVDDKGRFTEKAGKYNGL-FYSDANKVIKEDLERANALLAS 392

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           + + H YP+ WR K P IFRATEQWFASV+GFR  A+ AI +V W+P
Sbjct: 393 KTFTHSYPHCWRCKNPVIFRATEQWFASVDGFRNEALKAIKEVNWIP 439



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 106/163 (65%), Gaps = 1/163 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P      YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+   
Sbjct: 611 PADVVKEYGADILRLWAVSADFTSDMRISKEILKQMTESYRKIRNTAKFLLSNLYDFDAD 670

Query: 630 NSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
             +  YD+L  ID++AL++   +VK++ E+++ Y+F++   ++  F IVD+SN Y D+ K
Sbjct: 671 KDLLPYDELLDIDKWALYKYNELVKDVTEAFDKYKFYEFLHLVHTFCIVDMSNLYLDILK 730

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
           DRLYT    S  R++ QT L   L   VR+IAP+L   A+++W
Sbjct: 731 DRLYTFPAASKERKAAQTTLYTILNGFVRIIAPVLTFTADEIW 773


>gi|389573336|ref|ZP_10163411.1| isoleucyl-tRNA synthetase [Bacillus sp. M 2-6]
 gi|388427033|gb|EIL84843.1| isoleucyl-tRNA synthetase [Bacillus sp. M 2-6]
          Length = 921

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/467 (44%), Positives = 295/467 (63%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   +EPEI + W +  ++  V ++  G   F+LHDGPPYANG+
Sbjct: 3   YKDTLLMPKTEFPMRGNLPNKEPEIQEEWAEKDIYQMVLERTKGRPTFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I R+K +  +   YVPGWD HGLPIE  + ++  +  +K+++ ++ 
Sbjct: 63  IHMGHALNKILKDFIVRFKSMNGFHAPYVPGWDTHGLPIETALTKN-KKVKRKEMSTAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q   FKR GV ADW+NPY+TL PEYEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEEYAWKQIEGQRNQFKRLGVRADWDNPYVTLKPEYEAQQILVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F++        G+L          +WTT
Sbjct: 182 KPVNWSPSSESALAEAEIEYKDKR-SPSIYVSFKVKDG----KGVLEN---GEQFIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  + V+  L+Y+V+++ +                            ++AS+L
Sbjct: 234 TPWTLPANLGICVHPNLEYSVLQVGAER-------------------------YVIASEL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  +    G  +  + KTL G +L+     HP+ +R   V++ GD++TT++GTG VHTAP
Sbjct: 269 VEQVAKTLGFEEYEVVKTLKGKELDKVVAAHPIYDRDSLVML-GDHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++ S+KYGL +L PVD++G  TEEA  F GL    D N A+ + L+ + +L   
Sbjct: 328 GHGEDDFIVSMKYGLDVLCPVDEKGVMTEEAPGFEGL-FYEDANKAITEQLEAKGALKKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +   H YP+DWRTKKPTI+RAT QWFAS++ FR+A +D I + KWVP
Sbjct: 387 DFITHSYPHDWRTKKPTIYRATAQWFASIKDFREALLDNIKETKWVP 433



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 109/168 (64%), Gaps = 1/168 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 605 PTKVAKQLGAEILRLWVSSVNYQADHPVSDDILKQVAEVYRKIRNTFRFLHGNLFDFDPA 664

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            N++  ++L  +DQY L +L  ++  ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 665 VNAVPVEELREVDQYILIKLNKLIDKVKKAYDDYEFAVVYHAIHNFCTIELSSFYLDFAK 724

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           D +Y        RRS QTV    L+++V++ APILPH A+++W +L F
Sbjct: 725 DVVYIEHADHPDRRSMQTVFYETLMALVKLTAPILPHTADELWSHLSF 772


>gi|254721429|ref|ZP_05183218.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A1055]
          Length = 921

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/471 (45%), Positives = 293/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++  V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYETVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F +        G       D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAFSVKDGKNVLEG-------DEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|410458069|ref|ZP_11311833.1| isoleucyl-tRNA synthetase [Bacillus azotoformans LMG 9581]
 gi|409931894|gb|EKN68868.1| isoleucyl-tRNA synthetase [Bacillus azotoformans LMG 9581]
          Length = 921

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/469 (45%), Positives = 292/469 (62%), Gaps = 40/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK T+ +PKT F MR N   REPEI   W++  ++  V  + +G   FVLHDGPPYANG
Sbjct: 2   EYKDTLLMPKTEFPMRGNLPKREPEIQAKWEEQNIYKMVQKRTEGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKILKD+I R+K +  Y   YVPGWD HGLPIE  + ++   D KK ++ ++
Sbjct: 62  DIHMGHALNKILKDMIVRFKSMSGYHAPYVPGWDTHGLPIETALTKNKKVDRKK-MSVAE 120

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   FKR GV  DW NPY+TL   YEA QI+VFG+M+ +GYIY+G
Sbjct: 121 FRKLCEEYAYEQVDCQREQFKRLGVRGDWENPYITLTKGYEAQQIKVFGEMAKKGYIYKG 180

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS +ALAEAE+EY +   S SIY  F++       +G       D  + +WT
Sbjct: 181 LKPVYWSPSSESALAEAEIEYQDKR-SASIYVAFQVKDGNGVLAG-------DEKIIIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + V+ +L+Y+VVE+                       D +K   ++AS 
Sbjct: 233 TTPWTIPANLGICVHPELEYSVVEV-----------------------DGEK--YVLASA 267

Query: 404 LVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+ ++    +W    V+ KT+ G++LEN    HP   R   V++ G+++TT++GTG VHT
Sbjct: 268 LLESVSKTIEWENVKVV-KTVKGAELENVVARHPFYERDSLVML-GEHVTTDAGTGCVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++D++   KYGL +L+PVDD+G FT +A  F GL    D N  V + L E  +L+
Sbjct: 326 APGHGEDDFLVGKKYGLDVLNPVDDKGYFTSQAPGFEGL-FYDDANKVVSEKLQEVGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                 H YP+DWRTKKP IFRAT QWFAS++ FR+  + AI +VKWVP
Sbjct: 385 KLTFITHSYPHDWRTKKPVIFRATAQWFASIKDFREQLLQAIKEVKWVP 433



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 121/206 (58%), Gaps = 17/206 (8%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           +P +     GAD+LRLWV+SVDY  DV +   +L+Q++++YRK+R T R+LLGNL D+  
Sbjct: 604 IPNKVMDQLGADILRLWVASVDYQADVRVSDAILKQVAEVYRKIRNTFRFLLGNLSDFDP 663

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + +S +DL  +D Y L +L  ++  +  SYE+Y F  I+  +  F  ++LS+FY DVA
Sbjct: 664 AVDKVSLNDLREVDVYILVKLNKVIDKVLTSYENYDFAGIYHAVNNFCTIELSSFYLDVA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD +Y     S  RRS QTVL   LL++ +++ PILPH AE+VW+ +P       G   E
Sbjct: 724 KDVIYIEAANSKNRRSIQTVLYETLLALTKLVTPILPHTAEEVWEYIP-------GVTEE 776

Query: 748 FVFESKWP---------VLDEKWRTF 764
            V     P          ++EKW TF
Sbjct: 777 SVQLVDMPQVTEIVNAAAIEEKWDTF 802


>gi|260495297|ref|ZP_05815424.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197075|gb|EEW94595.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 933

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/475 (44%), Positives = 292/475 (61%), Gaps = 41/475 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYA 161
           E  Y  T+ LPKT F M+AN   +EP+  K W + +++ +  +KN +GE F+LHDGPPYA
Sbjct: 3   EKEYTSTLHLPKTNFQMKANLPNKEPKYIKKWAEEKIYEKGLEKNKNGETFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGN H+GHALNKILKDII +YK  + YK  YVPGWD HGLPIEL+V++ +     ++++ 
Sbjct: 63  NGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQVVKEVGVSKAREMSA 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            ++R    K+AK  V  Q   F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI+
Sbjct: 123 LEIRKLCEKYAKKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIF 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGL 339
           +G KPV+WSP++ TALAEAE+EY + H S SIY   RM     +   LL++  F  D  +
Sbjct: 183 KGLKPVYWSPATETALAEAEIEYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAYV 235

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN A+ +NA   Y +                 K+  GN         +I
Sbjct: 236 LIWTTTPWTLPANVAICLNANFDYGLY----------------KTEKGN---------LI 270

Query: 400 VASDLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A DL  +     G K   + K   G DLE   Y HP   R   ++I GD++T ++GTG 
Sbjct: 271 LAKDLAESAFKDIGIKNFELIKEFKGKDLEYTTYKHPFLER-TGLIILGDHVTADAGTGA 329

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQ 517
           VHTAPGHGQEDYV  L Y LP++SP+D  G  TEEAG  F GL V  + N A+++YL + 
Sbjct: 330 VHTAPGHGQEDYVVGLAYKLPVISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIEYLTKT 388

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
             ++  +   H YP+DWR+K P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 389 GHILKMQEITHSYPHDWRSKTPVIFRATEQWFIRMEGGDLRERTLKVIDKINFIP 443



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/196 (43%), Positives = 127/196 (64%), Gaps = 15/196 (7%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +L+QMS+ YR++R T RY+LGN +D+    + + Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKVPYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 754
             S  RR+ QTV+   L+++ ++IAPIL   AE++W++LP A T E    +E +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMIAPILSFTAEEIWESLP-AETRE----SESIFLADWY 798

Query: 755 --------PVLDEKWR 762
                   P LDEKW+
Sbjct: 799 VNNDEYLKPELDEKWQ 814


>gi|423452801|ref|ZP_17429654.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG5X1-1]
 gi|401139360|gb|EJQ46922.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG5X1-1]
          Length = 921

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/471 (45%), Positives = 293/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEVNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V +                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVNVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+E   +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVEKTLEWENAEVV-KTVKGSELEYIVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFLVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQAVEETKWVP 432



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 116/177 (65%), Gaps = 2/177 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+  G N ++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFNPGKNKVAAAELREVDRYMLVKLNDLITKVKEAYEAYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P A
Sbjct: 716 SFYLDFAKDILYIEGANHQDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGA 772


>gi|229019098|ref|ZP_04175933.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229025342|ref|ZP_04181760.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|423418196|ref|ZP_17395285.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG3X2-1]
 gi|228735927|gb|EEL86504.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228742198|gb|EEL92363.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|401106469|gb|EJQ14430.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG3X2-1]
          Length = 921

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEQWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ G+++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 116/177 (65%), Gaps = 2/177 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+    N+++  +L  +D+Y L +L +++  ++++YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKDAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P A
Sbjct: 716 SFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGA 772


>gi|229104459|ref|ZP_04235126.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228678901|gb|EEL33111.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 921

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 293/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP   R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYERDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNII-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVP 770


>gi|421145637|ref|ZP_15605492.1| isoleucyl-tRNA ligase [Fusobacterium nucleatum subsp. fusiforme
           ATCC 51190]
 gi|395487961|gb|EJG08861.1| isoleucyl-tRNA ligase [Fusobacterium nucleatum subsp. fusiforme
           ATCC 51190]
          Length = 933

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 219/528 (41%), Positives = 312/528 (59%), Gaps = 56/528 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           Y  T+ LPKT F M+AN   +EP+  K W + +++ +  +KN +GE F+LHDGPPYANGN
Sbjct: 6   YTSTLHLPKTDFQMKANLPNKEPKYIKKWTEEKIYEKGLEKNKNGETFILHDGPPYANGN 65

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
            H+GHALNKILKDII +YK  + YK  YVPGWD HGLPIEL+V++ +     ++++  ++
Sbjct: 66  THIGHALNKILKDIIIKYKTFRGYKSPYVPGWDTHGLPIELQVVKEVGVAKAREMSALEI 125

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    K+A+  V  Q   F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI++G 
Sbjct: 126 RKLCEKYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIFKGL 185

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVW 342
           KPV+WSP++ TALAEAE+EY + HVS SIY   RM     +   LL++  F  D  + +W
Sbjct: 186 KPVYWSPATETALAEAEIEYYD-HVSPSIYV--RM----QTNKDLLDKIGFNEDAYVLIW 238

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+ +N    Y +                 K+  GN         +I+A 
Sbjct: 239 TTTPWTLPANVAICLNENFDYGLY----------------KTEKGN---------LILAK 273

Query: 403 DLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           DL  +     G +   + K   G DLE   Y HP   R   +VI GD++T ++GTG VHT
Sbjct: 274 DLAESAFKDIGIENFELIKEFKGKDLEYTTYKHPFLER-TGLVILGDHVTADAGTGAVHT 332

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSL 520
           APGHGQ+DYV  L Y LP++SP+D  G  TEEAG  F GL V  + N A+++YL +   +
Sbjct: 333 APGHGQDDYVVGLNYKLPVISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIEYLTKTGHI 391

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP------- 571
           +  +   H YP+DWR+K P IFRATEQWF  +EG   R+  + AI ++ ++P        
Sbjct: 392 LKMQEINHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKTLKAIDKINFIPSWGKNRIG 451

Query: 572 ---QEAPGYGADVLRLWVSSV-----DYTGDVMIGPQVLRQMSDIYRK 611
              +  P +     R+W   +     D T + +   ++L ++ D+ R+
Sbjct: 452 SMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDRICDLVRE 499



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 86/196 (43%), Positives = 128/196 (65%), Gaps = 15/196 (7%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+  ID++AL +LE + +N+ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRNVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 754
             S  RR+ QTV+   L+++ +++APIL   AE++W++LP A T E    AE +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMVAPILSFTAEEIWESLP-AETRE----AESIFLADWY 798

Query: 755 --------PVLDEKWR 762
                   P LDEKW+
Sbjct: 799 VNSDEYLKPELDEKWQ 814


>gi|301055386|ref|YP_003793597.1| isoleucyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
           CI]
 gi|300377555|gb|ADK06459.1| isoleucyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
           CI]
          Length = 921

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 218/473 (46%), Positives = 295/473 (62%), Gaps = 49/473 (10%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDL----VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           S+L      TLE  W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG
Sbjct: 265 SELFEPVAKTLE--WENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTG 320

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
            VHTAPGHG++D+V   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E 
Sbjct: 321 CVHTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEV 379

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 380 GALLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|229117392|ref|ZP_04246768.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|423378252|ref|ZP_17355536.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG1O-2]
 gi|423441373|ref|ZP_17418279.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG4X2-1]
 gi|423448401|ref|ZP_17425280.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG5O-1]
 gi|423533789|ref|ZP_17510207.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB2-9]
 gi|423540955|ref|ZP_17517346.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB4-10]
 gi|423547193|ref|ZP_17523551.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB5-5]
 gi|423623025|ref|ZP_17598803.1| isoleucyl-tRNA synthetase [Bacillus cereus VD148]
 gi|228666002|gb|EEL21468.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|401128995|gb|EJQ36678.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG5O-1]
 gi|401172143|gb|EJQ79364.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB4-10]
 gi|401178914|gb|EJQ86087.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB5-5]
 gi|401259798|gb|EJR65972.1| isoleucyl-tRNA synthetase [Bacillus cereus VD148]
 gi|401636518|gb|EJS54272.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG1O-2]
 gi|402418034|gb|EJV50334.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG4X2-1]
 gi|402464008|gb|EJV95708.1| isoleucyl-tRNA synthetase [Bacillus cereus HuB2-9]
          Length = 921

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 293/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP   R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWEKAEVV-KTVKGSELEYTVAKHPFYERDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVP 770


>gi|423385397|ref|ZP_17362653.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG1X1-2]
 gi|423528245|ref|ZP_17504690.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus HuB1-1]
 gi|401635453|gb|EJS53208.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG1X1-2]
 gi|402451908|gb|EJV83727.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus HuB1-1]
          Length = 921

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---FIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|229075653|ref|ZP_04208635.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228707429|gb|EEL59620.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 921

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 293/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP   R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWEKAEVV-KTVKGSELEYTVAKHPFYERDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVP 770


>gi|423389795|ref|ZP_17367021.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG1X1-3]
 gi|401641886|gb|EJS59603.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG1X1-3]
          Length = 921

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEQWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR G+ ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGIRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ G+++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 116/177 (65%), Gaps = 2/177 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+    N+++  +L  +D+Y L +L +++  ++++YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKDAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P A
Sbjct: 716 SFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGA 772


>gi|375008105|ref|YP_004981738.1| isoleucyl-tRNA synthetase [Geobacillus thermoleovorans CCB_US3_UF5]
 gi|359286954|gb|AEV18638.1| Isoleucyl-tRNA synthetase [Geobacillus thermoleovorans CCB_US3_UF5]
          Length = 924

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/469 (45%), Positives = 291/469 (62%), Gaps = 43/469 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +P+T F MR N   REPE+ K W++  ++ +V ++  G   FVLHDGPPYANG+
Sbjct: 3   YKETLLMPQTEFPMRGNLPKREPEMQKKWEEMDIYRKVQERTKGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPSK 223
           +HMGHALNKILKDII RYK +  Y   YVPGWD HGLPIE  +  Q +D   +K ++ ++
Sbjct: 63  IHMGHALNKILKDIIVRYKSMNGYCAPYVPGWDTHGLPIETALAKQGVD---RKSMSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   +  Q   FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G
Sbjct: 120 FRKLCEQYAYEQIDNQRRQFKRLGVRGDWDNPYITLKPEYEAQQIKVFGEMAKKGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G       D  + +WT
Sbjct: 180 LKPVYWSPSSESALAEAEIEYKDKR-SPSIYVAFPVKDGKGVLEG-------DERIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+AV+ +L Y VVE                         QK V   VA+ 
Sbjct: 232 TTPWTIPANLAIAVHPELDYHVVETNG----------------------QKYV---VAAA 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           LV ++  E  W    V+ KT+ G++LE     HP   R   +V+ G+++TT++GTG VHT
Sbjct: 267 LVESVANEVGWDAWSVV-KTVKGNELEYVVARHPFYERDS-LVVCGEHVTTDAGTGCVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++D++   KYGLP+L PVD+ G  TEEA  F+G+    D N A+ + L+E  +L+
Sbjct: 325 APGHGEDDFLVGQKYGLPVLCPVDERGYMTEEAPGFAGM-FYEDANKAITQKLEEVGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                 H YP+DWRTK+PTIFRAT QWFAS++  R   + AI + KW+P
Sbjct: 384 KLGFITHSYPHDWRTKQPTIFRATTQWFASIDKIRSELLQAIKETKWIP 432



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 113/168 (67%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP +    +GAD+LRLWV+SVDY  DV I   +L+Q+S++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQFGADILRLWVASVDYQADVRISDHILKQVSEVYRKIRNTFRFMLGNLFDFDP 662

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N++   +L  +D+Y L +L  ++  ++++Y+ Y F  ++  +  F  V+LS FY D+A
Sbjct: 663 NENAVPIGELGEVDRYMLAKLNKLIAKVKKAYDRYDFAAVYHEMNHFCTVELSAFYLDMA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY     S  RR+ QTVL   ++++ ++IAPILPH A++VW+++P
Sbjct: 723 KDILYIEAADSRARRAVQTVLYETVVALAKLIAPILPHTADEVWEHIP 770


>gi|448237304|ref|YP_007401362.1| isoleucyl-tRNA synthetase [Geobacillus sp. GHH01]
 gi|445206146|gb|AGE21611.1| isoleucyl-tRNA synthetase [Geobacillus sp. GHH01]
          Length = 924

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/467 (45%), Positives = 288/467 (61%), Gaps = 39/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REPE+ K W++  ++ +V ++  G   FVLHDGPPYANG+
Sbjct: 3   YKETLLMPKTDFPMRGNLPKREPEMQKKWEEMDIYRKVQERTKGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPSK 223
           +HMGHALNKILKDII RYK +  Y   YVPGWD HGLPIE  +  Q +D   +K ++ ++
Sbjct: 63  IHMGHALNKILKDIIVRYKSMSGYCAPYVPGWDTHGLPIETALAKQGVD---RKSMSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R +  ++A   +  Q   FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G
Sbjct: 120 FRKRCEQYAYEQIDNQRRQFKRLGVRGDWDNPYITLKPEYEAQQIKVFGEMAKKGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS +ALAEAE+EY +   S SIY  F + +      G       D  + +WT
Sbjct: 180 LKPVYWSPSSESALAEAEIEYKDKR-SPSIYVAFPVKNGKGVLEG-------DERIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+AV+  L Y VV++       +AA A   ++                  
Sbjct: 232 TTPWTIPANLAIAVHPDLDYHVVDVSGKRYVVAAALAESVAK------------------ 273

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
                E  W    V+ KT+ G +LE     HP   R   +V+ G+++TT++GTG VHTAP
Sbjct: 274 -----EIGWDAWSVV-KTVKGKELEYVVARHPFYERDS-LVVCGEHVTTDAGTGCVHTAP 326

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGLP+L PVD+ G  TEEA  F+G+    D N A+ + L+E  +L+  
Sbjct: 327 GHGEDDFLVGQKYGLPVLCPVDERGYMTEEAPGFAGM-FYEDANKAITQKLEEVGALLKL 385

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H YP+DWRTK+PTIFRAT QWFAS++  R   + AI + KW+P
Sbjct: 386 GFITHSYPHDWRTKQPTIFRATTQWFASIDKIRNELLQAIKETKWIP 432



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 113/168 (67%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP +    +GAD+LRLWV+SVDY  DV I   +L+Q+S++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQFGADILRLWVASVDYQADVRISDHILKQVSEVYRKIRNTFRFMLGNLFDFDP 662

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N++   +L  +D+Y L +L  ++  ++++Y+ Y F  ++  +  F  V+LS FY D+A
Sbjct: 663 NQNAVPIGELGEVDRYMLAKLNKLIAKVKKAYDRYDFAAVYHEMNHFCTVELSAFYLDMA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY     S  RR+ QTVL   ++++ ++IAPILPH A++VW+++P
Sbjct: 723 KDILYIEAADSRARRAVQTVLYETVVALAKLIAPILPHTADEVWEHIP 770


>gi|423604477|ref|ZP_17580370.1| isoleucyl-tRNA synthetase [Bacillus cereus VD102]
 gi|401245097|gb|EJR51455.1| isoleucyl-tRNA synthetase [Bacillus cereus VD102]
          Length = 921

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++     G+                       I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----GEK---------------------YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAIAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|19703419|ref|NP_602981.1| isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296328739|ref|ZP_06871253.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|81485032|sp|Q8RH47.1|SYI_FUSNN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|19713491|gb|AAL94280.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296154074|gb|EFG94878.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 933

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 217/528 (41%), Positives = 313/528 (59%), Gaps = 56/528 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           Y  T+ LPKT F M+AN   +EP+  K W + +++ +  +KN +GE F+LHDGPPYANGN
Sbjct: 6   YTSTLHLPKTDFQMKANLPNKEPKYIKKWTEEKIYEKGLEKNKNGETFILHDGPPYANGN 65

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
            H+GHALNKILKDII +YK  + ++  YVPGWD HGLPIEL+V++ +     ++++  ++
Sbjct: 66  THIGHALNKILKDIILKYKTFRGFRSPYVPGWDTHGLPIELQVVKEVGVGKAREMSALEI 125

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    K+AK  V  Q   F R GV  DW+NPYLTLDP +EA Q+E+FG++ + GYI++G 
Sbjct: 126 RKLCEKYAKKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYVNGYIFKGL 185

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVW 342
           KPV+WSP++ TALAEAE+EY + HVS SIY   RM     +   LL++  F  D+ + +W
Sbjct: 186 KPVYWSPATETALAEAEIEYYD-HVSPSIYV--RM----QANKDLLDKIGFNEDVYVLIW 238

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+ +N    Y +                 K+  GN         +I+A 
Sbjct: 239 TTTPWTLPANVAICLNENFDYGLY----------------KTEKGN---------LILAK 273

Query: 403 DLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           DL  +     G +   + K   G DLE   Y HP   R   ++I GD++T ++GTG VHT
Sbjct: 274 DLAESAFKDIGIENFELIKEFKGKDLEYTTYKHPFLER-TGLIILGDHVTADAGTGAVHT 332

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSL 520
           APGHGQ+DYV  L Y LP++SP+D  G  TEEAG  F GL V  + N A++K+L E   +
Sbjct: 333 APGHGQDDYVVGLAYKLPVISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIKHLTETGHI 391

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP------- 571
           +  +   H YP+DWR+K P IFRATEQWF  +EG   R+  +  I ++ ++P        
Sbjct: 392 LKMQEISHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKTLKVIDKINFIPSWGKNRIG 451

Query: 572 ---QEAPGYGADVLRLWVSSV-----DYTGDVMIGPQVLRQMSDIYRK 611
              +  P +     R+W   +     D T + +   ++L ++ D+ R+
Sbjct: 452 SMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDRICDLVRE 499



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 84/196 (42%), Positives = 128/196 (65%), Gaps = 15/196 (7%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 754
             S  RR+ QTV+   L+++ +++APIL   AE++W++LP A T E    +E +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMVAPILSFTAEEIWESLP-AETRE----SESIFLADWY 798

Query: 755 --------PVLDEKWR 762
                   P LDEKW+
Sbjct: 799 VNNDEYLKPELDEKWQ 814


>gi|56419671|ref|YP_146989.1| isoleucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81819763|sp|Q5L0V9.1|SYI_GEOKA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|56379513|dbj|BAD75421.1| isoleucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 924

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/467 (45%), Positives = 288/467 (61%), Gaps = 39/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REPE+ K W++  ++ +V ++  G   FVLHDGPPYANG+
Sbjct: 3   YKETLLMPKTDFPMRGNLPKREPEMQKKWEEMDIYRKVQERTKGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPSK 223
           +HMGHALNKILKDII RYK +  Y   YVPGWD HGLPIE  +  Q +D   +K ++ ++
Sbjct: 63  IHMGHALNKILKDIIVRYKSMSGYCAPYVPGWDTHGLPIETALAKQGVD---RKSMSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R +  ++A   +  Q   FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G
Sbjct: 120 FRKRCEQYAYEQIDNQRRQFKRLGVRGDWDNPYITLKPEYEAQQIKVFGEMAKKGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS +ALAEAE+EY +   S SIY  F + +      G       D  + +WT
Sbjct: 180 LKPVYWSPSSESALAEAEIEYKDKR-SPSIYVAFPVKNGKGVLEG-------DERIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+AV+  L Y VV++       +AA A   ++                  
Sbjct: 232 TTPWTIPANLAIAVHPDLDYHVVDVSGKRYVVAAALAESVAK------------------ 273

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
                E  W    V+ KT+ G +LE     HP   R   +V+ G+++TT++GTG VHTAP
Sbjct: 274 -----EIGWDAWSVV-KTVKGKELEYVVARHPFYERDS-LVVCGEHVTTDAGTGCVHTAP 326

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGLP+L PVD+ G  TEEA  F+G+    D N A+ + L+E  +L+  
Sbjct: 327 GHGEDDFLVGQKYGLPVLCPVDERGYMTEEAPGFAGM-FYEDANKAITQKLEEVGALLKL 385

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H YP+DWRTK+PTIFRAT QWFAS++  R   + AI + KW+P
Sbjct: 386 GFITHSYPHDWRTKQPTIFRATTQWFASIDKIRNELLQAIKETKWIP 432



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 114/168 (67%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP +    +GAD+LRLWV+SVDY  DV I   +L+Q+S++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQFGADILRLWVASVDYQADVRISDHILKQVSEVYRKIRNTFRFMLGNLFDFDP 662

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N++   +L  +D+Y L +L  ++  ++++Y+SY F  ++  +  F  V+LS FY D+A
Sbjct: 663 NQNAVPIGELGEVDRYMLAKLNKLIAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY     S  RR+ QTVL   ++++ ++IAPILPH A++VW+++P
Sbjct: 723 KDILYIEAADSRARRAVQTVLYETVVALAKLIAPILPHTADEVWEHIP 770


>gi|404329201|ref|ZP_10969649.1| isoleucyl-tRNA ligase [Sporolactobacillus vineae DSM 21990 = SL153]
          Length = 927

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/469 (45%), Positives = 292/469 (62%), Gaps = 43/469 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   +EP + K WDD  ++ +   +N+G+  F+LHDGPPYANGN
Sbjct: 3   YKKTLLMPKTGFKMRGNLPNKEPLMQKKWDDDHLYEQSVKRNEGKPQFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPSK 223
           +H+GHA NK+LKD+INRYK +  ++  YVPGWD HGLPIE ++  Q +D   +K ++ + 
Sbjct: 63  IHIGHAENKVLKDMINRYKSMTGFQTPYVPGWDTHGLPIEQQLAKQGID---RKKMSIAD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
           LR K  ++A   V  Q   FKR GV  DW++PYLTL+ E+EA QIEVFG M+ +GYIY+ 
Sbjct: 120 LREKCKEYALGQVARQKVQFKRLGVRGDWDHPYLTLNKEFEAEQIEVFGTMARKGYIYKD 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KK V+WSPSS +ALAEAE+EY +   S SI+  F +        G+LN    D  + +WT
Sbjct: 180 KKTVYWSPSSESALAEAEIEYKDVK-SYSIFVSFHVTDG----KGVLNN---DEEVVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+ VN K  Y+VVE              +K               +VA++
Sbjct: 232 TTPWTMPANLAICVNPKFDYSVVET-----------GGRK--------------FVVATE 266

Query: 404 LVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           LV  L     W     + +T  G  LE     HP  NR   ++I GD++T ++GTG VHT
Sbjct: 267 LVDKLTKTLNWENPKTL-RTFNGKALEGVVCRHPFYNRDS-LMILGDHVTLDAGTGCVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APG G++D+    KYGL IL PVDD+GK T+EA  F G+    D N  V++ L+E  +L+
Sbjct: 325 APGFGEDDFNVGKKYGLDILCPVDDKGKMTDEAPGFEGM-FYSDANEPVIQKLEEVHALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +  + H YP+DWRTKKP I+RAT+QWFAS++ FR   + AI +VKW+P
Sbjct: 384 KKGTFTHSYPHDWRTKKPVIWRATKQWFASIKAFRPEILKAIHEVKWIP 432



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 68/162 (41%), Positives = 111/162 (68%), Gaps = 1/162 (0%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-RVGNSISYD 635
           +GAD++RLWV+SVDY  D  +   +L Q++++YRK+R T+R++LGNLHD+    N++  +
Sbjct: 611 FGADIIRLWVASVDYQADARVSNDILAQVAEVYRKIRNTVRFMLGNLHDFNEKDNAVPVE 670

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
            LP +D+Y L +L  ++K  R+ YE YQF  +++ +Q +   DLS FY D+ KD LY   
Sbjct: 671 KLPELDKYMLLRLNELIKTCRDGYEEYQFQTVYKALQNYCTTDLSAFYMDIVKDALYVQP 730

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
             S  RRS QTVL   ++++ ++++P++PH AE++WQ +P A
Sbjct: 731 KDSLVRRSAQTVLFRTVVAMTKLLSPVIPHTAEEIWQYIPGA 772


>gi|402564761|ref|YP_006607485.1| isoleucyl-tRNA ligase [Bacillus thuringiensis HD-771]
 gi|423359068|ref|ZP_17336571.1| isoleucyl-tRNA synthetase [Bacillus cereus VD022]
 gi|423561699|ref|ZP_17537975.1| isoleucyl-tRNA synthetase [Bacillus cereus MSX-A1]
 gi|401084940|gb|EJP93186.1| isoleucyl-tRNA synthetase [Bacillus cereus VD022]
 gi|401201956|gb|EJR08821.1| isoleucyl-tRNA synthetase [Bacillus cereus MSX-A1]
 gi|401793413|gb|AFQ19452.1| isoleucyl-tRNA ligase [Bacillus thuringiensis HD-771]
          Length = 921

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|414160468|ref|ZP_11416736.1| isoleucyl-tRNA synthetase [Staphylococcus simulans ACS-120-V-Sch1]
 gi|410878366|gb|EKS26251.1| isoleucyl-tRNA synthetase [Staphylococcus simulans ACS-120-V-Sch1]
          Length = 915

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/469 (46%), Positives = 291/469 (62%), Gaps = 45/469 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EPEI K WD+  ++ ++ +KN G E ++LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPKKEPEIQKQWDEQDLYHKILEKNKGNETYILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           LHMGHALNKILKD I RYK +Q Y   YVPGWD HGLPIE    Q+L +    +K++  S
Sbjct: 63  LHMGHALNKILKDFIVRYKSMQGYYSPYVPGWDTHGLPIE----QALTKKGVKRKEMPVS 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R    +FA   +  Q   FKR GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+
Sbjct: 119 EFRELCKEFALEQIDIQKKDFKRLGVNGDFNDPYITLKPEYEAAQIRLFGEMADRGLIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           GKKPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++E   D    +W
Sbjct: 179 GKKPVYWSPSSESSLAEAEIEYHDKR-SPSIYVAFDVKDG----KGVVDE---DAKFIIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+ V+ +L+Y     Q  + G+                       +V +
Sbjct: 231 TTTPWTLPSNVAITVHPELKYG----QYKVNGEK---------------------YVVGT 265

Query: 403 DLVPTL-EA-KWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           DLV  + EA  W    + ++K   G +LE     HP  +R   +VI G ++TT++GTG V
Sbjct: 266 DLVEEVAEALDWDKDAIELEKIFTGKELEYVETQHPFVDR-VSLVINGLHVTTDAGTGAV 324

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++DY+   KYGLP++SP+DD+G FTEE G+F G+      N AV   L E  S
Sbjct: 325 HTAPGHGEDDYIVGQKYGLPVISPLDDKGVFTEEGGQFEGM-FYDKANKAVTDLLKENGS 383

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
           L+  +   H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI +  +
Sbjct: 384 LLKLQFITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAIEETHF 432



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 92/233 (39%), Positives = 135/233 (57%), Gaps = 8/233 (3%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSSVDY  D
Sbjct: 574 RGQSPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQIVKQKGADIARLWVSSVDYLSD 630

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVK 653
           V I  ++L+Q +D+YRK+R TLR++LGN++D+    +++   DL  +D+Y L +L     
Sbjct: 631 VRISDEILKQTADVYRKIRNTLRFMLGNVNDFNPSTDALDEADLLEVDRYLLNRLREFTA 690

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           NI + Y+++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 NIIKHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKQDSPKRRSMQTVLYQILV 750

Query: 714 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP--VLDEKWRTF 764
            + +++APIL H AE+VW  +P  +  E+      + E   P   L EKW TF
Sbjct: 751 DMTKLLAPILAHTAEEVWSYIP--HVEEESVHLANMPEVVEPDTALLEKWNTF 801


>gi|228902401|ref|ZP_04066555.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|434376999|ref|YP_006611643.1| isoleucyl-tRNA ligase [Bacillus thuringiensis HD-789]
 gi|228857145|gb|EEN01651.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|401875556|gb|AFQ27723.1| isoleucyl-tRNA ligase [Bacillus thuringiensis HD-789]
          Length = 921

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRNSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|229198007|ref|ZP_04324721.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228585486|gb|EEK43590.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 921

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++     G+                       I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----GEK---------------------YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|218899049|ref|YP_002447460.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
 gi|254782363|sp|B7IUQ5.1|SYI_BACC2 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|218542524|gb|ACK94918.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 921

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|399052166|ref|ZP_10741731.1| isoleucyl-tRNA synthetase [Brevibacillus sp. CF112]
 gi|398050032|gb|EJL42422.1| isoleucyl-tRNA synthetase [Brevibacillus sp. CF112]
          Length = 928

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 296/469 (63%), Gaps = 42/469 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  T+ LPKT F MR N   REP+I + W++  ++ +V  + +G  +FVLHDGPPYANG+
Sbjct: 3   YSKTLSLPKTDFPMRGNLPTREPQIQEKWEEQNIYQQVLARTEGRPSFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL--QSLDEDAKKDLTPS 222
           +H+GHALNKILKD I RYK +  +   Y+PGWD HGLPIE  ++  Q LD   ++++  +
Sbjct: 63  IHIGHALNKILKDFIVRYKSMAGFYAPYIPGWDTHGLPIEQAIVNAQGLD---RRNIEVN 119

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
             R +  ++A + +  Q   FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+
Sbjct: 120 DFRKRCEEYAWSYIDKQRDQFKRLGVRGDWENPYVTLLPEYEANQIRVFGEMAKKGYIYK 179

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G + V+WSPSS TALA+AE+EY +   S SIY  F++V       G L+    + G+ +W
Sbjct: 180 GLRCVYWSPSSETALADAEIEYKDKR-SPSIYVSFQVVDG----KGKLD---TETGVVIW 231

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A++++ +L+Y+VV+                        D +K   +VA+
Sbjct: 232 TTTPWTIPANLAISLHPELEYSVVK-----------------------ADGRK--FLVAN 266

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            L+     + G + V +  +  G +LE     HP+ +R  P+++ G+++T ++GTG VHT
Sbjct: 267 GLIEAASKEIGWENVEVLASFKGQELEGVVTKHPIYDRPSPLIL-GEHVTLDAGTGCVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++D+    KY L +L PVD EGK T EA  F GL    D N AV + L E  +L+
Sbjct: 326 APGHGEDDFAVGQKYNLGVLCPVDHEGKMTSEAPGFEGL-FYEDANKAVTEKLKENGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               + H YP+DWRTKKP I+RATEQWFAS++GFR+  ++AI  VKW+P
Sbjct: 385 KLNFFTHSYPHDWRTKKPVIYRATEQWFASIDGFREQMLEAIKNVKWIP 433



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 76/168 (45%), Positives = 111/168 (66%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP Q     GAD+LRLWV+SVDY  DV I   +L Q++++YRK+R T R+LLGNL  +  
Sbjct: 604 VPQQVIDKLGADILRLWVASVDYQADVRISDAILNQIAEVYRKIRNTFRFLLGNLDGFDP 663

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + ++Y+ L  +D+Y L +   +VK  R++Y+ YQF  +F  +  F ++DLS FY D+ 
Sbjct: 664 AKDRVAYEQLGELDRYVLAKAAKVVKRSRKAYDEYQFHTVFHAVHNFCVIDLSAFYLDIC 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KDRLY     S  RR+ QTV+   LLS+V+++APILPH A++VW  +P
Sbjct: 724 KDRLYVEAPDSVKRRAAQTVMYDCLLSLVKLVAPILPHTADEVWSFIP 771


>gi|206976763|ref|ZP_03237667.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217961316|ref|YP_002339884.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222097341|ref|YP_002531398.1| isoleucyl-tRNA synthetase [Bacillus cereus Q1]
 gi|375285821|ref|YP_005106260.1| isoleucyl-tRNA synthetase [Bacillus cereus NC7401]
 gi|423353599|ref|ZP_17331226.1| isoleucyl-tRNA synthetase [Bacillus cereus IS075]
 gi|423374307|ref|ZP_17351645.1| isoleucyl-tRNA synthetase [Bacillus cereus AND1407]
 gi|423567208|ref|ZP_17543455.1| isoleucyl-tRNA synthetase [Bacillus cereus MSX-A12]
 gi|254782366|sp|B7HLM9.1|SYI_BACC7 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|254782367|sp|B9IVX2.1|SYI_BACCQ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|206745073|gb|EDZ56476.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217068263|gb|ACJ82513.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221241399|gb|ACM14109.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus Q1]
 gi|358354348|dbj|BAL19520.1| isoleucyl-tRNA synthetase [Bacillus cereus NC7401]
 gi|401089412|gb|EJP97583.1| isoleucyl-tRNA synthetase [Bacillus cereus IS075]
 gi|401094219|gb|EJQ02301.1| isoleucyl-tRNA synthetase [Bacillus cereus AND1407]
 gi|401214296|gb|EJR21026.1| isoleucyl-tRNA synthetase [Bacillus cereus MSX-A12]
          Length = 921

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++     G+                       I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----GEK---------------------YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|30021984|ref|NP_833615.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206971359|ref|ZP_03232310.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218232297|ref|YP_002368695.1| isoleucyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228940984|ref|ZP_04103542.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228973915|ref|ZP_04134490.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980504|ref|ZP_04140814.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|229047580|ref|ZP_04193170.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229111365|ref|ZP_04240918.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229129173|ref|ZP_04258146.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229146467|ref|ZP_04274838.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229152093|ref|ZP_04280288.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296504390|ref|YP_003666090.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|384187956|ref|YP_005573852.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
 gi|410676271|ref|YP_006928642.1| isoleucine--tRNA ligase IleS [Bacillus thuringiensis Bt407]
 gi|423412301|ref|ZP_17389421.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG3O-2]
 gi|423431914|ref|ZP_17408918.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG4O-1]
 gi|423585695|ref|ZP_17561782.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD045]
 gi|423628990|ref|ZP_17604739.1| isoleucyl-tRNA synthetase [Bacillus cereus VD154]
 gi|423641026|ref|ZP_17616644.1| isoleucyl-tRNA synthetase [Bacillus cereus VD166]
 gi|423649757|ref|ZP_17625327.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD169]
 gi|452200337|ref|YP_007480418.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. IS5056]
 gi|81433828|sp|Q819R4.1|SYI1_BACCR RecName: Full=Isoleucine--tRNA ligase 1; AltName:
           Full=Isoleucyl-tRNA synthetase 1; Short=IleRS 1
 gi|254782365|sp|B7H6N1.1|SYI_BACC4 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|29897540|gb|AAP10816.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206734131|gb|EDZ51302.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218160254|gb|ACK60246.1| isoleucine--tRNA ligase [Bacillus cereus B4264]
 gi|228631442|gb|EEK88076.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228637100|gb|EEK93559.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228654410|gb|EEL10275.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228672141|gb|EEL27432.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228723827|gb|EEL75182.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228779324|gb|EEM27581.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785781|gb|EEM33785.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818663|gb|EEM64730.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|296325442|gb|ADH08370.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|326941665|gb|AEA17561.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
 gi|401104369|gb|EJQ12346.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG3O-2]
 gi|401116670|gb|EJQ24508.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG4O-1]
 gi|401233041|gb|EJR39537.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD045]
 gi|401268535|gb|EJR74583.1| isoleucyl-tRNA synthetase [Bacillus cereus VD154]
 gi|401280087|gb|EJR86009.1| isoleucyl-tRNA synthetase [Bacillus cereus VD166]
 gi|401283037|gb|EJR88934.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD169]
 gi|409175400|gb|AFV19705.1| isoleucine--tRNA ligase IleS [Bacillus thuringiensis Bt407]
 gi|452105730|gb|AGG02670.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. IS5056]
          Length = 921

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|423656756|ref|ZP_17632055.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD200]
 gi|401290497|gb|EJR96191.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD200]
          Length = 921

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+KK + GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVVKK-VKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|422939826|ref|ZP_16967197.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. animalis
           ATCC 51191]
 gi|339890810|gb|EGQ79880.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. animalis
           ATCC 51191]
          Length = 933

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 213/475 (44%), Positives = 291/475 (61%), Gaps = 41/475 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYA 161
           E  Y  T+ LPKT F M+AN   +EP+  K W + +++ +  +KN +GE F+LHDGPPYA
Sbjct: 3   EKEYTSTLHLPKTDFQMKANLPNKEPKYIKKWAEEKIYEKGLEKNKNGETFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGN H GHALNKILKDII +YK  + YK  YVPGWD HGLPIEL+V++ +     ++++ 
Sbjct: 63  NGNTHTGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQVVKEVGVSKAREMSA 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            ++R    K+AK  V  Q   F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI+
Sbjct: 123 LEIRKLCEKYAKKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIF 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGL 339
           +G KPV+WSP++ TALAEAE+EY + H S SIY   RM     +   LL++  F  D  +
Sbjct: 183 KGLKPVYWSPATETALAEAEIEYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAYV 235

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN A+ +NA   Y +                 K+  GN         +I
Sbjct: 236 LIWTTTPWTLPANVAICLNANFDYGLY----------------KTEKGN---------LI 270

Query: 400 VASDLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A DL  +     G K   + K   G DLE   Y HP   R   ++I GD++T ++GTG 
Sbjct: 271 LAKDLAESAFKDIGIKNFELIKEFKGKDLEYTTYKHPFLER-TGLIILGDHVTADAGTGA 329

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQ 517
           VHTAPGHGQEDYV  L Y LP++SP+D  G  TEEAG  F GL V  + N A+++YL + 
Sbjct: 330 VHTAPGHGQEDYVVGLAYKLPVISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIEYLTKT 388

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
             ++  +   H YP+DWR+K P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 389 GHILKMQEITHSYPHDWRSKTPVIFRATEQWFIRMEGGDLRERTLKVIDKINFIP 443



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 87/196 (44%), Positives = 127/196 (64%), Gaps = 15/196 (7%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +L+QMS+ YR++R T RY+LGN +D+    + I Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKILYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 754
             S  RR+ QTV+   L+++ ++IAPIL   AE++W++LP A T E    +E +F + W 
Sbjct: 744 KESVARRAAQTVMYEVLMTLTKMIAPILSFTAEEIWESLP-AETRE----SESIFLADWY 798

Query: 755 --------PVLDEKWR 762
                   P LDEKW+
Sbjct: 799 VNNDEYLKPELDEKWQ 814


>gi|228922648|ref|ZP_04085948.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|423582105|ref|ZP_17558216.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD014]
 gi|228837077|gb|EEM82418.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|401212984|gb|EJR19725.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD014]
          Length = 921

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 115/175 (65%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+    N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFNPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|228954172|ref|ZP_04116200.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229081148|ref|ZP_04213658.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|423426030|ref|ZP_17403061.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG3X2-2]
 gi|423437348|ref|ZP_17414329.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG4X12-1]
 gi|423503428|ref|ZP_17480020.1| isoleucyl-tRNA synthetase [Bacillus cereus HD73]
 gi|449090837|ref|YP_007423278.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. HD73]
 gi|228702192|gb|EEL54668.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228805492|gb|EEM52083.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|401110777|gb|EJQ18676.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG3X2-2]
 gi|401120503|gb|EJQ28299.1| isoleucyl-tRNA synthetase [Bacillus cereus BAG4X12-1]
 gi|402459649|gb|EJV91386.1| isoleucyl-tRNA synthetase [Bacillus cereus HD73]
 gi|449024594|gb|AGE79757.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. HD73]
          Length = 921

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|423635332|ref|ZP_17610985.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD156]
 gi|401278083|gb|EJR84019.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD156]
          Length = 921

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 115/175 (65%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+    N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFNPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|392971790|ref|ZP_10337183.1| isoleucine-tRNA ligase [Staphylococcus equorum subsp. equorum Mu2]
 gi|403046885|ref|ZP_10902354.1| isoleucyl-tRNA synthetase [Staphylococcus sp. OJ82]
 gi|392510329|emb|CCI60473.1| isoleucine-tRNA ligase [Staphylococcus equorum subsp. equorum Mu2]
 gi|402763581|gb|EJX17674.1| isoleucyl-tRNA synthetase [Staphylococcus sp. OJ82]
          Length = 916

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/464 (46%), Positives = 291/464 (62%), Gaps = 45/464 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + W+   ++ +V DKN+G  +++LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPKIQEEWEAQNIYQKVLDKNEGNPSYILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           LHMGHALNKILKD++ RYK ++ +   YVPGWD HGLPIE    Q+L +    +K+L+ +
Sbjct: 63  LHMGHALNKILKDMMIRYKSMRGFYAPYVPGWDTHGLPIE----QALTKKGVKRKELSIA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R K   FA   ++ Q   FKR GV  D++NPY+TL PEYEAAQI +FG+M+ +G IY+
Sbjct: 119 EFRKKCEAFALEQIENQKKDFKRLGVKGDFDNPYITLKPEYEAAQIRLFGEMADKGLIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           GKKPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +W
Sbjct: 179 GKKPVYWSPSSESSLAEAEIEYQDKR-SASIYVAFDVKDG----KGVVDS---DAKFIIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII--- 399
           TTTPWT+P+N A+ V+  L Y    +                          K +II   
Sbjct: 231 TTTPWTLPSNVAITVHPDLTYGQYNVNG------------------------KKYIIGKD 266

Query: 400 VASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           +ASD+V  L     T L ++K   GS+LE     HP  +R   +VI G ++TT++GTG V
Sbjct: 267 LASDVVEALGWDENT-LELEKEFKGSELEYVETQHPFVDR-VSLVINGLHVTTDAGTGCV 324

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++DYV   KY LP++SPVDD+G FTEEAG+F G+      N A+   L E+ +
Sbjct: 325 HTAPGHGEDDYVVGQKYKLPVISPVDDKGVFTEEAGQFEGM-FYDKANKAITDVLKEKDA 383

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
           L+  E   H YP+DWRTKKP IFRAT QWFAS++  RQ  +DAI
Sbjct: 384 LLNLEFITHSYPHDWRTKKPVIFRATPQWFASIDKVRQDILDAI 427



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 76/168 (45%), Positives = 110/168 (65%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP Q     GAD+ RLWVSSVDY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQIVKQKGADIARLWVSSVDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNVNDYNP 664

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++  DL  +D+Y L +L     N  + Y++Y +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 ATDALAEADLLEVDKYLLNRLREFTANTLDHYDNYDYLDIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY     S  RRS QTVL   ++ + +++APIL H AE+VW ++P
Sbjct: 725 KDILYIEERDSHKRRSMQTVLYQIVVDMTKLLAPILVHTAEEVWSHIP 772


>gi|304316679|ref|YP_003851824.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778181|gb|ADL68740.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 927

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/467 (45%), Positives = 299/467 (64%), Gaps = 32/467 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y  T++LPKT F M+AN   REPEI K WDD  ++ +  +KN G E F+LHDGPPYANG+
Sbjct: 3   YNKTLNLPKTDFPMKANLPTREPEILKKWDDMDIYHKSLNKNKGKEKFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A+NK+LKD+I +YK ++ +   YVPGWD HGLPIE + +++L    + ++ P + 
Sbjct: 63  IHLGTAMNKVLKDMIVKYKTMRGFDAPYVPGWDTHGLPIEQQAIKTLGI-KRNEVGPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     FA + ++ Q + F R GV  DW NPYLTL PEYEA QIEVFG+M+ +GYIY+G 
Sbjct: 122 RKVCRDFAFSQIEKQKSQFIRLGVRGDWQNPYLTLKPEYEAKQIEVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W     TALAEAE+EY +   S SIY  FR++       G++++ L +L   +WTT
Sbjct: 182 KPVYWCTDCETALAEAEIEYSD-ETSDSIYVKFRVIDDIGKFKGIVDD-LNNLYFVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           T WT+PAN A+ +N +  YA+                         K  K+++I+ A D+
Sbjct: 240 TTWTIPANLAICLNPEFDYALA------------------------KYGKEIYIM-AKDM 274

Query: 405 VPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           +  +E + G +   I  T  G DLE  R  HP+ +R   ++I GD++T E+GTG VHTAP
Sbjct: 275 LDDIERETGLENREIIATFKGKDLEGMRAKHPLFDRS-SLIILGDHVTLEAGTGCVHTAP 333

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED++   KYGL +L+PVDD+G FTE+AGK+ GL    D N  + + L++  +L+  
Sbjct: 334 GHGEEDFIVGQKYGLEVLNPVDDKGCFTEKAGKYKGL-FYADANKVIKEDLEKVNALLAS 392

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +   H YP+ WR K P IFRATEQWFASV+GFR  A++AI +V W+P
Sbjct: 393 KTLTHSYPHCWRCKNPVIFRATEQWFASVDGFRDEALNAIRKVNWIP 439



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 124/210 (59%), Gaps = 7/210 (3%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P      YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+   
Sbjct: 611 PADVVKEYGADILRLWTVSADFTSDMRISKEILKQMTESYRKIRNTAKFLLSNLYDFDAD 670

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            +++ Y++L  ID++AL++   ++K++  S++ Y+F+    ++  F IVD+SN Y D+ K
Sbjct: 671 KDALPYEELLDIDKWALYKFNELIKDVTSSFDRYEFYDFLHLVHTFCIVDMSNLYLDILK 730

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 748
           DRLYT    S  RR+ QT L   L   VR+IAP+L   A+++W  +      E  +  E 
Sbjct: 731 DRLYTFPAASKERRAAQTTLYTILDGFVRIIAPVLTFTADEIWSYMKH----EANNNYES 786

Query: 749 VFESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           V  + WP  ++ +    + E   W K+ ++
Sbjct: 787 VQLADWPQPNDAYDNKEIVEK--WNKLFDI 814


>gi|410455447|ref|ZP_11309327.1| isoleucyl-tRNA synthetase [Bacillus bataviensis LMG 21833]
 gi|409929274|gb|EKN66359.1| isoleucyl-tRNA synthetase [Bacillus bataviensis LMG 21833]
          Length = 923

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/468 (44%), Positives = 288/468 (61%), Gaps = 41/468 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REPEI   W++  ++  V ++  G   FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTEFPMRGNLPQREPEIQAKWEEMNIYQMVQERTKGRPIFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           +HMGHA+NKILKD+I RYK +  ++  YVPGWD HGLPIE    Q+L      +K++T +
Sbjct: 63  IHMGHAMNKILKDMIVRYKSMSGFRAPYVPGWDTHGLPIE----QALTNKGVKRKEMTVA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R    K+A   +  Q   FKR GV  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+
Sbjct: 119 EFRELCTKYALEQIDNQRTQFKRLGVRGDWENPYITLKPEYEAQQIKVFGEMAKKGYIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L+    D+ + +W
Sbjct: 179 GLKPVYWSPSSESALAEAEIEYQDKR-SASIYVGFNVKDG----KGVLD---TDIQIVIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  ++V+  L Y VV +                       + KK  I  A 
Sbjct: 231 TTTPWTIPANLGISVHPDLTYVVVSV-----------------------NDKKFLIAEAL 267

Query: 403 DLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
               T E  W   +VI+K + G++LE    VHP+ +R   V++ G+++TT++GTG VHTA
Sbjct: 268 LEAVTKEIGWEDAVVIQK-VKGAELERIVAVHPLYDRDSLVML-GEHVTTDAGTGCVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D+    KYGL +L PVDD+G  T EA  F GL      N  + + L++  +L+ 
Sbjct: 326 PGHGEDDFYIGQKYGLDVLCPVDDKGVMTSEAPGFEGL-FYDTANKPIAQALEDAGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                H YP+DWRTKKP I+RAT QWFAS++ FR   ++A+ + KWVP
Sbjct: 385 LSFITHSYPHDWRTKKPVIYRATAQWFASIKDFRDDLLEAVKETKWVP 432



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 80/199 (40%), Positives = 125/199 (62%), Gaps = 3/199 (1%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GAD+LRLWV+SVDY  DV +   +L+Q++++YRK+R T R+LLGNL D+  
Sbjct: 603 VPAKVMNQLGADILRLWVASVDYQADVRVSDAILKQVAEVYRKIRNTFRFLLGNLADFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N +SY++L  +DQ+ L +L  ++K +R +YE+Y+F  I+  +  F  +DLS FY D A
Sbjct: 663 TVNKVSYENLREVDQFMLVKLNKLIKYVRNAYENYEFAGIYHAVNNFCTLDLSAFYLDFA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAY--TLEDGSA 745
           KD LY        RR+ QTVL   LL++ ++++PIL H A++VW+ +P     +++    
Sbjct: 723 KDVLYIEAENHHDRRAIQTVLYESLLALTKLVSPILSHTADEVWKFIPNVQEESVQLTDF 782

Query: 746 AEFVFESKWPVLDEKWRTF 764
            E+   +   VL+EKW  F
Sbjct: 783 PEYRELAGSNVLEEKWTAF 801


>gi|423470109|ref|ZP_17446853.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG6O-2]
 gi|402437361|gb|EJV69385.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG6O-2]
          Length = 921

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 215/471 (45%), Positives = 293/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEVNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I R+K +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V +                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVNVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+E   +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVEKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFLVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQAVEETKWVP 432



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 116/177 (65%), Gaps = 2/177 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+  G N ++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFNPGENKVAAAELREVDRYMLVKLNDLITKVKEAYEAYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P A
Sbjct: 716 SFYLDFAKDILYIEGANHQDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGA 772


>gi|229168636|ref|ZP_04296358.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH621]
 gi|423592108|ref|ZP_17568139.1| isoleucyl-tRNA synthetase [Bacillus cereus VD048]
 gi|228614792|gb|EEK71895.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH621]
 gi|401232241|gb|EJR38743.1| isoleucyl-tRNA synthetase [Bacillus cereus VD048]
          Length = 921

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I R+K +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ G+++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 116/177 (65%), Gaps = 2/177 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL ++    N+++  +L  +D+Y L +L +++  ++++YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDNFNPSENTVAVAELREVDRYMLVKLNDLITKVKDAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P A
Sbjct: 716 SFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGA 772


>gi|423137732|ref|ZP_17125375.1| isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. animalis
           F0419]
 gi|371959201|gb|EHO76893.1| isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. animalis
           F0419]
          Length = 933

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/475 (44%), Positives = 292/475 (61%), Gaps = 41/475 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYA 161
           E  Y  T+ LPKT F M+AN   +EP+  K W + +++ +  +KN +GE F+LHDGPPYA
Sbjct: 3   EKEYTSTLHLPKTDFQMKANLPNKEPKYIKKWAEEKIYEKGLEKNKNGETFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGN H+GHALNKILKDII +YK  + YK  YVPGWD HGLPIEL+V++ +     ++++ 
Sbjct: 63  NGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQVVKEVGVSKAREMSA 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            ++R    K+A+  V  Q   F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI+
Sbjct: 123 LEIRKLCEKYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIF 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGL 339
           +G KPV+WSP++ TALAEAE+EY + H S SIY   RM     +   LL++  F  D  +
Sbjct: 183 KGLKPVYWSPATETALAEAEIEYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAYV 235

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN A+ +NA   Y +                 K+  GN         +I
Sbjct: 236 LIWTTTPWTLPANVAICLNANFDYGLY----------------KTEKGN---------LI 270

Query: 400 VASDLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A DL  +     G K   + K   G DLE   Y HP   R   ++I GD++T ++GTG 
Sbjct: 271 LAKDLAESAFKDIGIKNFELIKEFKGKDLEYTTYKHPFLER-TGLIILGDHVTADAGTGA 329

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQ 517
           VHTAPGHGQEDYV  L Y LP++SP+D  G  TEEAG  F GL V  + N A+++YL + 
Sbjct: 330 VHTAPGHGQEDYVVGLAYKLPVISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIEYLTKT 388

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
             ++  +   H YP+DWR+K P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 389 GHILKMQEITHSYPHDWRSKTPVIFRATEQWFIRMEGGDLRERTLKVIDKINFIP 443



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/196 (43%), Positives = 127/196 (64%), Gaps = 15/196 (7%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +L+QMS+ YR++R T RY+LGN +D+    + + Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKVPYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 754
             S  RR+ QTV+   L+++ ++IAPIL   AE++W++LP A T E    +E +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMIAPILSFTAEEIWESLP-AETRE----SESIFLADWY 798

Query: 755 --------PVLDEKWR 762
                   P LDEKW+
Sbjct: 799 VNNDEYLKPELDEKWQ 814


>gi|365159327|ref|ZP_09355508.1| isoleucyl-tRNA synthetase 1 [Bacillus sp. 7_6_55CFAA_CT2]
 gi|363625325|gb|EHL76366.1| isoleucyl-tRNA synthetase 1 [Bacillus sp. 7_6_55CFAA_CT2]
          Length = 921

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVM-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|423511930|ref|ZP_17488461.1| isoleucyl-tRNA synthetase [Bacillus cereus HuA2-1]
 gi|402450191|gb|EJV82025.1| isoleucyl-tRNA synthetase [Bacillus cereus HuA2-1]
          Length = 921

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I R+K +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ G+++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELECTVAKHPFYDRDSLVML-GEHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 116/177 (65%), Gaps = 2/177 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+    N+++  +L  +D+Y L +L +++  ++++YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKDAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P A
Sbjct: 716 SFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGA 772


>gi|423558542|ref|ZP_17534844.1| isoleucyl-tRNA synthetase [Bacillus cereus MC67]
 gi|401191810|gb|EJQ98832.1| isoleucyl-tRNA synthetase [Bacillus cereus MC67]
          Length = 921

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 293/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQETWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I R+K +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V +                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVNVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+E   +W    V+ KT+ GS+LE     HP  +R   V++ G+++TT++GTG V
Sbjct: 265 SELFETVEKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFLVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQAVEETKWVP 432



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 115/177 (64%), Gaps = 2/177 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+    N+++  +L  +D+Y L +L  ++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFNPSENTVAAAELREVDRYMLVKLNELITKVKEAYEAYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P A
Sbjct: 716 SFYLDFAKDILYIEGANHQDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGA 772


>gi|229180171|ref|ZP_04307515.1| Isoleucyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228603380|gb|EEK60857.1| Isoleucyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 921

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVM-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|163941635|ref|YP_001646519.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229013080|ref|ZP_04170245.1| Isoleucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|423489072|ref|ZP_17465754.1| isoleucyl-tRNA synthetase [Bacillus cereus BtB2-4]
 gi|423494797|ref|ZP_17471441.1| isoleucyl-tRNA synthetase [Bacillus cereus CER057]
 gi|423498411|ref|ZP_17475028.1| isoleucyl-tRNA synthetase [Bacillus cereus CER074]
 gi|423598793|ref|ZP_17574793.1| isoleucyl-tRNA synthetase [Bacillus cereus VD078]
 gi|423661265|ref|ZP_17636434.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM022]
 gi|423669470|ref|ZP_17644499.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM034]
 gi|423674351|ref|ZP_17649290.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM062]
 gi|254782368|sp|A9VTD5.1|SYI_BACWK RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|163863832|gb|ABY44891.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228748334|gb|EEL98194.1| Isoleucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|401150890|gb|EJQ58342.1| isoleucyl-tRNA synthetase [Bacillus cereus CER057]
 gi|401160460|gb|EJQ67838.1| isoleucyl-tRNA synthetase [Bacillus cereus CER074]
 gi|401237063|gb|EJR43520.1| isoleucyl-tRNA synthetase [Bacillus cereus VD078]
 gi|401298597|gb|EJS04197.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM034]
 gi|401301306|gb|EJS06895.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM022]
 gi|401309902|gb|EJS15235.1| isoleucyl-tRNA synthetase [Bacillus cereus VDM062]
 gi|402432320|gb|EJV64379.1| isoleucyl-tRNA synthetase [Bacillus cereus BtB2-4]
          Length = 921

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I R+K +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ G+++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 116/177 (65%), Gaps = 2/177 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+    N+++  +L  +D+Y L +L +++  ++++YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKDAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P A
Sbjct: 716 SFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGA 772


>gi|229061501|ref|ZP_04198845.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717735|gb|EEL69385.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 921

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I R+K +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ G+++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 116/177 (65%), Gaps = 2/177 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+    N+++  +L  +D+Y L +L +++  ++++YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKDAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P A
Sbjct: 716 SFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGA 772


>gi|431751288|ref|ZP_19539979.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2620]
 gi|430615728|gb|ELB52671.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2620]
          Length = 932

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/469 (44%), Positives = 296/469 (63%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W+++Q++ +    N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENQIYQKRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q   FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLKKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +        G+L+E   D+   +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KGILDE---DIAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++ + G  K+ + K  AG ++E     HP  +R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQTEIGWEKVTVLKEFAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVDWVIP 433



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|229134705|ref|ZP_04263514.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228648751|gb|EEL04777.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 921

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I R+K +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ G+++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 115/177 (64%), Gaps = 2/177 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+    N++   +L  +D+Y L +L +++  ++++YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFNPSENTVPVAELREVDRYMLVKLNDLITKVKDAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P A
Sbjct: 716 SFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGA 772


>gi|125973305|ref|YP_001037215.1| isoleucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256003786|ref|ZP_05428774.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417508|ref|ZP_06248528.1| isoleucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|385778782|ref|YP_005687947.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
 gi|419723201|ref|ZP_14250336.1| Isoleucyl-tRNA synthetase [Clostridium thermocellum AD2]
 gi|419724895|ref|ZP_14251950.1| Isoleucyl-tRNA synthetase [Clostridium thermocellum YS]
 gi|125713530|gb|ABN52022.1| isoleucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255992347|gb|EEU02441.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281408910|gb|EFB39168.1| isoleucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316940462|gb|ADU74496.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
 gi|380771515|gb|EIC05380.1| Isoleucyl-tRNA synthetase [Clostridium thermocellum YS]
 gi|380780968|gb|EIC10631.1| Isoleucyl-tRNA synthetase [Clostridium thermocellum AD2]
          Length = 931

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/466 (43%), Positives = 282/466 (60%), Gaps = 30/466 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  T++LP T F MRAN   REPE  K W++  ++ +   KN G+  FVLHDGPPYANG 
Sbjct: 5   YGKTLNLPNTDFPMRANLPQREPEFLKKWEEMDIYHKQLKKNAGKPKFVLHDGPPYANGG 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G ALNKILKDII +Y  ++ Y+  YVPGWD HGLPIE + ++      + +++P + 
Sbjct: 65  IHLGTALNKILKDIIIKYYSMKGYETPYVPGWDTHGLPIEQRAIKEFGL-KRHEVSPVEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    KFA   +  Q  +FKR GV ADW+NPY+TL+ E+EA QIEVFG+M+ +GYIY+G 
Sbjct: 124 RQACKKFALKYLDVQREAFKRLGVRADWDNPYITLNKEFEAKQIEVFGEMAKKGYIYKGL 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           +PV+W P   TALAEAE+EY E   + SIY  F +        GL++  L +    +WTT
Sbjct: 184 RPVYWCPECETALAEAEIEYAE-DTTLSIYVKFEVKDDKGKFGGLVDS-LKNTYFVIWTT 241

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           T WT+P N A+ +N + +Y +V                        K   + +II    L
Sbjct: 242 TTWTLPGNLAICLNGEFEYGLV------------------------KANGEYYIIALELL 277

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
              ++     +  +K    G++LE     HP  +R   V+I GD++T E+GTG VHTAPG
Sbjct: 278 ENVMKVAGIEEYEVKAKFTGAELEGMLCRHPFLDRD-SVIILGDHVTAEAGTGCVHTAPG 336

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG ED+    KY +P++ PVDD+G  T EAG+F+GL      N A+++ L    +L+  E
Sbjct: 337 HGAEDFEVCKKYDIPVIVPVDDKGYLTSEAGQFAGL-YYEKSNAAIIEQLKSTNNLLASE 395

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              H+YP+ WR K P IFRATEQWFAS+EGFR+ A+DAI  VKW+P
Sbjct: 396 KIVHQYPHCWRCKDPIIFRATEQWFASIEGFRKEAIDAISTVKWIP 441



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 135/208 (64%), Gaps = 7/208 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLWV+S DY  D+ I   +L+Q+S++YRK+R T RY+LGN++D+    + +SYD
Sbjct: 620 YGADILRLWVASSDYRTDIRISKDILKQLSEVYRKIRNTCRYILGNIYDFDPNKDMVSYD 679

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           ++  +D++AL +L  ++K + ++YE Y+F  +F  I  F +VD+SNFY D+ KDRLYT  
Sbjct: 680 EMNELDKWALMKLNGLIKKVNDAYEKYEFHLMFHAIHNFCVVDMSNFYLDIIKDRLYTSR 739

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             S  RRS QT +   L ++V+++AP+L   +E+VWQ +P   T    +  E V  + WP
Sbjct: 740 ADSKERRSAQTAMYEILEALVKMLAPVLAFTSEEVWQFMPHRST----NDPESVQLNYWP 795

Query: 756 VLDEKWRTFPVGEIYFWGKILEVIVVVT 783
             +EK+    + E   W +I+E+  VV+
Sbjct: 796 EPNEKYENAALKEK--WDRIIEIRDVVS 821


>gi|152976256|ref|YP_001375773.1| isoleucyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
 gi|189082319|sp|A7GRM0.1|SYI_BACCN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|152025008|gb|ABS22778.1| isoleucyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 921

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 211/470 (44%), Positives = 291/470 (61%), Gaps = 45/470 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK+T+ +PKT F MR N   REP I + W +  ++ +V ++  G   FVLHDGPPYANG+
Sbjct: 3   YKNTLLMPKTEFPMRGNLPKREPAIQEKWAEMNIYEKVQERTKGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           +HMGHALNK+LKD I RYK +  Y   YVPGWD HGLPIE    Q+L      +K++  +
Sbjct: 63  IHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMPVA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R   A++A   V  Q   FKR GV ADW++PY+TL+P YEA QI+VFG+M+ +GYIY+
Sbjct: 119 EFRKLCAEYAYEQVNRQREQFKRLGVRADWDHPYITLEPAYEAQQIKVFGEMAKKGYIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G+KPV+WSP+S +ALAEAE+EY +   S SIY  F +        G       D    +W
Sbjct: 179 GQKPVYWSPTSESALAEAEIEYKDKK-SASIYVAFEVKDGKDVLEG-------DEKFIIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  ++V+ KL+Y++V++                       D+K    I+AS
Sbjct: 231 TTTPWTLPANLGISVHPKLEYSIVKVN----------------------DEK---YIIAS 265

Query: 403 DLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           DL  T+    +W    V+ +T+ GS+LE     HP  +R   V++ G+++TT++GTG VH
Sbjct: 266 DLFDTVAKTLEWENPEVV-RTVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCVH 323

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG++D++   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +L
Sbjct: 324 TAPGHGEDDFIVGQKYGLEVLCPVDDKGVLTSEAPGFEGL-FYDKANKPITEKLEEVGAL 382

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +      H YP+DWRTKKP IFRAT QWFAS+E FR   + A+ + KWVP
Sbjct: 383 LKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRSELLQAVKETKWVP 432



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 125/207 (60%), Gaps = 19/207 (9%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+    ++++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLADFNPAQDAVAKAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW--------- 731
           +FY D AKD LY        RR+ QTVL   L+++ +++ PILPH A++VW         
Sbjct: 716 SFYLDFAKDILYIEAANHHDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIPGVTEE 775

Query: 732 ----QNLPFAYTLEDGSAAEFVFESKW 754
                ++P A  L+DG A     ++KW
Sbjct: 776 SVQLTDMPEAIELQDGEA----LKTKW 798


>gi|423518587|ref|ZP_17495068.1| isoleucyl-tRNA synthetase [Bacillus cereus HuA2-4]
 gi|401160795|gb|EJQ68170.1| isoleucyl-tRNA synthetase [Bacillus cereus HuA2-4]
          Length = 921

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I R+K +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ G+++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 432



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 116/177 (65%), Gaps = 2/177 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+    N+++  +L  +D+Y L +L +++  ++++YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFNPSENTVAVAELREVDRYMLVKLNDLITKVKDAYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P A
Sbjct: 716 SFYLDFAKDILYIEGADHADRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGA 772


>gi|138894671|ref|YP_001125124.1| isoleucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|166200211|sp|A4IM25.1|SYI_GEOTN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|134266184|gb|ABO66379.1| Isoleucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 924

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/469 (45%), Positives = 290/469 (61%), Gaps = 43/469 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +P+T F MR N   REPE+ K W++  ++ +V ++  G   FVLHDGPPYANG+
Sbjct: 3   YKETLLMPQTEFPMRGNLPKREPEMQKKWEEMDIYRKVQERTKGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPSK 223
           +HMGHALNKILKDII RYK +  +   YVPGWD HGLPIE  +  Q +D   +K ++ ++
Sbjct: 63  IHMGHALNKILKDIIVRYKSMSGFCAPYVPGWDTHGLPIETALTKQGVD---RKSMSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   +  Q   FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G
Sbjct: 120 FRKLCEQYAYEQIDNQRQQFKRLGVRGDWDNPYITLKPEYEAQQIKVFGEMAKKGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G       D  + +WT
Sbjct: 180 LKPVYWSPSSESALAEAEIEYKDKR-SPSIYVAFPVKDGKGVLQG-------DERIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+AV+  L Y +VE            AN +               +VA+ 
Sbjct: 232 TTPWTIPANLAIAVHPDLDYYIVE------------ANGQK-------------YVVAAA 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L  ++  E  W    V+ KT+ G +LE     HP   R   +V+ G+++TT++GTG VHT
Sbjct: 267 LAESVAKEVGWEAWSVV-KTVKGKELEYVVAKHPFYERDS-LVVCGEHVTTDAGTGCVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++D++   KYGLP+L PVD+ G  TEEA  F+G+    + N A+ + L+E  +L+
Sbjct: 325 APGHGEDDFIVGQKYGLPVLCPVDERGYMTEEAPGFAGM-FYDEANKAITQKLEEVGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                 H YP+DWRTK+PTIFRAT QWFAS++  R   +DAI + KWVP
Sbjct: 384 KLSFITHSYPHDWRTKQPTIFRATTQWFASIDKIRDQLLDAIKETKWVP 432



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 112/168 (66%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP +     GAD+LRLWV+SVDY  DV I   +L+Q+S++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQLGADILRLWVASVDYQADVRISDNILKQVSEVYRKIRNTFRFMLGNLFDFDP 662

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N++   +L  +D+Y L +L  ++  ++++Y+SY F  ++  +  F  V+LS FY D+A
Sbjct: 663 NQNAVPVGELGELDRYMLAKLNKLIAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY        RR+ QTVL   ++++ ++IAPILPH A++VW+++P
Sbjct: 723 KDILYIEAADCRARRAVQTVLYETVVALAKLIAPILPHTADEVWEHIP 770


>gi|404367837|ref|ZP_10973199.1| isoleucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313688929|gb|EFS25764.1| isoleucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 933

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 218/535 (40%), Positives = 316/535 (59%), Gaps = 53/535 (9%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYAN 162
           E  Y  T++LPKT+F M+AN   +EP+  K+W +  ++ +  +K   + F+LHDGPPYAN
Sbjct: 3   EKDYGATLNLPKTSFQMKANLPNKEPKFIKMWQEKDIYSKGLEKGT-QTFILHDGPPYAN 61

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G +H+GHALNKILKDII +YK L+ YKV YVPGWD HGLPIELKV + L   A K+++  
Sbjct: 62  GEIHIGHALNKILKDIILKYKRLRGYKVPYVPGWDTHGLPIELKVTEKLGSKA-KEMSAV 120

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           ++R   A++AK  V  Q   F R G+  DW NPYLTL PEYEA Q+EVFG++   GYI++
Sbjct: 121 EIRELCAEYAKKWVGIQREGFVRLGILGDWENPYLTLKPEYEAKQLEVFGELYENGYIFK 180

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KP++WSP + TALAEAE+EY +   S SIY   +  +      GL  E      + +W
Sbjct: 181 GLKPIYWSPVTETALAEAEIEY-KNVSSPSIYVKMKANADLLERLGLTEEAW----VVIW 235

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+ +N + +Y V                 K+  GN         +I+  
Sbjct: 236 TTTPWTLPANVAITLNPEFEYGVY----------------KTEKGN---------LILGK 270

Query: 403 DLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           DL      +    +  + K   G DLE   Y HP  +R   ++I G ++T ++GTG VHT
Sbjct: 271 DLAEKAFTEMDLEQFELIKEFQGKDLERTTYQHPFLDR-TGLIILGTHVTADAGTGCVHT 329

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQ+DYV  ++YGLP++SP++++G  TEEAG+F+GL      N A+  +L++   L+
Sbjct: 330 APGHGQDDYVVGVRYGLPVISPINNKGVLTEEAGEFAGL-FYAQANKAICAHLEKSGHLM 388

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP-------- 571
             +  EH YP+DWR++ P IFRATEQWF +VEG   R+ A+ A+  V+++P         
Sbjct: 389 KLKMIEHSYPHDWRSRTPVIFRATEQWFVNVEGSDIRERALKALDDVEFIPAWGRNRIGS 448

Query: 572 --QEAPGYGADVLRLWVSSV-----DYTGDVMIGPQVLRQMSDIYRKLRGTLRYL 619
             +  P +     R+W   +     + TG  +   ++L ++  I +K  GT  +L
Sbjct: 449 MLETRPDWCISRQRVWGVPIPVFFNEATGKEIFNKEILARIVGIVKK-EGTAAWL 502



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 114/168 (67%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP      YGAD+LRLW +SVDY  DV I   +L+QM++ YR++R T RY+LGN +D+  
Sbjct: 613 VPSDVIKLYGADILRLWCASVDYREDVKISDNILKQMAEAYRRVRNTARYILGNSNDFDP 672

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + + Y+ L  ID++AL +LE + + + E+Y+ Y+F+ +FQ I  F  +D+S FY D+ 
Sbjct: 673 NTDKVPYEQLMEIDKWALNKLEILKRKVTENYDRYEFYNLFQDIHYFAGIDMSAFYLDII 732

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KDRLYT GT S  RR+ QTV++  L+++ ++I PIL   +E++W+ LP
Sbjct: 733 KDRLYTEGTNSIERRAAQTVMTEILVTLTKMITPILSFTSEEIWETLP 780


>gi|75763516|ref|ZP_00743228.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488998|gb|EAO52502.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 803

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 4   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 63

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 64  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 119

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 120 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 179

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 180 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 231

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 232 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 266

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 267 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRNSLVML-GDHVTTDAGTGCV 324

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 325 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 383

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 384 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 434



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 120/185 (64%), Gaps = 2/185 (1%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 611
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 589 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 647

Query: 612 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 670
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 648 IRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 707

Query: 671 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 708 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 767

Query: 731 WQNLP 735
           W  +P
Sbjct: 768 WPYIP 772


>gi|403379006|ref|ZP_10921063.1| protein IleS [Paenibacillus sp. JC66]
          Length = 923

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/468 (45%), Positives = 287/468 (61%), Gaps = 40/468 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  T++LPKT F MR N    EP++ + WD+  ++ +V  KN G+  FVLHDGPPYANG+
Sbjct: 3   YGKTLNLPKTDFPMRGNLPQAEPKVQQWWDEINIYQQVQAKNQGKPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII RYK L+ Y   YVPGWD HGLPIE  +  S   D KK   P + 
Sbjct: 63  IHIGHALNKILKDIIVRYKSLRGYDAPYVPGWDTHGLPIEQAIANSGKVDRKKMSIP-EF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   V  Q A FKR GV  DW NPY+TL PEYEA QI VFG+M  +GYIY+G 
Sbjct: 122 REYCKEYALQWVDKQRAQFKRLGVRGDWENPYITLQPEYEALQIRVFGEMVNKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY E   S SIY  F +        G L E   D  + +WTT
Sbjct: 182 KPVYWSPSSESALAEAEIEYKE-KTSPSIYVAFPVKDG----KGKLPE---DAEVIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+ +L Y VV +           A +K               ++A  L
Sbjct: 234 TPWTLPANLGISVHPELPYVVVNV-----------AGRK--------------FVLAEGL 268

Query: 405 VPTLEAK--WGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           + T      W    VI  T+ GS+LE+    HP  +R   +V+ GD++T E+GTG VHTA
Sbjct: 269 LETAAKAIGWEAYEVI-STVQGSELEHVVCQHPFYDRDS-LVMTGDHVTLEAGTGCVHTA 326

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D+    KYG+ +L P+DD+GKFT EA  + G+      N  ++  L+++  L+ 
Sbjct: 327 PGHGEDDFAVGQKYGIGVLCPIDDQGKFTSEAPGYEGM-FYEKANAPIMDLLEQKGRLLK 385

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +   +H+Y +DWRTKKP I+RATEQWFAS++GFR+  ++ I  + W P
Sbjct: 386 QGTIQHQYAHDWRTKKPVIYRATEQWFASIDGFREKMLEEIRNINWTP 433



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 122/193 (63%), Gaps = 9/193 (4%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVDY  DV I   +L Q+S++YRK+R TLR+ LGNLH +    + + + +
Sbjct: 614 GADILRLWVSSVDYQADVRISDNILSQISEVYRKIRNTLRFFLGNLHGFDPRKDQVPFQE 673

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +D++A+  L  +++ + ++Y++Y+F  ++Q +  F  V++S FY D+ KDRLYT   
Sbjct: 674 MNELDRFAIIHLNRLIEKVLKAYDAYEFHMVYQAVHHFCAVEMSAFYLDIVKDRLYTEAP 733

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTL-----EDGSAAEFVFE 751
               R++ QTVL   L  I ++IAPILPH +++VW+++P    L     E     E V++
Sbjct: 734 NDPGRKAAQTVLYEALTVITKLIAPILPHTSDEVWKHIPGMTELSVQLTEMPEPNEAVYD 793

Query: 752 SKWPVLDEKWRTF 764
           S+   L+ KW  F
Sbjct: 794 SR---LEHKWSRF 803


>gi|423522273|ref|ZP_17498746.1| isoleucyl-tRNA synthetase 1, partial [Bacillus cereus HuA4-10]
 gi|401176022|gb|EJQ83221.1| isoleucyl-tRNA synthetase 1, partial [Bacillus cereus HuA4-10]
          Length = 889

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 293/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I R+K +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V +                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVNVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+E   +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVEKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  T EA  F G+      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFLVGKKYGLEVLCPVDDKGVLTNEAPGFEGI-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQAVEETKWVP 432



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 116/177 (65%), Gaps = 2/177 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+  G N ++  DL  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFNPGENKVAAADLREVDRYMLVKLNDLITKVKEAYEAYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P A
Sbjct: 716 SFYLDFAKDILYIEGANHQDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGA 772


>gi|423483486|ref|ZP_17460176.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG6X1-2]
 gi|401141037|gb|EJQ48592.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus BAG6X1-2]
          Length = 921

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 293/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ G+++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQAVEETKWVP 432



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 116/177 (65%), Gaps = 2/177 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+  G N ++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFNPGENKVAAAELREVDRYMLVKLNDLITKVKEAYEAYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P A
Sbjct: 716 SFYLDFAKDILYIEGANHQDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGA 772


>gi|373497895|ref|ZP_09588411.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 12_1B]
 gi|371962417|gb|EHO80018.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 12_1B]
          Length = 933

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 218/535 (40%), Positives = 316/535 (59%), Gaps = 53/535 (9%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYAN 162
           E  Y  T++LPKT+F M+AN   +EP+  K+W +  ++ +  +K   + F+LHDGPPYAN
Sbjct: 3   EKDYGATLNLPKTSFQMKANLPNKEPKFIKMWQEKDIYSKGLEKGT-QTFILHDGPPYAN 61

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G +H+GHALNKILKDII +YK L+ YKV YVPGWD HGLPIELKV + L   A K+++  
Sbjct: 62  GEIHIGHALNKILKDIILKYKRLRGYKVPYVPGWDTHGLPIELKVTEKLGSKA-KEMSAV 120

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           ++R   A++AK  V  Q   F R G+  DW NPYLTL PEYEA Q+EVFG++   GYI++
Sbjct: 121 EIRELCAEYAKKWVGIQREGFVRLGILGDWENPYLTLKPEYEAKQLEVFGELYENGYIFK 180

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KP++WSP + TALAEAE+EY +   S SIY   +  +      GL  E      + +W
Sbjct: 181 GLKPIYWSPVTETALAEAEIEY-KNVSSPSIYVKMKANADLLERLGLTEEAW----VVIW 235

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+ +N + +Y V                 K+  GN         +I+  
Sbjct: 236 TTTPWTLPANVAITLNPEFEYGVY----------------KTEKGN---------LILGK 270

Query: 403 DLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           DL      +    +  + K   G DLE   Y HP  +R   ++I G ++T ++GTG VHT
Sbjct: 271 DLAEKAFTEMDLEQFELIKEFQGKDLERTTYQHPFLDR-TGLIILGTHVTADAGTGCVHT 329

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQ+DYV  ++YGLP++SP++++G  TEEAG+F+GL      N A+  +L++   L+
Sbjct: 330 APGHGQDDYVVGVRYGLPVISPINNKGVLTEEAGEFAGL-FYAQANKAICAHLEKSGHLM 388

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP-------- 571
             +  EH YP+DWR++ P IFRATEQWF +VEG   R+ A+ A+  V+++P         
Sbjct: 389 KLKMIEHSYPHDWRSRTPVIFRATEQWFVNVEGSDIRERALKALDDVEFIPAWGRNRIGS 448

Query: 572 --QEAPGYGADVLRLWVSSV-----DYTGDVMIGPQVLRQMSDIYRKLRGTLRYL 619
             +  P +     R+W   +     + TG  +   ++L ++  I +K  GT  +L
Sbjct: 449 MLETRPDWCISRQRVWGVPIPVFFNEATGKEIFNKEILARIVGIVKK-EGTAAWL 502



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 114/168 (67%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP      YGAD+LRLW +SVDY  DV I   +L+QM++ YR++R T RY+LGN +D+  
Sbjct: 613 VPSDVIKLYGADILRLWCASVDYREDVKISDNILKQMAEAYRRVRNTARYILGNSNDFDP 672

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + + Y+ L  ID++AL +LE + + + E+Y+ Y+F+ +FQ I  F  +D+S FY D+ 
Sbjct: 673 NTDKVPYEQLMEIDKWALNKLEILKRKVTENYDRYEFYNLFQDIHYFAGIDMSAFYLDII 732

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KDRLYT GT S  RR+ QTV++  L+++ ++I PIL   +E++W+ LP
Sbjct: 733 KDRLYTEGTNSIERRAAQTVMTEILVTLTKMITPILSFTSEEIWETLP 780


>gi|228966849|ref|ZP_04127893.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228792948|gb|EEM40506.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 805

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 294/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 432



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 120/185 (64%), Gaps = 2/185 (1%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 611
           ++G  +    +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK
Sbjct: 587 LDGEGRKMSKSIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRK 645

Query: 612 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 670
           +R T R+LLGNL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  
Sbjct: 646 IRNTFRFLLGNLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHA 705

Query: 671 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
           I  F  +DLS+FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++V
Sbjct: 706 IHNFCTIDLSSFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEV 765

Query: 731 WQNLP 735
           W  +P
Sbjct: 766 WPYIP 770


>gi|336420097|ref|ZP_08600339.1| isoleucine--tRNA ligase [Fusobacterium sp. 11_3_2]
 gi|336162059|gb|EGN65048.1| isoleucine--tRNA ligase [Fusobacterium sp. 11_3_2]
          Length = 933

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 211/475 (44%), Positives = 292/475 (61%), Gaps = 41/475 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYA 161
           E  Y  T+ LPKT F M+AN   +EP+  K W + +++ +  +KN +GE F+LHDGPPYA
Sbjct: 3   EKEYTSTLHLPKTDFQMKANLPNKEPKYIKKWAEEKIYEKGLEKNKNGETFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGN H+GHALNKILKDII +YK  + YK  YVPGWD HGLPIEL+V++ +     ++++ 
Sbjct: 63  NGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQVVKEVGVSKAREMSA 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            ++R    K+A+  V  Q   F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI+
Sbjct: 123 LEIRKLCEKYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIF 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGL 339
           +G KPV+WSP++ TALAEAE+EY + H S SIY   RM     +   LL++  F  D  +
Sbjct: 183 KGLKPVYWSPATETALAEAEIEYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAYV 235

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN A+ +NA   Y +                 K+  GN         +I
Sbjct: 236 LIWTTTPWTLPANVAICLNANFDYGLY----------------KTEKGN---------LI 270

Query: 400 VASDLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A DL  +     G +   + K   G DLE   Y HP   R   ++I GD++T ++GTG 
Sbjct: 271 LAKDLAESAFKDIGIENFELIKEFKGKDLEYTTYKHPFLER-TGLIILGDHVTADAGTGA 329

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQ 517
           VHTAPGHGQEDYV  L Y LP++SP+D  G  TEEAG  F GL V  + N A+++YL + 
Sbjct: 330 VHTAPGHGQEDYVVGLAYKLPVISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIEYLTKT 388

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
             ++  +   H YP+DWR+K P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 389 GHILKMQEITHSYPHDWRSKTPVIFRATEQWFIRMEGGDLRERTLKVIDKINFIP 443



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/196 (43%), Positives = 127/196 (64%), Gaps = 15/196 (7%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +L+QMS+ YR++R T RY+LGN +D+    + + Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKVPYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 754
             S  RR+ QTV+   L+++ ++IAPIL   AE++W++LP A T E    +E +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMIAPILSFTAEEIWESLP-AETRE----SESIFLADWY 798

Query: 755 --------PVLDEKWR 762
                   P LDEKW+
Sbjct: 799 VNNDEYLKPELDEKWQ 814


>gi|421526558|ref|ZP_15973165.1| isoleucyl-tRNA ligase [Fusobacterium nucleatum ChDC F128]
 gi|402257115|gb|EJU07590.1| isoleucyl-tRNA ligase [Fusobacterium nucleatum ChDC F128]
          Length = 933

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 218/531 (41%), Positives = 313/531 (58%), Gaps = 56/531 (10%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYA 161
           E  Y  T+ LPKT F M+AN   +EP+  K W + +++ +  +KN +GE F+LHDGPPYA
Sbjct: 3   EKEYTSTLHLPKTDFQMKANLPNKEPKYIKKWAEEKIYEKGLEKNKNGETFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGN H+GHALNKILKDII +YK  + Y+  YVPGWD HGLPIEL+V++ +     ++++ 
Sbjct: 63  NGNTHIGHALNKILKDIIIKYKTFRGYRSPYVPGWDTHGLPIELQVVKEVGLGKAREMSA 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            ++R    K+A+  V  Q   F R GV  DW+NPYLTLDP +EA Q+E+FG++  +GYI+
Sbjct: 123 LEIRKLCEKYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYEKGYIF 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGL 339
           +G KPV+WSP++ TALAEAE+EY + H S SIY   RM     +   LL++  F  D  +
Sbjct: 183 KGLKPVYWSPATETALAEAEIEYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAFV 235

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN A+ +N    Y +                 K+  GN         +I
Sbjct: 236 LIWTTTPWTLPANVAICLNENFDYGLY----------------KTEKGN---------LI 270

Query: 400 VASDLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A DLV +     G +   + K   G +LE   Y HP   R   +VI GD++T ++GTG 
Sbjct: 271 LAKDLVESAFKDIGIENAELLKEFKGKELEYTTYQHPFLER-TGLVILGDHVTADAGTGA 329

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQ 517
           VHTAPGHGQ+DYV  L Y LP++SP+D  G  TEEAG  F GL V  + N A++K+L E 
Sbjct: 330 VHTAPGHGQDDYVVGLSYKLPVVSPIDHRGCLTEEAGDLFKGL-VYSEANKAIIKHLTET 388

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP---- 571
             ++  +   H YP+DWR+K P IFRATEQWF  +EG   R+  +  I ++ ++P     
Sbjct: 389 GHILKMQEISHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKTLKVIDEINFIPSWGKN 448

Query: 572 ------QEAPGYGADVLRLWVSSV-----DYTGDVMIGPQVLRQMSDIYRK 611
                 +  P +     R+W   +     D T + +   ++L ++ D+ R+
Sbjct: 449 RIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDRICDLVRE 499



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 85/196 (43%), Positives = 128/196 (65%), Gaps = 15/196 (7%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  VD+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAVDMSAFYLDIIKDRLYTEK 743

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 754
             S  RR+ QTV+   L+++ +++APIL   AE++W++LP A T E    +E +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMVAPILSFTAEEIWESLP-AETRE----SESIFLADWY 798

Query: 755 --------PVLDEKWR 762
                   P LDEKW+
Sbjct: 799 VNNDEYLNPELDEKWQ 814


>gi|422339724|ref|ZP_16420681.1| isoleucine tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           F0401]
 gi|355370567|gb|EHG17947.1| isoleucine tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           F0401]
          Length = 933

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 211/475 (44%), Positives = 292/475 (61%), Gaps = 41/475 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYA 161
           E  Y  T+ LPKT F M+AN   +EP+  K W + +++ +  +KN +GE F+LHDGPPYA
Sbjct: 3   EKEYTSTLHLPKTDFQMKANLPTKEPKYIKKWTEEKIYEKGLEKNKNGETFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGN H+GHALNKILKDII +YK  + +K  YVPGWD HGLPIEL+V++ +     ++++ 
Sbjct: 63  NGNTHIGHALNKILKDIIVKYKTFRGFKSPYVPGWDTHGLPIELQVVKEVGVAKAREMSA 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            ++R    K+A+  V  Q   F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI+
Sbjct: 123 LEIRKLCEKYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIF 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGL 339
           +G KPV+WSP++ TALAEAE+EY + HVS SIY   RM     +   LL++  F  D  +
Sbjct: 183 KGLKPVYWSPATETALAEAEIEYYD-HVSPSIYV--RM----QANKDLLDKIGFNEDAYV 235

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN A+ +N    Y +                 K+  GN         +I
Sbjct: 236 LIWTTTPWTLPANVAICLNENFDYGLY----------------KTEKGN---------LI 270

Query: 400 VASDLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A DL  +     G +   + K   G DLE   Y HP   R   +VI GD++T ++GTG 
Sbjct: 271 LAKDLAESAFKDIGIENAELIKEFKGKDLEYTTYKHPFLER-TGLVILGDHVTADAGTGA 329

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQ 517
           VHTAPGHGQ+DYV  L Y LP++SP+D  G  TEEAG  F GL V  + N A++K+L E 
Sbjct: 330 VHTAPGHGQDDYVVGLNYKLPVISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIKHLTET 388

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
             ++  +   H YP+DWR+K P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 389 GHILKMQEISHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKTLKVIDKINFIP 443



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/196 (42%), Positives = 128/196 (65%), Gaps = 15/196 (7%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 754
             S  RR+ QTV+   L+++ +++APIL   AE++W+++P A T E    AE +F + W 
Sbjct: 744 KDSIARRAAQTVMYEVLMTLTKMVAPILSFTAEEIWESIP-AETRE----AESIFLADWY 798

Query: 755 --------PVLDEKWR 762
                   P LDEKW+
Sbjct: 799 VNNDEYLKPELDEKWQ 814


>gi|289765591|ref|ZP_06524969.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717146|gb|EFD81158.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 933

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 211/475 (44%), Positives = 291/475 (61%), Gaps = 41/475 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYA 161
           E  Y  T+ LPKT F M+AN   +EP+  K W + +++ +  +KN +GE F+LHDGPPYA
Sbjct: 3   EKEYTSTLHLPKTDFQMKANLPNKEPKYIKKWAEEKIYEKGLEKNKNGETFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGN H+GHALNKILKDII +YK  + YK  YVPGWD HGLPIEL+V++ +     ++++ 
Sbjct: 63  NGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQVVKEVGVSKAREMSA 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            ++R    K+A+  V  Q   F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI+
Sbjct: 123 LEIRKLCEKYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIF 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGL 339
           +G KPV+WSP++ TALAEAE+EY + H S SIY   RM     +   LL++  F  D  +
Sbjct: 183 KGLKPVYWSPATETALAEAEIEYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAYV 235

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN A+ +NA   Y +                 K+  GN         +I
Sbjct: 236 LIWTTTPWTLPANVAICLNANFDYGLY----------------KTEKGN---------LI 270

Query: 400 VASDLVPTLEAKWGT-KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A DL  +     G     + K   G DLE   Y HP   R   ++I GD++T ++GTG 
Sbjct: 271 LAKDLAESAFKDIGIGNFELIKEFKGKDLEYTTYKHPFLER-TGLIILGDHVTADAGTGA 329

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQ 517
           VHTAPGHGQEDYV  L Y LP++SP+D  G  TEEAG  F GL V  + N A+++YL + 
Sbjct: 330 VHTAPGHGQEDYVVGLAYKLPVISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIEYLTKT 388

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
             ++  +   H YP+DWR+K P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 389 GHILKMQEITHSYPHDWRSKTPVIFRATEQWFIRMEGGDLRERTLKVIDKINFIP 443



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/196 (43%), Positives = 127/196 (64%), Gaps = 15/196 (7%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +L+QMS+ YR++R T RY+LGN +D+    + + Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKVPYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 754
             S  RR+ QTV+   L+++ ++IAPIL   AE++W++LP A T E    +E +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMIAPILSFTAEEIWESLP-AETRE----SESIFLADWY 798

Query: 755 --------PVLDEKWR 762
                   P LDEKW+
Sbjct: 799 VNNDEYLKPELDEKWQ 814


>gi|297530697|ref|YP_003671972.1| isoleucyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297253949|gb|ADI27395.1| isoleucyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 924

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/467 (44%), Positives = 286/467 (61%), Gaps = 39/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +P+T F MR N   REPE+ K W++  ++ +V ++  G   FVLHDGPPYANG+
Sbjct: 3   YKETLLMPQTEFPMRGNLPKREPEMQKKWEEMDIYRKVQERTKGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPSK 223
           +HMGHALNKILKDII RYK +  Y   YVPGWD HGLPIE  +  Q +D   +K ++ ++
Sbjct: 63  IHMGHALNKILKDIIVRYKSMNGYCAPYVPGWDTHGLPIETALAKQGVD---RKSMSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R +  ++A   +  Q   FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G
Sbjct: 120 FRKRCEQYAYEQIDNQRRQFKRLGVRGDWDNPYITLKPEYEAQQIKVFGEMAKKGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G       D  + +WT
Sbjct: 180 LKPVYWSPSSESALAEAEIEYKDKR-SPSIYVAFPVKDGKGVLEG-------DERIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+AV+  L Y VV++       +AA A   ++                  
Sbjct: 232 TTPWTIPANLAIAVHPDLDYHVVDVSGKRYVVAAALAESVAK------------------ 273

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
                E  W    V+ KT+ G +LE     HP   R   +V+ G+++TT++GTG VHTAP
Sbjct: 274 -----EIGWDAWSVV-KTVKGKELEYVVAKHPFYERDS-LVVCGEHVTTDAGTGCVHTAP 326

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGLP+L PVD+ G  TEEA  F G+    D N A+ + L+E  +L+  
Sbjct: 327 GHGEDDFLVGQKYGLPVLCPVDERGYMTEEAPGFEGM-FYEDANKAITQKLEEVGALLKL 385

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H YP+DWRTK+PTIFRAT QWFAS++  R   + AI + KW+P
Sbjct: 386 GFITHSYPHDWRTKQPTIFRATTQWFASIDKIRSELLQAIKETKWIP 432



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 114/168 (67%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP +    +GAD+LRLWV+SVDY  DV I   +L+Q+S++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQFGADILRLWVASVDYQADVRISDHILKQVSEVYRKIRNTFRFMLGNLFDFDP 662

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N++   +L  +D+Y L +L  ++  ++++Y+SY F  ++  +  F  V+LS FY D+A
Sbjct: 663 NQNAVPIGELGEVDRYMLAKLNKLIAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY     S  RR+ QTVL   ++++ ++IAPILPH A++VW+++P
Sbjct: 723 KDILYIEAADSRARRAVQTVLYETVVALAKLIAPILPHTADEVWEHIP 770


>gi|336401824|ref|ZP_08582581.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 21_1A]
 gi|336160422|gb|EGN63470.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 21_1A]
          Length = 933

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 211/475 (44%), Positives = 291/475 (61%), Gaps = 41/475 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYA 161
           E  Y  T+ LPKT F M+AN   +EP+  K W + +++ +  +KN +GE F+LHDGPPYA
Sbjct: 3   EKEYTSTLHLPKTDFQMKANLPNKEPKYIKKWAEEKIYEKGLEKNKNGETFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGN H+GHALNKILKDII +YK  + YK  YVPGWD HGLPIEL+V++ +     ++++ 
Sbjct: 63  NGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQVVKEVGVSKAREMSA 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            ++R    K+A+  V  Q   F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI+
Sbjct: 123 LEIRKLCEKYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIF 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGL 339
           +G KPV+WSP++ TALAEAE+EY + H S SIY   RM     +   LL++  F  D  +
Sbjct: 183 KGLKPVYWSPATETALAEAEIEYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAYV 235

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN A+ +NA   Y +                 K+  GN         +I
Sbjct: 236 LIWTTTPWTLPANVAICLNANFDYGLY----------------KTEKGN---------LI 270

Query: 400 VASDLVPTLEAKWGT-KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A DL  +     G     + K   G DLE   Y HP   R   ++I GD++T ++GTG 
Sbjct: 271 LAKDLAESAFEDIGIGNFELIKEFKGKDLEYTTYKHPFLER-TGLIILGDHVTADAGTGA 329

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQ 517
           VHTAPGHGQEDYV  L Y LP++SP+D  G  TEEAG  F GL V  + N A+++YL + 
Sbjct: 330 VHTAPGHGQEDYVVGLAYKLPVISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIEYLTKT 388

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
             ++  +   H YP+DWR+K P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 389 GHILKMQEITHSYPHDWRSKTPVIFRATEQWFIRMEGGDLRERTLKVIDKINFIP 443



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/196 (43%), Positives = 127/196 (64%), Gaps = 15/196 (7%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +L+QMS+ YR++R T RY+LGN +D+    + + Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKVPYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 754
             S  RR+ QTV+   L+++ ++IAPIL   AE++W++LP A T E    +E +F + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMIAPILSFTAEEIWESLP-AETRE----SESIFLADWY 798

Query: 755 --------PVLDEKWR 762
                   P LDEKW+
Sbjct: 799 VNNDEYLKPELDEKWQ 814


>gi|340758052|ref|ZP_08694644.1| isoleucyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
 gi|251836342|gb|EES64879.1| isoleucyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
          Length = 933

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 217/535 (40%), Positives = 317/535 (59%), Gaps = 53/535 (9%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYAN 162
           E  Y  T++LPKT+F M+AN   +EP+  K+W +  ++ +   K   + F+LHDGPPYAN
Sbjct: 3   EKDYGATLNLPKTSFQMKANLPNKEPKFIKMWQEKDIYSK-GLKKGTKTFILHDGPPYAN 61

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G +H+GHALNKILKDII +YK L+ YKV YVPGWD HGLPIELKV + L   A K+++ +
Sbjct: 62  GEIHIGHALNKILKDIILKYKRLRGYKVPYVPGWDTHGLPIELKVTEKLGSKA-KEMSAA 120

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           ++R   A++AK  V  Q   F R G+  DW NPYLTL+PEYEA Q+EVFG++   GYI++
Sbjct: 121 EIRELCAEYAKKWVGIQKEGFVRLGILGDWENPYLTLNPEYEAKQLEVFGELYENGYIFK 180

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KP++WSP + TALAEAE+EY +   S SIY   +  +      GL  E      + +W
Sbjct: 181 GLKPIYWSPVTETALAEAEIEY-KNVSSPSIYVRMKANADLLERLGLTEEAW----VVIW 235

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+++N   +Y V                 K+  GN         +I+  
Sbjct: 236 TTTPWTLPANVAISLNPDFEYGVY----------------KTEKGN---------LILGK 270

Query: 403 DLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           DL      +    +  + K   G DLE   Y HP   R   +++ G ++T ++GTG VHT
Sbjct: 271 DLAEKAFTEMDLEQFELIKEFQGKDLERATYQHPFLERTGMIIL-GTHVTADAGTGCVHT 329

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQ+DYV  ++YGLP++SP++++G  TEEAG+F+GL  +   N A+  +L++   L+
Sbjct: 330 APGHGQDDYVVGVRYGLPVISPINNKGVLTEEAGEFAGLFYV-QANKAICAHLEKTGHLM 388

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP-------- 571
             +  EH YP+DWR+K P IFRATEQWF +VEG   R+ A+ A+  V+++P         
Sbjct: 389 KLKMIEHSYPHDWRSKTPVIFRATEQWFVNVEGSDIREKALKALDNVEFIPAWGRNRIGS 448

Query: 572 --QEAPGYGADVLRLWVSSV-----DYTGDVMIGPQVLRQMSDIYRKLRGTLRYL 619
             +  P +     R+W   +     +  G  +   ++L ++ +I +K  GT  +L
Sbjct: 449 MLETRPDWCISRQRVWGVPIPVFFNEANGKEIFNKEILARIVEIVKK-EGTAAWL 502



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 76/168 (45%), Positives = 115/168 (68%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP      YGAD+LRLW +SVDY  DV I   +L+QM++ YR++R T RY+LGN +D+  
Sbjct: 613 VPADVIKLYGADILRLWCASVDYREDVKISDNILKQMAEAYRRVRNTARYILGNSNDFDP 672

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + + YD L  ID++AL +LE + + + E+Y+ Y+F+ +FQ I  F  +D+S FY D+ 
Sbjct: 673 NTDKVPYDKLMEIDKWALNKLEILKRKVTENYDRYEFYNLFQDIHYFAGIDMSAFYLDII 732

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KDRLYT GT S  RR+ QTV++  L+++ ++IAPIL   +E++W+ LP
Sbjct: 733 KDRLYTEGTNSIERRAAQTVMTEILVTLTKMIAPILSFTSEEIWETLP 780


>gi|261419333|ref|YP_003253015.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319766149|ref|YP_004131650.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261375790|gb|ACX78533.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317111015|gb|ADU93507.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 924

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/467 (44%), Positives = 286/467 (61%), Gaps = 39/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +P+T F MR N   REPE+ K W++  ++ +V ++  G   FVLHDGPPYANG+
Sbjct: 3   YKETLLMPQTEFPMRGNLPKREPEMQKKWEEMDIYRKVQERTKGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPSK 223
           +HMGHALNKILKDII RYK +  Y   YVPGWD HGLPIE  +  Q +D   +K ++ ++
Sbjct: 63  IHMGHALNKILKDIIVRYKSMNGYCAPYVPGWDTHGLPIETALAKQGVD---RKSMSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R +  ++A   +  Q   FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G
Sbjct: 120 FRKRCEQYAYEQIDNQRRQFKRLGVRGDWDNPYITLKPEYEAQQIKVFGEMAKKGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G       D  + +WT
Sbjct: 180 LKPVYWSPSSESALAEAEIEYKDKR-SPSIYVAFPVKDGKGVLEG-------DERIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+AV+  L Y VV++       +AA A   ++                  
Sbjct: 232 TTPWTIPANLAIAVHPDLDYHVVDVSGKRYVVAAALAESVAK------------------ 273

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
                E  W    V+ KT+ G +LE     HP   R   +V+ G+++TT++GTG VHTAP
Sbjct: 274 -----EIGWDAWSVV-KTVKGKELEYVVAKHPFYERDS-LVVCGEHVTTDAGTGCVHTAP 326

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGLP+L PVD+ G  TEEA  F G+    D N A+ + L+E  +L+  
Sbjct: 327 GHGEDDFLVGQKYGLPVLCPVDERGYMTEEAPGFEGM-FYEDANKAITQKLEEVGALLKL 385

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H YP+DWRTK+PTIFRAT QWFAS++  R   + AI + KW+P
Sbjct: 386 GFITHSYPHDWRTKQPTIFRATTQWFASIDKIRNELLQAIKETKWIP 432



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 114/168 (67%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP +    +GAD+LRLWV+SVDY  DV I   +L+Q+S++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQFGADILRLWVASVDYQADVRISDHILKQVSEVYRKIRNTFRFMLGNLFDFDP 662

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N++   +L  +D+Y L +L  ++  ++++Y+SY F  ++  +  F  V+LS FY D+A
Sbjct: 663 NQNAVPIGELGEVDRYMLAKLNKLIAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY     S  RR+ QTVL   ++++ ++IAPILPH A++VW+++P
Sbjct: 723 KDILYIEAADSRARRAVQTVLYETVVALAKLIAPILPHTADEVWEHIP 770


>gi|227550467|ref|ZP_03980516.1| isoleucine--tRNA ligase [Enterococcus faecium TX1330]
 gi|227180368|gb|EEI61340.1| isoleucine--tRNA ligase [Enterococcus faecium TX1330]
          Length = 932

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/469 (44%), Positives = 295/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W+++Q++ +    N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENQIYQKRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q   FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLKKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +        G+L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++ + G  K+ + K  AG ++E     HP  +R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQTEIGWEKVTVLKEFAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVDWVIP 433



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|293377353|ref|ZP_06623557.1| isoleucine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|431031530|ref|ZP_19490704.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1590]
 gi|292644045|gb|EFF62151.1| isoleucine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|430564940|gb|ELB04115.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1590]
          Length = 932

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/469 (44%), Positives = 295/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W+++Q++ +    N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENQIYQKRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q   FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLKKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +        G+L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++ + G  K+ + K  AG ++E     HP  +R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQTEIGWEKVTVLKEFAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVDWVIP 433



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|239826541|ref|YP_002949165.1| isoleucyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511504|sp|C5D8P2.1|SYI_GEOSW RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|239806834|gb|ACS23899.1| isoleucyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 923

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/467 (44%), Positives = 287/467 (61%), Gaps = 39/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +P+T F MR N   REPEI K W++  ++ +V ++  G   FVLHDGPPYANG+
Sbjct: 3   YKETLLMPQTEFPMRGNLPKREPEIQKKWEEMDIYRKVQERTKGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKDII RYK +  Y   YVPGWD HGLPIE  + +   +  +K ++ ++ 
Sbjct: 63  IHMGHALNKILKDIIVRYKSMSGYCAPYVPGWDTHGLPIETALTKKGVD--RKSMSVAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   +  Q   FKR GV  DW NPY+TL PEYEA QI+VFG+M+ +G IY+G 
Sbjct: 121 RKLCEQYAYEQINNQREQFKRLGVRGDWENPYITLKPEYEAQQIKVFGEMAKKGLIYKGL 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L+    D  + +WTT
Sbjct: 181 KPVYWSPSSESALAEAEIEYKDKR-SPSIYVAFPVKDG----KGVLD---GDEKIVIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+AV+  L Y VVE                               +VA+ L
Sbjct: 233 TPWTIPANLAIAVHPDLDYQVVETNG-------------------------AKYVVAAAL 267

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + ++  + G  ++ + KT+ G DLE     HP  +R   +VI G+++TT++GTG VHTAP
Sbjct: 268 LESVAKEIGWDEVTVVKTIKGKDLEYVVAKHPFYDRDS-LVICGEHVTTDAGTGCVHTAP 326

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD+ G  T EA  F GL    + N A+ + L+E  +L+  
Sbjct: 327 GHGEDDFIVGQKYGLDVLCPVDERGYMTSEAPGFEGL-FYDEANKAITQKLEEVGALLKL 385

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H YP+DWRTKKPTIFRAT QWFAS++  R   + AI + KW+P
Sbjct: 386 SFITHSYPHDWRTKKPTIFRATTQWFASIDKIRGELLQAIKETKWIP 432



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 114/168 (67%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GAD+LRLWV+SVDY  DV I   +L+Q++++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQLGADILRLWVASVDYQADVRISDSILKQVAEVYRKIRNTFRFMLGNLFDFNP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +++  ++L  +D+Y + +L ++++N++ +YE+Y F  I+  +  F  VDLS FY D A
Sbjct: 663 ETDAVPVNELREVDRYMIVKLNHLIENVKHAYETYDFASIYHDVNNFCTVDLSAFYLDFA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY        RRS QTVL   ++++ +++APILPH AE+VW+++P
Sbjct: 723 KDILYIEAPNDRARRSIQTVLYETVVALTKLVAPILPHTAEEVWEHIP 770


>gi|229086460|ref|ZP_04218632.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696777|gb|EEL49590.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 921

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 213/471 (45%), Positives = 292/471 (61%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I RYK +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V  Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVNRQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++VE+                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVEVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ G+++TT++GTG V
Sbjct: 265 SELFDTVSKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   +YGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFLVGKQYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQAVEETKWVP 432



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 115/175 (65%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+    ++++  +L  +D+Y L +L +++  ++ESYE+Y F  ++  I  F  +DLS
Sbjct: 656 NLADFNPSQDAVAKAELREVDRYMLVKLNDLITKVKESYETYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY     +  RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 716 SFYLDFAKDILYIEAENNHDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 770


>gi|410583555|ref|ZP_11320661.1| Isoleucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|410506375|gb|EKP95884.1| Isoleucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 939

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/467 (44%), Positives = 284/467 (60%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y+ T++LP+T F MRAN   REPEI + WDD  ++ R+     G   FVLHDGPPYANG+
Sbjct: 3   YRETLNLPQTDFPMRANLPQREPEIQRRWDDMDLYRRLRQARRGRPRFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G ALNKILKD++ R+  +  Y   YVPGWD HGLPIE + L+ L  D ++ ++P +L
Sbjct: 63  IHVGTALNKILKDVVVRHASMAGYDAPYVPGWDTHGLPIERRALEVLGVD-RRAISPVEL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +   +A   +  Q   F+R GV  DW  PYLTL+PEYEA QIEVFG+M+ +GYIYR  
Sbjct: 122 RNRCRDYALDQMNRQRQQFRRLGVLGDWERPYLTLEPEYEAKQIEVFGEMARRGYIYRNL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
             V+W P   TALAEAE+EY E   S SIY  F +V       G          L +WTT
Sbjct: 182 YSVYWCPVDETALAEAEIEYRE-KTSPSIYVAFPVVDGRGRLPGGAR-------LVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+AV+ + +Y  VE                           +  ++VA  L
Sbjct: 234 TPWTIPANLAIAVHPEARYVAVET-------------------------GRGLLVVAEPL 268

Query: 405 VPTLEAKWGTKLVIKK-TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  + A  G +   +     G++LE   Y HP+ +R  PVV+  ++++ E GTGLVHTAP
Sbjct: 269 VERVLAAAGLEERGRSGPWTGAELEGVTYRHPLFDRTSPVVLA-EHVSMEEGTGLVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHGQED+    +YGLP+LSPVD  G+FT EAG F+GL    D N  + + L+E  +L+ +
Sbjct: 328 GHGQEDFEVGRRYGLPVLSPVDASGRFTGEAGPFAGL-FYADANPHITRALEEAGALLAQ 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H+Y + WR ++P IFRAT QWFASVEGFR+ A++AI  V+W+P
Sbjct: 387 GTIRHQYAHCWRCRQPVIFRATTQWFASVEGFRRQALEAIDGVRWIP 433



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/160 (44%), Positives = 103/160 (64%), Gaps = 1/160 (0%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGADVLRLW  S DY GDV I   +L+QM+++YRK+R TLR+LL NL D+    +++ Y 
Sbjct: 614 YGADVLRLWAVSSDYRGDVRISEDILKQMAEVYRKIRNTLRFLLANLGDFDPARDAVPYG 673

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  +D++AL +L  + + +R +YE YQ+  ++  +  F + DLS FY DV KDRLY   
Sbjct: 674 ELGELDRWALARLAQVTERVRRAYEEYQYHLVYHAVHNFCVTDLSAFYLDVLKDRLYASL 733

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
                RR+ QTVL      +  ++AP+L H AE+VW +LP
Sbjct: 734 PADPRRRAAQTVLYQLARHLTLLLAPVLCHTAEEVWGHLP 773


>gi|431741881|ref|ZP_19530781.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2039]
 gi|430601034|gb|ELB38656.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2039]
          Length = 932

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/469 (44%), Positives = 295/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W+++Q++ +  + N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENQIYQKRQELNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q   FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLEKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +        G+L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++ + G   + I K  AG ++E     HP  +R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQTEIGWENVTILKEFAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVDWVIP 433



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 108/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y + +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMIVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|237743224|ref|ZP_04573705.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433520|gb|EEO43732.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 712

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/475 (44%), Positives = 292/475 (61%), Gaps = 41/475 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYA 161
           E  Y  T+ LPKT F M+AN   +EP+  K W + +++ +  +KN +GE F+LHDGPPYA
Sbjct: 3   EKEYTSTLHLPKTDFQMKANLPNKEPKYIKKWAEEKIYEKGLEKNKNGETFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGN H+GHALNKILKDII +YK  + YK  YVPGWD HGLPIEL+V++ +     ++++ 
Sbjct: 63  NGNTHIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQVVKEVGVSKAREMSA 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            ++R    K+A+  V  Q   F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI+
Sbjct: 123 LEIRKLCEKYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIF 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGL 339
           +G KPV+WSP++ TALAEAE+EY + H S SIY   RM     +   LL++  F  D  +
Sbjct: 183 KGLKPVYWSPATETALAEAEIEYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAYV 235

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN A+ +NA   Y +                 K+  GN         +I
Sbjct: 236 LIWTTTPWTLPANVAICLNANFDYGLY----------------KTEKGN---------LI 270

Query: 400 VASDLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A DL  +     G K   + K   G DLE   Y HP   R   ++I GD++T ++GTG 
Sbjct: 271 LAKDLAESAFKDIGIKNFELIKEFKGKDLEYTTYKHPFLER-TGLIILGDHVTADAGTGA 329

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQ 517
           VHTAPGHGQEDYV  L Y LP++SP+D  G  TEEAG  F GL V  + N A+++YL + 
Sbjct: 330 VHTAPGHGQEDYVVGLAYKLPVISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIEYLTKT 388

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
             ++  +   H YP+DWR+K P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 389 GHILKMQEITHSYPHDWRSKTPVIFRATEQWFIRMEGGDLRERTLKVIDKINFIP 443



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 63/89 (70%), Gaps = 1/89 (1%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +L+QMS+ YR++R T RY+LGN +D+    + + Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNILKQMSEAYRRIRNTARYILGNSYDFNPKTDKVPYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQF 664
           D+  ID++AL +LE + +++ ESY+ Y+F
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEF 712


>gi|433654816|ref|YP_007298524.1| Isoleucyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum M0795]
 gi|433293005|gb|AGB18827.1| Isoleucyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum M0795]
          Length = 927

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/468 (45%), Positives = 298/468 (63%), Gaps = 34/468 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y  T++LPKT F M+AN   REPEI K W+D  ++ +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YNKTLNLPKTDFPMKANLPTREPEILKKWEDMDIYHKSLNKNKGKEKFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A+NK+LKD+I +YK ++ +   YVPGWD HGLPIE + +++L    + ++ P + 
Sbjct: 63  IHLGTAMNKVLKDMIVKYKTMRGFDAPYVPGWDTHGLPIEQQAIKTLGI-KRNEVGPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     FA + ++ Q + F R GV  DW NPYLTL  EYEA QIEVFG+M+ +GYIY+G 
Sbjct: 122 RKVCRDFAFSQIEKQKSQFIRLGVRGDWKNPYLTLKHEYEAKQIEVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W     TALAEAE+EY +   S SIY  FR+        G++++ L DL   +WTT
Sbjct: 182 KPVYWCTDCETALAEAEIEYSD-ETSDSIYVKFRVTDDLGKFKGIVDD-LNDLYFVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           T WT+PAN A+ +N +  YA+                  S+ G       K   I+A D+
Sbjct: 240 TTWTIPANLAICLNPEFDYAL------------------SKYG-------KEIYIMAKDM 274

Query: 405 VPTLEAKWG--TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           +  +E + G   + VI  T  G DLE  R  HP+ +R   ++I GD++T E+GTG VHTA
Sbjct: 275 LDNIERETGLENREVI-ATFKGKDLEGMRAKHPLFDRS-SLIILGDHVTLEAGTGCVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG+ED++   KYGL +L+PVDD+G+FTE+AGK+ GL    D N  + + L++  +L+ 
Sbjct: 333 PGHGEEDFIVGQKYGLDVLNPVDDKGRFTEKAGKYKGL-FYADANKVIKEDLEKVNALLA 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +   H YP+ WR K P IFRATEQWFASV+GFR  A++AI +V W+P
Sbjct: 392 SKTLTHSYPHCWRCKNPVIFRATEQWFASVDGFRDEALNAIRKVNWIP 439



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 125/210 (59%), Gaps = 7/210 (3%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P      YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+   
Sbjct: 611 PADVVKEYGADILRLWAVSADFTSDMRISKEILKQMTESYRKIRNTAKFLLSNLYDFDAD 670

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            +++ Y++L  ID++AL++   +VK++  +++ Y+F++   ++  F IVD+SN Y D+ K
Sbjct: 671 KDALPYEELLNIDKWALYKYNQLVKDVTTAFDKYKFYEFLHLVHTFCIVDMSNLYLDILK 730

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 748
           DRLYT    S  RR+ QT L   L   VR+IAP+L   A+++W  +      +  +  E 
Sbjct: 731 DRLYTFPAASKERRAAQTTLYTILDGFVRIIAPVLTFTADEIWSFMKH----DANNNYES 786

Query: 749 VFESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           V  + WP  ++ +    + E   W K+ ++
Sbjct: 787 VQLADWPQPNDAYDNKEIVEK--WNKLFDI 814


>gi|340749643|ref|ZP_08686496.1| isoleucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421475|gb|EEO36522.1| isoleucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 933

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 220/535 (41%), Positives = 317/535 (59%), Gaps = 53/535 (9%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYAN 162
           E  Y  T++LPKT+F M+AN   +EP+I + W++++++ +   K   ++F+LHDGPPYAN
Sbjct: 3   EKDYGATLNLPKTSFQMKANLPNKEPKIIQKWEENKIYEKGLTKGT-KSFILHDGPPYAN 61

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G++H+GHALNKILKDII +YK L+ Y   Y+PGWD HGLPIELKV + L E A K+++P 
Sbjct: 62  GDIHIGHALNKILKDIILKYKRLRGYNAPYIPGWDTHGLPIELKVTEKLGEKA-KEMSPL 120

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           ++R    ++A   V  Q   FKR GV  DW NPYLTL PEYEA Q+EVFG++   GYI++
Sbjct: 121 EIRKLCTEYALKWVGIQREGFKRLGVLGDWENPYLTLKPEYEAKQLEVFGELYENGYIFK 180

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KP++WSP + TALAEAE+EY +   S SIY      +      GL  E      + +W
Sbjct: 181 GLKPIYWSPVTETALAEAEIEY-KNVTSPSIYVKMEANADLLERLGLTEETW----VVIW 235

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+++N   +Y V                 K+  GN         +I+A 
Sbjct: 236 TTTPWTLPANMAISLNPNFEYGVY----------------KTEKGN---------LILAK 270

Query: 403 DLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           DL     A+    +  + K   GSDLE   Y HP   R   +++ G ++T ++GTG VHT
Sbjct: 271 DLAEKAFAEMEIAEYELVKEFIGSDLERATYKHPFLERTGMIIL-GTHVTADAGTGCVHT 329

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQ+DYV   +YG+ ++SP++++G  TEEAG+F+GL  L   N  +V +L E   L+
Sbjct: 330 APGHGQDDYVVGTRYGIEVISPINNKGVLTEEAGQFAGLFYL-KANKEIVAHLTETGHLL 388

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP-------- 571
             +  EH YP+DWR+K P IFRATEQWF   EG   R+ A+ A+  V++VP         
Sbjct: 389 KLKNIEHSYPHDWRSKTPVIFRATEQWFVKAEGSDLRERALKALDNVEFVPAWGRNRIGS 448

Query: 572 --QEAPGYGADVLRLWVSSV-----DYTGDVMIGPQVLRQMSDIYRKLRGTLRYL 619
             +  P +     R+W   +     + TG  +   ++L ++ +I +K  GT  +L
Sbjct: 449 MLETRPDWCISRQRVWGVPIPVFYNEETGKEIYNKEILARIVEIVKK-EGTAAWL 502



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/175 (46%), Positives = 118/175 (67%), Gaps = 1/175 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      YGAD+LRLW +SVDY  DV I   +L+QM++ YR++R T RY+LGN +D+  
Sbjct: 613 VPADVIKVYGADILRLWCASVDYREDVKISDNILKQMAEAYRRVRNTARYILGNSNDFNP 672

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + ++Y DL  ID++AL +LE + + + E+YE Y+F+ +FQ I  F  VD+S FY D+ 
Sbjct: 673 ATDKVAYKDLMEIDKWALNKLEILKRRVTENYEKYEFYNLFQDIHYFAGVDMSAFYLDII 732

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLED 742
           KDRLYT GT S  R+S QTV++  LL++ ++IAPIL   AE++W  LP A   E+
Sbjct: 733 KDRLYTEGTNSLDRKSAQTVMTEILLTLTKMIAPILSFTAEEIWDTLPEALKDEE 787


>gi|237741055|ref|ZP_04571536.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229431099|gb|EEO41311.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 709

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 219/528 (41%), Positives = 311/528 (58%), Gaps = 56/528 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           Y  T+ LPKT F M+AN   +EP+  K W + +++ +  +KN +GE F+LHDGPPYANGN
Sbjct: 6   YTSTLHLPKTDFQMKANLPNKEPKYIKKWTEEKIYEKGLEKNKNGETFILHDGPPYANGN 65

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
            H+GHALNKILKDII +YK  + YK  YVPGWD HGLPIEL+V++ +     ++++  ++
Sbjct: 66  THIGHALNKILKDIIVKYKTFRGYKSPYVPGWDTHGLPIELQVVKEVGVAKAREMSALEI 125

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    K+A+  V  Q   F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI++G 
Sbjct: 126 RKLCEKYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIFKGL 185

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVW 342
           KPV+WSP++ TALAEAE+EY + HVS SIY   RM     +   LL++  F  D  + +W
Sbjct: 186 KPVYWSPATETALAEAEIEYYD-HVSPSIYV--RM----QANKDLLDKIGFNEDAYVLIW 238

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+ +N    Y +                 K+  GN         +I+A 
Sbjct: 239 TTTPWTLPANVAICLNENFDYGLY----------------KTEKGN---------LILAK 273

Query: 403 DLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           DL  +     G +   + K   G DLE   Y HP   R   +VI GD++T ++GTG VHT
Sbjct: 274 DLAESAFKDIGIENFELIKEFKGKDLEYTTYKHPFLER-TGLVILGDHVTADAGTGAVHT 332

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSL 520
           APGHGQ+DYV  L Y LP++SP+D  G  TEEAG  F GL    D N +++K+L E   +
Sbjct: 333 APGHGQDDYVVGLNYKLPVISPIDHRGCLTEEAGDLFKGL-FYSDANKSIIKHLTETGHI 391

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP------- 571
           +  +   H YP+DWR+K P IFRATEQWF  +EG   R+  + AI ++ ++P        
Sbjct: 392 LKMQEINHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKTLKAIDKINFIPSWGKNRIG 451

Query: 572 ---QEAPGYGADVLRLWVSSV-----DYTGDVMIGPQVLRQMSDIYRK 611
              +  P +     R+W   +     D T + +   ++L ++ D+ R+
Sbjct: 452 SMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDRICDLVRE 499



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 61/85 (71%), Gaps = 1/85 (1%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYE 660
           D+  ID++AL +LE + +++ ESY+
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYD 708


>gi|340754220|ref|ZP_08690982.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|422316126|ref|ZP_16397527.1| isoleucyl-tRNA synthetase [Fusobacterium periodonticum D10]
 gi|229423745|gb|EEO38792.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|404591495|gb|EKA93629.1| isoleucyl-tRNA synthetase [Fusobacterium periodonticum D10]
          Length = 933

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 209/475 (44%), Positives = 295/475 (62%), Gaps = 41/475 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYA 161
           E  Y  T+ LPKT F M+AN   +EP+    W + +++ +  +KN +GE+F+LHDGPPYA
Sbjct: 3   EKEYTSTLHLPKTDFQMKANLPNKEPKYITKWTEEKIYEKGLEKNKNGESFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGN H+GHALNKILKDII +YK  + +K  YVPGWD HGLPIEL+V++ +     ++++P
Sbjct: 63  NGNTHIGHALNKILKDIIIKYKTFRGFKSPYVPGWDTHGLPIELQVVKEVGVAKAREMSP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            ++R +  ++A+  V  Q   F R GV  DW++PYLTLDP +EA Q+E+FG++  +GYI+
Sbjct: 123 LEIRKRCEEYARKWVGIQKEQFIRLGVLGDWDHPYLTLDPRFEAKQLELFGEIYEKGYIF 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGL 339
           +G KPV+WSP++ TALAEAE+EY + HVS SIY   RM     +   LL++  F  D  +
Sbjct: 183 KGLKPVYWSPATETALAEAEIEYYD-HVSPSIYV--RM----QANKDLLDKIGFNEDAYV 235

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN A+ +N    Y +                 K+  GN         +I
Sbjct: 236 LIWTTTPWTLPANVAICLNENFDYGLY----------------KTEKGN---------LI 270

Query: 400 VASDLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A DL  +     G +   + K   G DLE   Y HP   R   +VI GD++T ++GTG 
Sbjct: 271 LAKDLAESAFKNIGIENAELLKEFKGKDLEYTTYQHPFLER-TGLVILGDHVTADAGTGA 329

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQ 517
           VHTAPGHGQ+DYV  L Y LP++SP+D  G  TEEAG  F GL V  + N A++K+L E 
Sbjct: 330 VHTAPGHGQDDYVVGLNYKLPVISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIKHLTET 388

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
             ++  +   H YP+DWR+K P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 389 GHILKMQEINHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKTLKVIDEINFIP 443



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/196 (42%), Positives = 126/196 (64%), Gaps = 15/196 (7%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIIKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 754
             S  RR+ QTV+   L+++ +++APIL   AE++W+NLP      +   AE VF + W 
Sbjct: 744 KDSVARRAAQTVMYEILMTLTKMVAPILSFTAEEIWENLP-----AEAREAESVFLADWY 798

Query: 755 --------PVLDEKWR 762
                   P LDEKW+
Sbjct: 799 VNNDEYLNPELDEKWQ 814


>gi|257897130|ref|ZP_05676783.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257833695|gb|EEV60116.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com12]
          Length = 930

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/467 (44%), Positives = 294/467 (62%), Gaps = 39/467 (8%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGNL 165
           K T+ L KT F MR N   RE E  K W+++Q++ +    N+G+ +FVLHDGPPYANGN+
Sbjct: 2   KETLQLGKTKFPMRGNLPNREGEWQKEWEENQIYQKRQKLNEGKPSFVLHDGPPYANGNI 61

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++  
Sbjct: 62  HLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAEYL 119

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            K  ++A + V  Q   FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G K
Sbjct: 120 KKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLK 179

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           P++WSPSS ++LAEAE+EY +   S SI+  F +        G+L+E   D    +WTTT
Sbjct: 180 PIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWTTT 231

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN  +AVN K  Y +VE                        D +K   +VA DL+
Sbjct: 232 PWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKDLL 266

Query: 406 PTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
            T++ + G  K+ + K  AG ++E     HP  +R+  +VI GD++T ++GTGLVHTAPG
Sbjct: 267 ETVQTEIGWEKVTVLKEFAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTAPG 325

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  +
Sbjct: 326 HGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLD 384

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 385 FFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVDWVIP 431



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 602 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 661

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 662 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 721

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 722 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 768


>gi|336392794|ref|ZP_08574193.1| isoleucyl-tRNA synthetase [Lactobacillus coryniformis subsp.
           torquens KCTC 3535]
          Length = 429

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 215/462 (46%), Positives = 285/462 (61%), Gaps = 38/462 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  VRE E  K W+++ ++ +    N+G+  FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFPMRGNLPVREAEWQKAWEENNLYQQRQKLNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPS 222
           N+H+GHALNKI KDII R+K +  ++  YVPGWD HGLPIE ++  Q  D   +K ++ S
Sbjct: 62  NIHIGHALNKISKDIIVRFKSMSGFRAPYVPGWDTHGLPIEQQLTKQGYD---RKKMSIS 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + RA   K+A   V  Q   FKR GV ADW+ PYLTL PE+EA ++ VFG+M+ +GYIYR
Sbjct: 119 EFRALCHKYALEQVDKQRTDFKRLGVSADWDRPYLTLAPEFEAHEVRVFGEMAKKGYIYR 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KP+HWSPSS +ALAEAELEY +     + Y             G+L+    D    VW
Sbjct: 179 GNKPIHWSPSSESALAEAELEYKDIESPSAYYG-----EQVKDGKGILDT---DTYFVVW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PA+  + V A+  Y+VV+           PA +  +             +VAS
Sbjct: 231 TTTPWTIPASEGIVVEAEYDYSVVQ-----------PAGEDRK------------FVVAS 267

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +L+ TL  K G + V + KTL G D+E     HP    +  +V+ GDY+T +SGTGLVHT
Sbjct: 268 ELINTLAEKAGWQDVKVLKTLKGQDMEYMTAQHPFYQERELLVMLGDYVTLDSGTGLVHT 327

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APG G +D+    KYGL ILSPVDD+G+ T+EA  F GL    D N   +K +++   ++
Sbjct: 328 APGLGDDDFKVGKKYGLDILSPVDDQGRLTDEAPGFEGL-FYEDANKLSIKKVEDAGLML 386

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
            +EPY H YP DWRTKKP IFR+T QWFASV+ FR   + AI
Sbjct: 387 KQEPYLHSYPMDWRTKKPVIFRSTPQWFASVDAFRDQILAAI 428


>gi|407977670|ref|ZP_11158507.1| isoleucyl-tRNA ligase [Bacillus sp. HYC-10]
 gi|407415923|gb|EKF37504.1| isoleucyl-tRNA ligase [Bacillus sp. HYC-10]
          Length = 921

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 206/467 (44%), Positives = 291/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   +EPEI + W +  ++  V ++  G   F+LHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGNLPNKEPEIQEKWAEKDIYQMVLERTKGRPTFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I R+K +  +   YVPGWD HGLPIE  + ++  +  +K+++ ++ 
Sbjct: 63  IHMGHALNKILKDFIVRFKSMNGFHAPYVPGWDTHGLPIETALTKN-KKVKRKEMSTAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q   FKR GV ADW+NPY+TL PEYEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEEYAWKQIEGQRNQFKRLGVRADWDNPYVTLKPEYEAQQILVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F++        G+L          +WTT
Sbjct: 182 KPVNWSPSSESALAEAEIEYKDKR-SPSIYVSFKVKDG----KGVLEN---GEQFIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  + V+  L+Y+V+++ +                            +VAS+L
Sbjct: 234 TPWTLPANLGICVHPNLEYSVLQVGTER-------------------------YVVASEL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
              +    G     + KTL G +L+     HP+  R   V++ GD++TT++GTG VHTAP
Sbjct: 269 AEQVAKTLGFDDYEVVKTLKGKELDTIVAEHPIYGRDSLVML-GDHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++  +KYGL +L PVD++G  TEEA  F GL    D N AV + L+ + +L   
Sbjct: 328 GHGEDDFIVGMKYGLEVLCPVDEKGVMTEEAPGFEGL-FYEDANKAVTEQLEAKGALKKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +   H YP+DWRTKKPTI+RAT QWFAS++ FR+A +D I + KWVP
Sbjct: 387 DFITHSYPHDWRTKKPTIYRATAQWFASIKDFREALLDNIKETKWVP 433



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 109/168 (64%), Gaps = 1/168 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 605 PTKVAKQLGAEILRLWVSSVNYQADHPVSDDILKQVAEVYRKIRNTFRFLHGNLFDFDPA 664

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            N++  ++L  +DQY L +L  ++  ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 665 VNAVPVEELREVDQYILIKLNKLINKVKKAYDDYEFSVVYHAIHNFCTIELSSFYLDFAK 724

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           D +Y        RRS QTV    L+++V++ APILPH A+++W +L F
Sbjct: 725 DVVYIEHANHPDRRSMQTVFYETLMALVKLTAPILPHTADELWSHLSF 772


>gi|293571723|ref|ZP_06682742.1| isoleucyl-tRNA synthetase [Enterococcus faecium E980]
 gi|430840728|ref|ZP_19458651.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1007]
 gi|431066289|ref|ZP_19493912.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1604]
 gi|431099333|ref|ZP_19496499.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1613]
 gi|431594954|ref|ZP_19522060.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1861]
 gi|431738280|ref|ZP_19527225.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1972]
 gi|291608180|gb|EFF37483.1| isoleucyl-tRNA synthetase [Enterococcus faecium E980]
 gi|430494934|gb|ELA71152.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1007]
 gi|430568328|gb|ELB07376.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1604]
 gi|430570834|gb|ELB09773.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1613]
 gi|430590880|gb|ELB28926.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1861]
 gi|430597718|gb|ELB35501.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1972]
          Length = 932

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 209/469 (44%), Positives = 295/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W+++Q++ +  + N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENQIYQKRQELNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q   FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLEKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +        G+L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++ + G   + + K  AG ++E     HP  +R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQTEIGWENVTVLKEFAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVDWVIP 433



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|323702140|ref|ZP_08113807.1| isoleucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532827|gb|EGB22699.1| isoleucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 930

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 206/467 (44%), Positives = 293/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  T++LP+T F MR N   REPEI K W +  ++ +V +KN G+  ++LHDGPPYANG+
Sbjct: 3   YGKTLNLPQTDFPMRGNLPQREPEILKKWAEIDLYHKVQEKNQGKPKYILHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH LNK+LKD++ +Y+ +  Y   YVPGWD HGLPIE + ++SL  + +  ++P + 
Sbjct: 63  IHLGHTLNKVLKDMVVKYRSMSGYDAPYVPGWDTHGLPIEQQAIKSLGIN-RHQVSPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A    K Q   F+R GV  DW++PY TL P+YEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RHKCKEYALNFAKIQSEEFQRLGVRGDWDHPYYTLIPQYEATQIRVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W  S  TALAEAE+EY +   S SIY  F +        G+L +   D  + +WTT
Sbjct: 182 KPVYWCASCETALAEAEVEYAD-KTSPSIYVKFPVKDG----KGVLPQ---DASVVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A++V+ +  Y V    +++ G+                      ++VA +L
Sbjct: 234 TPWTLPANVAISVHPEFAYVV----AMVNGEK---------------------VVVAREL 268

Query: 405 VPTLEAKWGT-KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + + +   G     I   L G  LE     HP  +R+  +VI GD++T ++GTG VHTAP
Sbjct: 269 LESFKQAVGADNAEILAALKGEQLERVTCRHPFVDRES-LVILGDHVTLDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED+    KY LP+L+P+D++G+FT E GKF+G  +L D N  +V+ L E+ +L+  
Sbjct: 328 GHGEEDFEVGKKYNLPVLAPLDNKGRFTAEGGKFAGQFIL-DANKTIVEELKERGALMAH 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              +H+YP+ WR K P  FRATEQWFASVEGFRQ A+ AI  VKWVP
Sbjct: 387 GHIKHQYPHCWRCKNPIFFRATEQWFASVEGFRQEALKAIRNVKWVP 433



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 109/159 (68%), Gaps = 1/159 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSS DY GD+ +   +L+QM++ YRK+R T R+LLGNL+D+    + + Y D
Sbjct: 618 GADILRLWVSSADYRGDLSVSQNILKQMTESYRKIRNTARFLLGNLYDFDPAKDKVDYAD 677

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           LP +D+ AL +L  ++K +  +YE+Y+F  ++  I  F ++D+S FY D+ KDRLYT   
Sbjct: 678 LPELDRVALMELHKLIKRVLAAYENYEFHVVYHAIHNFCVLDMSAFYLDIIKDRLYTAPP 737

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
            S  RR+ QTVL   L ++VR++ P+L    E+++Q++P
Sbjct: 738 ASRERRAAQTVLYEVLDALVRLLVPVLAFTTEEIYQHMP 776


>gi|228935211|ref|ZP_04098037.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228824376|gb|EEM70182.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 913

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 213/464 (45%), Positives = 290/464 (62%), Gaps = 45/464 (9%)

Query: 112 LPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGNLHMGHA 170
           +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG++HMGHA
Sbjct: 1   MPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHA 60

Query: 171 LNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPSKLRAKA 228
           LNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T ++ R   
Sbjct: 61  LNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTVAEFRKLC 116

Query: 229 AKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVH 288
           A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+
Sbjct: 117 AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVY 176

Query: 289 WSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWT 348
           WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +WTTTPWT
Sbjct: 177 WSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWT 228

Query: 349 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 408
           +PAN  ++V+ +L+YA+V++                       D+K    I+AS+L  T+
Sbjct: 229 LPANLGISVHPELEYAIVKVN----------------------DEK---YIIASELFETV 263

Query: 409 EA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHG 466
               +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG
Sbjct: 264 AKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHG 321

Query: 467 QEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPY 526
           ++D+V   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +L+     
Sbjct: 322 EDDFVVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFI 380

Query: 527 EHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 381 THSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 424



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 589 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 647

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 648 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 707

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 708 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 762


>gi|229092941|ref|ZP_04224074.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228690445|gb|EEL44229.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 913

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/464 (45%), Positives = 290/464 (62%), Gaps = 45/464 (9%)

Query: 112 LPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGNLHMGHA 170
           +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG++HMGHA
Sbjct: 1   MPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHA 60

Query: 171 LNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPSKLRAKA 228
           LNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T ++ R   
Sbjct: 61  LNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTVAEFRKLC 116

Query: 229 AKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVH 288
           A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+
Sbjct: 117 AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVY 176

Query: 289 WSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWT 348
           WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +WTTTPWT
Sbjct: 177 WSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWT 228

Query: 349 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 408
           +PAN  ++V+ +L+YA+V++                       D+K    I+AS+L  T+
Sbjct: 229 LPANLGISVHPELEYAIVKVN----------------------DEK---YIIASELFETV 263

Query: 409 EA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHG 466
               +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG
Sbjct: 264 AKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHG 321

Query: 467 QEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPY 526
           ++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +L+     
Sbjct: 322 EDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFI 380

Query: 527 EHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 381 THSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 424



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 589 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 647

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 648 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 707

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 708 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 762


>gi|384549949|ref|YP_005739201.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302332798|gb|ADL22991.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 917

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 208/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    I                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNING----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +S+   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSVPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|228916533|ref|ZP_04080099.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228843112|gb|EEM88194.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 913

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/464 (45%), Positives = 290/464 (62%), Gaps = 45/464 (9%)

Query: 112 LPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGNLHMGHA 170
           +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG++HMGHA
Sbjct: 1   MPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHA 60

Query: 171 LNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPSKLRAKA 228
           LNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T ++ R   
Sbjct: 61  LNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTVAEFRKLC 116

Query: 229 AKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVH 288
           A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+
Sbjct: 117 AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVY 176

Query: 289 WSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWT 348
           WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +WTTTPWT
Sbjct: 177 WSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWT 228

Query: 349 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 408
           +PAN  ++V+ +L+YA+V++                       D+K    I+AS+L  T+
Sbjct: 229 LPANLGISVHPELEYAIVKVN----------------------DEK---YIIASELFETV 263

Query: 409 EA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHG 466
               +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG
Sbjct: 264 AKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHG 321

Query: 467 QEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPY 526
           ++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +L+     
Sbjct: 322 EDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFI 380

Query: 527 EHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 381 THSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 424



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 589 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 647

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 648 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 707

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 708 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 762


>gi|297591363|ref|ZP_06950001.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|384867925|ref|YP_005748121.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|297576249|gb|EFH94965.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312438430|gb|ADQ77501.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 920

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 6   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 65

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 66  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 124 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 184 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFNV----KDDKGVVD---ADAKFIIWTT 235

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 236 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 273

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 274 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 332

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 333 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 391

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 392 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 430



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 608 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 667

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 668 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 727

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 728 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 786

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 787 MPKVVEVDQALLD-KWRTF 804


>gi|196247714|ref|ZP_03146416.1| isoleucyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196212498|gb|EDY07255.1| isoleucyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 542

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/469 (45%), Positives = 290/469 (61%), Gaps = 43/469 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +P+T F MR N   REPE+ K W++  ++ +V ++  G   FVLHDGPPYANG+
Sbjct: 3   YKETLLMPQTEFPMRGNLPKREPEMQKKWEEMDIYRKVQERTKGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPSK 223
           +HMGHALNKILKDII RYK +  +   YVPGWD HGLPIE  +  Q +D   +K ++ ++
Sbjct: 63  IHMGHALNKILKDIIVRYKSMSGFCAPYVPGWDTHGLPIETALTKQGVD---RKSMSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   +  Q   FKR GV  DW+NPY+TL PEYEA QI+VFG+M+ +G IY+G
Sbjct: 120 FRKLCEQYAYEQIDNQRQQFKRLGVRGDWDNPYITLKPEYEAQQIKVFGEMAKKGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G       D  + +WT
Sbjct: 180 LKPVYWSPSSESALAEAEIEYKDKR-SPSIYVAFPVKDGKGVLQG-------DERIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+AV+  L Y +VE            AN +               +VA+ 
Sbjct: 232 TTPWTIPANLAIAVHPDLDYYIVE------------ANGQK-------------YVVAAA 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L  ++  E  W    V+ KT+ G +LE     HP   R   +V+ G+++TT++GTG VHT
Sbjct: 267 LAESVAKEVGWEAWSVV-KTVKGKELEYVVAKHPFYERDS-LVVCGEHVTTDAGTGCVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++D++   KYGLP+L PVD+ G  TEEA  F+G+    + N A+ + L+E  +L+
Sbjct: 325 APGHGEDDFIVGQKYGLPVLCPVDERGYMTEEAPGFAGM-FYDEANKAITQKLEEVGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                 H YP+DWRTK+PTIFRAT QWFAS++  R   +DAI + KWVP
Sbjct: 384 KLSFITHSYPHDWRTKQPTIFRATTQWFASIDKIRDQLLDAIKETKWVP 432


>gi|283770255|ref|ZP_06343147.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283460402|gb|EFC07492.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 917

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATSQWFASISKVRQDILDAI 427



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|423367940|ref|ZP_17345372.1| isoleucyl-tRNA synthetase [Bacillus cereus VD142]
 gi|401082801|gb|EJP91066.1| isoleucyl-tRNA synthetase [Bacillus cereus VD142]
          Length = 921

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/471 (45%), Positives = 293/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I R+K +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+YA+V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYAIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ G+++TT++GTG V
Sbjct: 265 SELFETVAKTLEWENTEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFLVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQAVEETKWVP 432



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 116/177 (65%), Gaps = 2/177 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+    N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFNPSENTVAAAELREVDRYMLVKLNDLITKVKEAYEAYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P A
Sbjct: 716 SFYLDFAKDILYIEGANHHDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGA 772


>gi|49483356|ref|YP_040580.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257427907|ref|ZP_05604305.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430540|ref|ZP_05606922.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433301|ref|ZP_05609659.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436143|ref|ZP_05612190.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903745|ref|ZP_06311633.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282905509|ref|ZP_06313364.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282910766|ref|ZP_06318569.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913969|ref|ZP_06321756.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282918891|ref|ZP_06326626.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282924014|ref|ZP_06331690.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957935|ref|ZP_06375386.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293501002|ref|ZP_06666853.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509960|ref|ZP_06668669.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|293526549|ref|ZP_06671234.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427679|ref|ZP_06820311.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|415683781|ref|ZP_11448983.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|417888864|ref|ZP_12532966.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21195]
 gi|418565192|ref|ZP_13129606.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21264]
 gi|418582027|ref|ZP_13146105.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1605]
 gi|418595545|ref|ZP_13159152.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21342]
 gi|418601278|ref|ZP_13164716.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21345]
 gi|418891825|ref|ZP_13445940.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1176]
 gi|418897730|ref|ZP_13451800.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC341D]
 gi|418908904|ref|ZP_13462907.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG149]
 gi|418922775|ref|ZP_13476692.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1233]
 gi|418985773|ref|ZP_13533459.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1500]
 gi|1174521|sp|P41972.1|SYI1_STAAU RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|81651290|sp|Q6GHP2.1|SYI_STAAR RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|437916|emb|CAA52296.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|49241485|emb|CAG40171.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257274748|gb|EEV06235.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278668|gb|EEV09287.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281394|gb|EEV11531.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284425|gb|EEV14545.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282313986|gb|EFB44378.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316701|gb|EFB47075.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322037|gb|EFB52361.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325371|gb|EFB55680.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282330801|gb|EFB60315.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595363|gb|EFC00327.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790084|gb|EFC28901.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920621|gb|EFD97684.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096007|gb|EFE26268.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467410|gb|EFF09927.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|295128037|gb|EFG57671.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|315194079|gb|EFU24472.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|341853984|gb|EGS94860.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21195]
 gi|371974673|gb|EHO91992.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21264]
 gi|374399105|gb|EHQ70253.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21345]
 gi|374401125|gb|EHQ72212.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21342]
 gi|377705591|gb|EHT29895.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1500]
 gi|377710437|gb|EHT34675.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1605]
 gi|377731157|gb|EHT55214.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1176]
 gi|377736098|gb|EHT60128.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1233]
 gi|377753942|gb|EHT77852.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG149]
 gi|377760765|gb|EHT84641.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC341D]
          Length = 917

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFNV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|228987040|ref|ZP_04147165.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229157474|ref|ZP_04285551.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228625924|gb|EEK82674.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228772634|gb|EEM21075.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 913

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 211/464 (45%), Positives = 290/464 (62%), Gaps = 45/464 (9%)

Query: 112 LPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGNLHMGHA 170
           +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG++HMGHA
Sbjct: 1   MPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHA 60

Query: 171 LNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPSKLRAKA 228
           LNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T ++ R   
Sbjct: 61  LNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTVAEFRKLC 116

Query: 229 AKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVH 288
           A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+
Sbjct: 117 AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVY 176

Query: 289 WSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWT 348
           WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +WTTTPWT
Sbjct: 177 WSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWT 228

Query: 349 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 408
           +PAN  ++V+ +L+Y++V++                       D+K    I+AS+L  T+
Sbjct: 229 LPANLGISVHPELEYSIVKVN----------------------DEK---YIIASELFETV 263

Query: 409 EA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHG 466
               +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG
Sbjct: 264 AKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHG 321

Query: 467 QEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPY 526
           ++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +L+     
Sbjct: 322 EDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFI 380

Query: 527 EHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 381 THSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 424



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 589 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 647

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 648 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 707

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 708 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 762


>gi|257899128|ref|ZP_05678781.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837040|gb|EEV62114.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 930

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/467 (44%), Positives = 294/467 (62%), Gaps = 39/467 (8%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGNL 165
           K T+ L KT F MR N   RE E  K W+++Q++ +  + N+G+ +FVLHDGPPYANGN+
Sbjct: 2   KETLQLGKTKFPMRGNLPNREGEWQKEWEENQIYQKRQELNEGKPSFVLHDGPPYANGNI 61

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++  
Sbjct: 62  HLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAEYL 119

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            K  ++A + V  Q   FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G K
Sbjct: 120 EKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLK 179

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           P++WSPSS ++LAEAE+EY +   S SI+  F +        G+L+E   D    +WTTT
Sbjct: 180 PIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWTTT 231

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN  +AVN K  Y +VE                        D +K   +VA DL+
Sbjct: 232 PWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKDLL 266

Query: 406 PTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
            T++ + G   + + K  AG ++E     HP  +R+  +VI GD++T ++GTGLVHTAPG
Sbjct: 267 ETVQTEIGWENVTVLKEFAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTAPG 325

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  +
Sbjct: 326 HGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLD 384

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 385 FFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVDWVIP 431



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 602 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 661

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 662 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 721

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 722 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 768


>gi|452974554|gb|EME74374.1| isoleucyl-tRNA ligase [Bacillus sonorensis L12]
          Length = 920

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/467 (44%), Positives = 291/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REP+I + W+D  ++  V  + +G   FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGNLPKREPDIQEKWEDMDIYRLVQQRTEGRPMFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNK+LKD I R + +  Y   YVPGWD HGLPIE  + ++  +  +K++T ++ 
Sbjct: 63  IHMGHALNKVLKDFIVRSRSMSGYHAPYVPGWDTHGLPIETALTKN-KKVKRKEMTVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q A FKR GV  DW NPY+TL PE+EA QI+VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEEYAWQQIEGQKAQFKRLGVRGDWENPYVTLKPEFEAQQIKVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L        + +WTT
Sbjct: 182 KPVYWSPSSESALAEAEIEYQDKR-SPSIYVAFDVKDG----KGVLTN---GEKIVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  +AV+  L+Y+VV      EG S                      ++AS L
Sbjct: 234 TPWTIPANLGIAVHPDLEYSVV-----AEGGSR--------------------YVIASAL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V ++    G     + +T+ G DLE+   VHP+  R   V++ G+++TT++GTG VHTAP
Sbjct: 269 VESVAKAVGFENPEVVQTVKGKDLEHIVAVHPLYGRDSLVML-GEHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD++G  T EA  F GL      N  + + L+E  +L+  
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGNMTSEAPGFEGL-FYDQANKPITEKLEENGALLKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +   H YP+DWRTKKPTIFRAT QWFAS++ FR   ++A+ + KWVP
Sbjct: 387 DFITHSYPHDWRTKKPTIFRATAQWFASIKDFRNELLEAVKETKWVP 433



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 111/169 (65%), Gaps = 1/169 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +    +GAD+LRLWV+SVDY  DV +   +L+Q++++YRK+R T R+L GN+ D+  
Sbjct: 604 VPAKIMNQFGADILRLWVASVDYQADVRVSDAILKQVAEVYRKIRNTFRFLHGNIADFDP 663

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++ +DL  +DQY L +L N+++ ++++YE Y F  I+  +  F  ++LS FY D A
Sbjct: 664 AKDAVAVEDLREVDQYMLIKLNNVIEKVKKAYEEYDFAVIYHTVHNFCAIELSAFYMDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           KD +Y        RRS QTV    L+++V+++APIL H A+++W +  F
Sbjct: 724 KDVVYIEHADHKDRRSMQTVFYETLVALVKLVAPILAHTADEMWSHFTF 772


>gi|398813826|ref|ZP_10572517.1| isoleucyl-tRNA synthetase [Brevibacillus sp. BC25]
 gi|398037879|gb|EJL31056.1| isoleucyl-tRNA synthetase [Brevibacillus sp. BC25]
          Length = 925

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 291/469 (62%), Gaps = 42/469 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           Y  T+ LPKT F MR N   REP++   W++  ++ +V D+  D  +FVLHDGPPYANG+
Sbjct: 3   YSKTLALPKTDFPMRGNLPSREPQMQAAWEEQNIYQQVLDRTKDRPSFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL--QSLDEDAKKDLTPS 222
           +H+GHALNKILKD I RYK +  +   Y+PGWD HGLPIE  ++  Q LD   ++ +  +
Sbjct: 63  IHIGHALNKILKDFIVRYKSMAGFYAPYIPGWDTHGLPIEQAIINAQGLD---RRSIEVN 119

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
             R +  ++A + +  Q   FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+
Sbjct: 120 DFRQRCEEYAWSYIDKQRDQFKRLGVRGDWENPYVTLLPEYEANQIRVFGEMAKKGYIYK 179

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G + V+WSPSS TALA+AE+EY +   S SIY  F++        G L+    + G+ +W
Sbjct: 180 GLRCVYWSPSSETALADAEIEYKDKR-SPSIYVSFQVADG----KGKLD---TETGVVIW 231

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A++++ +L+Y VV++                       D +K   +VA+
Sbjct: 232 TTTPWTLPANLAISLHPELEYNVVKV-----------------------DGRK--FLVAN 266

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            L+     + G + V I  T  G DLE     HP  +R+ P+++ G+++T ++GTG VHT
Sbjct: 267 GLIEAASKEIGWEGVEILATFKGQDLEGVETQHPFYDRKSPLIL-GEHVTLDAGTGCVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++D+    KY L +L PVD EGK T EA  F GL    D N  + + L E  +L+
Sbjct: 326 APGHGEDDFNVGQKYNLGVLCPVDHEGKMTNEAPGFEGL-FYEDANKVITEKLKENGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               + H YP+DWRTKKP I+RATEQWFAS++GFR   ++AI  VKW+P
Sbjct: 385 KLSFFTHSYPHDWRTKKPVIYRATEQWFASIDGFRAQMLEAIKNVKWIP 433



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 111/168 (66%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP Q     GAD+LRLWV+SVDY  DV I   +L Q++++YRK+R T R+LLGNL  +  
Sbjct: 604 VPQQVIDKMGADILRLWVASVDYQADVRISDAILNQIAEVYRKIRNTFRFLLGNLDGFNP 663

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + ++Y++L  +D+Y L +   + K  R++Y+ YQF  +F  +  F ++DLS FY D+ 
Sbjct: 664 ATDRVAYEELGELDRYVLAKAAKVAKRTRKAYDEYQFHTVFHAVHNFCVIDLSAFYLDIC 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KDRLY     S  RR+ QTV+   LLS+V+++AP+LPH A++VW  +P
Sbjct: 724 KDRLYVEAPDSLKRRAAQTVMYDCLLSLVKLVAPLLPHTADEVWAFIP 771


>gi|254302496|ref|ZP_04969854.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322688|gb|EDK87938.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 933

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/475 (44%), Positives = 292/475 (61%), Gaps = 41/475 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYA 161
           E  Y  T+ LPKT F M+AN   +EP+  K W + +++ +  +KN +GE F+LHDGPPYA
Sbjct: 3   EKEYTSTLHLPKTDFQMKANLPTKEPKYIKKWTEEKIYEKGLEKNKNGETFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGN H+GHALNKILKDII +YK  + +K  YVPGWD HGLPIEL+V++ +     ++++ 
Sbjct: 63  NGNTHIGHALNKILKDIIVKYKTFRGFKSPYVPGWDTHGLPIELQVVKEVGVAKAREMSA 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            ++R    K+A+  V  Q   F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI+
Sbjct: 123 LEIRKLCEKYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIF 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGL 339
           +G KPV+WSP++ TALAEAE+EY + HVS SIY   RM     +   LL++  F  D  +
Sbjct: 183 KGLKPVYWSPATETALAEAEIEYYD-HVSPSIYV--RM----QANKDLLDKIGFNEDAYV 235

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN A+ +N    Y +                 K+  GN         +I
Sbjct: 236 LIWTTTPWTLPANVAICLNENFDYGLY----------------KTEKGN---------LI 270

Query: 400 VASDLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A DL  +     G +   + K   G DLE   Y HP   R   +VI G+++T ++GTG 
Sbjct: 271 LAKDLAESAFKDIGIENAELIKEFKGKDLEYTTYKHPFLER-TGLVILGNHVTADAGTGA 329

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQ 517
           VHTAPGHGQ+DYV  L Y LP++SP+D  G  TEEAG  F GL V  + N A++K+L E 
Sbjct: 330 VHTAPGHGQDDYVVGLNYKLPVISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIKHLTET 388

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
             ++  +   H YP+DWR+K P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 389 GHILKMQEINHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKTLKVIDKINFIP 443



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 84/196 (42%), Positives = 128/196 (65%), Gaps = 15/196 (7%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 754
             S  RR+ QTV+   L+++ +++APIL   AE++W+++P A T E    AE +F + W 
Sbjct: 744 KDSIARRAAQTVMYEVLMTLTKMVAPILSFTAEEIWESIP-AETRE----AESIFLADWY 798

Query: 755 --------PVLDEKWR 762
                   P LDEKW+
Sbjct: 799 VNNDEYLKPELDEKWQ 814


>gi|291460835|ref|ZP_06600216.1| isoleucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380425|gb|EFE87943.1| isoleucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 544

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/475 (44%), Positives = 297/475 (62%), Gaps = 41/475 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYA 161
           E  Y  T+ LPKT F M+AN   +EP+  + W++ +++ +  +KN +GE+F+LHDGPPYA
Sbjct: 3   EKEYTSTLHLPKTDFQMKANLPNKEPKYIEKWNEEKIYEKGLEKNKNGESFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGN H+GHALNKILKDII +YK  + +K  YVPGWD HGLPIEL+V++ +     ++++P
Sbjct: 63  NGNTHIGHALNKILKDIIVKYKTFRGFKSPYVPGWDTHGLPIELQVVKEVGLAKAREMSP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            ++R +  ++A+  V  Q   F R GV  DW+NPYLTLDP +EA Q+E+FG++  +GYI+
Sbjct: 123 LEIRKRCEEYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYEKGYIF 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGL 339
           +G KPV+WSP++ TALAEAE+EY + H S SIY   RM     +   LL++  F  D  +
Sbjct: 183 KGLKPVYWSPATETALAEAEIEYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAFV 235

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN A+ +N    Y +                 K+  GN         +I
Sbjct: 236 LIWTTTPWTLPANVAICLNENFDYGLY----------------KTEKGN---------LI 270

Query: 400 VASDLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A DL  +     G +   + K   G +LE   Y HP   R   +VI GD++T ++GTG 
Sbjct: 271 LAKDLAESAFKDIGIENAELLKEFKGKELEYTTYQHPFLER-TGLVILGDHVTADAGTGA 329

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQ 517
           VHTAPGHGQ+DYV  L Y LP++SP+D  G  TEEAG+ F GL V  + N A++KYL E 
Sbjct: 330 VHTAPGHGQDDYVVGLSYKLPVVSPIDHRGCLTEEAGELFKGL-VYSEANKAIIKYLTET 388

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
             ++  +   H YP+DWR+K P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 389 GHILKMQEINHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKTLKVIDEINFIP 443


>gi|21282805|ref|NP_645893.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49486033|ref|YP_043254.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|418934092|ref|ZP_13487916.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC128]
 gi|448740327|ref|ZP_21722307.1| isoleucine--tRNA ligase [Staphylococcus aureus KT/314250]
 gi|39932218|sp|Q8NX29.1|SYI_STAAW RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|81649443|sp|Q6GA19.1|SYI_STAAS RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|21204243|dbj|BAB94941.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49244476|emb|CAG42904.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|377771872|gb|EHT95626.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC128]
 gi|445548972|gb|ELY17218.1| isoleucine--tRNA ligase [Staphylococcus aureus KT/314250]
          Length = 917

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVDG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 121/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI+  +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSITESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|386830730|ref|YP_006237384.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus HO
           5096 0412]
 gi|417797869|ref|ZP_12445055.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21310]
 gi|418655149|ref|ZP_13217026.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-105]
 gi|334276991|gb|EGL95230.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21310]
 gi|375037998|gb|EHS30998.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-105]
 gi|385196122|emb|CCG15741.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus HO
           5096 0412]
          Length = 917

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  ++NNPY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGNFNNPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|430833719|ref|ZP_19451730.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0679]
 gi|430486124|gb|ELA62992.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0679]
          Length = 932

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/469 (44%), Positives = 296/469 (63%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++++++ +  + N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENRIYQKRQELNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +         +L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++++ G   + + K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +VKWV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVKWVIP 433



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|15924183|ref|NP_371717.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926776|ref|NP_374309.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|57651763|ref|YP_186069.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87161418|ref|YP_493784.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194899|ref|YP_499699.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148267685|ref|YP_001246628.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393743|ref|YP_001316418.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221315|ref|YP_001332137.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156979514|ref|YP_001441773.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|161509367|ref|YP_001575026.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253314953|ref|ZP_04838166.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253731812|ref|ZP_04865977.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|255005980|ref|ZP_05144581.2| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257795751|ref|ZP_05644730.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258415975|ref|ZP_05682245.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258419722|ref|ZP_05682689.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438764|ref|ZP_05689917.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258444530|ref|ZP_05692859.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258447637|ref|ZP_05695781.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258449479|ref|ZP_05697582.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258451891|ref|ZP_05699912.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258454858|ref|ZP_05702822.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262048766|ref|ZP_06021648.1| Ile-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051692|ref|ZP_06023911.1| Ile-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269202808|ref|YP_003282077.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282892679|ref|ZP_06300914.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282919974|ref|ZP_06327703.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282929238|ref|ZP_06336813.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|284024117|ref|ZP_06378515.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|295407131|ref|ZP_06816932.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296276131|ref|ZP_06858638.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297245983|ref|ZP_06929842.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|379014384|ref|YP_005290620.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VC40]
 gi|384869726|ref|YP_005752440.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|387150336|ref|YP_005741900.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|415688519|ref|ZP_11452209.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|415691040|ref|ZP_11453279.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|417650020|ref|ZP_12299800.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
 gi|417651355|ref|ZP_12301118.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|417800988|ref|ZP_12448090.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21318]
 gi|417893442|ref|ZP_12537471.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21201]
 gi|417898891|ref|ZP_12542804.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21259]
 gi|417901503|ref|ZP_12545379.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21266]
 gi|418286458|ref|ZP_12899104.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21209]
 gi|418312757|ref|ZP_12924266.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21334]
 gi|418316131|ref|ZP_12927575.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21340]
 gi|418318217|ref|ZP_12929627.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21232]
 gi|418427328|ref|ZP_13000340.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS2]
 gi|418430169|ref|ZP_13003085.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS3a]
 gi|418433130|ref|ZP_13005910.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS4]
 gi|418436805|ref|ZP_13008607.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS5]
 gi|418439676|ref|ZP_13011384.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS6]
 gi|418442729|ref|ZP_13014331.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS7]
 gi|418445788|ref|ZP_13017264.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS8]
 gi|418448732|ref|ZP_13020124.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS9]
 gi|418451556|ref|ZP_13022890.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS10]
 gi|418561885|ref|ZP_13126360.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21262]
 gi|418569089|ref|ZP_13133429.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21272]
 gi|418570829|ref|ZP_13135090.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21283]
 gi|418579023|ref|ZP_13143118.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1114]
 gi|418638184|ref|ZP_13200487.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-3]
 gi|418642777|ref|ZP_13204963.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-24]
 gi|418643746|ref|ZP_13205904.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-55]
 gi|418647714|ref|ZP_13209777.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-88]
 gi|418649435|ref|ZP_13211463.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-91]
 gi|418654625|ref|ZP_13216521.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-99]
 gi|418657805|ref|ZP_13219560.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-111]
 gi|418873480|ref|ZP_13427775.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-125]
 gi|418878043|ref|ZP_13432278.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1165]
 gi|418880870|ref|ZP_13435089.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1213]
 gi|418883799|ref|ZP_13437994.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1769]
 gi|418886453|ref|ZP_13440601.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1150]
 gi|418894812|ref|ZP_13448909.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1057]
 gi|418903401|ref|ZP_13457442.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1770]
 gi|418906127|ref|ZP_13460154.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC345D]
 gi|418911798|ref|ZP_13465781.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG547]
 gi|418914290|ref|ZP_13468262.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC340D]
 gi|418920271|ref|ZP_13474204.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC348]
 gi|418925425|ref|ZP_13479327.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG2018]
 gi|418928449|ref|ZP_13482335.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1612]
 gi|418931259|ref|ZP_13485101.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1750]
 gi|418946962|ref|ZP_13499361.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-157]
 gi|418991055|ref|ZP_13538716.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1096]
 gi|419775373|ref|ZP_14301315.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CO-23]
 gi|419785561|ref|ZP_14311313.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-M]
 gi|421150076|ref|ZP_15609732.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newbould 305]
 gi|422743417|ref|ZP_16797401.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|424785022|ref|ZP_18211825.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus CN79]
 gi|440708391|ref|ZP_20889057.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21282]
 gi|440734638|ref|ZP_20914250.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus DSM
           20231]
 gi|443637313|ref|ZP_21121395.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21236]
 gi|443640116|ref|ZP_21124113.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21196]
 gi|54039673|sp|P67509.1|SYI_STAAN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|54042036|sp|P67508.1|SYI_STAAM RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|81859601|sp|Q5HGN8.1|SYI_STAAC RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|123407059|sp|Q2FZ82.1|SYI_STAA8 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|123749624|sp|Q2FHP4.1|SYI_STAA3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|166229773|sp|A7X1D8.1|SYI_STAA1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|172048846|sp|A6QG93.1|SYI_STAAE RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|189082335|sp|A6U113.1|SYI_STAA2 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|189082336|sp|A5IS79.1|SYI_STAA9 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|189082337|sp|A8Z3N1.1|SYI_STAAT RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|13700992|dbj|BAB42288.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14246963|dbj|BAB57355.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|57285949|gb|AAW38043.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87127392|gb|ABD21906.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202457|gb|ABD30267.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147740754|gb|ABQ49052.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946195|gb|ABR52131.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374115|dbj|BAF67375.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156721649|dbj|BAF78066.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368176|gb|ABX29147.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253724462|gb|EES93191.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257789723|gb|EEV28063.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839311|gb|EEV63785.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257844307|gb|EEV68689.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848023|gb|EEV72016.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257850023|gb|EEV73976.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257853828|gb|EEV76787.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257857467|gb|EEV80365.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257860499|gb|EEV83326.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257863241|gb|EEV86005.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259160427|gb|EEW45452.1| Ile-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259163222|gb|EEW47782.1| Ile-tRNA synthetase [Staphylococcus aureus D30]
 gi|262075098|gb|ACY11071.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282589197|gb|EFB94294.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282594690|gb|EFB99674.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282764676|gb|EFC04801.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285816875|gb|ADC37362.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294967984|gb|EFG44012.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297177147|gb|EFH36401.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|315130984|gb|EFT86968.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315196923|gb|EFU27266.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320143048|gb|EFW34838.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329313861|gb|AEB88274.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329725029|gb|EGG61525.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
 gi|329727539|gb|EGG63995.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|334277482|gb|EGL95712.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21318]
 gi|341845342|gb|EGS86544.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21266]
 gi|341847174|gb|EGS88359.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21259]
 gi|341854827|gb|EGS95689.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21201]
 gi|365167166|gb|EHM58642.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21209]
 gi|365238402|gb|EHM79239.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21334]
 gi|365241802|gb|EHM82537.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21340]
 gi|365243665|gb|EHM84336.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21232]
 gi|371975161|gb|EHO92461.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21262]
 gi|371978274|gb|EHO95524.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21272]
 gi|371983009|gb|EHP00157.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21283]
 gi|374363081|gb|AEZ37186.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VC40]
 gi|375014450|gb|EHS08131.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-99]
 gi|375015890|gb|EHS09534.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-24]
 gi|375023408|gb|EHS16871.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-3]
 gi|375028044|gb|EHS21400.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-55]
 gi|375029424|gb|EHS22752.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-88]
 gi|375029808|gb|EHS23133.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-91]
 gi|375039969|gb|EHS32879.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-111]
 gi|375366017|gb|EHS70029.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-125]
 gi|375377159|gb|EHS80649.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-157]
 gi|377694165|gb|EHT18530.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1165]
 gi|377695676|gb|EHT20036.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1057]
 gi|377697050|gb|EHT21405.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1114]
 gi|377714886|gb|EHT39084.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1769]
 gi|377715092|gb|EHT39289.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1750]
 gi|377723177|gb|EHT47302.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1096]
 gi|377725176|gb|EHT49291.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG547]
 gi|377725406|gb|EHT49519.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1150]
 gi|377731763|gb|EHT55816.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1213]
 gi|377738361|gb|EHT62370.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1612]
 gi|377742416|gb|EHT66401.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1770]
 gi|377744494|gb|EHT68471.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG2018]
 gi|377757792|gb|EHT81680.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC340D]
 gi|377765427|gb|EHT89277.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC345D]
 gi|377765630|gb|EHT89479.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC348]
 gi|383362531|gb|EID39882.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus IS-M]
 gi|383971057|gb|EID87147.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CO-23]
 gi|387718564|gb|EIK06522.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS3a]
 gi|387718915|gb|EIK06871.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS2]
 gi|387725796|gb|EIK13394.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS4]
 gi|387727909|gb|EIK15409.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS5]
 gi|387730779|gb|EIK18137.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS6]
 gi|387735716|gb|EIK22826.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS8]
 gi|387737394|gb|EIK24460.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS7]
 gi|387737948|gb|EIK25002.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS9]
 gi|387744437|gb|EIK31201.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS10]
 gi|394329466|gb|EJE55568.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newbould 305]
 gi|408423397|emb|CCJ10808.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
 gi|408425387|emb|CCJ12774.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
 gi|408427375|emb|CCJ14738.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
 gi|408429362|emb|CCJ26527.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
 gi|408431350|emb|CCJ18665.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
 gi|408433344|emb|CCJ20629.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
 gi|408435335|emb|CCJ22595.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
 gi|408437320|emb|CCJ24563.1| Isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ST228]
 gi|421956432|gb|EKU08761.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus CN79]
 gi|436431666|gb|ELP29019.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus DSM
           20231]
 gi|436504974|gb|ELP40935.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21282]
 gi|443405863|gb|ELS64454.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21196]
 gi|443405894|gb|ELS64484.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21236]
          Length = 917

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|329767098|ref|ZP_08258626.1| isoleucyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328837823|gb|EGF87448.1| isoleucyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 910

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/465 (45%), Positives = 288/465 (61%), Gaps = 40/465 (8%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGNL 165
           K T+ +PKT F MR N   +EPE  K W++  ++ ++ +KN G+ ++VLHDGPPYANGN+
Sbjct: 5   KDTLLMPKTKFPMRGNLPNKEPEFLKRWEEMDLYNKILEKNAGKPSYVLHDGPPYANGNI 64

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKD I +YK +  +   YVPGWD HGLPIE +VL +   D +K +  +K R
Sbjct: 65  HIGHALNKILKDFIVKYKNMNGFVSNYVPGWDTHGLPIE-QVLVNNGVD-RKSMPANKFR 122

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            K   +A   V  Q A FK+ GV  DW+NPYLTLDP++EA QI VFG+M  +GYIY+G K
Sbjct: 123 NKCKDYALKQVDKQRADFKKLGVLGDWDNPYLTLDPKFEAEQIRVFGKMVDKGYIYKGLK 182

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           P++WSPSS +ALAEAE+EY + H S SIY  F +VS   +               +WTTT
Sbjct: 183 PIYWSPSSESALAEAEIEYHD-HTSPSIYVAFELVSENGAVE-------KGTKFVIWTTT 234

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN  +AV+   +Y VV+      G+S                      +VA + V
Sbjct: 235 PWTLPANLGIAVHPDFEYQVVKYN----GES---------------------YLVAKERV 269

Query: 406 PTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
             L  K+G       + L G DLE     HP  +R   +++  DY+T +SGTGLVHTAPG
Sbjct: 270 AFLAEKFGWENYETGEVLVGKDLEYLLCKHPFLDRTSTLIL-ADYVTLDSGTGLVHTAPG 328

Query: 465 HGQEDY-VTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           HG +DY V  L+Y L +LSPVD++G  TEEAG+F+G  V  D N  ++ +LDE  +L+ +
Sbjct: 329 HGVDDYLVGQLQYKLGVLSPVDNQGVLTEEAGQFAGKFVF-DANKDIIAHLDETGALLKQ 387

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
           E   H YP+DWR+KKP IFRAT QWF SV+ FR   ++A+   K+
Sbjct: 388 EDITHSYPHDWRSKKPIIFRATPQWFCSVDAFRSELLEAVDNTKF 432



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 113/193 (58%), Gaps = 11/193 (5%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS---ISY 634
           GA+++RLW +SVDYT DV I   +L+Q+S+ YRK+R T R+LLGNL +    N    ++Y
Sbjct: 614 GAEIIRLWSASVDYTQDVRISKDILKQVSETYRKIRNTFRFLLGNLFNGSFNNKTDLVAY 673

Query: 635 DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTG 694
           ++L  +D+Y + + E +V  + + YE+YQF  I   +  F  V+LS+FY D  KD LY  
Sbjct: 674 ENLEELDKYMVLKFEKVVAKVLDYYENYQFNSITTELINFFNVELSSFYLDYGKDILYIE 733

Query: 695 GTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYTLEDGSAAEFV- 749
           G  S  R S  TVL   L   VR++APIL   AE+V+ N+P+    +  L D  A   + 
Sbjct: 734 GEDSHKRLSMLTVLYTVLSKSVRLLAPILSFTAEEVYDNMPYEDAESVHLTDFPAKNVIE 793

Query: 750 ---FESKWPVLDE 759
               E+KW  L E
Sbjct: 794 DAALEAKWDKLLE 806


>gi|386737718|ref|YP_006210899.1| Isoleucyl-tRNA synthetase 1 [Bacillus anthracis str. H9401]
 gi|384387570|gb|AFH85231.1| Isoleucyl-tRNA synthetase 1 [Bacillus anthracis str. H9401]
          Length = 913

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/464 (45%), Positives = 288/464 (62%), Gaps = 45/464 (9%)

Query: 112 LPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGNLHMGHA 170
           +PKT F MR N   REP + + W +  ++  V +   G   FVLHDGPPYANG++HMGHA
Sbjct: 1   MPKTEFPMRGNLPKREPAMQEKWAEMNIYETVQEHTKGRPLFVLHDGPPYANGDIHMGHA 60

Query: 171 LNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPSKLRAKA 228
           LNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T ++ R   
Sbjct: 61  LNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTVAEFRKLC 116

Query: 229 AKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVH 288
           A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+
Sbjct: 117 AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVY 176

Query: 289 WSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWT 348
           WSP+S +ALAEAE+EY +   S SIY  F +        G       D    +WTTTPWT
Sbjct: 177 WSPTSESALAEAEIEYQDKK-SASIYVAFSVKDGKNVLEG-------DEKYIIWTTTPWT 228

Query: 349 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 408
           +PAN  ++V+ +L+YA+V++                       D+K    I+AS+L  T+
Sbjct: 229 LPANLGISVHPELEYAIVKVN----------------------DEK---YIIASELFETV 263

Query: 409 EA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHG 466
               +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG
Sbjct: 264 AKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHG 321

Query: 467 QEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPY 526
           ++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +L+     
Sbjct: 322 EDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFI 380

Query: 527 EHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 381 THSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 424



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 589 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 647

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 648 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 707

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 708 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 762


>gi|297208165|ref|ZP_06924595.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300912243|ref|ZP_07129686.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|296886904|gb|EFH25807.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300886489|gb|EFK81691.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 920

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 6   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 65

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 66  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 124 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 184 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 235

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 236 TPWTIPSNVAITVHPELKYGQYNVDG----------------------EKYIIAEALSDA 273

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 274 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 332

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 333 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 391

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 392 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 430



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 121/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 608 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 667

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI+  +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 668 DTDSITESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 727

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 728 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 786

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 787 MPKVVEVDQALLD-KWRTF 804


>gi|253733568|ref|ZP_04867733.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|304381246|ref|ZP_07363899.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|422745577|ref|ZP_16799516.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|253728438|gb|EES97167.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|304340229|gb|EFM06170.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320140992|gb|EFW32839.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           MRSA131]
          Length = 920

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 6   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 65

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 66  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 124 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 184 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 235

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 236 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 273

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 274 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 332

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 333 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 391

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 392 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 430



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 608 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 667

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 668 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 727

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 728 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 786

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 787 MPKVVEVDQALLD-KWRTF 804


>gi|418900600|ref|ZP_13454657.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1214]
 gi|418916988|ref|ZP_13470947.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1267]
 gi|418982106|ref|ZP_13529814.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1242]
 gi|377703068|gb|EHT27384.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1214]
 gi|377704387|gb|EHT28696.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1242]
 gi|377750162|gb|EHT74100.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1267]
          Length = 917

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFNV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/233 (40%), Positives = 134/233 (57%), Gaps = 8/233 (3%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R   P  F  +  +F   EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGVSPYKFLLSHGFFMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVK 653
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI   +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750

Query: 714 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF--VFESKWPVLDEKWRTF 764
            + +++APIL H AE+VW + P     E    A+   V E    +LD KWRTF
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLADMPKVVEVDQALLD-KWRTF 801


>gi|384547435|ref|YP_005736688.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
 gi|298694484|gb|ADI97706.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 917

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +S+   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSVPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|257885188|ref|ZP_05664841.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257821040|gb|EEV48174.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 932

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/469 (44%), Positives = 296/469 (63%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++++++ +  + N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENRIYQKRQELNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +         +L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++A+ G   + + K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQAEIGWENVTVLKEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|417904169|ref|ZP_12547999.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21269]
 gi|341847992|gb|EGS89161.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21269]
          Length = 917

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +S+   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSVPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|424763057|ref|ZP_18190536.1| isoleucine--tRNA ligase [Enterococcus faecium TX1337RF]
 gi|431763889|ref|ZP_19552437.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3548]
 gi|402423524|gb|EJV55737.1| isoleucine--tRNA ligase [Enterococcus faecium TX1337RF]
 gi|430621713|gb|ELB58465.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3548]
          Length = 932

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/469 (44%), Positives = 294/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W+++Q++ +    N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENQIYQKRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q   FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLKKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +        G+L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++ + G   + + K  AG ++E     HP  +R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQTEIGWENVTVLKEFAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVDWVIP 433



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|417655626|ref|ZP_12305336.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
 gi|418321964|ref|ZP_12933303.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           VCU006]
 gi|418875127|ref|ZP_13429387.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC93]
 gi|448744996|ref|ZP_21726872.1| isoleucine--tRNA ligase [Staphylococcus aureus KT/Y21]
 gi|329728844|gb|EGG65265.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
 gi|365224579|gb|EHM65844.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           VCU006]
 gi|377770187|gb|EHT93949.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIGC93]
 gi|445561705|gb|ELY17896.1| isoleucine--tRNA ligase [Staphylococcus aureus KT/Y21]
          Length = 917

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|294848186|ref|ZP_06788933.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294824986|gb|EFG41408.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9754]
          Length = 917

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|224476295|ref|YP_002633901.1| isoleucyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254782437|sp|B9DPP7.1|SYI_STACT RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|222420902|emb|CAL27716.1| putative isoleucyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 915

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 212/464 (45%), Positives = 286/464 (61%), Gaps = 45/464 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EPEI K WD+  ++ ++ +KN G E+++LHDGPPYANGN
Sbjct: 3   YKDTLLMPKTDFPMRGGLPKKEPEIQKQWDEQDLYHKILEKNKGHESYILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           LHMGHALNKILKD I RYK +Q Y   YVPGWD HGLPIE    Q+L +    +K++  S
Sbjct: 63  LHMGHALNKILKDFIVRYKSMQGYYSPYVPGWDTHGLPIE----QALTKKGVKRKEMPIS 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R    +FA   +  Q   FKR GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+
Sbjct: 119 EFRKLCEEFALEQIDIQKKDFKRLGVNGDFNDPYITLKPEYEAAQIRLFGEMADRGLIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           GKKPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++E   D    +W
Sbjct: 179 GKKPVYWSPSSESSLAEAEIEYHDKR-SPSIYVAFDVKDG----KGVVDE---DAKFIIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+ V+  L+Y     Q  + G+                       +V  
Sbjct: 231 TTTPWTLPSNVAITVHPDLKYG----QYNVNGEK---------------------YVVGQ 265

Query: 403 DLVPTLEAKWG---TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           DLV  +  + G     + ++K   G +LE     HP  +R   +VI G ++TT++GTG V
Sbjct: 266 DLVEEVAEELGWDKEDIQLEKEFTGKELEYVETQHPFIDR-VSLVINGLHVTTDAGTGAV 324

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++DY+   KY LP++SP++D+G FTEE G+F G+      N AV   L E  S
Sbjct: 325 HTAPGHGEDDYIVGQKYNLPVISPLNDKGVFTEEGGQFEGM-FYDKANKAVTDLLKENGS 383

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
           L+  +   H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 384 LLKLKFITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/233 (38%), Positives = 135/233 (57%), Gaps = 8/233 (3%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSSVDY  D
Sbjct: 574 RGQSPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQIVKQKGADIARLWVSSVDYLSD 630

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 653
           V I  ++L+Q +D+YRK+R TLR++LGN++D+    +++   DL  +D+Y L +L    +
Sbjct: 631 VRISDEILKQTADVYRKIRNTLRFMLGNVNDFNPETDAVPESDLLEVDRYLLNRLREFTE 690

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           +I   Y+++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 SIINHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKQDSHKRRSMQTVLYQILV 750

Query: 714 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP--VLDEKWRTF 764
            + +++APIL H +E+VW  +P  +  E+      + E   P   L EKW TF
Sbjct: 751 DMTKLLAPILAHTSEEVWSYIP--HVKEESVHLADMPEVVKPDEELLEKWNTF 801


>gi|379020900|ref|YP_005297562.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M013]
 gi|418951867|ref|ZP_13503934.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-160]
 gi|359830209|gb|AEV78187.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M013]
 gi|375371039|gb|EHS74830.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           IS-160]
          Length = 917

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|418598300|ref|ZP_13161810.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21343]
 gi|374399657|gb|EHQ70793.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21343]
          Length = 917

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEIDQALLD-KWRTF 801


>gi|384864420|ref|YP_005749779.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|312829587|emb|CBX34429.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ECT-R 2]
          Length = 917

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 IPKVVEVDQALLD-KWRTF 801


>gi|319892187|ref|YP_004149062.1| isoleucyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|386319541|ref|YP_006015704.1| isoleucine-tRNA ligase [Staphylococcus pseudintermedius ED99]
 gi|317161883|gb|ADV05426.1| Isoleucyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464712|gb|ADX76865.1| isoleucine-tRNA ligase [Staphylococcus pseudintermedius ED99]
          Length = 915

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/469 (44%), Positives = 293/469 (62%), Gaps = 45/469 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + W +  ++ ++ +KN+G+ +F+LHDGPPYANGN
Sbjct: 3   YKDTLLMPKTKFPMRGGLPTKEPQIQQEWKEKDLYRKMLEKNEGQPSFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           LHMGHALNKILKD INRYK +Q +   YVPGWD HGLPIE    Q+L +    +K++T +
Sbjct: 63  LHMGHALNKILKDFINRYKTMQGFYTPYVPGWDTHGLPIE----QALTKKGVKRKEMTTA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R K   FA   +  Q   F R GV  D++NPY+TL PEYEAAQI +FG+M+ +G IY+
Sbjct: 119 EFRDKCQAFAMEQIDIQKKDFLRLGVNGDFDNPYITLKPEYEAAQIRLFGEMADKGLIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           GKKPV+WSPSS ++LAEAE+EY +   S SIY  F +      + G++ +   D    +W
Sbjct: 179 GKKPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDSKGIVAD---DAKFIIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+ V+ +L Y    +Q  ++G                        I+A 
Sbjct: 231 TTTPWTLPSNVAITVHPELTY----VQMNVDGTR---------------------YIIAE 265

Query: 403 DLVPTLEAK--WGTKLVIK-KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
            LV  +  +  W  + V++ K   GS+LE     HP  +R   ++I G+++TT++GTG V
Sbjct: 266 ALVDAVAEQLGWDKEAVVREKDFKGSELEYIEAQHPFIDR-ISLIINGEHVTTDAGTGCV 324

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL ++SP+DD+G FT E G F G+      N AV + L E+ +
Sbjct: 325 HTAPGHGEDDFIVGQKYGLEVISPLDDKGVFTAEGGPFEGM-FYDKANQAVTELLTEKGA 383

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
           L+  +   H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI   K+
Sbjct: 384 LLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAIEDTKF 432



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/201 (41%), Positives = 122/201 (60%), Gaps = 9/201 (4%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP       GAD+ RLWVSSVDY  DV I  ++L Q++D+YRK+R TLR+LLGN++D+  
Sbjct: 605 VPDTIVKQKGADIARLWVSSVDYLADVRISDEILNQVADVYRKIRNTLRFLLGNINDYNP 664

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + I+  DL  +D+Y L +L        + YES+ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 ATDRIAEADLLEVDRYILNRLREFTAGTLDHYESFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL----PFAYTLEDG 743
           KD LY     +  RRS QTVL   L+++ +++API+PH AE+VW ++      +  L + 
Sbjct: 725 KDILYIEEKNAHKRRSMQTVLFEILVNMTKLLAPIIPHTAEEVWSHIEQVDEESVHLTNM 784

Query: 744 SAAEFVFESKWPVLDEKWRTF 764
            A E V ++    L +KW TF
Sbjct: 785 PAKEEVDQA----LLDKWNTF 801


>gi|221140635|ref|ZP_03565128.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|384861787|ref|YP_005744507.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|302751016|gb|ADL65193.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
          Length = 917

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q F+ V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFLNVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|282916443|ref|ZP_06324205.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282319883|gb|EFB50231.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
          Length = 917

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|82750799|ref|YP_416540.1| isoleucyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123754638|sp|Q2YXH4.1|SYI_STAAB RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|82656330|emb|CAI80746.1| isoleucyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 917

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIELEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q F+ V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFLNVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|424768619|ref|ZP_18195883.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CM05]
 gi|402348510|gb|EJU83496.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus CM05]
          Length = 920

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 6   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 65

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 66  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 124 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 184 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 235

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 236 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 273

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 274 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 332

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 333 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGI-FYDKANKAVTDLLTEKGALLKLD 391

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 392 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 430



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 608 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 667

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 668 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 727

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 728 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 786

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 787 MPKVVEVDQALLD-KWRTF 804


>gi|418280884|ref|ZP_12893706.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21178]
 gi|365166985|gb|EHM58462.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21178]
          Length = 917

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|333924454|ref|YP_004498034.1| isoleucyl-tRNA synthetase [Desulfotomaculum carboxydivorans
           CO-1-SRB]
 gi|333750015|gb|AEF95122.1| Isoleucyl-tRNA synthetase [Desulfotomaculum carboxydivorans
           CO-1-SRB]
          Length = 930

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/467 (44%), Positives = 291/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  T++LP+T F MR N   REPEI K W +  ++ +V +KN G+  ++LHDGPPYANG+
Sbjct: 3   YGKTLNLPQTDFPMRGNLPQREPEILKKWAEIDLYHKVQEKNQGKPKYILHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH LNK+LKD++ +Y+ +  Y   YVPGWD HGLPIE + ++SL  + +  ++P + 
Sbjct: 63  IHLGHTLNKVLKDMVVKYRSMSGYDAPYVPGWDTHGLPIEQQAIKSLGIN-RHQVSPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A    K Q   F+R GV  DW++PY TL P+YEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RHKCKEYALNFAKIQSEEFQRLGVRGDWDHPYYTLIPQYEATQIRVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W  S  TALAEAE+EY +   S SIY  F +        G+L +   D  + +WTT
Sbjct: 182 KPVYWCASCETALAEAEVEYAD-KTSPSIYVKFPVKDG----KGVLPQ---DASVVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A++V+ +  Y V  +     G+                      ++VA +L
Sbjct: 234 TPWTLPANVAISVHPEFAYVVATVN----GEK---------------------VVVAREL 268

Query: 405 VPTLEAKWGT-KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + + +   G     I   L G  LE     HP  +R+  +VI GD++T ++GTG VHTAP
Sbjct: 269 LESFKQAVGADNAEILAALKGEQLERVTCRHPFVDRES-LVILGDHVTLDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED+    KY LP+L+P+D++G+FT E GKF+G  +L D N  +V+ L E+ +L+  
Sbjct: 328 GHGEEDFEVGKKYNLPVLAPLDNKGRFTAEGGKFAGQFIL-DANKTIVEELKERGALMAH 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              +H+YP+ WR K P  FRATEQWFASVEGFRQ A+ AI  VKWVP
Sbjct: 387 GHIKHQYPHCWRCKNPIFFRATEQWFASVEGFRQEALKAIRNVKWVP 433



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 70/159 (44%), Positives = 109/159 (68%), Gaps = 1/159 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSS DY GD+ +   +L+QM++ YRK+R T R+LLGNL+D+    + + Y D
Sbjct: 618 GADILRLWVSSADYRGDLSVSQNILKQMTESYRKIRNTARFLLGNLYDFDPAKDKVDYAD 677

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           LP +D+ AL +L  ++K +  +YE+Y+F  ++  I  F ++D+S FY D+ KDRLYT   
Sbjct: 678 LPELDRVALMELHKLIKRVLAAYENYEFHVVYHAIHNFCVLDMSAFYLDIIKDRLYTAPP 737

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
            S  RR+ QTVL   L ++VR++ P+L    E+++Q++P
Sbjct: 738 ASRERRAAQTVLYEVLDALVRLLVPVLAFTTEEIYQHMP 776


>gi|256846630|ref|ZP_05552086.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294784339|ref|ZP_06749630.1| isoleucine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|256717850|gb|EEU31407.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294487911|gb|EFG35266.1| isoleucine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 933

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 216/528 (40%), Positives = 310/528 (58%), Gaps = 56/528 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           Y  T+ LPKT F M+AN   +EP+  K W + +++ +  +KN +GE F+LHDGPPYANGN
Sbjct: 6   YTSTLHLPKTDFQMKANLPNKEPKYIKKWTEEKIYEKGLEKNKNGETFILHDGPPYANGN 65

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
            H+GHALNKILKDII +YK  + ++  YVPGWD HGLPIEL+V++ +     ++++  ++
Sbjct: 66  THIGHALNKILKDIILKYKTFRGFRSPYVPGWDTHGLPIELQVVKEVGVAKAREMSALEI 125

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    K+A+  V  Q   F R GV  DW+NPYLTLDP +EA Q+E+FG++   GYI++G 
Sbjct: 126 RQLCEKYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYENGYIFKGL 185

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLAVW 342
           KPV+WSP++ TALAEAE+EY + HVS SIY   RM     +   LL++  F  D  + +W
Sbjct: 186 KPVYWSPATETALAEAEIEYYD-HVSPSIYV--RM----QANKDLLDKIGFNEDAYVLIW 238

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+ +N    Y +                 K+  GN         +I+A 
Sbjct: 239 TTTPWTLPANVAICLNENFDYGLY----------------KTEKGN---------LILAK 273

Query: 403 DLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           DL  +     G +   + K   G DLE   Y HP   R   +VI GD++T ++GTG VHT
Sbjct: 274 DLAESAFKDIGIENFELIKEFKGKDLEYTTYKHPFLER-TGLVILGDHVTADAGTGAVHT 332

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSL 520
           APGHGQ+DYV  L Y + ++SP+D  G  TEEAG  F GL    D N A++K+L E   +
Sbjct: 333 APGHGQDDYVVGLNYKISVISPIDHRGCLTEEAGDLFKGL-FYSDANKAIIKHLTETGHI 391

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP------- 571
           +  +   H YP+DWR+K P IFRATEQWF  +EG   R+  + AI ++ ++P        
Sbjct: 392 LKTQEISHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKTLKAIDKINFIPSWGKNRIG 451

Query: 572 ---QEAPGYGADVLRLWVSSV-----DYTGDVMIGPQVLRQMSDIYRK 611
              +  P +     R+W   +     D T + +   ++L ++ D+ R+
Sbjct: 452 SMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDRICDLVRE 499



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 85/196 (43%), Positives = 128/196 (65%), Gaps = 15/196 (7%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIVKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+  ID++AL +LE + +++ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRSVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 754
             S  RR+ QTV+   L+++ +++APIL   AE++W++LP A T E    AE +F + W 
Sbjct: 744 EDSVARRAAQTVMYEVLMTLTKMVAPILSFTAEEIWESLP-AETRE----AESIFLADWY 798

Query: 755 --------PVLDEKWR 762
                   P LDEKW+
Sbjct: 799 VNNDEYLKPELDEKWQ 814


>gi|425056575|ref|ZP_18460026.1| isoleucine--tRNA ligase [Enterococcus faecium 505]
 gi|403031605|gb|EJY43205.1| isoleucine--tRNA ligase [Enterococcus faecium 505]
          Length = 932

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/469 (44%), Positives = 294/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W+ +Q++ +  + N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEKNQIYQKRQELNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q   FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLEKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +        G+L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++ + G   + + K  AG ++E     HP  +R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQTEIGWENVTVLKEFAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVDWVIP 433



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|423612110|ref|ZP_17587971.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD107]
 gi|401247117|gb|EJR53461.1| isoleucyl-tRNA synthetase 1 [Bacillus cereus VD107]
          Length = 921

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 212/471 (45%), Positives = 293/471 (62%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG
Sbjct: 2   EYKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHALNK+LKD I R+K +  Y   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  DIHMGHALNKVLKDFIVRFKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTV 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R   A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCAEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G+KPV+WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +
Sbjct: 178 KGQKPVYWSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+A
Sbjct: 230 WTTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIA 264

Query: 402 SDLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L  T+    +W    V+ KT+ GS+LE     HP  +R   V++ G+++TT++GTG V
Sbjct: 265 SELFDTVAKTLEWENTEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GEHVTTDAGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +
Sbjct: 323 HTAPGHGEDDFLVGKKYGLEVLCPVDDKGVLTSEAPGFEGL-FYDKANKPITEKLEEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 382 LLKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQAVEETKWVP 432



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 115/177 (64%), Gaps = 2/177 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 597 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 655

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+    N++   +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 656 NLDDFNPSENTVVAAELREVDRYMLVKLNDLITKVKEAYEAYDFAAVYHAIHNFCTIDLS 715

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P A
Sbjct: 716 SFYLDFAKDILYIEGANHHDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVPGA 772


>gi|387142803|ref|YP_005731196.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TW20]
 gi|418424331|ref|ZP_12997454.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS1]
 gi|418454612|ref|ZP_13025874.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS11a]
 gi|418457488|ref|ZP_13028691.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS11b]
 gi|269940686|emb|CBI49066.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TW20]
 gi|387720634|gb|EIK08541.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS1]
 gi|387745727|gb|EIK32477.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS11a]
 gi|387747220|gb|EIK33929.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           VRS11b]
          Length = 917

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/233 (40%), Positives = 134/233 (57%), Gaps = 8/233 (3%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R   P  F  +  +F   EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGVSPYKFLLSHGFFMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVK 653
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI   +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750

Query: 714 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF--VFESKWPVLDEKWRTF 764
            + +++APIL H AE+VW + P     E    A+   V E    +LD KWRTF
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLADMPKVVEVDQALLD-KWRTF 801


>gi|431758416|ref|ZP_19547043.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3083]
 gi|430617474|gb|ELB54347.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3083]
          Length = 932

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/469 (44%), Positives = 294/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W+++Q++ +    N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENQIYQKRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q   FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLKKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +        G+L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYLLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++ + G   + + K  AG ++E     HP  +R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQTEIGWENVTVLKEFAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVDWVIP 433



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|312622414|ref|YP_004024027.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312202881|gb|ADQ46208.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 920

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/473 (45%), Positives = 300/473 (63%), Gaps = 44/473 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +  T++LPKT F MRAN   REP+  K W ++ +F ++ +KN + + F+LHDGPPYANG+
Sbjct: 3   WSQTLNLPKTDFPMRANLAQREPQFLKFWQENDIFKKMLEKNKNNKKFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK+LKDI+N+YK L  Y   Y+PGWD HGLPIE +V++ L  + + ++ P + 
Sbjct: 63  IHLGHALNKVLKDIVNKYKSLHGYYTPYIPGWDTHGLPIEQQVIKKLGVN-RHEIDPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA + +  Q   FKR GV+ +W NPY+TLDP++EA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKKCKEFALSYIDIQRQQFKRLGVFGEWENPYMTLDPKFEARQIRVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP----DLGLA 340
           KPV+W PS  TALAEAE+EY E   + SIY  F ++       GL +  LP     + + 
Sbjct: 182 KPVYWCPSCETALAEAEIEYQEDR-TYSIYVKFEVI----DDKGLFSN-LPIRDKKVYIV 235

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTT WT+P N A+A+NA   Y++++I                  GN +       ++V
Sbjct: 236 IWTTTTWTLPGNLAIALNADFDYSLIDI------------------GNEI-------LVV 270

Query: 401 ASDLVPTLEAKWGTKLVIKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           AS+LV  +      K+   K +A   G DLE  +  HP  +R   +VI G+++T E+GTG
Sbjct: 271 ASELVERVMK--TNKIEQYKEIARFKGKDLEYVKCKHPFLDRT-SLVILGEHVTLEAGTG 327

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
            VHTAPGHG+ED+    KY +P++ PVD++G  T+EAGKF+GL    D N  + K L+  
Sbjct: 328 CVHTAPGHGEEDFEVCQKYNIPVIVPVDNKGYLTKEAGKFAGL-FYEDSNKEIAKELEAS 386

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             L+  E   H+YP+ WR K P IFRATEQWFASV+GFR  A+ A+  VKWVP
Sbjct: 387 GHLLGVEKITHQYPHCWRCKNPVIFRATEQWFASVKGFRDQALKAVDDVKWVP 439



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 137/209 (65%), Gaps = 9/209 (4%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           +GAD+LRLW  S DYT D+ I   +++Q+++IYRK+R T R+LLGNL+D+    + + Y+
Sbjct: 619 FGADILRLWCVSADYTTDMRISKDIIKQLTEIYRKIRNTARFLLGNLYDFNPKTDKVGYE 678

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  ID++AL +L  +++ + ++YE Y + +++ ++  F ++D+SN Y D+ KDRLY   
Sbjct: 679 NLKEIDKWALQRLYKLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASK 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
           + S  RRS QTV+   L+++ ++IAPIL   AE++WQN+ F    ED   AE VF + WP
Sbjct: 739 SESLDRRSAQTVMYEILIALTKLIAPILSFTAEEIWQNIIFKE--ED---AESVFLTSWP 793

Query: 756 VLDEK-WRTFPVGEIYFWGKILEVIVVVT 783
            ++E   R   + E   W KI+E+  +V+
Sbjct: 794 SINEDILRDEALREK--WDKIIEIKDIVS 820


>gi|257888495|ref|ZP_05668148.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257824549|gb|EEV51481.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
          Length = 930

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/467 (44%), Positives = 293/467 (62%), Gaps = 39/467 (8%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGNL 165
           K T+ L KT F MR N   RE E  K W+++Q++ +    N+G+ +FVLHDGPPYANGN+
Sbjct: 2   KETLQLGKTKFPMRGNLPNREGEWQKEWEENQIYQKRQKLNEGKPSFVLHDGPPYANGNI 61

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++  
Sbjct: 62  HLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAEYL 119

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            K  ++A + V  Q   FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G K
Sbjct: 120 KKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLK 179

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           P++WSPSS ++LAEAE+EY +   S SI+  F +        G+L+E   D    +WTTT
Sbjct: 180 PIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KGILDE---DTAFVIWTTT 231

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN  +AVN K  Y +VE                        D +K   +VA DL+
Sbjct: 232 PWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKDLL 266

Query: 406 PTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
            T++ + G   + + K  AG ++E     HP  +R+  +VI GD++T ++GTGLVHTAPG
Sbjct: 267 ETVQTEIGWENVTVLKEFAGQEMEYMTASHPFYDRES-LVILGDHVTLDAGTGLVHTAPG 325

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  +
Sbjct: 326 HGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLD 384

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 385 FFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVDWVIP 431



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 602 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 661

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 662 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 721

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 722 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 768


>gi|390339216|ref|XP_784868.3| PREDICTED: isoleucine--tRNA ligase, mitochondrial-like
           [Strongylocentrotus purpuratus]
          Length = 980

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/475 (43%), Positives = 286/475 (60%), Gaps = 33/475 (6%)

Query: 100 KKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPP 159
           + +  RY  T++LP T+F +   A  RE  +       +++    D    +NF LHDGPP
Sbjct: 29  RHKSSRYSDTLNLPNTSFELWG-AGKREQSVQSACGFSELYAWQRDSLREKNFTLHDGPP 87

Query: 160 YANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDL 219
           YANG++H+GHALNKILKDIINRYKL++ YKV YVPGWDCHGLPIELK L    ED +K L
Sbjct: 88  YANGDVHVGHALNKILKDIINRYKLMRGYKVHYVPGWDCHGLPIELKALTESKEDFRK-L 146

Query: 220 TPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGY 279
           +  ++R +A KFA   +++QM +FKR+G+ ADW+N Y T D EYEA+Q+++F  M  +G+
Sbjct: 147 SALQIRYQARKFALKAIESQMTAFKRWGIMADWDNCYYTFDKEYEASQLQLFHDMYQKGF 206

Query: 280 IYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL---PD 336
           IYR  KPV+WSPSSRTALAEAELEY   H+S +IY  F  + AP   S LL + L    +
Sbjct: 207 IYRDVKPVNWSPSSRTALAEAELEYNPHHISPAIYVKFS-IHAP---STLLADALGNTDN 262

Query: 337 LGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKV 396
             + +WTTTPWT+PAN AV   A   Y ++E +                      D +  
Sbjct: 263 AAVVIWTTTPWTIPANQAVCYMADKDYCLLECKG--------------------TDDR-- 300

Query: 397 FIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGT 456
            +I+ASD V  L+  WG  L I  T +G  LE C   HP+D      ++  +++    GT
Sbjct: 301 -LIIASDRVADLKEVWGRDLRIITTFSGRCLEGCSLYHPLDPCHHVPLLAANHVKMGLGT 359

Query: 457 GLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEE-AGKFSGLDVLGDGNVAVVKYLD 515
           GL+HTAP HG EDY  ++++ L +   VD EG +T++   +  G +VL D N  V+  L 
Sbjct: 360 GLIHTAPAHGAEDYGVAIQHNLKVTCQVDSEGFYTDDLREELRGKNVLLDANQTVIDMLA 419

Query: 516 EQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              +L+ +E YEH YPYDWRTKKP I RA++QWF +    R  A + + ++   P
Sbjct: 420 SSKNLLHQEDYEHSYPYDWRTKKPIIIRASKQWFINTASLRDTASECLDEIDMRP 474



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 104/190 (54%), Gaps = 7/190 (3%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           ++ P YGADVLR  ++  D+ G + +GP +    +    KLR T RY LGNL D++    
Sbjct: 656 KKEPAYGADVLRWRMADSDWMGRINVGPDLFAMTNQNIIKLRNTFRYFLGNLSDFKPSEG 715

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
            + +  P+ D+Y L  L     ++  +YE Y+F ++ +     +   +S+FY +  KDRL
Sbjct: 716 -AVETTPL-DRYMLHLLHEYSDHVTRAYEDYEFSEVTRSAMDLVHNKISSFYLETVKDRL 773

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           Y     S  RRSCQTVL   L  I R +API+PHLAE+V  +L ++   E    A  VF+
Sbjct: 774 YCERGDSEKRRSCQTVLHHMLEVISRSLAPIVPHLAEEV--HLHYSKQQE---GAGSVFK 828

Query: 752 SKWPVLDEKW 761
           S W   D +W
Sbjct: 829 SGWMTPDPEW 838


>gi|358468101|ref|ZP_09177738.1| isoleucine--tRNA ligase [Fusobacterium sp. oral taxon 370 str.
           F0437]
 gi|357065527|gb|EHI75719.1| isoleucine--tRNA ligase [Fusobacterium sp. oral taxon 370 str.
           F0437]
          Length = 933

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 215/531 (40%), Positives = 314/531 (59%), Gaps = 56/531 (10%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYA 161
           E  Y  T+ LPKT F M+AN   +EP+  + W + +++ +  +KN +GE+F+LHDGPPYA
Sbjct: 3   EKEYTSTLHLPKTDFQMKANLPNKEPKYIEKWTEEKIYEKGLEKNKNGESFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGN H+GHALNKILKDII +YK  + ++  YVPGWD HGLPIEL+V++ +     ++++P
Sbjct: 63  NGNTHIGHALNKILKDIIIKYKTFRGFRSPYVPGWDTHGLPIELQVVKEVGIAKAREMSP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            ++R +  ++A+  V  Q   F R GV  DW+NPYLTLDP +EA Q+E+FG++  +GYI+
Sbjct: 123 LEIRKRCEEYARKWVGIQKEQFIRLGVLGDWDNPYLTLDPRFEAKQLELFGEIYEKGYIF 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGL 339
           +G KPV+WSP + TALAEAE+EY + H S SIY   RM     +   LL++  F  D  +
Sbjct: 183 KGLKPVYWSPVTETALAEAEIEYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAFV 235

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN A+ +N    Y +                 K+  GN         +I
Sbjct: 236 LIWTTTPWTLPANVAICLNENFDYGLY----------------KTEKGN---------LI 270

Query: 400 VASDLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A +L  +     G +   + K   G +LE   Y HP   R   ++I GD++T ++GTG 
Sbjct: 271 LAKELAESAFKDIGIENAELLKEFKGKELEYTTYQHPFLER-TGLIILGDHVTADAGTGA 329

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQ 517
           VHTAPGHGQEDYV  L Y LP++SP+D  G  TEEAG  F GL V  + N A+VK+L E 
Sbjct: 330 VHTAPGHGQEDYVVGLNYKLPVVSPIDHRGCLTEEAGDLFKGL-VYSEANKAIVKHLTET 388

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP---- 571
             ++  +   H YP+DWR+K P IFRATEQWF  +EG   R+  +  I ++ ++P     
Sbjct: 389 GHILKMQEITHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKTLKVIDEINFIPAWGKN 448

Query: 572 ------QEAPGYGADVLRLWVSSV-----DYTGDVMIGPQVLRQMSDIYRK 611
                 +  P +     R+W   +     D T + +   ++L ++ D+ R+
Sbjct: 449 RIGSMMETRPDWCISRQRVWGVPIPIFYNDETNEEIFHKEILDRLCDLVRE 499



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 89/196 (45%), Positives = 128/196 (65%), Gaps = 15/196 (7%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIIKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+  ID++AL +LE + +N+ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRNVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 754
             S  RR+ QTV+   L+++ ++IAPIL   AE++W+NLP A T E    AE VF + W 
Sbjct: 744 KDSVARRAAQTVMYEVLMTLTKMIAPILSFTAEEIWENLP-AETRE----AESVFLADWY 798

Query: 755 --------PVLDEKWR 762
                   P LDEKW+
Sbjct: 799 VNNDEYLNPELDEKWQ 814


>gi|219670052|ref|YP_002460487.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|254782390|sp|B8FT35.1|SYI_DESHD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|219540312|gb|ACL22051.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 922

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/466 (42%), Positives = 288/466 (61%), Gaps = 36/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y++T++LP+T F MR N   REPEI + W++  ++  V     G   FVLHDGPPYANG+
Sbjct: 3   YRNTLNLPETDFPMRGNLPQREPEILQKWEEEDIYATVQKARAGRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK++KDII +YK +  +   YVPGWD HGLPIE +V++ L  + +  ++  + 
Sbjct: 63  IHLGHALNKVIKDIIVKYKTMAGFDAPYVPGWDTHGLPIEQQVIKKLGVN-RHAVSVVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++AK  +  Q   FKR GV  DW NPYLTL+ EYEAAQI VFG+M+ + YIY+G 
Sbjct: 122 RRMCKEYAKKYISIQKEQFKRLGVRGDWQNPYLTLEKEYEAAQIGVFGKMARKKYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W PS  TALAEAE+EY E   S +IY  F +        G+L +   +  + +WTT
Sbjct: 182 KPVYWCPSCETALAEAEIEYAE-KTSHAIYVKFPVKEG----KGVLTD--ENTFVIIWTT 234

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+ ++ +  Y  V+++                         K   +VA  +
Sbjct: 235 TPWTLPANLAITLHEEFSYVQVQVE-------------------------KEHWLVAEGM 269

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           + +L + W  +L ++K   G +LE     HP   R   V+I G+++T E+GTG VHTAPG
Sbjct: 270 LESLRSLWNLELPVEKRFVGKELEGVICKHPFIERDS-VLILGEHVTLEAGTGCVHTAPG 328

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG+ED+    KYGLP+L PVD +GKFT E G ++G+ V    N  +++ L    +L+ E+
Sbjct: 329 HGEEDFNVGKKYGLPVLCPVDHQGKFTAEGGAYAGMKV-DKANPVIIEDLKNLHALVHED 387

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             +H Y + WR   P I+RATEQWFAS++GFR+AA++ I +V+W+P
Sbjct: 388 KIKHSYAHCWRCNNPIIYRATEQWFASIDGFRKAALEEIDKVQWIP 433



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 110/167 (65%), Gaps = 1/167 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P Q     GAD+LRLWV + DY  DV + P++++QMS+ YRK+R TLR+LL NL+D+   
Sbjct: 605 PLQVTKEMGADILRLWVCAADYKNDVAVSPRIMKQMSEAYRKIRNTLRFLLSNLNDFDPA 664

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + ++Y DLP ID++AL QL  + + + + YE Y+F  ++  +  F  V+LS  Y D+ K
Sbjct: 665 KDRVAYKDLPEIDRWALLQLGKVTQRVLQGYEKYEFHWVYHSVHNFCAVELSAIYLDIVK 724

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           DRLY  G  S  RR+ QTVL   L ++VR++AP+L + A+++W  +P
Sbjct: 725 DRLYVEGKNSTLRRASQTVLYDVLNALVRLMAPVLTYTADEIWPYVP 771


>gi|418282941|ref|ZP_12895698.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21202]
 gi|365168538|gb|EHM59876.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21202]
          Length = 917

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 280/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R   +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRDS-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 119/199 (59%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP Q     GAD+ RLWVSS DY  DV I   +L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDDILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +S+   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 ETDSVPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|89895628|ref|YP_519115.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|123091718|sp|Q24TH1.1|SYI_DESHY RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|89335076|dbj|BAE84671.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 922

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/466 (42%), Positives = 288/466 (61%), Gaps = 36/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y++T++LP+T F MR N   REPEI + W++  ++  V     G   FVLHDGPPYANG+
Sbjct: 3   YRNTLNLPETDFPMRGNLPQREPEILQKWEEEDIYATVQKARAGRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK++KDII +YK +  +   YVPGWD HGLPIE +V++ L  + +  ++  + 
Sbjct: 63  IHLGHALNKVIKDIIVKYKTMAGFDAPYVPGWDTHGLPIEQQVIKKLGVN-RHAVSVVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++AK  +  Q   FKR GV  DW NPYLTL+ EYEAAQI VFG+M+ + YIY+G 
Sbjct: 122 RRMCKEYAKKYISIQKEQFKRLGVRGDWKNPYLTLEKEYEAAQIGVFGKMARKKYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W PS  TALAEAE+EY E   S +IY  F +        G+L +   +  + +WTT
Sbjct: 182 KPVYWCPSCETALAEAEIEYAE-KTSHAIYVKFPVKEG----KGVLTD--ENTFVIIWTT 234

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+ ++ +  Y  V+++                         K   +VA  +
Sbjct: 235 TPWTLPANLAITLHEEFSYVQVQVE-------------------------KEHWLVAEGM 269

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           + +L + W  +L ++K   G +LE     HP   R   V+I G+++T E+GTG VHTAPG
Sbjct: 270 LESLRSLWNLELPVEKRFVGKELEGVICKHPFIERDS-VLILGEHVTLEAGTGCVHTAPG 328

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG+ED+    KYGLP+L PVD +GKFT E G ++G+ V    N  +++ L    +L+ E+
Sbjct: 329 HGEEDFNVGKKYGLPVLCPVDHQGKFTAEGGAYAGMKV-DKANPVIIEDLKNLHALVHED 387

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             +H Y + WR   P I+RATEQWFAS++GFR+AA++ I +V+W+P
Sbjct: 388 KIKHSYAHCWRCNNPIIYRATEQWFASIDGFRKAALEEIDKVQWIP 433



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 110/167 (65%), Gaps = 1/167 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P Q     GAD+LRLWV + DY  DV + P++++QMS+ YRK+R TLR+LL NL+D+   
Sbjct: 605 PLQVTKEMGADILRLWVCAADYKNDVAVSPRIMKQMSEAYRKIRNTLRFLLSNLNDFDPA 664

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + ++Y DLP ID++AL QL  + + + + YE Y+F  ++  +  F  V+LS  Y D+ K
Sbjct: 665 KDRVAYKDLPEIDRWALLQLGKVTQRVLQGYEKYEFHWVYHSVHNFCAVELSAIYLDIVK 724

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           DRLY  G  S  RR+ QTVL   L ++VR++AP+L + A+++W  +P
Sbjct: 725 DRLYVEGKNSTLRRASQTVLYDVLNALVRLMAPVLTYTADEIWPYVP 771


>gi|229162831|ref|ZP_04290788.1| Isoleucyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228620713|gb|EEK77582.1| Isoleucyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 913

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 214/466 (45%), Positives = 290/466 (62%), Gaps = 49/466 (10%)

Query: 112 LPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGNLHMGHA 170
           +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG++HMGHA
Sbjct: 1   MPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHA 60

Query: 171 LNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPSKLRAKA 228
           LNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T ++ R   
Sbjct: 61  LNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTVAEFRKLC 116

Query: 229 AKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVH 288
           A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+
Sbjct: 117 AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVY 176

Query: 289 WSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWT 348
           WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +WTTTPWT
Sbjct: 177 WSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKFIIWTTTPWT 228

Query: 349 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL---- 404
           +PAN  ++V+ +L+Y++V++                       D+K    I+AS+L    
Sbjct: 229 LPANLGISVHPELEYSIVKVN----------------------DEK---YIIASELFETV 263

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V TLE  W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPG
Sbjct: 264 VKTLE--WENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPG 319

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +L+   
Sbjct: 320 HGEDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLT 378

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 379 FITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 424



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 589 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 647

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 648 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 707

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 708 SFYLDFAKDILYIEGANHADRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVP 762


>gi|418559181|ref|ZP_13123727.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21252]
 gi|371975472|gb|EHO92766.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21252]
          Length = 917

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 280/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R   +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRDS-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|379795559|ref|YP_005325557.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSHR1132]
 gi|356872549|emb|CCE58888.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSHR1132]
          Length = 916

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/459 (44%), Positives = 282/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGIVDS---DAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        QK +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVDG----------------------QKYIVAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K  +G +LE     HP  +R+  +VI G+++TT++GTG VHTAPG
Sbjct: 271 VAEALGWDKDSIKLEKEFSGKELEYVVAQHPFLDRES-LVINGEHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   R+  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRKDILDAI 427



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 119/199 (59%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP Q     GAD+ RLWVSS DY  DV I   +L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDDILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +S+   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 ETDSVPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|226313405|ref|YP_002773299.1| isoleucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|254782371|sp|C0ZG86.1|SYI_BREBN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|226096353|dbj|BAH44795.1| isoleucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 925

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/469 (43%), Positives = 292/469 (62%), Gaps = 42/469 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           Y  T+ LPKT F MR N   REP++  +W++  ++ +V D+  D  +FVLHDGPPYANG+
Sbjct: 3   YSKTLALPKTEFPMRGNLPSREPQMQAVWEEQNIYQQVLDRTKDRPSFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL--QSLDEDAKKDLTPS 222
           +H+GHALNKILKD I RYK +  +   Y+PGWD HGLPIE  ++  Q LD   ++ +  +
Sbjct: 63  IHIGHALNKILKDFIVRYKSMAGFYAPYIPGWDTHGLPIEQAIINAQGLD---RRSIEVN 119

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
             R +  ++A + +  Q   FKR GV  DW NPY+TL PEYEA QI VFG+M+ +GYIY+
Sbjct: 120 DFRQRCEEYAWSYIDKQRDQFKRLGVRGDWENPYVTLLPEYEANQIRVFGEMAKKGYIYK 179

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G + V+WSPSS TALA+AE+EY +   S SIY  F++        G L+    + G+ +W
Sbjct: 180 GLRCVYWSPSSETALADAEIEYKDKR-SPSIYVSFQVADG----KGKLD---IETGVVIW 231

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A++++ +L+Y VV++                       D +K   +VA+
Sbjct: 232 TTTPWTLPANLAISLHPELEYNVVKV-----------------------DGRK--FLVAN 266

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            L+     + G + V I  T  G +LE     HP  +R+ P+++ G+++T ++GTG VHT
Sbjct: 267 GLIEAASKEIGWEGVEILATFKGQELEGVETQHPFYDRKSPLIL-GEHVTLDAGTGCVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++D+    KY L +L PVD EGK T EA  F GL    D N  + + L E  +L+
Sbjct: 326 APGHGEDDFNVGQKYNLGVLCPVDHEGKMTNEAPGFEGL-FYEDANKVITEKLKENGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               + H YP+DWRTKKP I+RATEQWFAS++GFR   ++AI  VKW+P
Sbjct: 385 KLSFFTHSYPHDWRTKKPVIYRATEQWFASIDGFRTQMLEAIKNVKWIP 433



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 111/168 (66%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP Q     GAD+LRLWV+SVDY  DV I   +L Q++++YRK+R T R+LLGNL  +  
Sbjct: 604 VPQQVIDKMGADILRLWVASVDYQADVRISDAILNQIAEVYRKIRNTFRFLLGNLDGFNP 663

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + ++Y++L  +D+Y L +   + K  R++Y+ YQF  +F  +  F ++DLS FY D+ 
Sbjct: 664 ATDRVAYEELGELDRYVLAKAAKVAKRTRKAYDEYQFHTVFHAVHNFCVIDLSAFYLDIC 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KDRLY     S  RR+ QTV+   LLS+V+++AP+LPH A++VW  +P
Sbjct: 724 KDRLYVEAPDSLKRRAAQTVMYDCLLSLVKLVAPLLPHTADEVWAFIP 771


>gi|385781420|ref|YP_005757591.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           11819-97]
 gi|418574657|ref|ZP_13138824.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21333]
 gi|364522409|gb|AEW65159.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           11819-97]
 gi|371978788|gb|EHO96029.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21333]
          Length = 917

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVGG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|423073768|ref|ZP_17062505.1| isoleucine--tRNA ligase [Desulfitobacterium hafniense DP7]
 gi|361855390|gb|EHL07366.1| isoleucine--tRNA ligase [Desulfitobacterium hafniense DP7]
          Length = 922

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/466 (42%), Positives = 288/466 (61%), Gaps = 36/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y++T++LP+T F MR N   REPEI + W++  ++  V     G   FVLHDGPPYANG+
Sbjct: 3   YRNTLNLPETDFPMRGNLPQREPEILQKWEEEDIYAAVQKARAGRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK++KDII +YK +  +   YVPGWD HGLPIE +V++ L  + +  ++  + 
Sbjct: 63  IHLGHALNKVIKDIIVKYKTMAGFDAPYVPGWDTHGLPIEQQVIKKLGVN-RHAVSVVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++AK  +  Q   FKR GV  DW NPYLTL+ EYEAAQI VFG+M+ + YIY+G 
Sbjct: 122 RRMCKEYAKKYISIQKEQFKRLGVRGDWQNPYLTLEKEYEAAQIGVFGKMARKKYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W PS  TALAEAE+EY E   S +IY  F +        G+L +   +  + +WTT
Sbjct: 182 KPVYWCPSCETALAEAEIEYAE-KTSHAIYVKFPVKEG----KGVLTD--ENTFVIIWTT 234

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+ ++ +  Y  V+++                         K   +VA  +
Sbjct: 235 TPWTLPANLAITLHEEFSYVQVQVE-------------------------KEHWLVAEGM 269

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           + +L + W  +L ++K   G +LE     HP   R   V+I G+++T E+GTG VHTAPG
Sbjct: 270 LESLRSLWNLELPVEKRFVGKELEGVICKHPFIERDS-VLILGEHVTLEAGTGCVHTAPG 328

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG+ED+    KYGLP+L PVD +GKFT E G ++G+ V    N  +++ L    +L+ E+
Sbjct: 329 HGEEDFNVGKKYGLPVLCPVDHQGKFTAEGGAYAGMKV-DKANPVIIEDLKNLHALVHED 387

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             +H Y + WR   P I+RATEQWFAS++GFR+AA++ I +V+W+P
Sbjct: 388 KIKHSYAHCWRCNNPIIYRATEQWFASIDGFRKAALEEIDKVQWIP 433



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 110/167 (65%), Gaps = 1/167 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P Q     GAD+LRLWV + DY  DV + P++++QMS+ YRK+R TLR+LL NL+D+   
Sbjct: 605 PLQVTKEMGADILRLWVCAADYKNDVAVSPRIMKQMSEAYRKIRNTLRFLLSNLNDFDPA 664

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + ++Y DLP ID++AL QL  + + + + YE Y+F  ++  +  F  V+LS  Y D+ K
Sbjct: 665 KDRVAYKDLPEIDRWALLQLGKVTQRVLQGYEKYEFHWVYHSVHNFCAVELSAIYLDIVK 724

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           DRLY  G  S  RR+ QTVL   L ++VR++AP+L + A+++W  +P
Sbjct: 725 DRLYVEGKNSTLRRASQTVLYDVLNALVRLMAPVLTYTADEIWPYVP 771


>gi|308173505|ref|YP_003920210.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|384159475|ref|YP_005541548.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|384164089|ref|YP_005545468.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
 gi|384168523|ref|YP_005549901.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens XH7]
 gi|307606369|emb|CBI42740.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328553563|gb|AEB24055.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328911644|gb|AEB63240.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
 gi|341827802|gb|AEK89053.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens XH7]
          Length = 921

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/467 (43%), Positives = 287/467 (61%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REP++ K W++  ++  V ++  D   FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGNLPNREPDMQKDWEEQDIYRLVQERTKDRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++   + +K+++ +  
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKNKKVN-RKEMSVADF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q   FKR GV  DW NPY+TL PE+EA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEEYAWQQIERQREQFKRLGVRGDWENPYVTLQPEFEAQQIRVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F++        G+L          +WTT
Sbjct: 182 KPVNWSPSSESALAEAEIEYQDKR-SASIYVAFKVKDG----KGVLEN---GESFIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L+Y V+++     GD                       +VA++L
Sbjct: 234 TPWTIPANLGISVHPDLEYNVIKV-----GDKR--------------------YVVAAEL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + ++    G     +  +  G +LE     HP+  R   V++ GD++TT++GTG VHTAP
Sbjct: 269 IESVAQACGFENPEVVASYKGRELEYITAEHPLYGRDSLVML-GDHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD++G  T+EA  F G+      N  + + L+E  +L+  
Sbjct: 328 GHGEDDFIVGQKYGLEVLCPVDEKGNMTDEAPGFEGM-FYDKANKPITEKLEENGALLKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E   H YP+DWRTKKPTIFRAT QWFAS++ FR   +DAI Q KWVP
Sbjct: 387 EFITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLDAIQQTKWVP 433



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 109/168 (64%), Gaps = 1/168 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 605 PTKIAKQLGAEILRLWVSSVNYQADHPVSEDILKQVAEVYRKVRNTFRFLHGNLFDFDPS 664

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            N+++  DL  +DQY L +L  ++  ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 665 VNAVAVKDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYHSIHNFCTIELSSFYLDFAK 724

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           D +Y        RRS QTV    LL++V++ APILPH A+++W +L F
Sbjct: 725 DVVYIEHADHPDRRSMQTVFYETLLALVKLTAPILPHTADEMWSHLSF 772


>gi|406580476|ref|ZP_11055669.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD4E]
 gi|406582689|ref|ZP_11057787.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD3E]
 gi|406584968|ref|ZP_11059964.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD2E]
 gi|406590351|ref|ZP_11064720.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD1E]
 gi|410937028|ref|ZP_11368890.1| isoleucyl-tRNA ligase [Enterococcus sp. GMD5E]
 gi|404453853|gb|EKA00885.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD4E]
 gi|404457679|gb|EKA04209.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD3E]
 gi|404463187|gb|EKA08883.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD2E]
 gi|404469420|gb|EKA14226.1| isoleucyl-tRNA synthetase [Enterococcus sp. GMD1E]
 gi|410734621|gb|EKQ76540.1| isoleucyl-tRNA ligase [Enterococcus sp. GMD5E]
          Length = 932

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/469 (44%), Positives = 296/469 (63%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++++++ +  + N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENRIYQKRQELNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +         +L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++++ G   + + K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|293553195|ref|ZP_06673832.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291602605|gb|EFF32820.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 932

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/469 (44%), Positives = 296/469 (63%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++++++ +  + N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENRIYQKRQELNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +         +L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++++ G   + + K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|69244704|ref|ZP_00602968.1| Isoleucyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257879376|ref|ZP_05659029.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257881758|ref|ZP_05661411.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|260558818|ref|ZP_05831007.1| isoleucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206528|ref|ZP_05921228.1| isoleucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565438|ref|ZP_06445887.1| isoleucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293568290|ref|ZP_06679614.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294614701|ref|ZP_06694603.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294619001|ref|ZP_06698496.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294621613|ref|ZP_06700778.1| isoleucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314950111|ref|ZP_07853397.1| isoleucine--tRNA ligase [Enterococcus faecium TX0082]
 gi|383328095|ref|YP_005353979.1| isoleucyl-tRNA synthetase [Enterococcus faecium Aus0004]
 gi|389867985|ref|YP_006375408.1| isoleucine--tRNA ligase [Enterococcus faecium DO]
 gi|415898391|ref|ZP_11551276.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4453]
 gi|416130926|ref|ZP_11597589.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4452]
 gi|424789437|ref|ZP_18216091.1| isoleucine--tRNA ligase [Enterococcus faecium V689]
 gi|424809968|ref|ZP_18235336.1| isoleucine--tRNA ligase [Enterococcus faecium S447]
 gi|424826044|ref|ZP_18250985.1| isoleucine--tRNA ligase [Enterococcus faecium R501]
 gi|424859459|ref|ZP_18283467.1| isoleucine--tRNA ligase [Enterococcus faecium R499]
 gi|424901151|ref|ZP_18324688.1| isoleucine--tRNA ligase [Enterococcus faecium R497]
 gi|424951730|ref|ZP_18366798.1| isoleucine--tRNA ligase [Enterococcus faecium R496]
 gi|424955096|ref|ZP_18369956.1| isoleucine--tRNA ligase [Enterococcus faecium R494]
 gi|424958664|ref|ZP_18373300.1| isoleucine--tRNA ligase [Enterococcus faecium R446]
 gi|424959603|ref|ZP_18374181.1| isoleucine--tRNA ligase [Enterococcus faecium P1986]
 gi|424964060|ref|ZP_18378201.1| isoleucine--tRNA ligase [Enterococcus faecium P1190]
 gi|424969219|ref|ZP_18382802.1| isoleucine--tRNA ligase [Enterococcus faecium P1140]
 gi|424973333|ref|ZP_18386621.1| isoleucine--tRNA ligase [Enterococcus faecium P1137]
 gi|424982084|ref|ZP_18394767.1| isoleucine--tRNA ligase [Enterococcus faecium ERV99]
 gi|424985813|ref|ZP_18398273.1| isoleucine--tRNA ligase [Enterococcus faecium ERV69]
 gi|424988376|ref|ZP_18400698.1| isoleucine--tRNA ligase [Enterococcus faecium ERV38]
 gi|424990631|ref|ZP_18402837.1| isoleucine--tRNA ligase [Enterococcus faecium ERV26]
 gi|424998818|ref|ZP_18410481.1| isoleucine--tRNA ligase [Enterococcus faecium ERV165]
 gi|425002665|ref|ZP_18414085.1| isoleucine--tRNA ligase [Enterococcus faecium ERV161]
 gi|425004809|ref|ZP_18416094.1| isoleucine--tRNA ligase [Enterococcus faecium ERV102]
 gi|425009765|ref|ZP_18420759.1| isoleucine--tRNA ligase [Enterococcus faecium E422]
 gi|425014538|ref|ZP_18425212.1| isoleucine--tRNA ligase [Enterococcus faecium E417]
 gi|425019154|ref|ZP_18429540.1| isoleucine--tRNA ligase [Enterococcus faecium C621]
 gi|425019563|ref|ZP_18429911.1| isoleucine--tRNA ligase [Enterococcus faecium C497]
 gi|425023878|ref|ZP_18433973.1| isoleucine--tRNA ligase [Enterococcus faecium C1904]
 gi|425031126|ref|ZP_18436269.1| isoleucine--tRNA ligase [Enterococcus faecium 515]
 gi|425039757|ref|ZP_18444261.1| isoleucine--tRNA ligase [Enterococcus faecium 513]
 gi|425061062|ref|ZP_18464327.1| isoleucine--tRNA ligase [Enterococcus faecium 503]
 gi|427395404|ref|ZP_18888326.1| isoleucyl-tRNA synthetase [Enterococcus durans FB129-CNAB-4]
 gi|430821332|ref|ZP_19439943.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0045]
 gi|430824071|ref|ZP_19442638.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0120]
 gi|430829503|ref|ZP_19447596.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0269]
 gi|430831542|ref|ZP_19449593.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0333]
 gi|430837029|ref|ZP_19455005.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0680]
 gi|430839107|ref|ZP_19457049.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0688]
 gi|430844771|ref|ZP_19462668.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1050]
 gi|430846893|ref|ZP_19464747.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1133]
 gi|430851039|ref|ZP_19468795.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1185]
 gi|430853477|ref|ZP_19471205.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1258]
 gi|430856780|ref|ZP_19474464.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1392]
 gi|430859682|ref|ZP_19477291.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1552]
 gi|430862434|ref|ZP_19479751.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1573]
 gi|430867384|ref|ZP_19482378.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1574]
 gi|430869878|ref|ZP_19483033.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1575]
 gi|430963170|ref|ZP_19487462.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1576]
 gi|431011088|ref|ZP_19489832.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1578]
 gi|431185992|ref|ZP_19500055.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1620]
 gi|431237081|ref|ZP_19503224.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1622]
 gi|431264016|ref|ZP_19505904.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1623]
 gi|431290542|ref|ZP_19506677.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1626]
 gi|431382760|ref|ZP_19511353.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1627]
 gi|431446026|ref|ZP_19513708.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1630]
 gi|431523810|ref|ZP_19516835.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1634]
 gi|431677804|ref|ZP_19524402.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1904]
 gi|431743243|ref|ZP_19532123.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2071]
 gi|431745481|ref|ZP_19534325.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2134]
 gi|431747871|ref|ZP_19536635.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2297]
 gi|431754102|ref|ZP_19542767.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2883]
 gi|431760587|ref|ZP_19549184.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3346]
 gi|431770080|ref|ZP_19558483.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1644]
 gi|431774392|ref|ZP_19562700.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2369]
 gi|431777053|ref|ZP_19565310.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2560]
 gi|431779319|ref|ZP_19567514.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4389]
 gi|431781360|ref|ZP_19569508.1| isoleucyl-tRNA synthetase [Enterococcus faecium E6012]
 gi|431784991|ref|ZP_19573026.1| isoleucyl-tRNA synthetase [Enterococcus faecium E6045]
 gi|447913350|ref|YP_007394762.1| Isoleucyl-tRNA synthetase [Enterococcus faecium NRRL B-2354]
 gi|68196295|gb|EAN10724.1| Isoleucyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257813604|gb|EEV42362.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257817416|gb|EEV44744.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|260075277|gb|EEW63590.1| isoleucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260079238|gb|EEW66929.1| isoleucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289162767|gb|EFD10618.1| isoleucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291589002|gb|EFF20826.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291592439|gb|EFF24046.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291594662|gb|EFF26044.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291598778|gb|EFF29830.1| isoleucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|313643552|gb|EFS08132.1| isoleucine--tRNA ligase [Enterococcus faecium TX0082]
 gi|364090059|gb|EHM32690.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4453]
 gi|364093801|gb|EHM36037.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4452]
 gi|378937789|gb|AFC62861.1| isoleucyl-tRNA synthetase [Enterococcus faecium Aus0004]
 gi|388533234|gb|AFK58426.1| isoleucine--tRNA ligase [Enterococcus faecium DO]
 gi|402918201|gb|EJX38915.1| isoleucine--tRNA ligase [Enterococcus faecium S447]
 gi|402922117|gb|EJX42522.1| isoleucine--tRNA ligase [Enterococcus faecium V689]
 gi|402924713|gb|EJX44905.1| isoleucine--tRNA ligase [Enterococcus faecium R501]
 gi|402926491|gb|EJX46527.1| isoleucine--tRNA ligase [Enterococcus faecium R499]
 gi|402928951|gb|EJX48757.1| isoleucine--tRNA ligase [Enterococcus faecium R496]
 gi|402931320|gb|EJX50906.1| isoleucine--tRNA ligase [Enterococcus faecium R497]
 gi|402934983|gb|EJX54276.1| isoleucine--tRNA ligase [Enterococcus faecium R494]
 gi|402939561|gb|EJX58466.1| isoleucine--tRNA ligase [Enterococcus faecium R446]
 gi|402947474|gb|EJX65682.1| isoleucine--tRNA ligase [Enterococcus faecium P1190]
 gi|402949175|gb|EJX67256.1| isoleucine--tRNA ligase [Enterococcus faecium P1140]
 gi|402950117|gb|EJX68132.1| isoleucine--tRNA ligase [Enterococcus faecium P1986]
 gi|402958969|gb|EJX76250.1| isoleucine--tRNA ligase [Enterococcus faecium P1137]
 gi|402961840|gb|EJX78835.1| isoleucine--tRNA ligase [Enterococcus faecium ERV99]
 gi|402965064|gb|EJX81802.1| isoleucine--tRNA ligase [Enterococcus faecium ERV69]
 gi|402972075|gb|EJX88300.1| isoleucine--tRNA ligase [Enterococcus faecium ERV38]
 gi|402979119|gb|EJX94806.1| isoleucine--tRNA ligase [Enterococcus faecium ERV26]
 gi|402981855|gb|EJX97362.1| isoleucine--tRNA ligase [Enterococcus faecium ERV165]
 gi|402982848|gb|EJX98285.1| isoleucine--tRNA ligase [Enterococcus faecium ERV161]
 gi|402988454|gb|EJY03461.1| isoleucine--tRNA ligase [Enterococcus faecium ERV102]
 gi|402998605|gb|EJY12854.1| isoleucine--tRNA ligase [Enterococcus faecium E417]
 gi|402999199|gb|EJY13401.1| isoleucine--tRNA ligase [Enterococcus faecium C621]
 gi|403002019|gb|EJY16032.1| isoleucine--tRNA ligase [Enterococcus faecium E422]
 gi|403008486|gb|EJY21990.1| isoleucine--tRNA ligase [Enterococcus faecium C1904]
 gi|403011114|gb|EJY24443.1| isoleucine--tRNA ligase [Enterococcus faecium C497]
 gi|403014743|gb|EJY27713.1| isoleucine--tRNA ligase [Enterococcus faecium 513]
 gi|403016295|gb|EJY29119.1| isoleucine--tRNA ligase [Enterococcus faecium 515]
 gi|403041999|gb|EJY52975.1| isoleucine--tRNA ligase [Enterococcus faecium 503]
 gi|425723904|gb|EKU86790.1| isoleucyl-tRNA synthetase [Enterococcus durans FB129-CNAB-4]
 gi|430438595|gb|ELA49012.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0045]
 gi|430441455|gb|ELA51552.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0120]
 gi|430480942|gb|ELA58113.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0269]
 gi|430481425|gb|ELA58581.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0333]
 gi|430487810|gb|ELA64518.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0680]
 gi|430491104|gb|ELA67586.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0688]
 gi|430496202|gb|ELA72307.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1050]
 gi|430534796|gb|ELA75231.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1185]
 gi|430538447|gb|ELA78739.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1133]
 gi|430540558|gb|ELA80760.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1258]
 gi|430543219|gb|ELA83294.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1552]
 gi|430543893|gb|ELA83945.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1392]
 gi|430549012|gb|ELA88859.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1573]
 gi|430550395|gb|ELA90191.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1574]
 gi|430555595|gb|ELA95132.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1576]
 gi|430559255|gb|ELA98614.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1575]
 gi|430560110|gb|ELA99416.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1578]
 gi|430572645|gb|ELB11495.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1622]
 gi|430572977|gb|ELB11812.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1620]
 gi|430576452|gb|ELB15103.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1623]
 gi|430581131|gb|ELB19578.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1627]
 gi|430582642|gb|ELB21064.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1626]
 gi|430584768|gb|ELB23082.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1634]
 gi|430585670|gb|ELB23942.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1630]
 gi|430599297|gb|ELB37008.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1904]
 gi|430607077|gb|ELB44405.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2071]
 gi|430610237|gb|ELB47389.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2134]
 gi|430614747|gb|ELB51718.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2297]
 gi|430620025|gb|ELB56828.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2883]
 gi|430623672|gb|ELB60350.1| isoleucyl-tRNA synthetase [Enterococcus faecium E3346]
 gi|430634141|gb|ELB70276.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2369]
 gi|430635833|gb|ELB71912.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1644]
 gi|430639994|gb|ELB75848.1| isoleucyl-tRNA synthetase [Enterococcus faecium E2560]
 gi|430642174|gb|ELB77955.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4389]
 gi|430648547|gb|ELB83953.1| isoleucyl-tRNA synthetase [Enterococcus faecium E6045]
 gi|430649721|gb|ELB85089.1| isoleucyl-tRNA synthetase [Enterococcus faecium E6012]
 gi|445189059|gb|AGE30701.1| Isoleucyl-tRNA synthetase [Enterococcus faecium NRRL B-2354]
          Length = 932

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/469 (44%), Positives = 296/469 (63%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++++++ +  + N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENRIYQKRQELNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +         +L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++++ G   + + K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|417895605|ref|ZP_12539587.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21235]
 gi|341841502|gb|EGS82959.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21235]
          Length = 917

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/459 (45%), Positives = 282/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMAEKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y     Q  + GD                  K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYG----QYNVNGD------------------KYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++    G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLENEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|258423763|ref|ZP_05686649.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|418888983|ref|ZP_13443119.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1524]
 gi|257845995|gb|EEV70023.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|377754493|gb|EHT78402.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1524]
          Length = 917

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/459 (44%), Positives = 282/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVDS---DAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        QK +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVDG----------------------QKYIVAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K  +G +LE     HP  +R+  +VI G+++TT++GTG VHTAPG
Sbjct: 271 VAEALGWDKDSIKLEKEFSGKELEYVVAQHPFLDRKS-LVINGEHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   R+  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRKDILDAI 427



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 88/199 (44%), Positives = 121/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L    K+   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTKSTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|114566494|ref|YP_753648.1| isoleucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318441|sp|Q0AYC7.1|SYI_SYNWW RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|114337429|gb|ABI68277.1| Isoleucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 927

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/470 (44%), Positives = 291/470 (61%), Gaps = 38/470 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYA 161
           +G+Y  T++LP+T F MRAN   REPEI K WD+  ++ R+ +KN G   F+LHDGPPYA
Sbjct: 3   KGKYDGTLNLPQTGFPMRANLPQREPEILKFWDEIDIYRRIQEKNAGRPQFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKK-DLT 220
           NGN+H+GH LNK+LKDII +Y+ +  Y   Y+PGWD HGLPIE + +++L  D  K D+ 
Sbjct: 63  NGNIHLGHTLNKVLKDIIVKYRSMSGYDSPYIPGWDTHGLPIEQQAIKNLGIDRHKTDVV 122

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             + R     +A   V+ Q   FKR GV  DW +PYLTL P +E+ QI+VFG+M+ +G+I
Sbjct: 123 --EFREHCRDYALKYVEIQKEQFKRLGVRGDWEDPYLTLSPGFESIQIKVFGEMAKKGFI 180

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           Y+G KPV+W     TALAEAE+EY E  VS SIY  F +        G+L E   D  + 
Sbjct: 181 YKGLKPVYWCGDCETALAEAEVEYNE-KVSPSIYVKFPVKDG----KGVLPE---DAFVI 232

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN  + ++    Y ++E++                 G      + +   V
Sbjct: 233 IWTTTPWTLPANTGICLHPGFDYVLLEVK-----------------GEKYLLAQGLLEAV 275

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A +L       W    ++ K   G +LE     HP   R   +V+G +++T E+GTG VH
Sbjct: 276 AGEL------GWDNYQILDK-YKGEELERVICHHPFFARDSLLVLG-EHVTLEAGTGCVH 327

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG++D+    +YGL ++SPVDD G+FT EA KF GL V  D N AV++ L+++  L
Sbjct: 328 TAPGHGEDDFHVGQEYGLEVISPVDDRGRFTAEAEKFQGLYV-HDANKAVIEELEKRNML 386

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +     EH+YPY WR K+P I+RATEQWFAS++GFRQ A++AI  VKW+P
Sbjct: 387 LKAASIEHQYPYCWRCKQPIIYRATEQWFASIDGFRQDALNAIDTVKWIP 436



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 127/207 (61%), Gaps = 9/207 (4%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS-ISYDD 636
           GAD+LRLWVSS DY  DV + P +++Q ++ YRK+R T R++LGNL D+  G   +SYD 
Sbjct: 617 GADILRLWVSSADYRNDVSVSPNIIKQSAEAYRKIRNTCRFILGNLFDFDPGKERVSYDK 676

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQ+AL +L+ +++ + ++YE Y+F  +F  +  F  VDLSN YFD+ KD+LY    
Sbjct: 677 LSELDQWALLKLDKLIRRVTKAYEDYEFHVVFHSMHNFCTVDLSNIYFDILKDKLYCSHP 736

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 756
               R++ QTVL   + ++V ++ PIL   +E++W     +Y  ++G  AE V   +WP 
Sbjct: 737 QDAERKAAQTVLYDIINALVVMLTPILAFSSEEIW-----SYLKKEGQ-AESVQLLEWPQ 790

Query: 757 LDEKWRTFPVGEIYFWGKILEVIVVVT 783
            ++++    +       ++LE+  VVT
Sbjct: 791 ANDEYLNQAIENRM--SRVLELREVVT 815


>gi|431768788|ref|ZP_19557221.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1321]
 gi|430628656|gb|ELB65090.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1321]
          Length = 932

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/469 (44%), Positives = 296/469 (63%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++++++ +  + N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENRIYKKRQELNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +         +L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++++ G   + + K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|294783857|ref|ZP_06749179.1| isoleucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294479669|gb|EFG27448.1| isoleucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 933

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/475 (43%), Positives = 295/475 (62%), Gaps = 41/475 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYA 161
           E  Y  T+ LPKT F M+AN   +EP+    W + +++ +  +KN +GE+F+LHDGPPYA
Sbjct: 3   EKEYTSTLHLPKTDFQMKANLPNKEPKYITKWTEEKIYEKGLEKNKNGESFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGN H+GHALNKILKDII +YK  + ++  YVPGWD HGLPIEL+V++ +     ++++P
Sbjct: 63  NGNTHIGHALNKILKDIIIKYKTFRGFRSPYVPGWDTHGLPIELQVVKEVGLAKAREMSP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            ++R +  ++A+  V  Q   F R GV  +W+NPYLTLDP++EA Q+E+FG++  +GYI+
Sbjct: 123 LEIRKRCEEYARKWVGIQKEQFIRLGVLGNWDNPYLTLDPKFEAKQLELFGEIYEKGYIF 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGL 339
           +G KPV+WSP++ TALAEAE+EY + H S SIY   RM     +   LL++  F  D  +
Sbjct: 183 KGLKPVYWSPATETALAEAEIEYYD-HTSPSIYV--RM----QANKDLLDKIGFNEDAFV 235

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN A+ +N    Y +                 K+  GN         +I
Sbjct: 236 LIWTTTPWTLPANVAICLNENFDYGLY----------------KTEKGN---------LI 270

Query: 400 VASDLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A DL  +     G +   + K   G DLE   Y HP   R   +VI GD++T ++GTG 
Sbjct: 271 LAKDLAESAFKDIGIENAELLKEFKGKDLEYATYQHPFLER-TGLVILGDHVTADAGTGA 329

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQ 517
           VHTAPGHGQ+DYV  L Y LP++SP+D  G  TEEAG  F GL V  + N A++K+L E 
Sbjct: 330 VHTAPGHGQDDYVVGLNYKLPVISPIDHRGCLTEEAGDLFKGL-VYSEANKAIIKHLTET 388

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
             ++  +   H YP+DWR+K P IFRATEQWF  +EG   R+  +  I ++ ++P
Sbjct: 389 GHILKMQEINHSYPHDWRSKTPVIFRATEQWFIRMEGGDLREKTLKVIDEINFIP 443



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 85/196 (43%), Positives = 126/196 (64%), Gaps = 15/196 (7%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLW  SVDY  DV I   +++QMS+ YR++R T RY+LGN +D+    + ++Y 
Sbjct: 624 YGADILRLWCGSVDYRDDVRISDNIIKQMSEAYRRIRNTARYILGNSYDFNPKTDKVAYK 683

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+  ID++AL +LE + +N+ ESY+ Y+F+ +FQ I  F  +D+S FY D+ KDRLYT  
Sbjct: 684 DMLEIDKWALNKLEVLKRNVTESYDKYEFYNLFQGIHYFAAIDMSAFYLDIIKDRLYTEK 743

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW- 754
             S  RR+ QTV+   L+++ +++APIL   AE++W+NLP      +   AE VF + W 
Sbjct: 744 KDSVARRAAQTVMYEILMTLTKMVAPILSFTAEEIWENLP-----AEAREAESVFLADWY 798

Query: 755 --------PVLDEKWR 762
                   P LDEKW+
Sbjct: 799 VNNDEYLNPELDEKWQ 814


>gi|418324566|ref|ZP_12935800.1| isoleucine--tRNA ligase [Staphylococcus pettenkoferi VCU012]
 gi|365225253|gb|EHM66498.1| isoleucine--tRNA ligase [Staphylococcus pettenkoferi VCU012]
          Length = 917

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/469 (44%), Positives = 287/469 (61%), Gaps = 44/469 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD+ +++ +  +KN G  +++LHDGPPYANG 
Sbjct: 3   YKETLLMPKTAFPMRGGLPNKEPKIQEEWDEKEIYQKSLEKNKGNTSYILHDGPPYANGG 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           LHMGHALNKILKDII RYK +Q Y   YVPGWD HGLPIE    Q+L +    +K+++ S
Sbjct: 63  LHMGHALNKILKDIITRYKTMQGYYTPYVPGWDTHGLPIE----QALTKKGVKRKEMSVS 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R K  +FA   ++ Q   FKR GV  D++NPY+TL PEYEAAQ+ +FG+M+ +G IY+
Sbjct: 119 EFREKCKEFALNQIELQKKDFKRLGVSGDFDNPYITLKPEYEAAQLRLFGEMAAKGLIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WSPSS ++LAEAE+EY +   S SIY  F +         +++E   D    +W
Sbjct: 179 GLKPVYWSPSSESSLAEAEIEYHDKR-SPSIYVAFDVKDG----KNVVDE---DAQFIIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+ V+ +L Y                       G  L D  K   +V  
Sbjct: 231 TTTPWTLPANVAITVHPELTY-----------------------GEYLVDGHKY--VVGK 265

Query: 403 DLVPTLEAK--WGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           DLV  +     W T  + + K  +G DLE     HP    +  ++I GD++TT++GTG V
Sbjct: 266 DLVDDVAENLGWNTDDIELVKEFSGKDLEYVEAQHPFLEDRTVLLINGDHVTTDAGTGCV 325

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++DY+   KY LP++SPVD +G  TEEAG F+G +     N  +   L E  S
Sbjct: 326 HTAPGHGEDDYIVGTKYDLPVISPVDYKGVLTEEAGPFAG-EFYDKANKPITDLLKENGS 384

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
           L+  +   H YP+DWRTKKP IFRAT QWFAS++  RQ  +DAI +  +
Sbjct: 385 LLKLDFITHSYPHDWRTKKPVIFRATPQWFASIDKVRQDILDAIEETHF 433



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/235 (36%), Positives = 134/235 (57%), Gaps = 12/235 (5%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R + P     +  +F   EG + +   ++G V  VP Q     GAD+ RLWVSSVDY  D
Sbjct: 575 RNRSPYKMLLSHGFFMDGEGKKMSK--SLGNV-IVPEQIVKQKGADIARLWVSSVDYLAD 631

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 653
             I  ++++Q +D+YRK+R TLR++LGN++D+    ++I+  DL  +D+Y L +      
Sbjct: 632 ARISDEIIKQTADVYRKIRNTLRFMLGNVNDFNPETDAIAEADLLEVDRYILNRFREFTA 691

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           +  ++Y+++ +  I+Q +Q FI V+LSNFY D  KD LY    ++  RRS QTVL   ++
Sbjct: 692 STIKNYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEERSAHKRRSMQTVLYQIVV 751

Query: 714 SIVRVIAPILPHLAEDVWQNLPF----AYTLEDGSAAEFVFESKWPVLDEKWRTF 764
            + +++APIL H A++VW  +P     +  L D    + V       L EKW TF
Sbjct: 752 DMTKLLAPILAHTADEVWSYIPHVQEESVHLTDMPKVQDVDTE----LVEKWNTF 802


>gi|311029946|ref|ZP_07708036.1| isoleucyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 922

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 288/469 (61%), Gaps = 40/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANG 163
            YK T+ +PKT F MR N   REP++ + WD+  ++ +V D+  D   +VLHDGPPYANG
Sbjct: 2   EYKDTLLMPKTEFPMRGNLPNREPQLQQKWDEMDIYKKVQDRTKDRPMYVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNK+LKD I RYK +  Y   YVPGWD HGLPIE  + ++  +  +K+++ + 
Sbjct: 62  DIHMGHALNKVLKDFIVRYKSMSGYHAPYVPGWDTHGLPIETALTKN-KKVKRKEMSVAD 120

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   F R GV  DW NPY+TL PEYEA QI+VFG+M+  G IY+G
Sbjct: 121 FRKLCEEYAYDQVDRQREQFMRLGVRGDWFNPYITLKPEYEAQQIKVFGEMAKNGLIYKG 180

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS +ALAEAE+EY +   S SIY  F++        G            +WT
Sbjct: 181 LKPVYWSPSSESALAEAEIEYQDKR-SPSIYVAFKVEDGKGVLDG-------SESFIIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AV+A L Y+VVE+               S+             I+A++
Sbjct: 233 TTPWTIPANLGIAVHADLDYSVVEVNG-------------SK------------FIIAAE 267

Query: 404 LVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L  T+ +  +W    V+ KTL G++LE+    HP+ +R   V++ G+++TT++GTG VHT
Sbjct: 268 LFETVSSTLEWEDAKVV-KTLKGAELEHVVAKHPLYDRTSLVML-GEHVTTDAGTGCVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++D++   KYGL +L PVD +G  TEEA  F GL    + N  + + L E  +L+
Sbjct: 326 APGHGEDDFIIGKKYGLDVLCPVDAKGNMTEEAPGFEGL-FYDEANKPITEKLQEAGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                 H YP+DWRTKKPTIFRAT QWFAS++  R   ++A+ + KWVP
Sbjct: 385 KLNFITHSYPHDWRTKKPTIFRATAQWFASIDKIRDQLLEAVAETKWVP 433



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 71/169 (42%), Positives = 112/169 (66%), Gaps = 1/169 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-R 627
           +P +     GAD+LRLWV+SVDY  DV +   +L+Q++++YRK+R T R+LLGNL D+  
Sbjct: 604 LPSKVMNQLGADILRLWVASVDYQSDVRVSDNILKQVAEVYRKIRNTFRFLLGNLADFDS 663

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N++   DL  +D+Y + +L N++  +++SYE Y+F  I+  +  F  ++LS+FY D A
Sbjct: 664 TVNAVDVKDLREVDRYMMVKLNNLITKVKKSYEDYEFAGIYHAVHNFCTIELSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           KD LY  G     RR+ QTVL   LL++ +++ PILPH A++VW ++ F
Sbjct: 724 KDILYIEGKDQHDRRAIQTVLYETLLALTKLVTPILPHTADEVWSHIDF 772


>gi|302871850|ref|YP_003840486.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574709|gb|ADL42500.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 920

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 212/473 (44%), Positives = 302/473 (63%), Gaps = 44/473 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +  T++LPKT F MRAN   REP+  K W ++ +F ++ +KN + + F+LHDGPPYANG+
Sbjct: 3   WSQTLNLPKTDFPMRANLAQREPQFLKFWYENDIFKKMLEKNKNNKKFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK+LKDI+N+YK LQ Y   Y+PGWD HGLPIE +V++ L  + + ++ P + 
Sbjct: 63  IHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQVIKKLGVN-RHEVNPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA + +  Q   FKR GV+ +W NPY+TLDP++EA Q+ VFG+M+ +GYIY+G 
Sbjct: 122 RKKCKEFALSYIDIQRQQFKRLGVFGEWENPYMTLDPKFEARQVRVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP----DLGLA 340
           KPV+W PS  TALAEAE+EY E   + SIY  F ++       GL +  LP     + + 
Sbjct: 182 KPVYWCPSCETALAEAEIEYQEDR-TYSIYVKFEVI----DDKGLFSN-LPIGDKKVYIV 235

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTT WT+P N A+A+NA   Y++++I                  GN +       ++V
Sbjct: 236 IWTTTTWTLPGNLAIALNADFDYSLIDI------------------GNEI-------LVV 270

Query: 401 ASDLVPTLEAKWGTKLVIKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           AS+LV  +      K+     +A   G DLE  +  HP  +R   +VI G+++T E+GTG
Sbjct: 271 ASELVERVMKT--NKIEQYHEIARFKGKDLEYVKCKHPFLDRT-SLVILGEHVTLEAGTG 327

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
            VHTAPGHG+ED+    KY +P++ PVD++G  T+EAGKF+GL    D N  + K L+  
Sbjct: 328 CVHTAPGHGEEDFEVCQKYNIPVIVPVDNKGYLTKEAGKFAGL-FYEDSNKEIAKELENS 386

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +L+  E   H+YP+ WR K P IFRATEQWFASV+GFR+ A+ A+  VKWVP
Sbjct: 387 GNLLGVEKITHQYPHCWRCKNPVIFRATEQWFASVKGFREEALKAVDSVKWVP 439



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 125/184 (67%), Gaps = 6/184 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           +GAD+LRLW  S DYT D+ I   +++Q+++IYRK+R T R+LLGNL+D+    + + Y+
Sbjct: 619 FGADILRLWCVSADYTTDMRISKDIIKQLTEIYRKIRNTARFLLGNLYDFNPKTDKVGYE 678

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  ID++AL +L  +++ + ++YE Y + +++ ++  F ++D+SN Y D+ KDRLY   
Sbjct: 679 NLKEIDKWALQRLYTLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASK 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
           + S  RR+ QTV+   L+++ ++IAPIL   AE++WQN+  AY  E+    E VF + WP
Sbjct: 739 SESLDRRAAQTVMYEILVALTKLIAPILSFTAEEIWQNI--AYKEEN---VESVFLTSWP 793

Query: 756 VLDE 759
            ++E
Sbjct: 794 KVNE 797


>gi|229140544|ref|ZP_04269099.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228643105|gb|EEK99381.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 913

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 211/464 (45%), Positives = 289/464 (62%), Gaps = 45/464 (9%)

Query: 112 LPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGNLHMGHA 170
           +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG++HMGHA
Sbjct: 1   MPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHA 60

Query: 171 LNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPSKLRAKA 228
           LNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T ++ R   
Sbjct: 61  LNKVLKDFIVRYKSMTGFCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTVAEFRKLC 116

Query: 229 AKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVH 288
           A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+
Sbjct: 117 AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVY 176

Query: 289 WSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWT 348
           WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +WTTTPWT
Sbjct: 177 WSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWT 228

Query: 349 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 408
           +PAN  ++V+ +L+YA+V++     G+                       I+AS+L  T+
Sbjct: 229 LPANLGISVHPELEYAIVKVN----GEK---------------------YIIASELFETV 263

Query: 409 EA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHG 466
               +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG
Sbjct: 264 AKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHG 321

Query: 467 QEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPY 526
           ++D++   KYGL +L PVDD+G  TEEA  F GL      N  + + L+E  +L+     
Sbjct: 322 EDDFIVGKKYGLEVLCPVDDKGVLTEEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFI 380

Query: 527 EHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 381 THSYPHDWRTKKPIIFRATAQWFASIEAFRKELLEAVAETKWVP 424



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 589 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 647

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 648 NLDDFKPSENTVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 707

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 708 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 762


>gi|418993809|ref|ZP_13541446.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG290]
 gi|377746968|gb|EHT70938.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG290]
          Length = 917

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/459 (45%), Positives = 280/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R   +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRDS-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/233 (40%), Positives = 134/233 (57%), Gaps = 8/233 (3%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R   P  F  +  +F   EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGVSPYKFLLSHGFFMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVK 653
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +SI   +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTA 690

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILV 750

Query: 714 SIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF--VFESKWPVLDEKWRTF 764
            + +++APIL H AE+VW + P     E    A+   V E    +L+ KWRTF
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLADMPKVVEVDQALLN-KWRTF 801


>gi|424994832|ref|ZP_18406751.1| isoleucine--tRNA ligase [Enterococcus faecium ERV168]
 gi|402978930|gb|EJX94631.1| isoleucine--tRNA ligase [Enterococcus faecium ERV168]
          Length = 937

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/469 (44%), Positives = 296/469 (63%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++++++ +  + N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENRIYQKRQELNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +         +L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++++ G   + + K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|417891673|ref|ZP_12535730.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21200]
 gi|341850959|gb|EGS91888.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21200]
          Length = 917

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/459 (44%), Positives = 282/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVDS---DAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        QK +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVDG----------------------QKYIVAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K  +G +LE     HP  +R+  +VI G+++TT++GTG VHTAPG
Sbjct: 271 VAEALGWDKDSIKLEKEFSGKELEYVVAQHPFLDRKS-LVINGEHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   R+  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRKDILDAI 427



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|430826929|ref|ZP_19445097.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0164]
 gi|431765943|ref|ZP_19554442.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4215]
 gi|430444475|gb|ELA54313.1| isoleucyl-tRNA synthetase [Enterococcus faecium E0164]
 gi|430627386|gb|ELB63888.1| isoleucyl-tRNA synthetase [Enterococcus faecium E4215]
          Length = 932

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/469 (44%), Positives = 296/469 (63%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++++++ +  + N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNRECEWQKEWEENRIYQKRQELNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +         +L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++++ G   + + K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|228909722|ref|ZP_04073545.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228850011|gb|EEM94842.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 913

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 211/464 (45%), Positives = 289/464 (62%), Gaps = 45/464 (9%)

Query: 112 LPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGNLHMGHA 170
           +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG++HMGHA
Sbjct: 1   MPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHA 60

Query: 171 LNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPSKLRAKA 228
           LNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T ++ R   
Sbjct: 61  LNKVLKDFIVRYKSMAGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTVAEFRKLC 116

Query: 229 AKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVH 288
           A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+
Sbjct: 117 AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVY 176

Query: 289 WSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWT 348
           WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +WTTTPWT
Sbjct: 177 WSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWT 228

Query: 349 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 408
           +PAN  ++V+ +L+Y++V++                       D+K    I+AS+L  T+
Sbjct: 229 LPANLGISVHPELEYSIVKVN----------------------DEK---YIIASELFETV 263

Query: 409 EA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHG 466
               +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG
Sbjct: 264 AKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHG 321

Query: 467 QEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPY 526
           ++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +L+     
Sbjct: 322 EDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFI 380

Query: 527 EHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 381 THSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 424



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 589 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 647

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 648 NLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 707

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 708 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 762


>gi|431536451|ref|ZP_19517411.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1731]
 gi|430594938|gb|ELB32890.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1731]
          Length = 932

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 296/469 (63%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++++++ +  + N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENRIYQKRQELNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +         +L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++++ G   + + K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SP+D +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPIDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|387780303|ref|YP_005755101.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           LGA251]
 gi|344177405|emb|CCC87872.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           LGA251]
          Length = 917

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 211/461 (45%), Positives = 284/461 (61%), Gaps = 39/461 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIK--KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           V   EA    K+ IK  K   G +LE     HP  +R+  +VI GD++TT++GTG VHTA
Sbjct: 271 VA--EALDWDKVSIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+ 
Sbjct: 328 PGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLK 386

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
            +   H YP+DWRTKKP IFRAT QWFAS+   RQ  ++AI
Sbjct: 387 LDFITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILEAI 427



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +S+   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSVPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|312135165|ref|YP_004002503.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775216|gb|ADQ04703.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 920

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 211/470 (44%), Positives = 301/470 (64%), Gaps = 38/470 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +  T++LPKT F MRAN   REP+  K W ++ +F ++ +KN + + F+LHDGPPYANG+
Sbjct: 3   WSQTLNLPKTDFPMRANLAQREPQFLKFWYENDIFKKMLEKNKNNKKFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK+LKDI+N+YK LQ Y   Y+PGWD HGLPIE +V++ L  + + ++ P + 
Sbjct: 63  IHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQVIKKLGVN-RHEVEPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA + +  Q   FKR GV+ +W NPY+TLDP++EA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKKCKEFALSYIDIQRQQFKRLGVFGEWENPYMTLDPKFEARQIRVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL-LNEFLPDLGLAVWT 343
           KPV+W PS  TALAEAE+EY E   + SIY  F ++      S L + +    + + +WT
Sbjct: 182 KPVYWCPSCETALAEAEIEYQEDR-TYSIYVKFEVIDDKRLFSNLPIGD--KKVYIVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TT WT+P N A+A+NA   Y++++I                  GN +       ++VAS+
Sbjct: 239 TTTWTLPGNLAIALNADFDYSLIDI------------------GNEI-------LVVASE 273

Query: 404 LVPTLEAKWGTKLVIKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           LV  +      K+     +A   G DLE  +  HP  +R   +VI G+++T E+GTG VH
Sbjct: 274 LVERVMKT--NKIEQYHEIARFKGKDLEYVKCKHPFLDRT-SLVILGEHVTLEAGTGCVH 330

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG+ED+    KY +P++ PVD++G  T+EAGKF+GL    D N  + K L+   +L
Sbjct: 331 TAPGHGEEDFEVCQKYNIPVIVPVDNKGYLTKEAGKFAGL-FYEDSNKEIAKELENSGNL 389

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +  E   H+YP+ WR K P IFRATEQWFASV+GFR+ A+ A+  VKWVP
Sbjct: 390 LGVEKITHQYPHCWRCKNPVIFRATEQWFASVKGFREEALKAVDSVKWVP 439



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 124/184 (67%), Gaps = 6/184 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           +GAD+LRLW  S DYT D+ I   +++Q+++IYRK+R T R+LLGNL D+    + + Y+
Sbjct: 619 FGADILRLWCVSADYTTDMRISKDIIKQLTEIYRKIRNTARFLLGNLFDFNPKTDKVGYE 678

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  ID++AL +L  +++ + ++YE Y + +++ ++  F ++D+SN Y D+ KDRLY   
Sbjct: 679 NLKEIDKWALQRLYTLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASK 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
           + S  RR+ QTV+   L+++ ++IAPIL   AE++WQN+  AY  E+    E VF + WP
Sbjct: 739 SESLDRRAAQTVMYEILVALTKLIAPILSFTAEEIWQNI--AYKEEN---VESVFLTSWP 793

Query: 756 VLDE 759
            ++E
Sbjct: 794 KVNE 797


>gi|229071395|ref|ZP_04204617.1| Isoleucyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228711686|gb|EEL63639.1| Isoleucyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 913

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 211/464 (45%), Positives = 289/464 (62%), Gaps = 45/464 (9%)

Query: 112 LPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGNLHMGHA 170
           +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG++HMGHA
Sbjct: 1   MPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHA 60

Query: 171 LNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPSKLRAKA 228
           LNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T ++ R   
Sbjct: 61  LNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTVAEFRKLC 116

Query: 229 AKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVH 288
           A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+
Sbjct: 117 AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVY 176

Query: 289 WSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWT 348
           WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +WTTTPWT
Sbjct: 177 WSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWT 228

Query: 349 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 408
           +PAN  ++V+ +L+Y++V++                       D+K    I+AS+L  T+
Sbjct: 229 LPANLGISVHPELEYSIVKVN----------------------DEK---YIIASELFETV 263

Query: 409 EA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHG 466
               +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG
Sbjct: 264 AKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHG 321

Query: 467 QEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPY 526
           ++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +L+     
Sbjct: 322 EDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFI 380

Query: 527 EHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 381 THSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 424



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 589 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 647

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 648 NLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 707

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 708 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 762


>gi|325845145|ref|ZP_08168454.1| isoleucine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325488810|gb|EGC91210.1| isoleucine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 911

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 212/467 (45%), Positives = 287/467 (61%), Gaps = 40/467 (8%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGNL 165
           K T+ +PKT F MR N   REP+I + W D +++ +V +KN D   FVLHDGPPYANGN+
Sbjct: 4   KETLLMPKTDFPMRGNLPNREPQIEQSWYDEKLYEKVLEKNQDKTPFVLHDGPPYANGNI 63

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNKILKD + R+K +  Y   Y+PGWD HGLPIE + L +  +  +K+ T ++ R
Sbjct: 64  HMGHALNKILKDFVVRFKNMDGYYAPYIPGWDTHGLPIE-QALTNNKKVNRKEKTVAEFR 122

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
               ++A   V+ Q   FKR GV  DW+NPY+TL  EYEA QI VFG+M  +G IY+G K
Sbjct: 123 ELCKEYALEQVEGQKTQFKRLGVLGDWDNPYITLQKEYEAQQILVFGKMVKEGLIYKGLK 182

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           P++WSPSS TALAEAE+EY +   S SIY  F++       +G       D    +WTTT
Sbjct: 183 PIYWSPSSETALAEAEIEYHDKK-SPSIYVAFKVQDGKGILAG-------DEEFVIWTTT 234

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN  + VNA L+Y  V +                       D+K    IVA +LV
Sbjct: 235 PWTIPANLGICVNADLEYVTVAVN----------------------DRK---FIVAKELV 269

Query: 406 PTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
            +L  E  W T  ++  T  GSD E     HP+ +R+  ++I GD++T ++GTGLVHTAP
Sbjct: 270 ESLSKEVNWETYEIL-ATYKGSDFEYMTAKHPLFDRES-LLILGDHVTLDAGTGLVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D+    KY L +L PVD  G  T++A +F G+    D N AV + L+E+ +L+  
Sbjct: 328 GHGEDDFNAGRKYNLEVLCPVDYRGYMTKDAFEFEGM-YYEDANKAVGQKLEEKGALLGL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +   H YP+DWRTKKP IFRATEQWFAS+E  +   M+ I +V W+P
Sbjct: 387 KFITHSYPHDWRTKKPIIFRATEQWFASIEALKGQMMEQIKEVNWLP 433



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 107/160 (66%), Gaps = 1/160 (0%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD++RLWV+SVDY  DV I   +++Q+++ YRK+R T R+LLGNL D+    + ++Y+
Sbjct: 611 YGADIVRLWVASVDYQADVRISEDLIKQVAESYRKMRNTFRFLLGNLFDFNPETDLVAYE 670

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           DL  +DQ+ + +L  + K ++ +YE Y+F  +F+ +  +I  DLS FY D  KD LY   
Sbjct: 671 DLNEVDQFMMIRLNELTKELKSAYEEYRFDDVFKTVNNYISNDLSAFYLDFTKDILYIEK 730

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
             S  RRS QT+L  H+  + R++AP++PH A++V+  +P
Sbjct: 731 ADSQARRSIQTILYHHVYDMCRLLAPVIPHTADEVYSYIP 770


>gi|392957453|ref|ZP_10322976.1| isoleucyl-tRNA ligase [Bacillus macauensis ZFHKF-1]
 gi|391876416|gb|EIT85013.1| isoleucyl-tRNA ligase [Bacillus macauensis ZFHKF-1]
          Length = 918

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/468 (44%), Positives = 287/468 (61%), Gaps = 40/468 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REP+I + W++  ++ +V +   G   F+LHDGPPYANG+
Sbjct: 3   YKDTLLMPKTEFPMRGNLPQREPDIQQKWEELNIYEKVQNHTKGRPTFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA NKILKD+I RYK +  +   YVPGWD HGLPIE  + +S  +  +K+++ ++ 
Sbjct: 63  IHVGHAENKILKDMIVRYKSMAGFHAPYVPGWDTHGLPIETALTKS-GKVKRKEMSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  ++A   V  Q   FKR GV  DW NPY+TLD  +EA QIEVFG+M  +GYIY+G 
Sbjct: 122 RKRCEEYALTQVDRQRTQFKRLGVRGDWENPYITLDKSFEARQIEVFGEMVKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L E   D+ + +WTT
Sbjct: 182 KPVYWSPSSESALAEAEIEYHDKR-SASIYVAFPVKEG----KGVLQE---DVSIVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L Y VV              N   R            ++VA  L
Sbjct: 234 TPWTIPANLGISVHPDLDYVVV--------------NADGRK-----------LLVAEAL 268

Query: 405 VPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           V TL  E +W    V+ + + G +LE+    HP+  R   V++ GD++TT++GTG VHTA
Sbjct: 269 VETLTKELEWKDVSVVAQ-MKGQELEHIVASHPLYERDSLVML-GDHVTTDAGTGCVHTA 326

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   +YGL +L PVDD G  T+EA  F GL    + N  + + L E  +L+ 
Sbjct: 327 PGHGEDDFLVGKRYGLDVLCPVDDRGVMTKEAPGFEGL-FYDEANKPITEQLTEAGALLK 385

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                H YP+DWRTKKP IFRAT QWFAS++G R   + AI  VKW+P
Sbjct: 386 LSFITHSYPHDWRTKKPVIFRATAQWFASIKGMRDDILQAIADVKWIP 433



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 82/197 (41%), Positives = 123/197 (62%), Gaps = 17/197 (8%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVDY  DV +   +L+Q++++YRK+R TLR+LLGNLH +    +S+SY++
Sbjct: 613 GADILRLWVSSVDYQADVRVSDDILKQVAEVYRKIRNTLRFLLGNLHGFDPAKHSVSYEN 672

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY + +L  ++  ++ +Y+ YQF  ++  I  F  +DLS+FY D+AKD LY    
Sbjct: 673 LGELDQYMIVKLNKLIDRVKTAYDEYQFLSVYTAIHTFCTIDLSSFYMDIAKDTLYIQAE 732

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 756
               RR+ QTVL   L++I +++APIL H +++VWQ++P       G   E V  S  PV
Sbjct: 733 DDPKRRNIQTVLYQALVAITKLVAPILAHTSDEVWQHIP-------GVEEESVQLSNLPV 785

Query: 757 ---------LDEKWRTF 764
                    L +KW  F
Sbjct: 786 AVSYDGEEALLQKWDVF 802


>gi|260892906|ref|YP_003239003.1| isoleucyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865047|gb|ACX52153.1| isoleucyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 916

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/467 (44%), Positives = 281/467 (60%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           +  T++LPKT F MRAN   REPEI + W++  ++  V  K  G   F+LHDGPPYANG+
Sbjct: 3   WSKTLNLPKTDFPMRANLPQREPEILRFWEEIDLYRLVQQKTAGRPKFILHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH LNK+LKDII +Y+ +  Y   Y+PGWD HGLPIE +V++SL  D +K + P + 
Sbjct: 63  IHLGHVLNKVLKDIIIKYRSMSGYDAPYIPGWDTHGLPIEQQVIKSLGLDRRK-VGPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  ++A   V+ Q   FKR GV ADW +PYLTL P YEA QIEVFG+M+ +GYIYRG 
Sbjct: 122 RRRCKEYALRFVEIQRQEFKRLGVRADWEHPYLTLMPFYEARQIEVFGEMAKRGYIYRGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           +PV+W P+  TALAEAE+EY     S SIY  FR+        GLL     D    +WTT
Sbjct: 182 RPVYWCPTCETALAEAEIEYAPKE-SPSIYVRFRVKDG----KGLLPS---DAAFVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN AV ++  L Y +V +                          K  ++VA  L
Sbjct: 234 TPWTLPANVAVCLHPDLDYVLVRV-------------------------GKERLVVAEAL 268

Query: 405 VPT-LEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           +P+ LE     K  I+    G +LE     HP   R   VV+   Y++ E GTG VH AP
Sbjct: 269 LPSFLEVLGVEKGEIEARFKGKELEGVVLEHPFFERDSLVVV-DTYVSAEQGTGCVHNAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED++T  +Y LP++SPVD  G FTEE G F+G   L + N  ++  L  + +L+  
Sbjct: 328 GHGEEDFITCRRYNLPVISPVDGRGYFTEEGGPFAGKFYL-EANEDIMAELRRRGALLAA 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H+YP+ WR K P  FRATEQWFAS++GFR+ A+ AI  V+W+P
Sbjct: 387 GRITHQYPHCWRCKNPVFFRATEQWFASIDGFREQALKAIRSVRWIP 433



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 93/147 (63%), Gaps = 3/147 (2%)

Query: 562 AIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 620
           ++G V  V PQE     GAD+LRLWV S DY GD+     +LRQ+++ YRK+R T R+LL
Sbjct: 602 SLGNV--VDPQEVMTKLGADILRLWVCSADYRGDLAASDNILRQVAEAYRKIRNTFRFLL 659

Query: 621 GNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
            NL+D+    ++ Y+ L  +D+Y L +LE + + + ++YE Y+F  ++  I  F +VDLS
Sbjct: 660 ANLYDFDPAEALPYEQLLELDRYLLMRLEEVKRRVLKAYEEYEFHLVYHSIYSFCVVDLS 719

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTV 707
            FY +V KDRLY     +  RR+ QTV
Sbjct: 720 AFYLNVIKDRLYCSLPYARERRAAQTV 746


>gi|293376235|ref|ZP_06622478.1| isoleucine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292645127|gb|EFF63194.1| isoleucine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 911

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 212/467 (45%), Positives = 287/467 (61%), Gaps = 40/467 (8%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGNL 165
           K T+ +PKT F MR N   REP+I + W D +++ +V +KN D   FVLHDGPPYANGN+
Sbjct: 4   KETLLMPKTDFPMRGNLPNREPQIEQTWYDEKLYEKVLEKNQDKTPFVLHDGPPYANGNI 63

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNKILKD + R+K +  Y   Y+PGWD HGLPIE + L +  +  +K+ T ++ R
Sbjct: 64  HMGHALNKILKDFVVRFKNMDGYYAPYIPGWDTHGLPIE-QALTNNKKVNRKEKTVAEFR 122

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
               ++A   V+ Q   FKR GV  DW+NPY+TL  EYEA QI VFG+M  +G IY+G K
Sbjct: 123 ELCKEYALEQVEGQKTQFKRLGVLGDWDNPYITLQKEYEAQQILVFGKMVKEGLIYKGLK 182

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           P++WSPSS TALAEAE+EY +   S SIY  F++       +G       D    +WTTT
Sbjct: 183 PIYWSPSSETALAEAEIEYHDKK-SPSIYVAFKVQDGKGILAG-------DEEFVIWTTT 234

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN  + VNA L+Y  V +                       D+K    IVA +LV
Sbjct: 235 PWTIPANLGICVNADLEYVTVAVN----------------------DRK---FIVAKELV 269

Query: 406 PTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
            +L  E  W T  ++  T  GSD E     HP+ +R+  ++I GD++T ++GTGLVHTAP
Sbjct: 270 ESLSKELNWETYEIL-ATYKGSDFEYMTAKHPLFDRES-LLILGDHVTLDAGTGLVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D+    KY L +L PVD  G  T++A +F G+    D N AV + L+E+ +L+  
Sbjct: 328 GHGEDDFNAGRKYNLEVLCPVDYRGYMTKDAFEFEGM-YYEDANKAVGQKLEEKGALLGL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +   H YP+DWRTKKP IFRATEQWFAS+E  +   M+ I +V W+P
Sbjct: 387 KFITHSYPHDWRTKKPIIFRATEQWFASIEALKGQMMEQIKEVNWLP 433



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 107/160 (66%), Gaps = 1/160 (0%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD++RLWV+SVDY  DV I   +++Q+++ YRK+R T R+LLGNL D+    + ++Y+
Sbjct: 611 YGADIVRLWVASVDYQADVRISEDLIKQVAESYRKMRNTFRFLLGNLFDFNPETDLVAYE 670

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           DL  +DQ+ + +L  + K ++ +YE Y+F  +F+ +  +I  DLS FY D  KD LY   
Sbjct: 671 DLNEVDQFMMIRLNELTKELKSAYEEYRFDDVFKTVNNYISNDLSAFYLDFTKDILYIEK 730

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
             S  RRS QTVL  H+  + R++AP++PH A++V+  +P
Sbjct: 731 ADSQARRSIQTVLYHHVYDMCRLLAPVIPHTADEVYSYIP 770


>gi|228960113|ref|ZP_04121777.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228799629|gb|EEM46582.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 913

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 211/464 (45%), Positives = 289/464 (62%), Gaps = 45/464 (9%)

Query: 112 LPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGNLHMGHA 170
           +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG++HMGHA
Sbjct: 1   MPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANGDIHMGHA 60

Query: 171 LNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPSKLRAKA 228
           LNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T ++ R   
Sbjct: 61  LNKVLKDFIVRYKSMTGFSAPYVPGWDTHGLPIE----QALTNKGVKRKEMTVAEFRKLC 116

Query: 229 AKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVH 288
           A++A   V+ Q   FKR GV ADW+NPY+TL+P YEA QI+VFG M+ +GYIY+G+KPV+
Sbjct: 117 AEYAYEQVERQREQFKRLGVRADWDNPYITLEPAYEAQQIKVFGDMAKKGYIYKGQKPVY 176

Query: 289 WSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWT 348
           WSP+S +ALAEAE+EY +   S SIY  F      P   G  N    D    +WTTTPWT
Sbjct: 177 WSPTSESALAEAEIEYQDKK-SASIYVAF------PVKDG-KNVLEGDEKYIIWTTTPWT 228

Query: 349 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 408
           +PAN  ++V+ +L+Y++V++                       D+K    I+AS+L  T+
Sbjct: 229 LPANLGISVHPELEYSIVKVN----------------------DEK---YIIASELFETV 263

Query: 409 EA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHG 466
               +W    V+ KT+ GS+LE     HP  +R   V++ GD++TT++GTG VHTAPGHG
Sbjct: 264 AKTLEWENAEVV-KTVKGSELEYTVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAPGHG 321

Query: 467 QEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPY 526
           ++D+V   KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +L+     
Sbjct: 322 EDDFVVGKKYGLEVLCPVDDKGVLTNEAPGFEGL-FYDKANKPITEKLEEVGALLKLTFI 380

Query: 527 EHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            H YP+DWRTKKP IFRAT QWFAS+E FR+  ++A+ + KWVP
Sbjct: 381 THSYPHDWRTKKPIIFRATAQWFASIEAFRKELIEAVAETKWVP 424



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 589 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 647

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D++   N+++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 648 NLDDFKPSENAVAVAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 707

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY  G     RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 708 SFYLDFAKDILYIEGANHEDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYIP 762


>gi|299821567|ref|ZP_07053455.1| isoleucine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817232|gb|EFI84468.1| isoleucine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 929

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/470 (44%), Positives = 297/470 (63%), Gaps = 43/470 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR N  VRE E  K W+++ ++ R  + N+G+  F+LHDGPPYANGN
Sbjct: 12  YKETLLIPKTAFPMRGNLPVRELEWQKEWEENDIYARRQELNEGKPTFILHDGPPYANGN 71

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH+LNKI KDII RYK +  ++  YVPGWD HGLPIE +VL +     +K++T ++ 
Sbjct: 72  IHLGHSLNKISKDIIVRYKSMTGFRSPYVPGWDTHGLPIE-QVLANKGV-KRKEMTMAEY 129

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A + V  Q   FKR GV ADW NPY+TL PEYEAAQI VFG+M+ +GYIY+G 
Sbjct: 130 RKHCMEYALSQVDKQREDFKRLGVAADWENPYITLQPEYEAAQIRVFGKMAEKGYIYKGL 189

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-LAVWT 343
           KP++WSPSS ++LAEAE+EY +   S SIY  F++V           + LPD   L +WT
Sbjct: 190 KPIYWSPSSESSLAEAEIEYKDVK-SASIYVAFKVVDG--------KDVLPDDAELVIWT 240

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN +  Y+VV++                        ++K   ++A +
Sbjct: 241 TTPWTLPANLGISVNPEYTYSVVKV-----------------------GERK--FVIAKE 275

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W     +++ + G +LE     HP  +R   V+IG D++T ++GTGLVHT
Sbjct: 276 LLEQVAKEIGWEDYESLQE-VKGDELEYVTAQHPFYDRTSLVMIG-DHVTLDAGTGLVHT 333

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY    +Y L +LSPVD  G +T+EA  F G+      N  + + L+E+ +L+
Sbjct: 334 APGHGEDDYFIGKRYDLEVLSPVDSRGCYTDEAPGFEGI-FYDKANPMITELLEEKGALL 392

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
             + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 393 KLDFFTHSYPHDWRTKKPVIYRATAQWFASIDAFRQNILDEVEKVDWVIP 442



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 63/156 (40%), Positives = 102/156 (65%), Gaps = 1/156 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWV+SVDY  DV +    L Q++++YRKLR TLR+LL N+ D+    ++++++D
Sbjct: 621 GADILRLWVASVDYESDVRVDMNTLNQVAEVYRKLRNTLRFLLANVSDFDPKADTVAFED 680

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY   +L  ++ +IR+ Y++Y F  +++ I  F   +LS FY D AKD +Y    
Sbjct: 681 LRSVDQYMTVRLNQVIDSIRKGYDAYAFSSVYKTIVNFCTSELSAFYLDFAKDVVYIEPE 740

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQ 732
            S  RR  QTV     +++ +++ PILPH +E++W+
Sbjct: 741 NSHARRCMQTVFYQTAVALTKLLTPILPHTSEEIWK 776


>gi|70726723|ref|YP_253637.1| isoleucyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|84029567|sp|Q4L5P4.1|SYI_STAHJ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|68447447|dbj|BAE05031.1| Ile-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 916

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/463 (44%), Positives = 288/463 (62%), Gaps = 43/463 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + W+ +  + +  +KN G ++++LHDGPPYANGN
Sbjct: 3   YKDTLLMPKTDFPMRGGLPNKEPQIQEQWEANNQYQKALEKNKGNQSYILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKI+KDII RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKIIKDIIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSIAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   FKR GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFKRLGVRGDFNDPYITLKPEYEAAQIRLFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +      T G++++   D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDTKGVVDQ---DAQFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII---VA 401
           TPWT+P+N A+ V+  L+Y    +                          K +II   ++
Sbjct: 233 TPWTIPSNVAITVHPDLKYGQYNVNG------------------------KKYIIAQALS 268

Query: 402 SDLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
            D+   LE  W    + ++K   G +LE     HP  +R   +VI G+++TT++GTG VH
Sbjct: 269 EDVAEALE--WDKDAIQLEKEFTGKELEYVEAQHPFLDR-ISLVINGNHVTTDAGTGCVH 325

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L
Sbjct: 326 TAPGHGEDDYIVGQKYDLPVISPLDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKDAL 384

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
           +      H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 385 LKLNFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDILDAI 427



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 119/202 (58%), Gaps = 4/202 (1%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVK 653
           V I  ++L+Q SD+YRK+R TLR++LGN++D+      I   +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPDTDVIPEAELLEVDRYLLNRLREFTA 690

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           +  E Y+++ +  I+Q +Q FI V+LSNFY D  KD LY     +  RRS QTVL   L+
Sbjct: 691 STIEHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEEKNAHKRRSMQTVLYQILV 750

Query: 714 SIVRVIAPILPHLAEDVWQNLP 735
            + +++APIL H AE+VW + P
Sbjct: 751 DMTKLLAPILVHTAEEVWTHTP 772


>gi|222529340|ref|YP_002573222.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|254782359|sp|B9MRZ5.1|SYI_ANATD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|222456187|gb|ACM60449.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 920

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/473 (45%), Positives = 300/473 (63%), Gaps = 44/473 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +  T++LPKT F MRAN   REP+  K W ++ +F ++ +KN + + F+LHDGPPYANG+
Sbjct: 3   WSQTLNLPKTDFPMRANLAQREPQFLKFWQENDIFKKMLEKNKNNKKFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK+LKDI+N+YK LQ Y   Y+PGWD HGLPIE +V++ L E  + ++ P + 
Sbjct: 63  IHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQVIKKL-EVNRHEVDPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA + +  Q   FKR GV+ +W NPY+TLDP++EA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKKCKEFALSYIDIQRQQFKRLGVFGEWENPYMTLDPKFEARQIRVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP----DLGLA 340
           KPV+W PS  TALAEAE+EY E   + SIY  F ++       GL +  LP     + + 
Sbjct: 182 KPVYWCPSCETALAEAEIEYQEDR-TYSIYVKFEVI----DDKGLFSN-LPIGDKKVYIV 235

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTT WT+P N A+A+NA   Y++++I                  GN +       ++V
Sbjct: 236 IWTTTTWTLPGNLAIALNADFDYSLIDI------------------GNEI-------LVV 270

Query: 401 ASDLVPTLEAKWGTKLVIKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           AS+LV  +      K+   K +A   G DLE  +  HP  +R   +VI G+++T E+GTG
Sbjct: 271 ASELVERVMK--TNKIEQYKEIARFKGKDLEYVKCKHPFLDRT-SLVILGEHVTLEAGTG 327

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
            VHTAPGHG+ED+    +Y + ++ PVD++G  T+EAGKF+GL    D N  + K L+  
Sbjct: 328 CVHTAPGHGEEDFEVCQRYNIHVIVPVDNKGYLTKEAGKFAGL-FYEDSNKEIAKELEAS 386

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             L+  E   H+YP+ WR K P IFRATEQWFASV+GFR  A+ A+  VKWVP
Sbjct: 387 GHLLGVEKITHQYPHCWRCKNPVIFRATEQWFASVKGFRDQALKAVDDVKWVP 439



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 137/209 (65%), Gaps = 9/209 (4%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           +GAD+LRLW  S DYT D+ I   +++Q+++IYRK+R T R+LLGNL+D+    + + Y+
Sbjct: 619 FGADILRLWCVSADYTTDMRISKDIIKQLTEIYRKIRNTARFLLGNLYDFNPKTDKVGYE 678

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  ID++AL +L  +++ + ++YE Y + +++ ++  F ++D+SN Y D+ KDRLY   
Sbjct: 679 NLKEIDKWALQRLYKLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASK 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
           + S  RRS QTV+   L+++  +IAPIL   AE++WQN+ F    ED   AE VF ++WP
Sbjct: 739 SESLDRRSAQTVMYEILIALTILIAPILSFTAEEIWQNIIFKE--ED---AESVFLTRWP 793

Query: 756 VLDEK-WRTFPVGEIYFWGKILEVIVVVT 783
            ++E   R   + E   W KI+E+  +V+
Sbjct: 794 SINEDILRDEALREK--WDKIIEIKDIVS 820


>gi|257890202|ref|ZP_05669855.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257826562|gb|EEV53188.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
          Length = 930

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/467 (44%), Positives = 295/467 (63%), Gaps = 39/467 (8%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGNL 165
           K T+ L KT F MR N   RE E  K W++++++ +  + N+G+ +FVLHDGPPYANGN+
Sbjct: 2   KETLQLGKTKFPMRGNLPNREGEWQKEWEENRIYQKRQELNEGKPSFVLHDGPPYANGNI 61

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++  
Sbjct: 62  HLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAEYL 119

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            K  ++A + V  Q A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G K
Sbjct: 120 EKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKGLK 179

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           P++WSPSS ++LAEAE+EY +   S SI+  F +         +L+E   D    +WTTT
Sbjct: 180 PIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWTTT 231

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN  +AVN K  Y +VE                        D +K   +VA DL+
Sbjct: 232 PWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKDLL 266

Query: 406 PTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
            T++++ G   + + K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPG
Sbjct: 267 ETVQSEIGWENVTVLKEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTAPG 325

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  +
Sbjct: 326 HGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLD 384

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 385 FFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVEWVIP 431



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 602 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 661

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 662 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 721

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 722 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 768


>gi|418307414|ref|ZP_12919127.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21194]
 gi|365245681|gb|EHM86297.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21194]
          Length = 917

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/459 (44%), Positives = 279/459 (60%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +     +          D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDVKDDKGAVDS-------DAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        QK +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVDG----------------------QKYIVAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K  +G +LE     HP  +R+  +VI G+++TT++GTG VHTAPG
Sbjct: 271 VAEALGWDKDSIKLEKEFSGKELEYVVAQHPFLDRKS-LVINGEHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   R+  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRKDILDAI 427



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|217076920|ref|YP_002334636.1| isoleucyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|254782447|sp|B7IGT1.1|SYI_THEAB RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|217036773|gb|ACJ75295.1| isoleucyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 910

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 216/524 (41%), Positives = 304/524 (58%), Gaps = 59/524 (11%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP T F MRAN + +EPE+ K W +   +  V    +G+  FVLHDGPPYANGN
Sbjct: 3   YKETLNLPSTEFSMRANLVKKEPEMLKKWKEMDDYNLVLKSREGKPKFVLHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A NKILKDI+ RYK ++ Y   YVPGWD HGLPIE +V   + E  K +++P ++
Sbjct: 63  IHIGTATNKILKDIVIRYKTMRGYYAPYVPGWDTHGLPIEHRVSVEMGEKIK-EMSPVEI 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   FA   V  Q   FKR GV  DW+NPYLTLDP+YE   + +F  +   G +YRG 
Sbjct: 122 RQKCKDFALNFVNIQREQFKRLGVRGDWDNPYLTLDPKYETHILNIFKTLVKNGNVYRGN 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W P+ +TALAEAE+EY + H S SIY  F+++       G  N +     + +WTT
Sbjct: 182 KPVYWCPTCKTALAEAEVEYHD-HSSPSIYVKFKLI-------GEENTY-----VVIWTT 228

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+AV+ +  Y  +++    +G+                     + IVA  L
Sbjct: 229 TPWTLPANVAIAVHPEYDYVKIKV----DGE---------------------YWIVAEGL 263

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           +    A+      + +   G DLE  +  HP  +R+  +V+  DY+T E GTG VHTAPG
Sbjct: 264 LNKFAAETEINYEVVEKFKGKDLEYKKAKHPFIDRESLIVL-ADYVTLEDGTGCVHTAPG 322

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG EDY+T LKY LP+LSPV++EG FTEEAGK++GL +  D N  +++ L++  +LI  +
Sbjct: 323 HGAEDYLTGLKYNLPVLSPVNEEGIFTEEAGKYAGLKIW-DANKVIIEDLEKLGALIKTQ 381

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPP----------Q 572
             EH YP+ WR K P IFRAT QWF SV+    R+  ++ I +V+W P           +
Sbjct: 382 KIEHSYPHCWRCKNPIIFRATPQWFISVDKNNLREKVLEEIKKVEWHPKWGENRITAMVK 441

Query: 573 EAPGYGADVLRLWVSSV-----DYTGDVMIGPQVLRQMSDIYRK 611
           E P +     R+W + +      + G+V I  +V+     I  K
Sbjct: 442 ERPDWTISRQRVWGTPIPAIKCKHCGEVFIDEKVIDSFITIVEK 485



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 109/167 (65%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +    YGAD+LRLWVSS+D+  ++ +G  +++Q  ++Y+K+R TLR+LLGNL ++   
Sbjct: 601 PKEIVDKYGADILRLWVSSIDFFDNIRVGKNIIQQQVEVYKKIRNTLRFLLGNLSNFTKN 660

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
           + + +D L  +D++AL +L+ ++  + E YE Y+F K++ +I R+  V+LS  Y D+ KD
Sbjct: 661 DLVEFDKLLPLDKWALGRLQEVISQVTEHYEKYEFSKVYSLINRYCTVELSATYLDILKD 720

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           RLY     S  RRS QTV+   L ++++++AP+L    E+ +Q  P 
Sbjct: 721 RLYVEAKDSIYRRSAQTVMFYILDALIKMLAPVLVFTTEEAYQLSPL 767


>gi|421074252|ref|ZP_15535292.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans JBW45]
 gi|392527758|gb|EIW50844.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans JBW45]
          Length = 928

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/475 (44%), Positives = 292/475 (61%), Gaps = 35/475 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           Y  T++LP+T F MR N   REPE+   W   +++ +   + +   F+LHDGPPYANG++
Sbjct: 3   YSKTLNLPQTEFPMRGNLPEREPEMLNYWKQQKIYEKRTTQVEKPKFILHDGPPYANGDI 62

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKD+I +YK L+ +   YVPGWD HGLPIE   ++ L  + + +L P  LR
Sbjct: 63  HIGHALNKILKDMILKYKSLRGFNTPYVPGWDTHGLPIEHAAIKILGLN-RHELKPLDLR 121

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            +   +A   V  Q   FKR G+ ADW+NPY+TL P YEA QIEVFG+M+ +G+IY+G K
Sbjct: 122 RECKDYALKFVDTQRQDFKRLGIGADWDNPYVTLRPAYEAKQIEVFGEMAKKGHIYKGLK 181

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
            V+W  S  TALAEAE+EY E   S +IY  F +V    +    +N    ++   +WTTT
Sbjct: 182 SVYWCTSCETALAEAEIEYAEKK-SHTIYVKFPLVDDKGTLPVGINA--ENVYGVIWTTT 238

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN A+AV+ +L+YA VE Q                 G +     ++   VA D  
Sbjct: 239 PWTMPANVAIAVHPELEYAWVESQ-----------------GEIYLLAVELIDAVAKD-- 279

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             LE+       I  TL G+DLE   + HP   R+  +V+  DY+T E GTG VHTAPGH
Sbjct: 280 NKLES-----YTILSTLKGADLEGVVFSHPFIERESIIVLA-DYVTLEQGTGCVHTAPGH 333

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           G +D+ T +++GLP+++PVD  G+FT E G F G+ ++ D +V V+K L  +  L+ +  
Sbjct: 334 GPDDFETGIRHGLPVINPVDHAGRFTAEGGIFEGM-LIHDADVPVIKELAARDMLLGKGK 392

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGAD 580
            +H+Y + WR K P I+RATEQWFASV+GFR+ A+ AI  VKW+     PG+G D
Sbjct: 393 IKHQYAHCWRCKNPVIYRATEQWFASVDGFREQALQAIKDVKWI-----PGWGED 442



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 136/212 (64%), Gaps = 9/212 (4%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    ++G V  + PQ+    YGAD+LRLWV+S DY  DV +   +L+Q+S++YR
Sbjct: 593 VDGDGRKMSKSVGNV--IFPQDVIKKYGADILRLWVASADYQADVRVSNDILKQLSEVYR 650

Query: 611 KLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T RY+LG++HD+    + + Y++L  ID++AL +LE + + + ++YE Y+F  I+ 
Sbjct: 651 KIRNTFRYILGSIHDFNPDTDKVGYNELLEIDRWALLRLEQVREKVTKAYEEYEFHLIYH 710

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  VDLS+ Y D+ KDR+YT    S  RR+ QTV+   + ++VR+I+P+L   AE+
Sbjct: 711 TVHNFCTVDLSSIYLDILKDRVYTALPASRERRAAQTVMYEIVNTLVRLISPVLTFTAEE 770

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKW 761
           VWQ++      ++ +  E V  + WP++ +++
Sbjct: 771 VWQHMK-----QEQNMPESVQLADWPMVHDEY 797


>gi|417796573|ref|ZP_12443781.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21305]
 gi|334268563|gb|EGL86997.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21305]
          Length = 917

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/459 (44%), Positives = 280/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G  TEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVLTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWV+S DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVTSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|403234872|ref|ZP_10913458.1| isoleucyl-tRNA ligase [Bacillus sp. 10403023]
          Length = 922

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/467 (43%), Positives = 284/467 (60%), Gaps = 36/467 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK T+ +PKT F MR N   REP+I + W+   ++ +V ++  G   FVLHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNREPQIQEQWEQMNIYQKVQERTKGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKI+KD+I R+K +  +   YVPGWD HGLPIE  + ++   + +K ++ ++
Sbjct: 62  DIHMGHALNKIIKDMIVRFKSMNGFCAPYVPGWDTHGLPIETALTKNKKVN-RKAMSVAE 120

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   +  Q   FKR GV  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 121 FRKLCEEYAYEQINNQREQFKRLGVRGDWENPYITLKPEYEAQQIKVFGEMAKKGYIYKG 180

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G       D  + +WT
Sbjct: 181 LKPVYWSPSSESALAEAEIEYQDKR-SASIYVAFPVKDGKGVLEG-------DEKIIIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++V+  L+Y+VV++                       D  K  +  A  
Sbjct: 233 TTPWTIPANLGISVHPDLEYSVVKV-----------------------DDTKYVLASALL 269

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
                E  W   + I KT  G +LEN    HP+  R   V++ G+++TT++GTG VHTAP
Sbjct: 270 EAAAKEIGW-EDVTIVKTFKGRELENVVAAHPIYGRDSLVML-GEHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYG+ +L PVD++G  T EA  F GL    + N  + + L+E  +L+  
Sbjct: 328 GHGEDDFIVGQKYGIGVLCPVDEKGYMTAEAEGFEGL-FYDEANKPITEKLNEVGALLKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H YP+DWRTKKPTIFRAT QWFAS++ FR   M+A+ + KWVP
Sbjct: 387 SFITHSYPHDWRTKKPTIFRATAQWFASIKDFRNELMEAVKETKWVP 433



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 120/185 (64%), Gaps = 2/185 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    +IG V  VP +     GAD+LRLWV+SVDY  DV +   +L+Q++++YR
Sbjct: 587 ALDGEGRKMSKSIGNVV-VPAKVMKQLGADILRLWVASVDYQSDVRVSDAILKQVAEVYR 645

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+LLGNL+D+    +++  ++L  +D+Y L +L  ++  ++ SYE+Y+F  ++ 
Sbjct: 646 KIRNTFRFLLGNLNDFNPETDAVPVNELREVDRYILVKLNKLIDKVKTSYENYEFAGVYH 705

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  ++LS+FY D AKD LY        RRS QTVL   LLS+ +++ PILPH A++
Sbjct: 706 SVHNFCTIELSSFYLDFAKDILYIEAENQHDRRSIQTVLYEALLSLTKLVTPILPHTADE 765

Query: 730 VWQNL 734
           VW ++
Sbjct: 766 VWSHI 770


>gi|392867100|gb|EAS29707.2| isoleucine-tRNA ligase [Coccidioides immitis RS]
          Length = 1012

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 216/476 (45%), Positives = 285/476 (59%), Gaps = 40/476 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R  A  +   + +  DD   + R     D   FVLHDGPPYANG+L
Sbjct: 12  WSSTLKLPKSTFPARIAAAEQAKYLQRCTDDLYAWQRRQRPADSAQFVLHDGPPYANGDL 71

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDII R +L +  +V Y+PGWDCHGLPIELK L S ++   KDL P+ +R
Sbjct: 72  HIGHALNKILKDIICRVQLAKGKRVEYIPGWDCHGLPIELKALNSKNQ-VGKDLGPANIR 130

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
           A A + A+ TV  QM  F+ +GV  DW N + T+D E+E  Q+EVF +M  +G IYR  K
Sbjct: 131 AIARQLAEETVVKQMKGFREWGVMGDWENYWKTMDKEFEMRQLEVFLEMVDKGLIYRRYK 190

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAP------PSTSGLLNEFLPDLGL 339
           PV+WSPS+RTALAEAELEY + HVS +    F + + P      P  SG       ++  
Sbjct: 191 PVYWSPSTRTALAEAELEYRDDHVSHAALVKFPLATVPTEIREHPLASG------DEIYA 244

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PANAA+AV+  L Y +V  QS   G      +++     +L++  KV + 
Sbjct: 245 VIWTTTPWTLPANAAIAVSKDLNYIIV--QSERHGKLLIAESRREYVEQLLEESLKVLMS 302

Query: 400 VASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           VA           GT L+             R +    +  C  VI  D++T ESG+GLV
Sbjct: 303 VA-----------GTSLLSS---------TYRPLFKDTDGSCQPVIAADFVTDESGSGLV 342

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYL 514
           H APGHG EDY   L++GL   +PVD EG+FT+ A        SG  VL +GN AVVKYL
Sbjct: 343 HCAPGHGMEDYEVCLEHGLSASAPVDGEGRFTDAAMPSSPSMLSGKHVLNEGNKAVVKYL 402

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +E+  L+ +  Y+HKYPYDWR+K P I RATEQWFA V   RQ A+ A+  V++VP
Sbjct: 403 EEEGRLLHKHKYKHKYPYDWRSKLPVIIRATEQWFADVGDIRQQAVSALLNVRFVP 458



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 94/168 (55%), Gaps = 9/168 (5%)

Query: 574 APGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGN 630
           AP Y   G D LRLWV+  DYT DV+IG  +L+  +    K R T R +LG L D+   N
Sbjct: 665 APVYDALGPDALRLWVAGSDYTKDVVIGQPILKATNGSLHKYRVTFRLILGALQDFDPKN 724

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            I Y+ L   D+ AL QL ++V   +E++ + +FFK    I R+   D S FY +  KDR
Sbjct: 725 QIPYESLRATDKIALSQLRSLVLACQEAFSNLEFFKAVTAINRWANADFSAFYIESIKDR 784

Query: 691 LYTGGTTSFTRRSCQTV---LSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           LY   T   +RR+ QT    + +HL SI   + P++P L E+ W++ P
Sbjct: 785 LYADSTDGLSRRAAQTTIFHIYSHLQSI---LGPLVPLLVEESWEHTP 829


>gi|419759413|ref|ZP_14285714.1| isoleucyl-tRNA synthetase [Thermosipho africanus H17ap60334]
 gi|407515626|gb|EKF50364.1| isoleucyl-tRNA synthetase [Thermosipho africanus H17ap60334]
          Length = 910

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 216/524 (41%), Positives = 304/524 (58%), Gaps = 59/524 (11%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP T F MRAN + +EPE+ K W +   +  V    +G+  FVLHDGPPYANGN
Sbjct: 3   YKETLNLPSTEFSMRANLVKKEPEMLKKWKEMDDYNLVLKSREGKPKFVLHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A NKILKDI+ RYK ++ Y   YVPGWD HGLPIE +V   + E  K +++P ++
Sbjct: 63  IHIGTATNKILKDIVIRYKTMRGYYAPYVPGWDTHGLPIEHRVSVEMGEKIK-EMSPVEI 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   FA   V  Q   FKR GV  DW+NPYLTLDP+YE   + +F  +   G +YRG 
Sbjct: 122 RQKCKDFALNFVNIQREQFKRLGVRGDWDNPYLTLDPKYETHILNIFKTLVKNGNVYRGN 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W P+ +TALAEAE+EY + H S SIY  F+++       G  N +     + +WTT
Sbjct: 182 KPVYWCPTCKTALAEAEVEYHD-HSSPSIYVKFKLI-------GEENTY-----VVIWTT 228

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+AV+ +  Y  +++    +G+                     + IVA  L
Sbjct: 229 TPWTLPANVAIAVHPEYDYVKIKV----DGE---------------------YWIVAEGL 263

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           +    A+      + +   G DLE  +  HP  +R+  +V+  DY+T E GTG VHTAPG
Sbjct: 264 LNKFAAETEINYEVVEKFKGKDLEYKKAKHPFIDRESLIVL-ADYVTLEDGTGCVHTAPG 322

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG EDY+T LKY LP+LSPV++EG FTEEAGK++GL +  D N  +++ L++  +LI  +
Sbjct: 323 HGAEDYLTGLKYNLPVLSPVNEEGIFTEEAGKYAGLKIW-DANKVIIEDLEKLGALIKTQ 381

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPP----------Q 572
             EH YP+ WR K P IFRAT QWF SV+    R+  ++ I +V+W P           +
Sbjct: 382 KIEHSYPHCWRCKNPIIFRATPQWFISVDKNNLREKVLEEIKKVEWHPKWGENRITAMVK 441

Query: 573 EAPGYGADVLRLWVSSV-----DYTGDVMIGPQVLRQMSDIYRK 611
           E P +     R+W + +      + G+V I  +V+     I  K
Sbjct: 442 ERPDWTISRQRVWGTPIPAIKCKHCGEVFIDEKVIDNFITIVEK 485



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 109/167 (65%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +    YGAD+LRLWVSS+D+  ++ +G  +++Q  ++Y+K+R TLR+LLGNL D+   
Sbjct: 601 PKEIVDKYGADILRLWVSSIDFFDNIRVGKNIIQQQVEVYKKIRNTLRFLLGNLSDFTKN 660

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
           + + +D L  +D++AL +L+ ++  + E YE Y+F K++ +I R+  V+LS  Y D+ KD
Sbjct: 661 DLVEFDKLLPLDKWALGRLQEVISQVTEHYEKYEFSKVYSLINRYCTVELSATYLDILKD 720

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           RLY     S  RRS QTV+   L ++++++AP+L    E+ +Q  P 
Sbjct: 721 RLYVEAKDSIYRRSAQTVMFYILDALIKMLAPVLVFTTEEAYQLSPL 767


>gi|418988014|ref|ZP_13535687.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1835]
 gi|377719802|gb|EHT43972.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           CIG1835]
          Length = 917

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/459 (44%), Positives = 280/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+  GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRSLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVDG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 121/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI+  +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSITESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|394993880|ref|ZP_10386619.1| isoleucyl-tRNA synthetase [Bacillus sp. 916]
 gi|393805204|gb|EJD66584.1| isoleucyl-tRNA synthetase [Bacillus sp. 916]
          Length = 921

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/466 (43%), Positives = 284/466 (60%), Gaps = 36/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REP++ K W++  ++  V ++  D   FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGNLPNREPDMQKDWEEQDIYRLVQERTKDRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++   + +K+++ +  
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKNKKVN-RKEMSVADF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A   ++ Q   FKR GV  DW NPY+TL PE+EA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEDYAWQQIERQREQFKRLGVRGDWENPYVTLQPEFEAQQIRVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F++        G+L          +WTT
Sbjct: 182 KPVNWSPSSESALAEAEIEYQDKR-SASIYVAFKVKDG----KGVLEN---GESFIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L+Y V+++     GD                   K +++ A  +
Sbjct: 234 TPWTMPANLGISVHPDLEYNVIKV-----GD-------------------KRYVVAAELI 269

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
               EA       +  +  G +LE     HP+  R   V++ GD++TT++GTG VHTAPG
Sbjct: 270 ENVAEACGFENPEVVASYKGRELEYITAEHPLYGRDSLVML-GDHVTTDAGTGCVHTAPG 328

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++D++   KYGL +L PVD++G  T+EA  F G+      N  + + L+E  +L+  E
Sbjct: 329 HGEDDFIVGQKYGLEVLCPVDEKGNMTDEAPGFEGM-FYDKANKPITEKLEENGALLKLE 387

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              H YP+DWRTKKPTIFRAT QWFAS++ FR   +DAI Q KWVP
Sbjct: 388 FITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLDAIKQTKWVP 433



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 108/168 (64%), Gaps = 1/168 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 605 PTKIAKQLGAEILRLWVSSVNYQADHPVSEDILKQVAEVYRKVRNTFRFLHGNLFDFNPS 664

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            N++   DL  +DQY L +L  ++  ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 665 VNAVDVKDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYHSIHNFCTIELSSFYLDFAK 724

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           D +Y        RRS QTV    LL++V++ APILPH A+++W +L F
Sbjct: 725 DVVYIEHADHPDRRSMQTVFYETLLALVKLTAPILPHTADEMWSHLSF 772


>gi|421731788|ref|ZP_16170911.1| isoleucyl-tRNA ligase [Bacillus amyloliquefaciens subsp. plantarum
           M27]
 gi|407074001|gb|EKE46991.1| isoleucyl-tRNA ligase [Bacillus amyloliquefaciens subsp. plantarum
           M27]
          Length = 921

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/466 (43%), Positives = 284/466 (60%), Gaps = 36/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REP++ K W++  ++  V ++  D   FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGNLPNREPDMQKDWEEQDIYRLVQERTKDRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++   + +K+++ +  
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKNKKVN-RKEMSVADF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A   ++ Q   FKR GV  DW NPY+TL PE+EA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEDYAWQQIERQREQFKRLGVRGDWENPYVTLQPEFEAQQIRVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F++        G+L          +WTT
Sbjct: 182 KPVNWSPSSESALAEAEIEYQDKR-SASIYVAFKVKDG----KGVLEN---GESFIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L+Y V+++     GD                   K +++ A  +
Sbjct: 234 TPWTMPANLGISVHPDLEYNVIKV-----GD-------------------KRYVVAAELI 269

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
               EA       +  +  G +LE     HP+  R   V++ GD++TT++GTG VHTAPG
Sbjct: 270 ENVAEACGFENPEVVASYKGRELEYITAEHPLYGRDSLVML-GDHVTTDAGTGCVHTAPG 328

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++D++   KYGL +L PVD++G  T+EA  F G+      N  + + L+E  +L+  E
Sbjct: 329 HGEDDFIVGQKYGLEVLCPVDEKGNMTDEAPGFEGM-FYDKANKPITEKLEENGALLKLE 387

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              H YP+DWRTKKPTIFRAT QWFAS++ FR   +DAI Q KWVP
Sbjct: 388 FITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLDAIKQTKWVP 433



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 108/168 (64%), Gaps = 1/168 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 605 PTKIAKQLGAEILRLWVSSVNYQADHPVSEDILKQVAEVYRKVRNTFRFLHGNLFDFDPS 664

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            N++   DL  +DQY L +L  ++  ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 665 VNAVDVKDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYHSIHNFCTIELSSFYLDFAK 724

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           D +Y        RRS QTV    LL++V++ APILPH A+++W +L F
Sbjct: 725 DVVYIEHADHPDRRSMQTVFYETLLALVKLTAPILPHTADEMWSHLSF 772


>gi|242373479|ref|ZP_04819053.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348842|gb|EES40444.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 916

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/460 (45%), Positives = 283/460 (61%), Gaps = 37/460 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G ++++LHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYQKALEKNKGNQSYILHDGPPYANGS 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKI+KD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSIAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   V  Q   FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALKQVDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++   PD    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---PDAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        QK +     S+ 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------QKYIIAEALSET 270

Query: 405 VPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V     +W  + + ++K   G +LE     HP  +R   +VI GD++TT++GTG VHTAP
Sbjct: 271 VAEA-LEWDKESIQLEKEFTGKELEYVEAQHPFLDR-VSLVINGDHVTTDAGTGCVHTAP 328

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  
Sbjct: 329 GHGEDDYIVGQKYELPVISPLDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKL 387

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
               H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 388 NFITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/202 (41%), Positives = 121/202 (59%), Gaps = 4/202 (1%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 653
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    + I  +DL  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDYNPETDRIPENDLLDVDRYLLNRLREFTA 690

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILV 750

Query: 714 SIVRVIAPILPHLAEDVWQNLP 735
            + +++APIL H AE+VW + P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772


>gi|385264667|ref|ZP_10042754.1| isoleucyl-tRNA synthetase [Bacillus sp. 5B6]
 gi|385149163|gb|EIF13100.1| isoleucyl-tRNA synthetase [Bacillus sp. 5B6]
          Length = 923

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/466 (43%), Positives = 284/466 (60%), Gaps = 36/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REP++ K W++  ++  V ++  D   FVLHDGPPYANG+
Sbjct: 5   YKDTLLMPKTDFPMRGNLPNREPDMQKDWEEQDIYRLVQERTKDRPKFVLHDGPPYANGD 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++   + +K+++ +  
Sbjct: 65  IHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKNKKVN-RKEMSVADF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A   ++ Q   FKR GV  DW NPY+TL PE+EA QI VFG+M+ +GYIY+G 
Sbjct: 124 RKLCEDYAWQQIERQREQFKRLGVRGDWENPYVTLQPEFEAQQIRVFGEMAKRGYIYKGL 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F++        G+L          +WTT
Sbjct: 184 KPVNWSPSSESALAEAEIEYQDKR-SASIYVAFKVKDG----KGVLEN---GESFIIWTT 235

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L+Y V+++     GD                   K +++ A  +
Sbjct: 236 TPWTMPANLGISVHPDLEYNVIKV-----GD-------------------KRYVVAAELI 271

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
               EA       +  +  G +LE     HP+  R   V++ GD++TT++GTG VHTAPG
Sbjct: 272 ENVAEACGFENPEVVASYKGRELEYITAEHPLYGRDSLVML-GDHVTTDAGTGCVHTAPG 330

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++D++   KYGL +L PVD++G  T+EA  F G+      N  + + L+E  +L+  E
Sbjct: 331 HGEDDFIVGQKYGLEVLCPVDEKGNMTDEAPGFEGM-FYDKANKPITEKLEENGALLKLE 389

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              H YP+DWRTKKPTIFRAT QWFAS++ FR   +DAI Q KWVP
Sbjct: 390 FITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLDAIKQTKWVP 435



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 108/168 (64%), Gaps = 1/168 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 607 PTKIAKQLGAEILRLWVSSVNYQADHPVSEDILKQVAEVYRKVRNTFRFLHGNLFDFNPS 666

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            N++   +L  +DQY L +L  ++  ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 667 VNAVDVKNLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYHSIHNFCTIELSSFYLDFAK 726

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           D +Y        RRS QTV    LL++V++ APILPH A+++W +L F
Sbjct: 727 DVVYIEHADHPDRRSMQTVFYETLLALVKLTAPILPHTADEMWSHLSF 774


>gi|51892369|ref|YP_075060.1| isoleucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81826163|sp|Q67Q27.1|SYI_SYMTH RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|51856058|dbj|BAD40216.1| isoleucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 938

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/470 (45%), Positives = 284/470 (60%), Gaps = 36/470 (7%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPY 160
           E+  YK T+++P+T F MRAN   REPE  K W++  ++  V     G   FVLHDGPPY
Sbjct: 3   EKTDYKATLNMPRTDFPMRANLPTREPEQLKKWEEMDLYNLVQRATAGRPKFVLHDGPPY 62

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG++H+G ALNKILKDII ++  +  Y   YVPGWD HGLPIEL+ L+ ++ D +K + 
Sbjct: 63  ANGDIHLGTALNKILKDIIVKHATMAGYDAPYVPGWDMHGLPIELRALKDMNIDRRK-ID 121

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
           P +LRAK  ++A   +  Q   FKR GV  DW NPY T+ PE+EA ++EVFG M+ +GYI
Sbjct: 122 PLELRAKCYEYAHHWLNVQREQFKRLGVRGDWENPYRTVAPEFEAKEVEVFGAMAAKGYI 181

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YRG KPV+W P   TALAEAE+EY E   S SIY  F +V       G L E      L 
Sbjct: 182 YRGLKPVYWCPYCETALAEAEIEYNE-KTSYSIYVRFPVVDP----RGKLPE---GSYLV 233

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AVAV+ +++Y V   +                 GN++          
Sbjct: 234 IWTTTPWTIPANLAVAVHPEVEYGVYATEK----------------GNLVVATALAEKFF 277

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
            +  +P  E           TL G+DLE   Y H + +R  PV++ GD++TTE GTGLVH
Sbjct: 278 QAVNLPAAEP--------VATLKGADLEGITYRHLLYDRVSPVIL-GDHVTTEDGTGLVH 328

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG ED+    KYGLP+L+PV+D+G FT EAG F+G+  +   N  ++K LDE   L
Sbjct: 329 TAPGHGHEDFEVGQKYGLPVLNPVNDQGVFTAEAGPFAGM-FIEKANPEIIKALDEAGML 387

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           + +    H+Y + WR K P I+RAT QWF  VEGF   A +A+  V+W+P
Sbjct: 388 LGQGKIRHQYAHCWRCKNPVIYRATVQWFVKVEGFMDIAKEAMNHVRWIP 437



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 105/160 (65%), Gaps = 1/160 (0%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLWV+S DY  D+ +   +L+Q++D YRK+R TLRYLLGNL+D+    + +  D
Sbjct: 619 YGADILRLWVASTDYRHDMALSENILKQVADAYRKIRNTLRYLLGNLYDFNPDTDMVERD 678

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           DL  ID++ + +L+ +++ + E+Y  Y++  ++  +  +  VDLS  Y D+ KDRLYT  
Sbjct: 679 DLLEIDRWQMHRLQEVIRKVTEAYREYEYHIVYHTLNNYCAVDLSAVYLDILKDRLYTSA 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
             S  RRS QTVL     +++R++ PIL   AE+ + +LP
Sbjct: 739 PASRERRSAQTVLYHVADALIRMLTPILTFTAEEAYSHLP 778


>gi|375362187|ref|YP_005130226.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens subsp.
           plantarum CAU B946]
 gi|451347087|ref|YP_007445718.1| isoleucyl-tRNA ligase [Bacillus amyloliquefaciens IT-45]
 gi|371568181|emb|CCF05031.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens subsp.
           plantarum CAU B946]
 gi|449850845|gb|AGF27837.1| isoleucyl-tRNA ligase [Bacillus amyloliquefaciens IT-45]
          Length = 921

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/466 (43%), Positives = 284/466 (60%), Gaps = 36/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REP++ K W++  ++  V ++  D   FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGNLPNREPDMQKDWEEQDIYRLVQERTKDRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  Y   YVPGWD HGLPIE  + ++   + +K+++ +  
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKNKKVN-RKEMSVADF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A   ++ Q   FKR GV  DW NPY+TL PE+EA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKLCEDYAWQQIERQREQFKRLGVRGDWENPYVTLQPEFEAQQIRVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F++        G+L          +WTT
Sbjct: 182 KPVNWSPSSESALAEAEIEYQDKR-SASIYVAFKVKDG----KGVLEN---GESFIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L+Y V+++     GD                   K +++ A  +
Sbjct: 234 TPWTMPANLGISVHPDLEYNVIKV-----GD-------------------KRYVVAAELI 269

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
               EA       +  +  G +LE     HP+  R   V++ GD++TT++GTG VHTAPG
Sbjct: 270 ENVAEACGFENPEVVASYKGRELEYITAEHPLYGRDSLVML-GDHVTTDAGTGCVHTAPG 328

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++D++   KYGL +L PVD++G  T+EA  F G+      N  + + L+E  +L+  E
Sbjct: 329 HGEDDFIVGQKYGLEVLCPVDEKGNMTDEAPGFEGM-FYDKANKPITEKLEENGALLKLE 387

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              H YP+DWRTKKPTIFRAT QWFAS++ FR   +DAI Q KWVP
Sbjct: 388 FITHSYPHDWRTKKPTIFRATAQWFASIKDFRSDLLDAIKQTKWVP 433



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 108/168 (64%), Gaps = 1/168 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P + A   GA++LRLWVSSV+Y  D  +   +L+Q++++YRK+R T R+L GNL D+   
Sbjct: 605 PTKIAKQLGAEILRLWVSSVNYQADHPVSEDILKQVAEVYRKVRNTFRFLHGNLFDFDPS 664

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            N++   DL  +DQY L +L  ++  ++++Y+ Y+F  ++  I  F  ++LS+FY D AK
Sbjct: 665 INAVDVKDLREVDQYMLIKLNKLIDKVKKAYDEYEFAVVYHSIHNFCTIELSSFYLDFAK 724

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           D +Y        RRS QTV    LL++V++ APILPH A+++W +L F
Sbjct: 725 DVVYIEHADHPDRRSMQTVFYETLLALVKLTAPILPHTADEMWSHLSF 772


>gi|416839234|ref|ZP_11902628.1| isoleucyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|416847398|ref|ZP_11907120.1| isoleucyl-tRNA synthetase [Staphylococcus aureus O46]
 gi|323440965|gb|EGA98672.1| isoleucyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442282|gb|EGA99912.1| isoleucyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 917

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/459 (45%), Positives = 282/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMAEKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y     Q  + GD                  K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYG----QYNVNGD------------------KYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++    G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLENEYTGKELEYVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  ++AI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILEAI 427



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|334341797|ref|YP_004546777.1| isoleucyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
 gi|334093151|gb|AEG61491.1| isoleucyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
          Length = 931

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 203/467 (43%), Positives = 289/467 (61%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           Y  T++LP+T F MR N   REPEI K W +  ++ +V +KN G+  ++LHDGPPYANG+
Sbjct: 4   YSKTLNLPQTEFPMRGNLPQREPEILKYWSEIGLYNKVQEKNKGKTKYILHDGPPYANGH 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH LNK+LKD++ +Y+ ++ Y   YVPGWD HGLPIE + +++L  + +  + P + 
Sbjct: 64  IHLGHTLNKVLKDMVVKYRSMRGYDAPYVPGWDTHGLPIEQQAIKALGIN-RHQVDPVEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   +A      Q   F+R GV  DW  PY TL P+YEA Q+ VFG+M+ +GYIY+G 
Sbjct: 123 RNKCKDYALKFANIQSEEFQRLGVRGDWERPYYTLLPQYEATQVRVFGEMAKKGYIYKGL 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W  S  TALAEAE+EY +   S SIY  F +        G+L E   D  + +WTT
Sbjct: 183 KPVYWCASCETALAEAEVEYGD-KTSPSIYVKFPVKEG----KGILPE---DAAVVIWTT 234

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A++V+ + +Y +  +                      K QK   ++VA +L
Sbjct: 235 TPWTLPANVAISVHPEFEYVLARV----------------------KGQK---VVVAKEL 269

Query: 405 VPTL-EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           +    E     +  I  T  G  L+     HP  +R   +VI G+++T ++GTG VHTAP
Sbjct: 270 LEAFKEVMEAEEAEILATFKGEQLDRVVCRHPFVDRDS-LVILGEHVTLDAGTGCVHTAP 328

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED++ + +YGLP+LSP+D+ GKFT E GKF G  +L D N +V++ L EQ +L+  
Sbjct: 329 GHGEEDFLAAKQYGLPVLSPLDNRGKFTAEGGKFQGQFIL-DANKSVIEELQEQGALLGL 387

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              +H+YP+ WR K+P  FRATEQWFASVEGFR+  + AI  +KWVP
Sbjct: 388 GNIKHQYPHCWRCKQPVFFRATEQWFASVEGFRRETLQAIRNIKWVP 434



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 110/161 (68%), Gaps = 1/161 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSS DY GD+ +   +L+QM++ YRK+R T R+LLGNL+D+    + ++Y D
Sbjct: 619 GADILRLWVSSADYRGDLALSQNILKQMTESYRKIRNTARFLLGNLYDFDPAKDKVAYRD 678

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           LP +D+ AL +L  ++K +  +YE Y+F  ++  I  + ++DLS FY D+ KDRLYT   
Sbjct: 679 LPELDRVALMELNKLIKRVLAAYEDYEFHVVYHAIHNYCVLDLSAFYLDIIKDRLYTAVP 738

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
            S  RR+ QTVL   L ++VR++ P+L    E++++++P A
Sbjct: 739 ASLERRAAQTVLCEVLDALVRLLVPVLTFTTEEIYRHMPVA 779


>gi|228992630|ref|ZP_04152556.1| Isoleucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228766962|gb|EEM15599.1| Isoleucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 962

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/470 (44%), Positives = 290/470 (61%), Gaps = 45/470 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG+
Sbjct: 44  YKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANGD 103

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           +HMGHALNK+LKD I RYK +  Y   YVPGWD HGLPIE    Q+L      +K++T +
Sbjct: 104 IHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTVA 159

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R   A++A   V  Q   FKR GV ADW+ PY+TL+P YEA QI+VFG+M+ +GYIY+
Sbjct: 160 EFRKLCAEYAYEQVNRQREQFKRLGVRADWDRPYITLEPAYEAQQIKVFGEMAKKGYIYK 219

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G+KPV+WSP+S +ALAEAE+EY +   S SIY  F +        G       D    +W
Sbjct: 220 GQKPVYWSPTSESALAEAEIEYNDKK-SASIYVAFPVKDGKDVLEG-------DEKFIIW 271

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+AS
Sbjct: 272 TTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIAS 306

Query: 403 DLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           +L  T+    +W    V+ KT+ GS+LE     HP   R   V++ G+++TT++GTG VH
Sbjct: 307 ELFDTVSKTLEWENAEVV-KTVKGSELEYTVAKHPFYERDSLVML-GEHVTTDAGTGCVH 364

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG++D++   +YGL +L PVDD+G  T EA  F GL      N  + + L+E  +L
Sbjct: 365 TAPGHGEDDFLVGKQYGLEVLCPVDDKGVLTSEAPGFEGL-FYDKANKPITEKLEEVGAL 423

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +      H YP+DWRTKKP IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 424 LKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQAVEETKWVP 473



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 114/175 (65%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 638 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 696

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+    ++++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 697 NLADFNPSQDAVAKAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 756

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY        RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 757 SFYLDFAKDILYIEAENHHDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVP 811


>gi|312793533|ref|YP_004026456.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180673|gb|ADQ40843.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 920

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 211/471 (44%), Positives = 299/471 (63%), Gaps = 40/471 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +  T++LPKT F MRAN   REP+  K W ++ +F ++ +KN + + F+LHDGPPYANG+
Sbjct: 3   WSQTLNLPKTDFPMRANLAQREPQFLKFWQENDIFKKMLEKNKNNKKFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK+LKDI+N+YK LQ Y   Y+PGWD HGLPIE +V++    + + ++ P + 
Sbjct: 63  IHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQVIKKFGVN-RHEVDPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   +  Q   FKR GV+ +W NPY+TLDP++EA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKKCKEFALNYIDIQREQFKRLGVFGEWENPYMTLDPKFEARQIRVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD--LGLAVW 342
           KPV+W PS  TALAEAE+EY E   + SIY  F ++         LN  + D  + + +W
Sbjct: 182 KPVYWCPSCETALAEAEIEYQEDR-TYSIYVKFEVID---DKGLFLNLPIGDKKVYIVIW 237

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTT WT+P N A+A+NA   Y++V+I                  GN +       ++VAS
Sbjct: 238 TTTTWTLPGNLAIALNADFDYSLVDI------------------GNEI-------LVVAS 272

Query: 403 DLVPTLEAKWGTKLVIKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           +LV  +      K+   + +A   G DLE  +  HP  +R   +VI G+++T E+GTG V
Sbjct: 273 ELVERVMKT--NKIEQYQEIARFKGKDLEYIKCKHPFLDRS-SLVILGEHVTLEAGTGCV 329

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG+ED+    +Y +P++ PVD++G  T+EAGKF+GL    D N  + K L+    
Sbjct: 330 HTAPGHGEEDFEVCQRYNIPVIVPVDNKGYLTKEAGKFAGL-FYEDSNKEIAKELEASGH 388

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+  E   H+YP+ WR K P IFRATEQWFASV+GFR+ A+ A+  VKWVP
Sbjct: 389 LLGVEKITHQYPHCWRCKNPVIFRATEQWFASVKGFREEALKAVDDVKWVP 439



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 85/211 (40%), Positives = 137/211 (64%), Gaps = 13/211 (6%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           +GAD+LRLW  S DYT D+ I  ++++Q+++IYRK+R T R+LLGNL+D+    + + Y+
Sbjct: 619 FGADILRLWCVSADYTTDMRISKEIIKQLTEIYRKIRNTARFLLGNLYDFNPKTDKVGYE 678

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           DL  ID++AL +L  +++ + ++YE Y + +++ ++  F ++D+SN Y D+ KDRLY   
Sbjct: 679 DLKEIDRWALQRLYMLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASK 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
           + S  RRS QTV+   L+++ ++IAPIL   AE++WQN+  A+  ED   AE VF + WP
Sbjct: 739 SESLDRRSAQTVMYEILVALTKLIAPILSFTAEEIWQNI--AFKEED---AESVFLTSWP 793

Query: 756 VLDE---KWRTFPVGEIYFWGKILEVIVVVT 783
            +DE   K  T        W KI+E+  +V 
Sbjct: 794 KVDEGILKDETLREK----WNKIIEIKDIVA 820


>gi|358054989|ref|ZP_09147517.1| isoleucyl-tRNA synthetase [Staphylococcus simiae CCM 7213]
 gi|357256723|gb|EHJ07055.1| isoleucyl-tRNA synthetase [Staphylococcus simiae CCM 7213]
          Length = 916

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 211/462 (45%), Positives = 284/462 (61%), Gaps = 41/462 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G + F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPKIQEQWDAEDQYHQALEKNKGNKTFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKI+KD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   FKR GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFKRLGVRGDFNDPYITLQPEYEAAQIRLFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++   PD    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDVKDG----KGIVD---PDAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI--IVAS 402
           TPWT+P+N A+ V+ +L Y    +                       D KK  I   +A 
Sbjct: 233 TPWTIPSNVAITVHPELNYGQYNV-----------------------DGKKYIIAEALAD 269

Query: 403 DLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            +   L+  W  + L ++K   G +LE     HP    +  +VI GD++TT++GTG VHT
Sbjct: 270 SVADALD--WDKETLKLEKEYTGKELEYVVTQHPFLELES-LVINGDHVTTDAGTGCVHT 326

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY+   KY LP++SP+DD+G FTEE G F G+      N AV + L E+ +L+
Sbjct: 327 APGHGEDDYIVGQKYELPVISPIDDKGVFTEEGGPFEGM-FYDKANKAVTELLTEKGALL 385

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
             E   H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 386 KLEFITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/201 (43%), Positives = 120/201 (59%), Gaps = 9/201 (4%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +S+  +DL  +D+Y L +L     N   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 ETDSVPENDLLEVDRYLLNRLREFTANTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYTLEDG 743
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     +  L D 
Sbjct: 725 KDILYIEERDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKEQSVHLADM 784

Query: 744 SAAEFVFESKWPVLDEKWRTF 764
                V E    +LD KW TF
Sbjct: 785 PK---VVEVDQDLLD-KWHTF 801


>gi|228475068|ref|ZP_04059796.1| isoleucine-tRNA ligase [Staphylococcus hominis SK119]
 gi|418620557|ref|ZP_13183361.1| isoleucine--tRNA ligase [Staphylococcus hominis VCU122]
 gi|228271053|gb|EEK12441.1| isoleucine-tRNA ligase [Staphylococcus hominis SK119]
 gi|374822687|gb|EHR86707.1| isoleucine--tRNA ligase [Staphylococcus hominis VCU122]
          Length = 916

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/461 (45%), Positives = 285/461 (61%), Gaps = 39/461 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + W+ +  + +  +KN+G ++F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPKIQEQWEANNHYQKALEKNEGNQSFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKI+KDII RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKIIKDIIVRYKTMQGFYSPYVPGWDTHGLPIE-QALTKKGVDRKK-MSIAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   V+ Q   FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQVELQKQDFKRLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +      + G ++E   D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDSKGTIDE---DAQFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+  L+Y    +                          K ++I  +  
Sbjct: 233 TPWTLPSNVAITVHPDLKYGQYNVNG------------------------KKYVIAEALA 268

Query: 405 VPTLEA-KWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
               EA  W    + ++K   G +LE     HP  +R   +VI G ++TT++GTG VHTA
Sbjct: 269 ESVSEALGWDKDTIQLEKEFTGKELEYVETQHPFIDR-VSLVINGGHVTTDAGTGCVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DYV   KY LP++SP+DD+G FTEE G+F G+      N AV   L ++ +L+ 
Sbjct: 328 PGHGEDDYVVGQKYDLPVISPLDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTDKGALLK 386

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
            +   H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 387 LDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDILDAI 427



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 120/202 (59%), Gaps = 4/202 (1%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 REQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPNQVVKQKGADIARLWVSSTDYLAD 630

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 653
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +S+   +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSVPEHELLEVDRYLLNRLREFTA 690

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           +    Y+++ +  I+Q +Q FI V+LSNFY D  KD LY     +  RRS QTVL   L+
Sbjct: 691 STINHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQKDAHKRRSMQTVLYQILV 750

Query: 714 SIVRVIAPILPHLAEDVWQNLP 735
            + +++APIL H AE+VW + P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772


>gi|228998676|ref|ZP_04158263.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229006178|ref|ZP_04163864.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228755019|gb|EEM04378.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228761144|gb|EEM10103.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 962

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/470 (44%), Positives = 290/470 (61%), Gaps = 45/470 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK+T+ +PKT F MR N   REP + + W +  ++ +V +   G   FVLHDGPPYANG+
Sbjct: 44  YKNTLLMPKTEFPMRGNLPKREPAMQEKWAEMNIYEKVQEHTKGRPLFVLHDGPPYANGD 103

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           +HMGHALNK+LKD I RYK +  Y   YVPGWD HGLPIE    Q+L      +K++T +
Sbjct: 104 IHMGHALNKVLKDFIVRYKSMTGYCAPYVPGWDTHGLPIE----QALTNKGVKRKEMTVA 159

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R   A++A   V  Q   FKR GV ADW+ PY+TL+P YEA QI+VFG+M+ +GYIY+
Sbjct: 160 EFRKLCAEYAYEQVNRQREQFKRLGVRADWDRPYITLEPAYEAQQIKVFGEMAKKGYIYK 219

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G+KPV+WSP+S +ALAEAE+EY +   S SIY  F +        G       D    +W
Sbjct: 220 GQKPVYWSPTSESALAEAEIEYNDKK-SASIYVAFPVKDGKDVLEG-------DEKFIIW 271

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  ++V+ +L+Y++V++                       D+K    I+AS
Sbjct: 272 TTTPWTLPANLGISVHPELEYSIVKVN----------------------DEK---YIIAS 306

Query: 403 DLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           +L  T+    +W    V+ KT+ GS+LE     HP   R   V++ G+++TT++GTG VH
Sbjct: 307 ELFDTVSKTLEWENAEVV-KTVKGSELEYTVAKHPFYERDSLVML-GEHVTTDAGTGCVH 364

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG++D++   +YGL +L PVDD+G  T EA  F GL      N  + + L+E  +L
Sbjct: 365 TAPGHGEDDFLVGKQYGLEVLCPVDDKGVLTSEAPGFEGL-FYDKANKPITEKLEEVGAL 423

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +      H YP+DWRTKKP IFRAT QWFAS+E FR+  + A+ + KWVP
Sbjct: 424 LKLTFITHSYPHDWRTKKPIIFRATAQWFASIEAFRKELLQAVEETKWVP 473



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 114/175 (65%), Gaps = 2/175 (1%)

Query: 562 AIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLG 621
           +IG +  VP +     G D+LRLWVSSVDY  DV I   +L+Q++++YRK+R T R+LLG
Sbjct: 638 SIGNIV-VPKKIMDQLGGDILRLWVSSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLG 696

Query: 622 NLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           NL D+    ++++  +L  +D+Y L +L +++  ++E+YE+Y F  ++  I  F  +DLS
Sbjct: 697 NLADFNPSQDAVAKAELREVDRYMLVKLNDLITKVKEAYETYDFAAVYHAIHNFCTIDLS 756

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           +FY D AKD LY        RR+ QTVL   L+++ +++ PILPH A++VW  +P
Sbjct: 757 SFYLDFAKDILYIEAANHHDRRAIQTVLYDVLVALTKLVTPILPHTADEVWPYVP 811


>gi|408356931|ref|YP_006845462.1| isoleucyl-tRNA synthetase [Amphibacillus xylanus NBRC 15112]
 gi|407727702|dbj|BAM47700.1| isoleucyl-tRNA synthetase [Amphibacillus xylanus NBRC 15112]
          Length = 916

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 207/466 (44%), Positives = 289/466 (62%), Gaps = 37/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N   +EPE+ K W++  ++ +V ++  G   FVLHDGPPYANG+
Sbjct: 3   YKETLLMPKTEFPMRGNLPNKEPELQKAWEEDNLYQQVQERTKGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNK+LKD I +YK +  Y   YVPGWD HGLPIE  + +   +  +K +T ++ 
Sbjct: 63  IHMGHALNKVLKDFIVKYKSMAGYHAPYVPGWDTHGLPIETALAKKKVD--RKKMTTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R   A++A   +  Q A FK+ GV  DW+NPY+TL+ EYEAAQIEVFG+M+ +GYIY+G 
Sbjct: 121 RRLCAEYALEQIDNQRAQFKQLGVRGDWDNPYITLNKEYEAAQIEVFGEMAKKGYIYKGL 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +       SG       D    +WTT
Sbjct: 181 KPVYWSPSSESALAEAEIEYQDKR-SPSIYVAFDVKDGGELLSG-------DEKFVIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+A++  L Y VV +            +KK   G  L ++      VA+ L
Sbjct: 233 TPWTLPANLAIALHPNLDYVVVNVN-----------DKKYIIGEELLEK------VATKL 275

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
                 +W    + KK   G + +     HP  +R   +++ GD++TTE GTGLVHTAPG
Sbjct: 276 ------EWADYTITKK-FKGIEADRLVAKHPFYDRDSLIIV-GDHVTTEDGTGLVHTAPG 327

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++D++   KY L +L PVD +G FT+EA  F G+      N  V   L+E+ +L+  +
Sbjct: 328 HGEDDFIVGQKYDLDVLCPVDYKGVFTDEAPGFEGV-FYDKANKMVTDLLEEKGALLSLD 386

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              H YP+DWRTK+P I+RAT QWFAS++ FR+  ++ IG V+W+P
Sbjct: 387 FITHSYPHDWRTKQPVIYRATPQWFASIKDFREEILEEIGNVEWLP 432



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 116/186 (62%), Gaps = 2/186 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    +IG V  VP +    YGAD+LRLWV+SVDY  DV +   ++RQ ++ YR
Sbjct: 586 TLDGQGRKMSKSIGNVI-VPAKIMKQYGADILRLWVASVDYQADVRVSDDIIRQTTEGYR 644

Query: 611 KLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+LLGNL D+    N +    L  +D+Y L +L+ ++  +  +Y++Y F  +F 
Sbjct: 645 KIRNTFRFLLGNLADFDPEVNKVEDQHLDELDRYMLVKLQQLISRVLNAYDNYDFSTVFN 704

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
           +I +F   +LS+FY D AKD LY     S  RR+ QTV   ++++IV++I PIL H AE+
Sbjct: 705 LIHQFCSQELSSFYLDYAKDILYIEQENSQRRRAIQTVYYENIVTIVKLITPILTHTAEE 764

Query: 730 VWQNLP 735
           VW  +P
Sbjct: 765 VWSYIP 770


>gi|312127589|ref|YP_003992463.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777608|gb|ADQ07094.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 920

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/473 (44%), Positives = 300/473 (63%), Gaps = 44/473 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +  T++LPKT F MRAN   REP+  K W ++ +F ++ +KN + + F+LHDGPPYANG+
Sbjct: 3   WSQTLNLPKTDFPMRANLAQREPQFLKFWQENDIFKKMLEKNKNNKKFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK+LKDI+N+YK LQ Y   Y+PGWD HGLPIE +V++    + + ++ P + 
Sbjct: 63  IHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQVIKKFGVN-RHEVDPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA + +  Q   FKR GV+ +W NPY+TLDP++EA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKKCKEFALSYIDIQRQQFKRLGVFGEWENPYMTLDPKFEARQIRVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP----DLGLA 340
           KPV+W PS  TALAEAE+EY E   + SIY  F +     +  GL +  LP     + + 
Sbjct: 182 KPVYWCPSCETALAEAEIEYQEDR-TYSIYVKFEV----ENDKGLFSN-LPIGDKKVYIV 235

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTT WT+P N A+A+NA   Y++V++                  GN +       +IV
Sbjct: 236 IWTTTTWTLPGNLAIALNADFDYSLVDV------------------GNEI-------LIV 270

Query: 401 ASDLVPTLEAKWGTKLVIKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           AS+LV  +      K+     +A   G DLE  +  HP  +R   +VI G+++T E+GTG
Sbjct: 271 ASELVERVMKT--NKIEQYHEIARFKGKDLEYVKCKHPFLDRT-SLVILGEHVTLEAGTG 327

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
            VHTAPGHG+ED+    +Y +P++ PVD++G  T+EAGKF+GL    D N  + K L+  
Sbjct: 328 CVHTAPGHGEEDFEVCQRYNIPVIVPVDNKGYLTKEAGKFAGL-FYEDSNKEIAKELESS 386

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             L+  E   H+YP+ WR K P IFRATEQWFASV+GFR+ A+ A+  VKWVP
Sbjct: 387 GHLLGVEKITHQYPHCWRCKNPVIFRATEQWFASVKGFREEALKAVDDVKWVP 439



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 135/204 (66%), Gaps = 9/204 (4%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           +GAD+LRLW  S DYT D+ I   +++Q+++IYRK+R T R+LLGNL+D+    + + Y+
Sbjct: 619 FGADILRLWCVSADYTTDMRISKDIIKQLTEIYRKIRNTARFLLGNLYDFDPKTDKVGYE 678

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  ID++AL +L  +++ + ++YE Y + +++ ++  F ++D+SN Y D+ KDRLY   
Sbjct: 679 NLKEIDKWALQRLYKLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASK 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
           + S  RRS QTV+   L+++ ++IAPIL   AE++WQN+  A+  ED   AE VF + WP
Sbjct: 739 SESLDRRSAQTVMYEILIALTKLIAPILSFTAEEIWQNI--AFKEED---AESVFLTSWP 793

Query: 756 VLDEK-WRTFPVGEIYFWGKILEV 778
            ++E   R   + E   W KI+E+
Sbjct: 794 SINEGILRDEALREK--WDKIIEI 815


>gi|425736767|ref|ZP_18855043.1| isoleucyl-tRNA ligase [Staphylococcus massiliensis S46]
 gi|425483239|gb|EKU50391.1| isoleucyl-tRNA ligase [Staphylococcus massiliensis S46]
          Length = 915

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/468 (44%), Positives = 291/468 (62%), Gaps = 43/468 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP++ + W +  ++ ++ +KN D  +F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTGFPMRGGLPNKEPKLQEEWKEKDIYNKLLEKNKDNTHFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           LHMGHALNK+LKD I RYK +Q Y   YVPGWD HGLPIE    Q+L +    +K ++ +
Sbjct: 63  LHMGHALNKMLKDFIVRYKSMQGYYAPYVPGWDTHGLPIE----QALTKKGVNRKQMSTA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R K   FA+  +  Q   FKR GV  D++NPY+TL P+YEAAQI +FG+M+ +G IY+
Sbjct: 119 EFREKCEDFARKQIDGQREDFKRLGVNGDFDNPYITLTPQYEAAQIRLFGEMADKGLIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           GKKPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++E   +    +W
Sbjct: 179 GKKPVYWSPSSESSLAEAEIEYHDKR-SPSIYVAFDVEDG----KGVVDE---EAKFIIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+ V+ +L Y    +Q  + G+                     +II  +
Sbjct: 231 TTTPWTIPSNVAITVSPELTY----VQMNVNGEK--------------------YIIAEA 266

Query: 403 DLVPTLEA-KWGTKLVIK-KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
            +    EA +W  + +++ K   G DLE     HP  +R   +VI GD++TT++GTG+VH
Sbjct: 267 LVDEVAEALEWDKESIVREKDYNGKDLEYVEAKHPFIDR-ISLVIHGDHVTTDAGTGVVH 325

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG++DY    KY L ++SP+DD+G FTEEAG+F G+      N  V   L E+ +L
Sbjct: 326 TAPGHGEDDYFVCQKYDLDVISPIDDKGVFTEEAGQFEGM-FYDKANKEVTDLLTEKGAL 384

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
           +  E   H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI   K+
Sbjct: 385 LKLEFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDILDAIDDTKF 432



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 84/204 (41%), Positives = 122/204 (59%), Gaps = 15/204 (7%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP +     GAD+ RLW SSVDY  DV I  ++L+Q +D+YRK+R TLR++LGNL+D+  
Sbjct: 605 VPDKIVKQKGADIARLWASSVDYLADVRISDEILKQTADVYRKIRNTLRFMLGNLNDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++IS  +L  +D+Y L +L     +  ++Y++Y +  I+Q IQ FI V+LSNFY D  
Sbjct: 665 NTDAISESELLEVDKYLLNRLREFTAHTIDNYDNYDYLDIYQEIQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     +  RRS QTVL   LL++ +++API+PH  ++VW ++            E
Sbjct: 725 KDILYIEKQDALKRRSMQTVLYQILLNMTKLLAPIIPHTTDEVWSHMEHV-------EEE 777

Query: 748 FVFESKWPV-------LDEKWRTF 764
            V  S +PV       L EKW TF
Sbjct: 778 SVHLSDFPVKEEVDSALLEKWSTF 801


>gi|385837521|ref|YP_005875151.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris A76]
 gi|358748749|gb|AEU39728.1| Isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris A76]
          Length = 901

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/470 (44%), Positives = 293/470 (62%), Gaps = 41/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MRA    +EP   K W D  ++ +  + N+G+ +F+LHDGPPYANG
Sbjct: 2   KIKDTLNLGKTAFPMRAGLPNKEPNWQKDWSDATLYEKRQELNEGKPSFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII RYK +  ++  YVPGWD HGLPIE ++ ++  +  + DL    
Sbjct: 62  NIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLPIEQQLAKAGMKRKEMDLL--D 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              +  K+A   V  Q + FK  GV ADW+ PYLTL PEYEAAQI VFG+M+ +GYIY+G
Sbjct: 120 YLEECRKYAMKQVDMQRSDFKSLGVLADWDRPYLTLLPEYEAAQIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           +KP++WSPSS ++LAEAE+EY +   S SI+  F+       T G L E   D+   +WT
Sbjct: 180 QKPIYWSPSSESSLAEAEIEYQDVR-SASIFVAFKA----KDTKGKLPE---DVEFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P+N  +  +    Y+VV +            N+K               ++AS+
Sbjct: 232 TTPWTIPSNLGIFAHPDYDYSVVAVN-----------NRK--------------FVIASE 266

Query: 404 LVPTLEAK--WGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++  +  K  W    V+ +TL GSDLE     HP  +R+  +++  DY+T +SGTGLVH 
Sbjct: 267 MLEAVAEKLEWENPEVL-QTLKGSDLEYMVAKHPFYDRET-LIMNADYVTLDSGTGLVHV 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY  S KY LP+LSP+D+ G +T+EA    G+    DGN  V  +L+E+ +L+
Sbjct: 325 APGHGEDDYFASRKYKLPVLSPIDNRGYYTDEAPGLEGV-FYDDGNKIVSNWLEEKDALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
             E + H YP+DWRTKKP IFRAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 384 KLEFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRQNILDEVEKVDWVIP 433



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 111/185 (60%), Gaps = 6/185 (3%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP      +GAD+LRLWV+S+D   DV +   +L Q+S++YRK+R TLR+L+ N  D+  
Sbjct: 603 VPKDVTKKFGADILRLWVASIDTESDVRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNP 662

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + I + +L  +D+Y L +   +VK I ++Y++Y F  +++ I  FI  DLS+FY D A
Sbjct: 663 KEDGIDFAELRPVDKYMLVKFNELVKQIHKAYDNYSFMSVYKSIINFITNDLSSFYLDFA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLED 742
           KD +Y     S  RRS QTV+   L  +V+V+ PILPH AE+ W  L      FAY  E 
Sbjct: 723 KDVVYIEAANSPERRSMQTVMYVILKDLVKVLVPILPHTAEETWTYLEHEPENFAYLAEM 782

Query: 743 GSAAE 747
             AAE
Sbjct: 783 PEAAE 787


>gi|320033836|gb|EFW15782.1| isoleucyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 1012

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 215/476 (45%), Positives = 286/476 (60%), Gaps = 40/476 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R  A  +   + +  DD   + R     D   FVLHDGPPYANG+L
Sbjct: 12  WSSTLKLPKSTFPARIAAAEQAKYLQRCTDDLYAWQRRQRPADSAQFVLHDGPPYANGDL 71

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDII R +L +  +V Y+PGWDCHGLPIELK L S ++   KDL P+ +R
Sbjct: 72  HIGHALNKILKDIICRVQLAKGKRVEYIPGWDCHGLPIELKALNSKNQ-VGKDLGPANIR 130

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
           A A + A+ TV  QM  F+ +GV  DW N + T+D E+E  Q+EVF +M  +G IYR  K
Sbjct: 131 AIARQLAEETVVKQMKGFREWGVMGDWENHWKTMDKEFEMRQLEVFLEMVDKGLIYRRYK 190

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAP------PSTSGLLNEFLPDLGL 339
           PV+WSPS+ TALAEAELEY + HVS +    F + + P      P  SG       ++  
Sbjct: 191 PVYWSPSTGTALAEAELEYRDDHVSHAALVKFPLATMPTEIREHPLASG------DEIYA 244

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PANAA+AV+  L Y +V  QS   G      +++    ++L++  KV + 
Sbjct: 245 VIWTTTPWTLPANAAIAVSKDLNYIIV--QSERHGKLLIAESRREYVEHLLEESLKVLMS 302

Query: 400 VASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           VA           GT L+             R +    +  C  +I GD++T ESG+GLV
Sbjct: 303 VA-----------GTSLLSS---------TYRPLFKDTDGSCQPIIAGDFVTDESGSGLV 342

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYL 514
           H APGHG EDY   L++GL   +PVD EG+FT+ A        SG  VL +GN AVVKYL
Sbjct: 343 HCAPGHGMEDYEVCLEHGLSASAPVDGEGRFTDAAMPSSPSMLSGKHVLNEGNKAVVKYL 402

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +E+  L+ +  Y+HKYPYDWR+K P I RATEQWFA V   RQ A+ A+  V++VP
Sbjct: 403 EEEGRLLHKHKYKHKYPYDWRSKLPVIIRATEQWFADVGDIRQQAVSALLNVRFVP 458



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 3/165 (1%)

Query: 574 APGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGN 630
           AP Y   G D LRLWV+  DYT DV+IG  +L+  +    K R T R +LG L D+   N
Sbjct: 665 APVYDALGPDALRLWVAGSDYTKDVVIGQPILKATNGSLHKYRVTFRLILGALQDFDPKN 724

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            I Y+ L   D+ AL QL ++V   +E++ + +FFK    I R+   D S FY +  KDR
Sbjct: 725 QIPYESLRATDKIALSQLRSLVLACQEAFSNLEFFKAVTAINRWANADFSAFYIESIKDR 784

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           LY   T   +RR+ QT +      +  ++ P++P L E+ W++ P
Sbjct: 785 LYADSTDGLSRRAAQTTIFHIYSHLQSILGPLVPLLVEESWEHTP 829


>gi|303310449|ref|XP_003065237.1| isoleucyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240104897|gb|EER23092.1| isoleucyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 1012

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 215/476 (45%), Positives = 286/476 (60%), Gaps = 40/476 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R  A  +   + +  DD   + R     D   FVLHDGPPYANG+L
Sbjct: 12  WSSTLKLPKSTFPARIAAAQQAKYLQRCTDDLYAWQRRQRPADSAQFVLHDGPPYANGDL 71

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDII R +L +  +V Y+PGWDCHGLPIELK L S ++   KDL P+ +R
Sbjct: 72  HIGHALNKILKDIICRVQLAKGKRVEYIPGWDCHGLPIELKALNSKNQ-VGKDLGPANIR 130

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
           A A + A+ TV  QM  F+ +GV  DW N + T+D E+E  Q+EVF +M  +G IYR  K
Sbjct: 131 AIARQLAEETVVKQMKGFREWGVMGDWENHWKTMDKEFEMRQLEVFLEMVDKGLIYRRYK 190

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAP------PSTSGLLNEFLPDLGL 339
           PV+WSPS+ TALAEAELEY + HVS +    F + + P      P  SG       ++  
Sbjct: 191 PVYWSPSTGTALAEAELEYRDDHVSHAALVKFPLATMPTEIREHPLASG------DEIYA 244

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PANAA+AV+  L Y +V  QS   G      +++    ++L++  KV + 
Sbjct: 245 VIWTTTPWTLPANAAIAVSKDLNYIIV--QSERHGKLLIAESRREYVEHLLEESLKVLMS 302

Query: 400 VASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           VA           GT L+             R +    +  C  +I GD++T ESG+GLV
Sbjct: 303 VA-----------GTSLLSS---------TYRPLFKDTDGSCQPIIAGDFVTDESGSGLV 342

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYL 514
           H APGHG EDY   L++GL   +PVD EG+FT+ A        SG  VL +GN AVVKYL
Sbjct: 343 HCAPGHGMEDYEVCLEHGLSASAPVDGEGRFTDAAMPSSPSMLSGKHVLNEGNKAVVKYL 402

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +E+  L+ +  Y+HKYPYDWR+K P I RATEQWFA V   RQ A+ A+  V++VP
Sbjct: 403 EEEGRLLHKHKYKHKYPYDWRSKLPVIIRATEQWFADVGDIRQQAVSALLNVRFVP 458



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 3/165 (1%)

Query: 574 APGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGN 630
           AP Y   G D LRLWV+  DYT DV+IG  +L+  +    K R T R +LG L D+   N
Sbjct: 665 APVYDALGPDALRLWVAGSDYTKDVVIGQPILKATNGSLHKYRVTFRLILGALQDFDPKN 724

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
            I Y+ L   D+ AL QL ++V   +E++ + +FFK    I R+   D S FY +  KDR
Sbjct: 725 QIPYESLRATDKIALSQLRSLVLACQEAFSNLEFFKAVTAINRWANADFSAFYIESIKDR 784

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           LY   T   +RR+ QT +      +  ++ P++P L E+ W++ P
Sbjct: 785 LYADSTDGLSRRAAQTTIFHIYSHLQSILGPLVPLLVEESWEHTP 829


>gi|392960483|ref|ZP_10325951.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
 gi|421054760|ref|ZP_15517725.1| isoleucyl-tRNA synthetase [Pelosinus fermentans B4]
 gi|421061531|ref|ZP_15523846.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans B3]
 gi|421066816|ref|ZP_15528370.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans A12]
 gi|421071623|ref|ZP_15532739.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans A11]
 gi|392440441|gb|EIW18121.1| isoleucyl-tRNA synthetase [Pelosinus fermentans B4]
 gi|392446888|gb|EIW24159.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans A11]
 gi|392449282|gb|EIW26411.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans B3]
 gi|392453096|gb|EIW30000.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans A12]
 gi|392455060|gb|EIW31867.1| Isoleucyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
          Length = 928

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/475 (44%), Positives = 292/475 (61%), Gaps = 35/475 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           Y  T++LP+T F MR N   REPE+   W   +++ +   + +   F+LHDGPPYANG++
Sbjct: 3   YSKTLNLPQTEFPMRGNLPEREPEMLNYWKQQKIYEKRTTQVEKPKFILHDGPPYANGDI 62

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKD+I +YK L+ +   YVPGWD HGLPIE   ++ L  + + +L P  LR
Sbjct: 63  HIGHALNKILKDMILKYKSLRGFNTPYVPGWDTHGLPIEHAAIKILGLN-RHELKPLDLR 121

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            +   +A   V  Q   FKR G+ ADW+NPY+TL P YEA QIEVFG+M+ +G+IY+G K
Sbjct: 122 RECKDYALKFVDTQRQDFKRLGIGADWDNPYVTLRPVYEAKQIEVFGEMAKKGHIYKGLK 181

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
            V+W  S  TALAEAE+EY E   S +IY  F +V    +    +N    ++   +WTTT
Sbjct: 182 SVYWCTSCETALAEAEIEYAEKK-SHTIYVKFPLVDDKGTLPVGINA--ENVYGVIWTTT 238

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN A+AV+ +L+YA VE Q                 G +     ++   VA D  
Sbjct: 239 PWTMPANVAIAVHPELEYAWVESQ-----------------GEIYLLAVELIEAVAKD-- 279

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
             LE+       I  TL G+DLE   + HP   R+  +V+  DY+T E GTG VHTAPGH
Sbjct: 280 NKLES-----YTILSTLKGADLEGVVFSHPFIERESIIVLA-DYVTLEQGTGCVHTAPGH 333

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           G +D+ T +++GLPI++PVD  G+FT E G F G+ ++ D +V V+K L  +  L+ +  
Sbjct: 334 GPDDFETGIRHGLPIINPVDHAGRFTAEGGIFEGM-LIHDADVPVIKELAARGMLLGKGK 392

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGAD 580
            +H+Y + WR K P I+RATEQWFASV+GFR+ A+ AI  V+W+     PG+G D
Sbjct: 393 IKHQYAHCWRCKNPVIYRATEQWFASVDGFREQALQAIKDVQWI-----PGWGED 442



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 136/212 (64%), Gaps = 9/212 (4%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    ++G V  + PQ+    YGAD+LRLWV+S DY  DV +   +L+Q+S++YR
Sbjct: 593 VDGDGRKMSKSVGNV--IFPQDVIKKYGADILRLWVASADYQADVRVSNDILKQLSEVYR 650

Query: 611 KLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T RY+LG++HD+    + + Y++L  ID++AL +LE + + + ++YE Y+F  I+ 
Sbjct: 651 KIRNTFRYILGSIHDFNPDTDRVGYNELLEIDRWALLRLEQVREKVTKAYEEYEFHLIYH 710

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  VDLS+ Y D+ KDR+YT    S  RR+ QTV+   + ++VR+I+P+L   AE+
Sbjct: 711 TVHNFCTVDLSSIYLDILKDRVYTALPASKERRAAQTVMYELVSTLVRLISPVLTFTAEE 770

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKW 761
           VWQ++      ++ +  E V  + WP++ +++
Sbjct: 771 VWQHMK-----QEQNMPESVQLADWPMVHDEY 797


>gi|314936645|ref|ZP_07843992.1| isoleucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313655264|gb|EFS19009.1| isoleucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 916

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/461 (45%), Positives = 285/461 (61%), Gaps = 39/461 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + W+ +  + +  +KN+G ++F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPKIQEQWEANNHYQKALEKNEGNQSFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKI+KDII RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKIIKDIIVRYKTMQGFYSPYVPGWDTHGLPIE-QALTKKGVDRKK-MSIAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   V+ Q   FKR GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQVELQKQDFKRLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +      + G ++E   D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDSKGTIDE---DAQFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+  L+Y    +                          K ++I  +  
Sbjct: 233 TPWTLPSNVAITVHPDLKYGQYNVNG------------------------KKYVIAEALA 268

Query: 405 VPTLEA-KWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
               EA  W    + ++K   G +LE     HP  +R   +VI G ++TT++GTG VHTA
Sbjct: 269 ESVSEALGWDKDTIQLEKEFTGKELEYVETQHPFIDR-VSLVINGGHVTTDAGTGCVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DYV   KY LP++SP+DD+G FTEE G+F G+      N AV   L ++ +L+ 
Sbjct: 328 PGHGEDDYVVGQKYDLPVISPLDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTDKGALLK 386

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
            +   H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 387 LDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDILDAI 427



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 120/202 (59%), Gaps = 4/202 (1%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPNQVVKQKGADIARLWVSSTDYLAD 630

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 653
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +S+   +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDFNPETDSVPEHELLEVDRYLLNRLREFTA 690

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           +    Y+++ +  I+Q +Q FI V+LSNFY D  KD LY     +  RRS QTVL   L+
Sbjct: 691 STINHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQKDAHKRRSMQTVLYQILV 750

Query: 714 SIVRVIAPILPHLAEDVWQNLP 735
            + +++APIL H AE+VW + P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772


>gi|345021941|ref|ZP_08785554.1| isoleucyl-tRNA synthetase [Ornithinibacillus scapharcae TW25]
          Length = 918

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/470 (44%), Positives = 289/470 (61%), Gaps = 44/470 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N   +EP   + W+   ++ +  ++  G   F+LHDGPPYANG+
Sbjct: 3   YKETLLMPKTDFPMRGNLPNKEPVRQEQWEQANLYEKTLERTKGRPLFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK+LKD I RYK +  +   Y+PGWD HGLPIE  + ++   D KK ++ ++ 
Sbjct: 63  IHIGHALNKVLKDFITRYKSMTGFHAPYIPGWDTHGLPIESALTKNKKVDRKK-MSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   V  Q   FK+ GV ADWNNPY+TL  +YEAAQI VFG+M+ QGYIY+G 
Sbjct: 122 RKLCEEYALTQVDGQRKQFKQLGVRADWNNPYITLTKDYEAAQIRVFGEMAKQGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG--LAVW 342
           KPV+WSPSS +ALAEAE+EY +   S SI+  F +        G+L     D G  + +W
Sbjct: 182 KPVYWSPSSESALAEAEIEYYDKR-SASIFVAFEVADG----KGVL-----DTGDKIIIW 231

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  ++V+    Y VV                     NV +D      +VA 
Sbjct: 232 TTTPWTLPANLGISVHPDYNYVVV---------------------NVNQDN----FVVAE 266

Query: 403 DLVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           DL+ ++  E +W T  VI KT  G +L+     HP  +R+  V++ GD++TT++GTGLVH
Sbjct: 267 DLLESITQELEWDTPQVI-KTFKGKELDRVTAKHPFYDRESLVML-GDHVTTDAGTGLVH 324

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG++D+  S KY L +L PVD++G FT EA  F GL    D N  + + L E  +L
Sbjct: 325 TAPGHGEDDFYVSAKYNLDVLCPVDEKGVFTSEAPGFEGL-FYDDANKVITEKLQETGAL 383

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +      H YP+DWRTKKPTIFRAT QWFAS++ FR+  ++ I +VKW P
Sbjct: 384 LKLNIITHSYPHDWRTKKPTIFRATAQWFASIKDFREDILNEIKEVKWYP 433



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 115/185 (62%), Gaps = 2/185 (1%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 611
           ++G  +    ++G V  VP +     GAD+LRLWV+SVDY  DV I   +L+Q S+ YRK
Sbjct: 588 LDGNGRKMSKSLGNVM-VPSKVQKQLGADILRLWVASVDYQADVRISDDILKQTSEAYRK 646

Query: 612 LRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 670
           +R T R+LL NL D+    + ++  DL  +D+Y L +L+ +V+++RESYE Y+F  IF  
Sbjct: 647 IRNTFRFLLANLADFNPETDRVAERDLEEVDRYMLHRLQILVQDVRESYEKYEFSPIFHR 706

Query: 671 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
           I  F   DLS+FY D AKD LY        RRS QT     L ++V+++ PI+PH A++V
Sbjct: 707 IHNFCADDLSSFYLDFAKDILYIEAADHHRRRSIQTGYYEILTTLVQLLTPIIPHTADEV 766

Query: 731 WQNLP 735
           W+ +P
Sbjct: 767 WEYIP 771


>gi|222836391|gb|EEE74798.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 225/585 (38%), Positives = 330/585 (56%), Gaps = 60/585 (10%)

Query: 192 YVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWAD 251
           YVPGWDCHGLPIELKV + L     + ++ ++ R     +AK  V+ Q A F R GV  D
Sbjct: 13  YVPGWDCHGLPIELKV-EGLVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGVLGD 71

Query: 252 WNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSR 311
           W+NPYLT++ E EA  I   G++   G++Y+G KPVHW     ++LAEAE+EY E  VS 
Sbjct: 72  WDNPYLTMNFETEAEIIRTLGKVIQNGHLYKGSKPVHWCLDCASSLAEAEVEY-EDKVSP 130

Query: 312 SIYAVFRMVSAPPSTSGL--LNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQ 369
           SIY  F  VSA         L +    L   +WTTTPWT+P+N A+AVNA+L+Y +V++ 
Sbjct: 131 SIYVRFAAVSAAEVEEKFNALGKGQGALSAVIWTTTPWTLPSNRAIAVNAELEYQLVQL- 189

Query: 370 SLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV-IKKTLAGSDLE 428
                      N++              +I+A++LV T++   G + + I  +  G DLE
Sbjct: 190 ----------GNER--------------VILATELVQTVQNALGIEQIQILGSAKGGDLE 225

Query: 429 NCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEG 488
             R+ HP  +   P+++ GD++T + GTGLVHTAP HGQ+D+V S KYGL +   V ++G
Sbjct: 226 LIRFNHPFYDFSVPMIL-GDHVTVDGGTGLVHTAPDHGQDDFVVSKKYGLEMAGLVANDG 284

Query: 489 KFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQW 548
           KF      F+G  V  + N  V++ L E  +L+  E  +H YP+ WR K P IFRAT QW
Sbjct: 285 KFISSTPFFAGKGVF-EANDLVLEKLKETGALLKLERIKHSYPHCWRHKTPIIFRATPQW 343

Query: 549 FASVE--GFRQAAMDAIGQVKWVPP----------QEAPGY----------GADVLRLWV 586
           F  +E    R  A+  I  V+W+P              P +          GAD+LRLWV
Sbjct: 344 FIGMETQDLRIKALSEIKSVRWIPSWGEARIDKMVANRPDWCISRQLWNKNGADILRLWV 403

Query: 587 SSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYAL 645
           +S DYTG++ +  ++L    D YR++R T R+LL NL+ +   N  ++ +++  +D++A+
Sbjct: 404 ASTDYTGEIAVSHKILNSAGDTYRRIRNTARFLLANLNGFDPKNDLVNPEEMISLDRWAV 463

Query: 646 FQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQ 705
                    I+E+Y++YQF  + Q + RF  +++ +FY D+ KDR YT    S  RRSCQ
Sbjct: 464 SCALEAQNEIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTKADSLARRSCQ 523

Query: 706 TVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
           T L     ++VR IAPIL   A+++W  LP     +  + AEFVF
Sbjct: 524 TALWHISEALVRWIAPILSFTADEIWGYLP-----KLDNRAEFVF 563


>gi|414074888|ref|YP_007000105.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           UC509.9]
 gi|413974808|gb|AFW92272.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           UC509.9]
          Length = 932

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/470 (44%), Positives = 293/470 (62%), Gaps = 41/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MRA    +EP   K W D  ++ +  + N+G+ +F+LHDGPPYANG
Sbjct: 2   KIKDTLNLGKTAFPMRAGLPNKEPNWQKDWSDATLYEKRQELNEGKPSFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII RYK +  ++  YVPGWD HGLPIE ++ ++  +  + DL    
Sbjct: 62  NIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLPIEQQLAKAGMKRKEMDLL--D 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              +  K+A   V  Q + FK  GV ADW+ PYLTL PEYEAAQI VFG+M+ +GYIY+G
Sbjct: 120 YLEECRKYAMKQVDMQRSDFKSLGVLADWDRPYLTLLPEYEAAQIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           +KP++WSPSS ++LAEAE+EY +   S SI+  F+       T G L E   D+   +WT
Sbjct: 180 QKPIYWSPSSESSLAEAEIEYQDVR-SASIFVAFKA----KDTKGKLPE---DVEFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P+N  +  +    Y+VV +            N+K               ++AS+
Sbjct: 232 TTPWTIPSNLGIFAHPDYDYSVVAVN-----------NRK--------------FVIASE 266

Query: 404 LVPTLEAK--WGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++  +  K  W    V+ +TL GSDLE     HP  +R+  +++  DY+T +SGTGLVH 
Sbjct: 267 MLEAVAEKLEWENPEVL-QTLKGSDLEYMVAKHPFYDRET-LIMNADYVTLDSGTGLVHV 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY  S KY LP+LSP+D+ G +T+EA    G+    DGN  V  +L+E+ +L+
Sbjct: 325 APGHGEDDYFASRKYKLPVLSPIDNRGYYTDEAPGLEGV-FYDDGNKIVSNWLEEKDALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
             E + H YP+DWRTKKP IFRAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 384 KLEFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRQNILDEVEKVDWVIP 433



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 111/185 (60%), Gaps = 6/185 (3%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP      +GAD+LRLWV+S+D   DV +   +L Q+S++YRK+R TLR+L+ N  D+  
Sbjct: 603 VPKDVTKKFGADILRLWVASIDTESDVRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNP 662

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + I + +L  +D+Y L +   +VK I ++Y++Y F  +++ I  FI  DLS+FY D A
Sbjct: 663 KEDGIDFAELRPVDKYMLVKFNELVKQIHKAYDNYSFMSVYKSIINFITNDLSSFYLDFA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLED 742
           KD +Y     S  RRS QTV+   L  +V+V+ PILPH AE+ W  L      FAY  E 
Sbjct: 723 KDVVYIEAANSPERRSMQTVMYVILKDLVKVLVPILPHTAEETWTYLEHEPENFAYLAEM 782

Query: 743 GSAAE 747
             AAE
Sbjct: 783 PEAAE 787


>gi|116512741|ref|YP_811648.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|116108395|gb|ABJ73535.1| Isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 932

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/470 (44%), Positives = 293/470 (62%), Gaps = 41/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MRA    +EP   K W D  ++ +  + N+G+ +F+LHDGPPYANG
Sbjct: 2   KIKDTLNLGKTAFPMRAGLPNKEPNWQKDWSDATLYEKRQELNEGKPSFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII RYK +  ++  YVPGWD HGLPIE ++ ++  +  + DL    
Sbjct: 62  NIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLPIEQQLAKAGMKRKEMDLL--D 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              +  K+A   V  Q + FK  GV ADW+ PYLTL PEYEAAQI VFG+M+ +GYIY+G
Sbjct: 120 YLEECRKYAMKQVDMQRSDFKSLGVLADWDRPYLTLLPEYEAAQIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           +KP++WSPSS ++LAEAE+EY +   S SI+  F+       T G L E   D+   +WT
Sbjct: 180 QKPIYWSPSSESSLAEAEIEYQDVR-SASIFVAFKA----KDTKGKLPE---DVEFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P+N  +  +    Y+VV +            N+K               ++AS+
Sbjct: 232 TTPWTIPSNLGIFAHPDYDYSVVAVN-----------NRK--------------FVIASE 266

Query: 404 LVPTLEAK--WGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++  +  K  W    V+ +TL GSDLE     HP  +R+  +++  DY+T +SGTGLVH 
Sbjct: 267 MLEAVAEKLEWENPEVL-QTLKGSDLEYMVAKHPFYDRET-LIMNADYVTLDSGTGLVHV 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY  S KY LP+LSP+D+ G +T+EA    G+    DGN  V  +L+E+ +L+
Sbjct: 325 APGHGEDDYFASRKYKLPVLSPIDNRGYYTDEAPGLEGV-FYDDGNKIVSNWLEEKDALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
             E + H YP+DWRTKKP IFRAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 384 KLEFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRQNILDEVEKVDWVIP 433



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 111/185 (60%), Gaps = 6/185 (3%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP      +GAD+LRLWV+S+D   DV +   +L Q+S++YRK+R TLR+L+ N  D+  
Sbjct: 603 VPKDVTKKFGADILRLWVASIDTESDVRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNP 662

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + I + +L  +D+Y L +   +VK I ++Y++Y F  +++ I  FI  DLS+FY D A
Sbjct: 663 KEDGIDFAELRPVDKYMLVKFNELVKQIHKAYDNYSFMSVYKSIINFITNDLSSFYLDFA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLED 742
           KD +Y     S  RRS QTV+   L  +V+V+ PILPH AE+ W  L      FAY  E 
Sbjct: 723 KDVVYIEAANSPERRSMQTVMYVILKDLVKVLVPILPHTAEETWTYLEHEPENFAYLAEM 782

Query: 743 GSAAE 747
             AAE
Sbjct: 783 PEAAE 787


>gi|289578630|ref|YP_003477257.1| isoleucyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528343|gb|ADD02695.1| isoleucyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 932

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/468 (44%), Positives = 302/468 (64%), Gaps = 34/468 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y  T++LPKT F M+AN   REPEI K W++  ++ +  +KN G E ++LHDGPPYANG+
Sbjct: 3   YNKTLNLPKTDFPMKANLPTREPEILKRWEEMDIYHKTLEKNKGKEKYILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A+NK+LKDII +YK ++ Y   YVPGWD HGLPIE + +++L    + +++P++ 
Sbjct: 63  IHIGTAMNKVLKDIIVKYKTMRGYYAPYVPGWDTHGLPIEQQAIKTLG-IKRHEVSPTEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     FA + ++ Q A FKR GV  DW+NPYLTL+PEYEA QIEVFG+M+ +GYIY+G 
Sbjct: 122 RKVCKDFAFSQIEKQKAQFKRLGVRGDWDNPYLTLNPEYEAKQIEVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W PS  TALAEAE+EY +   S SIY  FR+        G++++ L ++   +WTT
Sbjct: 182 KPVYWCPSCETALAEAEIEYFD-ETSDSIYVKFRVKDDLGKFKGIVDD-LNNVYFVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           T WT+PAN A+A+N +  YA+ +      GD                       IVA D+
Sbjct: 240 TTWTIPANLAIALNPEFDYALAQF-----GDE--------------------IYIVAKDM 274

Query: 405 VPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           + T+  EA  G   ++     G DLE  + +HP+ +R   +VI G+++T E+GTG VHTA
Sbjct: 275 LDTVKKEAHLGDYEIV-AVFKGKDLEGIKALHPIYDRDS-LVILGEHVTLEAGTGCVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG+ED++   +YGL +L+P+DD+G FT++A  ++GL    + N  + + L +  +L+ 
Sbjct: 333 PGHGEEDFLVGQEYGLEVLNPIDDKGYFTDKAPGYAGL-YYEEANKVIKEDLKKANALVA 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E    H YP+ WR K P IFRATEQWFASVEGFR+ A+ +I +V W P
Sbjct: 392 ESHITHSYPHCWRCKSPIIFRATEQWFASVEGFRKEALKSIKEVNWYP 439



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 127/204 (62%), Gaps = 9/204 (4%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+    + + Y+
Sbjct: 618 YGADILRLWTVSADFTSDMRISKEILKQMTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYE 677

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  ID++AL++L  +V+ + E+++ Y+++    ++  F +VD+S+ Y D+ KDRLYT  
Sbjct: 678 ELLEIDKWALYRLNRVVEELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYP 737

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG-SAAEFVFESKW 754
             S  RR+ QT L   L ++VR+IAP+L   +E++W     +Y   D  +  E V  + W
Sbjct: 738 AASKERRAAQTTLYIILDTLVRLIAPVLTFTSEEIW-----SYMKHDSQNNFESVQLADW 792

Query: 755 PVLDEKWRTFPVGEIYFWGKILEV 778
           P + EK+    +  I  W K+ ++
Sbjct: 793 PEVQEKYNNPYI--IEKWEKLFDI 814


>gi|293560464|ref|ZP_06676956.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|314937861|ref|ZP_07845177.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a04]
 gi|314941352|ref|ZP_07848245.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133C]
 gi|314951348|ref|ZP_07854402.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133A]
 gi|314992821|ref|ZP_07858222.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133B]
 gi|314997981|ref|ZP_07862876.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a01]
 gi|424971989|ref|ZP_18385386.1| isoleucine--tRNA ligase [Enterococcus faecium P1139]
 gi|424977781|ref|ZP_18390766.1| isoleucine--tRNA ligase [Enterococcus faecium P1123]
 gi|425036630|ref|ZP_18441372.1| isoleucine--tRNA ligase [Enterococcus faecium 514]
 gi|425043082|ref|ZP_18447351.1| isoleucine--tRNA ligase [Enterococcus faecium 511]
 gi|425048716|ref|ZP_18452607.1| isoleucine--tRNA ligase [Enterococcus faecium 509]
 gi|291605612|gb|EFF35054.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313587993|gb|EFR66838.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a01]
 gi|313592625|gb|EFR71470.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133B]
 gi|313596565|gb|EFR75410.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133A]
 gi|313599775|gb|EFR78618.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133C]
 gi|313642719|gb|EFS07299.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a04]
 gi|402956928|gb|EJX74351.1| isoleucine--tRNA ligase [Enterococcus faecium P1139]
 gi|402964523|gb|EJX81297.1| isoleucine--tRNA ligase [Enterococcus faecium P1123]
 gi|403014171|gb|EJY27189.1| isoleucine--tRNA ligase [Enterococcus faecium 514]
 gi|403021321|gb|EJY33788.1| isoleucine--tRNA ligase [Enterococcus faecium 511]
 gi|403030031|gb|EJY41751.1| isoleucine--tRNA ligase [Enterococcus faecium 509]
          Length = 932

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 295/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++++++ +  + N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENRIYQKRQELNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ + YIY+G
Sbjct: 120 YLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKSYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +         +L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++++ G   + + K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|404418423|ref|ZP_11000190.1| isoleucyl-tRNA ligase [Staphylococcus arlettae CVD059]
 gi|403489016|gb|EJY94594.1| isoleucyl-tRNA ligase [Staphylococcus arlettae CVD059]
          Length = 916

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 211/462 (45%), Positives = 288/462 (62%), Gaps = 41/462 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKND-GENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD   ++ +   +N+   +++LHDGPPYANG+
Sbjct: 3   YKETLLMPKTAFPMRGGLPNKEPKIQEQWDQQNIYQKALQQNEENPSYILHDGPPYANGS 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           LHMGHALNKILKDII RYK +Q +   YVPGWD HGLPIE    Q+L +    +K+++ S
Sbjct: 63  LHMGHALNKILKDIITRYKTMQGFYTPYVPGWDTHGLPIE----QALAKKGVKRKEMSIS 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
             R K   FA   ++ Q   FKR GV  D+NNPY+TL PEYEAAQ+ +FG+M+ +G IY+
Sbjct: 119 DFRKKCEAFALEQIELQKKDFKRLGVKGDFNNPYITLKPEYEAAQLRLFGEMADKGLIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           GKKPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +W
Sbjct: 179 GKKPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDVKDG----KGIVDN---DAKFIIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+ V+  L YA    Q  + G+             V KD       + S
Sbjct: 231 TTTPWTLPSNVAITVHPDLTYA----QYKVNGEKYI----------VGKD-------LIS 269

Query: 403 DLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           D+V  LE  W   ++ ++K   GS+LE     HP  +R   VVI G ++TT++GTG VHT
Sbjct: 270 DVVNQLE--WDENEIELEKEFRGSELEYVEAQHPFMDR-TSVVINGTHVTTDAGTGCVHT 326

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY+   KY LP++SPV+D+G FTEEAG+F GL      N  +   L E+ +L+
Sbjct: 327 APGHGEDDYIVGQKYNLPVISPVNDKGVFTEEAGQFEGL-FYDKANKEITDLLKEKHALL 385

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
             E   H YP+DWRTKKP IFRAT QWFAS++  R   + A+
Sbjct: 386 KLEFITHSYPHDWRTKKPVIFRATPQWFASIDKVRSDILAAV 427



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/200 (42%), Positives = 122/200 (61%), Gaps = 7/200 (3%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP Q     GAD+ RLWVSSVDY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQIVKQKGADIARLWVSSVDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNVNDFNP 664

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +++   +L  IDQY L +L     +  E Y+++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 ETDALPETELLEIDQYLLNRLREFTASTIEHYDNFDYLDIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG---S 744
           KD LY     +  RRS QTVL   ++ + +++APIL H AE+VW ++P  +  E+    +
Sbjct: 725 KDILYIEAQDAHKRRSMQTVLYQIIVDMTKLLAPILAHTAEEVWSHIP--HVKEESVHLT 782

Query: 745 AAEFVFESKWPVLDEKWRTF 764
               V E    +L EKW TF
Sbjct: 783 RMPEVVEVNHEIL-EKWNTF 801


>gi|344996023|ref|YP_004798366.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|343964242|gb|AEM73389.1| Isoleucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 920

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/473 (44%), Positives = 299/473 (63%), Gaps = 44/473 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +  T++LPKT F MRAN   RE +  K W ++ +F ++ DKN + + F+LHDGPPYANG+
Sbjct: 3   WSQTLNLPKTDFPMRANLAQRESQFLKFWQENDIFKKMLDKNKNNKKFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK+LKDI+N+YK LQ Y   Y+PGWD HGLPIE +V++    + + ++ P + 
Sbjct: 63  IHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQVIKKFGVN-RHEVDPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   +  Q   FKR GV+ +W NPY+TLDP++EA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKKCKEFALNYIDIQREQFKRLGVFGEWENPYMTLDPKFEARQIRVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP----DLGLA 340
           KPV+W PS  TALAEAE+EY E   + SIY  F ++       GL +  LP     + + 
Sbjct: 182 KPVYWCPSCETALAEAEIEYQEDR-TYSIYVKFEVI----DDKGLFSN-LPIGDKKVYIV 235

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTT WT+P N A+A+NA   Y++V+I                  GN +       ++V
Sbjct: 236 IWTTTTWTLPGNLAIALNADFDYSLVDI------------------GNEI-------LVV 270

Query: 401 ASDLVPTLEAKWGTKLVIKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           AS+LV  +      K+   + +A   G DLE  +  HP  +R   +VI G+++T E+GTG
Sbjct: 271 ASELVERVMKT--NKIEQYQEIARFKGKDLEYVKCKHPFLDRS-SLVILGEHVTLEAGTG 327

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
            VHTAPGHG+ED+    +Y +P++ PVD++G  T+EAGKF+GL    D N  + K L+  
Sbjct: 328 CVHTAPGHGEEDFEVCQRYNIPVIVPVDNKGYLTKEAGKFAGL-FYEDSNKEIAKELEAS 386

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             L+  E   H+YP+ WR K P IFRATEQWFASV+GFR+ A+ A+  VKWVP
Sbjct: 387 GHLLGVEKITHQYPHCWRCKNPVIFRATEQWFASVKGFREEALKAVDDVKWVP 439



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 85/211 (40%), Positives = 137/211 (64%), Gaps = 13/211 (6%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           +GAD+LRLW  S DYT D+ I  ++++Q+++IYRK+R T R+LLGNL+D+    + + Y+
Sbjct: 619 FGADILRLWCVSADYTTDMRISKEIIKQLTEIYRKIRNTARFLLGNLYDFNPKTDKVGYE 678

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           DL  ID++AL +L  +++ + ++YE Y + +++ ++  F ++D+SN Y D+ KDRLY   
Sbjct: 679 DLKEIDRWALQRLYMLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASK 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
           + S  RRS QTV+   L+++ ++IAPIL   AE+VWQN+  A+  ED   AE VF + WP
Sbjct: 739 SESLDRRSAQTVMYEILVALTKLIAPILSFTAEEVWQNI--AFKEED---AESVFLTSWP 793

Query: 756 VLDE---KWRTFPVGEIYFWGKILEVIVVVT 783
            ++E   K  T        W KI+E+  +V 
Sbjct: 794 KVNEGILKDETLREK----WNKIIEIKDIVA 820


>gi|6137708|pdb|1QU2|A Chain A, Insights Into Editing From An Ile-Trna Synthetase
           Structure With Trna(Ile) And Mupirocin
 gi|6137710|pdb|1QU3|A Chain A, Insights Into Editing From An Ile-Trna Synthetase
           Structure With Trna(Ile) And Mupirocin
 gi|10121057|pdb|1FFY|A Chain A, Insights Into Editing From An Ile-Trna Synthetase
           Structure With Trna(Ile) And Mupirocin
          Length = 917

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 205/459 (44%), Positives = 281/459 (61%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y+ T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YEKTLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFNV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI GD++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEWVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   +Y LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQQYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAI 427



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 119/199 (59%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDDYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|425007881|ref|ZP_18418996.1| isoleucine--tRNA ligase [Enterococcus faecium ERV1]
 gi|402994306|gb|EJY08849.1| isoleucine--tRNA ligase [Enterococcus faecium ERV1]
          Length = 932

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 295/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++++++ +  + N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENRIYQKRQELNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q A FKR GV  DW +PY+TLDP Y AAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYGAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +         +L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++++ G   + + K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|392394891|ref|YP_006431493.1| isoleucyl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC
           51507]
 gi|390525969|gb|AFM01700.1| Isoleucyl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC
           51507]
          Length = 922

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/466 (42%), Positives = 289/466 (62%), Gaps = 36/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y++T++LP+T F MR N   REPEI + W++  ++  V     G   FVLHDGPPYANG+
Sbjct: 3   YRNTLNLPETDFPMRGNLPQREPEILQKWEEEDIYATVQKARAGRPKFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK++KDII +YK +  +   YVPGWD HGLPIE +V++ L  + +  ++  + 
Sbjct: 63  IHLGHALNKVIKDIIVKYKTMAGFDAPYVPGWDTHGLPIEQQVIKKLGVN-RHSVSVVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++AK  +  Q   FKR GV  DW NPY+TL+ EYEAAQI VFG+M+ + YIY+G 
Sbjct: 122 RRMCKEYAKKYIGIQREQFKRLGVRGDWKNPYITLEKEYEAAQIGVFGKMARKKYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W PS  TALAEAE+EY E   S +IY  F +        G+L +   +  + +WTT
Sbjct: 182 KPVYWCPSCETALAEAEIEYAE-KTSDAIYVKFPVKEG----KGVLTD--ENTFVIIWTT 234

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+ ++ +  YA V+++                         K   IVA  +
Sbjct: 235 TPWTLPANLAITLHGEFSYAQVQVE-------------------------KEHWIVAEGM 269

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           + +L + W  +L ++K   G +LE     HP   R   V+I G+++T E+GTG VHTAPG
Sbjct: 270 LESLRSLWQLELPVEKRFVGKELEGVICKHPFIERDS-VLILGEHVTLEAGTGCVHTAPG 328

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++D+    +YGLP+L PVD +GKFT E G ++G+ V    N  +++ L    +L+ E+
Sbjct: 329 HGEDDFNVGKEYGLPVLCPVDHQGKFTAEGGAYAGMKV-DKANPVIIEDLRSLNALVHED 387

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             +H Y + WR   P I+RATEQWFAS++GFR+AA++ I +V+W+P
Sbjct: 388 KIKHSYAHCWRCNNPIIYRATEQWFASIDGFRKAALEEIDKVQWIP 433



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 109/167 (65%), Gaps = 1/167 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P Q     GAD+LRLWV + DY  DV + P++++QMS+ YRK+R TLR+LL NL+D+   
Sbjct: 605 PLQVTKEMGADILRLWVCAADYKNDVAVSPRIMKQMSEAYRKIRNTLRFLLSNLNDFDPT 664

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + + Y DLP ID++AL QL  + + + + YE Y+F  ++  +  F  V+LS  Y D+ K
Sbjct: 665 KDRVDYKDLPEIDRWALLQLGKVTERVLQGYEKYEFHWVYHTVHNFCAVELSAIYLDIVK 724

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           DRLY  G  S  RR+ QTVL   L ++VR+IAP+L + A+++W  +P
Sbjct: 725 DRLYVEGKNSTLRRASQTVLYDVLNALVRLIAPVLTYTADEIWSYVP 771


>gi|257893530|ref|ZP_05673183.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|257829909|gb|EEV56516.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
          Length = 930

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 207/467 (44%), Positives = 294/467 (62%), Gaps = 39/467 (8%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGNL 165
           K T+ L KT F MR N   RE E  K W++++++ +  + N+G+ +FVLHDGPPYANGN+
Sbjct: 2   KETLQLGKTKFPMRGNLPNREGEWQKEWEENRIYQKRQELNEGKPSFVLHDGPPYANGNI 61

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++  
Sbjct: 62  HLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAEYL 119

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            K  ++A + V  Q A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ + YIY+G K
Sbjct: 120 EKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKSYIYKGLK 179

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           P++WSPSS ++LAEAE+EY +   S SI+  F +         +L+E   D    +WTTT
Sbjct: 180 PIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWTTT 231

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN  +AVN K  Y +VE                        D +K   +VA DL+
Sbjct: 232 PWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKDLL 266

Query: 406 PTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
            T++++ G   + + K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTAPG
Sbjct: 267 ETVQSEIGWENVTVLKEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTAPG 325

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+  +
Sbjct: 326 HGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLKLD 384

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 385 FFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVEWVIP 431



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 602 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 661

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 662 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 721

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 722 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 768


>gi|425046435|ref|ZP_18450451.1| isoleucine--tRNA ligase [Enterococcus faecium 510]
 gi|403024298|gb|EJY36468.1| isoleucine--tRNA ligase [Enterococcus faecium 510]
          Length = 932

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 206/469 (43%), Positives = 293/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++++++ +  + N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREGEWQKEWEENRIYQKRQELNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVPGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ + YIY+G
Sbjct: 120 YLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKSYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +           + F  D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDGK-------DIFDEDTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++++ G   + + K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|4836216|gb|AAD30388.1|AF096862_2 isoleucyl-tRNA synthase [Fervidobacterium pennivorans DSM 9078]
          Length = 897

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/516 (41%), Positives = 299/516 (57%), Gaps = 62/516 (12%)

Query: 119 MRANALVREPEIHKLWDDHQVFLRVAD-KNDGENFVLHDGPPYANGNLHMGHALNKILKD 177
           M+AN + +EPE+ K W++ +++ +  + + +   ++LHDGPPYANG++H+G A+NKILKD
Sbjct: 1   MKANLVNKEPEMLKFWEEKEIYKKTLETRANAPTYLLHDGPPYANGDIHLGTAMNKILKD 60

Query: 178 IINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVK 237
            + RYK ++ Y+V +VPGWD HGLPIE +V  SL E+AKK  +P+++R    +FA   V 
Sbjct: 61  FVTRYKTMRGYRVPFVPGWDTHGLPIEHRVTTSLGEEAKKK-SPAEIRKLCKEFALKYVD 119

Query: 238 AQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTAL 297
            Q   FKR GV  DW +PY+TLDP+YE   ++VF  +   G +YRG KPV+W P+ RTAL
Sbjct: 120 IQREEFKRLGVKGDWEHPYITLDPDYEYHILDVFKTLVENGNVYRGNKPVYWCPTCRTAL 179

Query: 298 AEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAV 357
           AEAE+EY + H S SIY  F+MV              PD  + +WTTTPWT+PAN A+A+
Sbjct: 180 AEAEIEYHD-HESPSIYVKFQMVDK------------PDTYIVIWTTTPWTIPANVAIAL 226

Query: 358 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLV 417
           +    Y  +++                          + + IVA  L+    A  G    
Sbjct: 227 HPDYTYVKIKVD-------------------------EEYWIVAEGLLQKFAADVGIDFE 261

Query: 418 IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG 477
           + +   G +LE     HP+ +R   VV+  DY+T E GTG VHTAPGHG+EDY T LKY 
Sbjct: 262 VVEKFVGKELEGKLTKHPLYDRTS-VVVLADYVTLEDGTGCVHTAPGHGEEDYQTGLKYN 320

Query: 478 LPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 537
           LP+LSPVDDEG+FT+EAGK+ GL +  D N  +V+ L    SLI      H YP+ WR K
Sbjct: 321 LPVLSPVDDEGRFTKEAGKYEGLKIW-DANKVIVEDLKNNGSLIKAGKISHSYPHCWRCK 379

Query: 538 KPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPP----------QEAPGYGADVLRLW 585
            P +FRAT QWF SV+    R   ++ I +VKW P           QE P +     R+W
Sbjct: 380 GPVMFRATPQWFISVDKNNLRGKVLEEIKKVKWYPAWGETRITAMVQERPDWTISRQRVW 439

Query: 586 ------VSSVDYTGDVMIGPQVLRQMSDIYRKLRGT 615
                 V   D  G+V + P+V+   ++I ++ +GT
Sbjct: 440 GVPIPAVKCKD-CGEVTLEPKVIEHFANIVKE-KGT 473



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 104/163 (63%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +    YGAD+LRLWV+S D+  ++ +G  ++ Q  ++YRKLR TLRYLL NL+D+   
Sbjct: 586 PMEIVNKYGADILRLWVASTDFFDNIRVGKNIIEQQVEVYRKLRNTLRYLLSNLYDFTEA 645

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
           + + Y+ L  +D++AL +L+  ++ I + YE +++ K++    ++   +LS  Y D+ KD
Sbjct: 646 DLLPYEKLLPLDKWALGRLQKFIEQITQYYEGFEYSKVYNATVKYCTTELSAVYLDILKD 705

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQ 732
           RLY     S  RRS QT L   L ++++++API+P  AE+ +Q
Sbjct: 706 RLYVEAKDSIYRRSAQTALHYILEALIKILAPIIPFTAEEAYQ 748


>gi|323141827|ref|ZP_08076692.1| isoleucine--tRNA ligase [Phascolarctobacterium succinatutens YIT
           12067]
 gi|322413698|gb|EFY04552.1| isoleucine--tRNA ligase [Phascolarctobacterium succinatutens YIT
           12067]
          Length = 929

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 217/474 (45%), Positives = 282/474 (59%), Gaps = 43/474 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y  T++LP+T F MRA    REP+  K W+++ ++ +    + G + FVLHDGPPYANG 
Sbjct: 3   YGKTLNLPETEFPMRAGLPQREPDFLKFWEENDIYGKKQALHAGHKKFVLHDGPPYANGK 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKDII +YK  + +   YVPGWD HG+PIE   ++ L  + + +L P  L
Sbjct: 63  IHMGHALNKILKDIIMKYKYARGFDTPYVPGWDTHGMPIEHAAIKELGLN-RNELDPLTL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   FA   V  Q   FKR GV  DW NPY+TL   +EA QI VFG M+ +GYIY+GK
Sbjct: 122 RRKCHDFALQWVDIQREDFKRLGVLGDWENPYITLHHSFEAEQIRVFGTMANKGYIYKGK 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMV----SAPPSTSGLLNEFLPDLGLA 340
           K V+W P   TALAEAE+EY E   + +I+    +V      P +  G          + 
Sbjct: 182 KTVYWCPHCETALAEAEIEYGE-QKTPTIFVKMPLVKDNGQTPEAAKG------KKAYMV 234

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AVA+N  L+YA VE +                 G VL   K +   V
Sbjct: 235 IWTTTPWTMPANVAVALNPALEYAWVECE-----------------GEVLFMAKDLLAQV 277

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPV---DNRQCPVVIGGDYITTESGTG 457
            +     L    GT L       G D+E    VHP    +NR+  VV+  DY+TTE+GTG
Sbjct: 278 GAVCHKDLSNILGTTL-------GKDMEFAECVHPFPEYNNRRSLVVM-ADYVTTEAGTG 329

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDE 516
            VHTAPGHG  D+ T LKY LPIL PVD +GK TEEAG +F G+ V  D N+ V+KYL E
Sbjct: 330 CVHTAPGHGDVDFETGLKYKLPILCPVDSQGKLTEEAGERFKGMFVF-DANIPVLKYLAE 388

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              L+ +E  +H+Y + WR K P IFRAT QWFAS++GFR  A+ +I  V+W+P
Sbjct: 389 LNCLLGKENIKHQYAHCWRCKNPIIFRATSQWFASIDGFRDEALKSIDDVQWIP 442



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 128/211 (60%), Gaps = 7/211 (3%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 611
           V+G  +    ++G V  VP      YGAD++RLW +S DY  D+ I P++L+Q++++YRK
Sbjct: 598 VDGDGRKMSKSVGNVI-VPQDVIKQYGADIIRLWTASSDYKADIRISPKILKQLAEVYRK 656

Query: 612 LRGTLRYLLGNLHDWRV-GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 670
           +R T+RY+LGN +D+    +++ ++++  +DQ+AL  L+ + K +  +YESY F  ++  
Sbjct: 657 IRNTIRYILGNTNDFNYETDAVPFNEMLELDQWALMHLQLLKKEVTAAYESYDFHVLYHA 716

Query: 671 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
           I  F  V++S+FY D+ KDRLY     S  RRS QT +   L+ ++ +++P+L    E+V
Sbjct: 717 IHNFCTVEMSSFYLDILKDRLYAYKADSKERRSAQTAMHEILMDLIVMLSPVLSFTMEEV 776

Query: 731 WQNLPFAYTLEDGSAAEFVFESKWPVLDEKW 761
           WQ     +  +  +A E V    WP + E++
Sbjct: 777 WQ-----FMKKSANAPESVQMLPWPEVKEEY 802


>gi|325571365|ref|ZP_08146865.1| isoleucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325155841|gb|EGC68037.1| isoleucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 931

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/470 (44%), Positives = 294/470 (62%), Gaps = 41/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE +  K W+++Q++ R  + N+G+  FVLHDGPPYANG
Sbjct: 2   KMKETLHLGKTAFPMRGNLPNREVDWQKEWEENQLYQRRQELNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHIGHSLNKISKDIIVRSKSMSGFRSPYVPGWDTHGLPIE-QVLTN-KGIKRKEMSLAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A   V  Q A FKR GV  DW++PY+TL P+YEAA+I VFG+M+ +GYIY+G
Sbjct: 120 YRKKCEEYALTQVDTQRADFKRLGVSGDWDHPYITLTPDYEAAEIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +         LL+    D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFPVADG----KDLLDS---DTSFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y                         +L D +K   +VA D
Sbjct: 232 TTPWTLPANLGISVNPTFAYV-----------------------QILADGRK--FVVAKD 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+ T+  E  W +  V+++ LAG  LE     HP  +R   +++ GD++T ++GTGLVHT
Sbjct: 267 LLETVTNEIGWESVEVLQE-LAGDQLEKMTAKHPFYDRTSLLML-GDHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY+ S KYGL +LSPVD  G FTEEA  F G+      N  + + L+E+ +L+
Sbjct: 325 APGHGEDDYIVSKKYGLDVLSPVDSRGVFTEEAPGFEGV-FYDKANPMITELLEEKGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
               + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D I +V W+ P
Sbjct: 384 KLNFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEIEKVDWIIP 433



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 105/159 (66%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVDY  DV +   +L Q+S++YRK+R T+R+LL N  D+    +S+ +++
Sbjct: 612 GADILRLWVSSVDYEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFDPAKDSVPFEN 671

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y + +L   +K IRE  YE Y F  I++ +  F+ VD+S+FY D AKD +Y   
Sbjct: 672 LRSVDKYMMVRLNQTIKTIREDGYEKYNFLHIYRTVINFLTVDMSSFYLDFAKDVVYIEA 731

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              F RR+ QTV     +++ +++ PI+PH AE++W +L
Sbjct: 732 ENDFQRRAMQTVFYQTAVALTKLLTPIIPHTAEEIWSHL 770


>gi|418637502|ref|ZP_13199821.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis VCU139]
 gi|374838748|gb|EHS02283.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis VCU139]
          Length = 916

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/465 (45%), Positives = 286/465 (61%), Gaps = 37/465 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +   KN G + ++LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPKKEPQIQEKWDADNQYQKALAKNKGNQTYILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKI+KD I RYK +Q Y   +VPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKIIKDFIVRYKTMQGYYAPFVPGWDTHGLPIE-QALTKKGVDRKK-MSIAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   V+ Q   FK  GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQVELQKKDFKSLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +      + G+++E   D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDSKGVVDE---DAQFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +             KK      L D+      VA  L
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG-----------KKYIIAEALADE------VAEAL 275

Query: 405 VPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
                  W    + ++K   G +LE     HP  +R   +VI G+++TT++GTG VHTAP
Sbjct: 276 ------DWDKNHIKLEKEFMGKELEYVEAQHPFLDR-VSLVINGNHVTTDAGTGCVHTAP 328

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++DY+   KYGLP++SP++D+G FTEE G+F G+      N AV   L E+ +L+  
Sbjct: 329 GHGEDDYIVGQKYGLPVISPLNDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKDALLKL 387

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
               H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI + ++
Sbjct: 388 SFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDILDAIEETEF 432



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 120/202 (59%), Gaps = 4/202 (1%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVK 653
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +++   DL  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNVNDFNPDTDAVLESDLLEVDRYLLNRLREFTA 690

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           +    Y+++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STIHHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEEKNSHKRRSMQTVLYQILV 750

Query: 714 SIVRVIAPILPHLAEDVWQNLP 735
            + +++APIL H AE+VW + P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772


>gi|289551024|ref|YP_003471928.1| Isoleucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|385784645|ref|YP_005760818.1| isoleucyl-tRNA synthetase [Staphylococcus lugdunensis N920143]
 gi|418414320|ref|ZP_12987535.1| isoleucyl-tRNA synthetase [Staphylococcus lugdunensis
           ACS-027-V-Sch2]
 gi|289180556|gb|ADC87801.1| Isoleucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|339894901|emb|CCB54202.1| isoleucyl-tRNA synthetase [Staphylococcus lugdunensis N920143]
 gi|410876927|gb|EKS24824.1| isoleucyl-tRNA synthetase [Staphylococcus lugdunensis
           ACS-027-V-Sch2]
          Length = 916

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/465 (45%), Positives = 286/465 (61%), Gaps = 37/465 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +   KN G + ++LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPKKEPQIQEKWDADNQYQKALAKNKGNQTYILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKI+KD I RYK +Q Y   +VPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKIIKDFIVRYKTMQGYYAPFVPGWDTHGLPIE-QALTKKGVDRKK-MSIAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   V+ Q   FK  GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQVELQKKDFKSLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +      + G+++E   D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDSKGVVDE---DAQFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +             KK      L D+      VA  L
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG-----------KKYIIAEALADE------VAEAL 275

Query: 405 VPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
                  W    + ++K   G +LE     HP  +R   +VI G+++TT++GTG VHTAP
Sbjct: 276 ------DWDKNHIKLEKEFMGKELEYVEAQHPFLDR-VSLVINGNHVTTDAGTGCVHTAP 328

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++DY+   KYGLP++SP++D+G FTEE G+F G+      N AV   L E+ +L+  
Sbjct: 329 GHGEDDYIVGQKYGLPVISPLNDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKDALLKL 387

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
               H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI + ++
Sbjct: 388 SFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDILDAIEETEF 432



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 120/202 (59%), Gaps = 4/202 (1%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVK 653
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +++   DL  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNVNDFNPDTDAVLESDLLEVDRYLLNRLREFTA 690

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           +    Y+++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STIHHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEEKNSHKRRSMQTVLYQILV 750

Query: 714 SIVRVIAPILPHLAEDVWQNLP 735
            + +++APIL H AE+VW + P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772


>gi|187607938|ref|NP_001120515.1| isoleucyl-tRNA synthetase 2, mitochondrial [Xenopus (Silurana)
           tropicalis]
 gi|170285160|gb|AAI61415.1| LOC100145647 protein [Xenopus (Silurana) tropicalis]
          Length = 992

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/502 (41%), Positives = 295/502 (58%), Gaps = 30/502 (5%)

Query: 78  CSSSKRRSRGPVMAA-KKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDD 136
           C    RR R  V AA +KA+  E     +Y+ TV LP T F +R           +L ++
Sbjct: 7   CRLPVRRYRWGVRAASEKASSNESPGNRKYRGTVLLPHTDFPIRRGPGETASTELRLQEE 66

Query: 137 H---QVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYV 193
               Q++    ++   + F LHDGPPYANG+ H+GHALNKILKDI NR+ +++ YKV YV
Sbjct: 67  SGFLQLYAWQRERKTKKEFSLHDGPPYANGDPHVGHALNKILKDITNRFHMMRGYKVSYV 126

Query: 194 PGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWN 253
           PGWDCHGLPIELK L  L E+A+ +++P+++R KA  FA+  ++ Q +SF R+G+ ADW+
Sbjct: 127 PGWDCHGLPIELKALAELGEEAE-NMSPTEIRRKAKMFAEKAIEKQKSSFIRWGIMADWD 185

Query: 254 NPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSI 313
             Y T DP+YEA Q+++F +M  +G+IY+  KPV WSPS+RTALAEAELEY + H+SRSI
Sbjct: 186 KCYYTFDPKYEAKQLDIFYKMYDKGHIYQDYKPVFWSPSTRTALAEAELEYNQEHISRSI 245

Query: 314 YAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLE 373
           +A F M  APP  + +++     +   VWTT PWT+PAN A+      +YA+ +  +  E
Sbjct: 246 FAKFPMHKAPPKLASIIDGS-SAVSTLVWTTQPWTIPANQAICYMPDTEYAIAKCANTGE 304

Query: 374 GDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYV 433
                                    I+A+D + +     GT+L +  T  G DLE    +
Sbjct: 305 Q-----------------------YILATDRIESTALSLGTQLQVISTFKGLDLEGGICL 341

Query: 434 HPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEE 493
           HP    +   ++  +++T   GTGLVHTAP HG EDY  +  + LP+   VD+ G FT  
Sbjct: 342 HPTIADRLSPLLPANHVTMAKGTGLVHTAPAHGIEDYSVASHHKLPVDCLVDESGHFTTG 401

Query: 494 AG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASV 552
           AG +     VL DGN  V++ L    SL+ EE + H YPYDWRTKKP I RA++QWF + 
Sbjct: 402 AGAELENKAVLTDGNETVIQMLHASKSLLKEESFVHSYPYDWRTKKPVIIRASKQWFVNT 461

Query: 553 EGFRQAAMDAIGQVKWVPPQEA 574
              +  A D + +VK+VP   A
Sbjct: 462 ANIKDKAQDVLKKVKFVPASAA 483



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/195 (42%), Positives = 117/195 (60%), Gaps = 7/195 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 633
           P YGADVLR WV+  +   +V+IGP VL    D   KLR TLR++LGNL D+    +S+ 
Sbjct: 666 PAYGADVLRWWVAESNVFTEVLIGPAVLNSARDDINKLRNTLRFMLGNLSDFTPERDSVP 725

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
             ++ +IDQY L  L++    + ++Y+ Y+F K+ ++++  +  DLS+FYF + KDRLY 
Sbjct: 726 STEMYVIDQYMLHILQDYGSKVTDAYKGYEFGKVVRLLEALVTRDLSSFYFSIIKDRLYC 785

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQTVL+  L  +VR  APILPHLAE+V+Q LP  Y  E  SA    F + 
Sbjct: 786 DEEKDPKRRSCQTVLAEALDVVVRSFAPILPHLAEEVFQYLP--YRKESDSA----FRTG 839

Query: 754 WPVLDEKWRTFPVGE 768
           W   +  W+   + E
Sbjct: 840 WIKPNTVWKKLGLVE 854


>gi|315658520|ref|ZP_07911392.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315496849|gb|EFU85172.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 916

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/465 (45%), Positives = 286/465 (61%), Gaps = 37/465 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +   KN G + ++LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPKKEPQIQEKWDADNQYQKALAKNKGNQTYILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKI+KD I RYK +Q Y   +VPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKIIKDFIVRYKTMQGYYAPFVPGWDTHGLPIE-QALTKKGVDRKK-MSIAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   V+ Q   FK  GV  D+NNPY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQVELQKKDFKSLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +      + G+++E   D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDSKGVVDE---DAQFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +             KK      L D+      VA  L
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG-----------KKYIIAEALADE------VAEAL 275

Query: 405 VPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
                  W    + ++K   G +LE     HP  +R   +VI G+++TT++GTG VHTAP
Sbjct: 276 ------DWDKNHIKLEKEFMGKELEYVEAQHPFLDR-VSLVINGNHVTTDAGTGCVHTAP 328

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++DY+   KYGLP++SP++D+G FTEE G+F G+      N AV   L E+ +L+  
Sbjct: 329 GHGEDDYIVGQKYGLPVISPLNDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKDALLKL 387

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
               H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI + ++
Sbjct: 388 SFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDILDAIEETEF 432



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 120/202 (59%), Gaps = 4/202 (1%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVK 653
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    +++   DL  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNVNDFNPDTDAVLESDLLEVDRYLLNRLREFTA 690

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           +    Y+++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STIHHYDNFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEEKNSHKRRSMQTVLYQILV 750

Query: 714 SIVRVIAPILPHLAEDVWQNLP 735
            + +++APIL H AE+VW + P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772


>gi|260804683|ref|XP_002597217.1| hypothetical protein BRAFLDRAFT_203583 [Branchiostoma floridae]
 gi|229282480|gb|EEN53229.1| hypothetical protein BRAFLDRAFT_203583 [Branchiostoma floridae]
          Length = 960

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 207/490 (42%), Positives = 290/490 (59%), Gaps = 32/490 (6%)

Query: 105 RYKHTVDLPKTTFGMR-ANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANG 163
           +Y  T+ LPKTTF +R  N    E EI K+    +++     ++  ++FVLHDGPPYANG
Sbjct: 5   KYSDTILLPKTTFPIRPKNPAAEEVEIQKVCGFSELYSWQRQQDRQKDFVLHDGPPYANG 64

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           + H+GHALNKILKD+INRYKLL+ Y+V Y PGWDCHGLPIELK L S   ++ + L P +
Sbjct: 65  DPHVGHALNKILKDVINRYKLLRGYRVDYRPGWDCHGLPIELKAL-SEGRESFRSLQPLQ 123

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADW-NNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           +R K   FA+  +K QM +F+R+GV ADW +  Y T D EYEA Q+EVF +M  +GYIY+
Sbjct: 124 IRNKGRNFAEKAIKNQMDAFRRWGVMADWEHGCYFTFDKEYEAKQLEVFYKMYEKGYIYQ 183

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
             KPV +SPSSRTALAEAELEY E HVS S+YA F + +  P+   ++     D+ +  W
Sbjct: 184 DFKPVFYSPSSRTALAEAELEYKEDHVSHSVYAKFPIATLSPALKDIVGGG-NDISVLTW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TT PWT+PAN A+      +Y + + ++  +                         I+A+
Sbjct: 243 TTLPWTIPANEAMCYTPSHEYCLCQCKTTGQ-----------------------LYILAT 279

Query: 403 DLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           + V       G  L +  T  G  LE     HP  + +   ++   +++   GTGLVHTA
Sbjct: 280 ERVEATAQVLGIHLEVLNTFPGIALEGSTCQHPTKSGKVSPLLPAQHVSMAKGTGLVHTA 339

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           P HG EDY  +L + LP+L+ VD++GK+T++AG    G ++  DGN  VV+ L     L+
Sbjct: 340 PAHGMEDYTVALAFQLPVLTMVDEDGKYTDQAGPDLKGKNIFTDGNETVVEQLRSAGHLV 399

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADV 581
            E+ Y+H YPYDWRTK+P   RA+ QWF +    +  A+D IG V+  P     G  A  
Sbjct: 400 HEQNYKHSYPYDWRTKEPVFIRASLQWFVNTNTIKDRAVDLIGGVRMYP----DGTAASS 455

Query: 582 LRLWVSSVDY 591
           L+ WVS+ +Y
Sbjct: 456 LKAWVSTRNY 465



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 7/188 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 633
           P YGADVLR WV+  D    V IG  +L    D   K+R  LR+LLGNL  +R G +++S
Sbjct: 635 PAYGADVLRWWVAGSDVHSHVYIGNNILNSARDSVLKVRRILRFLLGNLSGFRPGEHTVS 694

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
           Y+ L  +DQY L  L    + + ++YE++ F K+  +    +  +LS+FY ++ KDRLY 
Sbjct: 695 YNQLRPLDQYMLHVLCQYAQKVTDAYENFHFTKVQYLTLGLVTKELSSFYLNITKDRLYC 754

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
              +S  RR CQTV    L  + + +AP+LPHLAE+++ +      ++       VF+S 
Sbjct: 755 DDQSSTGRRGCQTVQFHILEVLTKTLAPVLPHLAEEIYLHHTCLGEVQS------VFKSG 808

Query: 754 WPVLDEKW 761
           W   D  W
Sbjct: 809 WFKTDPAW 816


>gi|420262038|ref|ZP_14764681.1| isoleucine--tRNA ligase [Enterococcus sp. C1]
 gi|394771060|gb|EJF50844.1| isoleucine--tRNA ligase [Enterococcus sp. C1]
          Length = 931

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/470 (44%), Positives = 294/470 (62%), Gaps = 41/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE +  K W+++Q++ R  + N+G+  FVLHDGPPYANG
Sbjct: 2   KMKETLHLGKTAFPMRGNLPNREVDWQKEWEENQLYQRRQELNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHIGHSLNKISKDIIVRSKSMSGFRSPYVPGWDTHGLPIE-QVLTN-KGIKRKEMSLAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A   V  Q A FKR GV  DW++PY+TL P+YEAA+I VFG+M+ +GYIY+G
Sbjct: 120 YRKKCEEYALTQVDTQRADFKRLGVSGDWDHPYITLTPDYEAAEIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +         LL+    D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFPVADG----KDLLDS---DTSFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y                         +L D +K   +VA D
Sbjct: 232 TTPWTLPANLGISVNPTFAYV-----------------------QILADGRK--FVVAKD 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+ T+  E  W +  V+++ LAG  LE     HP  +R   +++ GD++T ++GTGLVHT
Sbjct: 267 LLETVTNEIGWESVEVLQE-LAGDQLEKMTAKHPFYDRTSLLML-GDHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY+ S KYGL +LSPVD  G FTEEA  F G+      N  + + L+E+ +L+
Sbjct: 325 APGHGEDDYIVSKKYGLDVLSPVDSRGVFTEEAPGFEGV-FYDKANPMITELLEEKGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
               + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D I +V W+ P
Sbjct: 384 KLNFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEIEKVDWIIP 433



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 105/159 (66%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVDY  DV +   +L Q+S++YRK+R T+R+LL N  D+    +S+ +++
Sbjct: 612 GADILRLWVSSVDYEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFDPAKDSVPFEN 671

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y + +L   +K IRE  YE Y F  I++ +  F+ VD+S+FY D AKD +Y   
Sbjct: 672 LRSVDKYMMVRLNQTIKTIREDGYEKYNFLHIYRTVINFLTVDMSSFYLDFAKDVVYIEA 731

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              F RR+ QTV     +++ +++ PI+PH AE++W +L
Sbjct: 732 ENDFQRRAMQTVFYQTAVALTKLLTPIIPHTAEEIWSHL 770


>gi|357050531|ref|ZP_09111729.1| isoleucyl-tRNA synthetase [Enterococcus saccharolyticus 30_1]
 gi|355381184|gb|EHG28311.1| isoleucyl-tRNA synthetase [Enterococcus saccharolyticus 30_1]
          Length = 931

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/469 (44%), Positives = 290/469 (61%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 2   KMKETLHLGKTAFPMRGNLPNREIEWQKDWEEQNIYQQRQALNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHALNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T S+
Sbjct: 62  NIHIGHALNKISKDIIVRSKSMSGFRSPYVPGWDTHGLPIE-QVLTN-KGIKRKEMTLSE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A   V  Q   FKR G+  DW++PY+TL P+YEAA+I VFG+M+ +GYIY+G
Sbjct: 120 YRKKCEEYALTQVDTQREDFKRLGISGDWDHPYITLTPDYEAAEIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        G+L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFPVADG----KGILDE---DTSFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y                         ++ D +K   ++A D
Sbjct: 232 TTPWTLPANLGISVNPTFTYV-----------------------QIMADGRK--FVIAKD 266

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++A  G + V I + +AG  LE     HP  +R   V++ GD++T E+GTGLVHTA
Sbjct: 267 LLETVQAAIGWESVEILQEIAGEKLEYMTGQHPFYDRTSLVML-GDHVTLEAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY L +LSPVD  G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIVSKKYKLDVLSPVDSRGMFTEEAPGFEGI-FYDKANPMITDLLAEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D I +V W+ P
Sbjct: 385 LDFFVHSYPHDWRTKKPVIYRATPQWFASIDQFRQNILDEIEKVDWIIP 433



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 102/159 (64%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVDY  DV +   +L Q+S++YRK+R T+R+LL N  D+    + +SY++
Sbjct: 612 GADILRLWVSSVDYEADVRVSMDILNQVSEVYRKIRNTMRFLLANTADFDPKTDMVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y L +L   +K IRE  YE Y F  I++ I  F+  DLS FY D AKD +Y   
Sbjct: 672 LRSVDKYMLVRLNETIKTIREDGYEKYNFLHIYKTIINFLTGDLSAFYLDFAKDVVYIEA 731

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
                RR+ QTV     +++ +++ PI+PH AE++W +L
Sbjct: 732 ENDPQRRAMQTVFYQTAVALTKLLTPIIPHTAEEIWSHL 770


>gi|425058745|ref|ZP_18462121.1| isoleucine--tRNA ligase [Enterococcus faecium 504]
 gi|403037600|gb|EJY48865.1| isoleucine--tRNA ligase [Enterococcus faecium 504]
          Length = 932

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 295/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++++++ +  + N+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLKLGKTKFPMRGNLPNREGEWQKEWEENRIYQKRQELNEGKTSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  Y+  YV GWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGYRAPYVLGWDTHGLPIE-QVLANKGV-KRKEMSMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q A FKR GV  DW +PY+TLDP YEAAQ+ VFG+M+ +GYIY+G
Sbjct: 120 YLEKCREYALSQVDKQRADFKRLGVAGDWEHPYVTLDPSYEAAQVRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +         +L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KDILDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN K  Y +VE                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPKFTYVLVE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++++ G   + + K  AG ++E     HP   R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLETVQSEIGWENVTVLKEFAGQEMEYMTASHPFYERES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY L ++SPVD +G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGSKYKLSVVSPVDSKGLFTEEAPGFEGI-FYDKANPMITDLLKEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V+WV P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEVEKVEWVIP 433



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 107/167 (64%), Gaps = 2/167 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    +GAD+LRLWVSSVDY  DV +   +L Q++++YRK+R T+R+LL N  D+   
Sbjct: 604 PEKVIKQFGADILRLWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPK 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            +++SY+DL  +D+Y   +L  ++K IRE  Y+ Y F  I++ +  F+ VDLS+FY D A
Sbjct: 664 KDTVSYNDLRSVDKYMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 724 KDVVYIEAEDDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|146296917|ref|YP_001180688.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166200200|sp|A4XKR2.1|SYI_CALS8 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|145410493|gb|ABP67497.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 920

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/469 (44%), Positives = 298/469 (63%), Gaps = 36/469 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           +  T++LPKT F MRAN   REP+  + W+++ +F ++  KN + + F+LHDGPPYANG+
Sbjct: 3   WSQTLNLPKTDFPMRANLAQREPQFLRFWEENDIFKKMLKKNRNNKKFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK+LKDI+N+YK LQ Y   Y+PGWD HGLPIE +V++ L  + + ++ P + 
Sbjct: 63  IHLGHALNKVLKDIVNKYKSLQGYYTPYIPGWDTHGLPIEQQVIKKLGVN-RHEVDPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA + +  Q   FKR GV+ +W +PY+TLDP++EA QI VFG+M+ +GYIY+G 
Sbjct: 122 RKKCKEFALSYIDIQRQQFKRLGVFGEWEDPYMTLDPKFEARQIRVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W PS  TALAEAE+EY E   + SIY  F ++      +  LN     + + +WTT
Sbjct: 182 KPVYWCPSCETALAEAEIEYQEDK-TYSIYVKFEVIDDKGLFAN-LNLSGKKVYIVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           T WT+P N A+A+N    Y++V++                  GN +       +IVAS+L
Sbjct: 240 TTWTLPGNLAIALNTDFDYSLVDV------------------GNEI-------LIVASEL 274

Query: 405 VPTLEAKWGTKLVIKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           V  +      K+     +A   G DLE  +  HP  +R   +VI G+++T E+GTG VHT
Sbjct: 275 VERVMK--TNKIDQYHEIARFKGKDLEYVKCKHPFLDRT-SLVILGEHVTLEAGTGCVHT 331

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG+ED+    +Y +P++ PVD++G  T+EAGKF+GL    D N  + K L+    L+
Sbjct: 332 APGHGEEDFEVCERYNIPVIVPVDNKGYLTQEAGKFAGL-FYEDSNKEIAKELEASDHLL 390

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             E   H+YP+ WR K P IFRATEQWFASV+GFR+ A+ A+  VKWVP
Sbjct: 391 GVEKITHQYPHCWRCKNPVIFRATEQWFASVKGFREEALKAVDDVKWVP 439



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 133/207 (64%), Gaps = 7/207 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           +GAD+LRLW  S DYT D+ I   +++Q+++IYRK+R T R+LLGNL+D+    + +  +
Sbjct: 619 FGADILRLWCVSADYTTDMRISKDIIKQLTEIYRKIRNTARFLLGNLYDFNPKTDKVGCE 678

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  ID++AL +L  +++ + ++YE Y + +++ ++  F ++D+SN Y D+ KDRLY   
Sbjct: 679 NLKEIDKWALQRLYKLIEKVTKAYEEYDYNQVYHLVHNFCVIDMSNLYLDINKDRLYASK 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
           + S  RRS QTV+   L+++ ++IAPIL   AE++WQN+ F    ED   AE VF + WP
Sbjct: 739 SESLDRRSAQTVMYEILVALTKLIAPILSFTAEEIWQNIIFKE--ED---AESVFLTSWP 793

Query: 756 VLDEKWRTFPVGEIYFWGKILEVIVVV 782
            ++E        E   W KI+E+  +V
Sbjct: 794 KVNENILKDETLE-EKWNKIIEIKDIV 819


>gi|392940768|ref|ZP_10306412.1| isoleucyl-tRNA synthetase [Thermoanaerobacter siderophilus SR4]
 gi|392292518|gb|EIW00962.1| isoleucyl-tRNA synthetase [Thermoanaerobacter siderophilus SR4]
          Length = 932

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/467 (44%), Positives = 300/467 (64%), Gaps = 32/467 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y  T++LP+T F M+AN   REPEI K W++  ++ +  +KN G E ++LHDGPPYANG+
Sbjct: 3   YNKTLNLPRTDFPMKANLPTREPEILKRWEEMDIYHKTLEKNKGKEKYILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A+NK+LKDII +YK ++ Y   YVPGWD HGLPIE + +++L    + +++P++ 
Sbjct: 63  IHIGTAMNKVLKDIIVKYKTMRGYDAPYVPGWDTHGLPIEQQAIKTLG-IKRHEVSPTEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     FA + ++ Q A FKR GV  DW+NPYLTL+PEYEA QIEVFG+M+ +GYIY+G 
Sbjct: 122 RKVCRDFAFSQIEKQKAQFKRLGVRGDWDNPYLTLNPEYEAKQIEVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W PS  TALAEAE+EY +   S SIY  FR+        G++ E L ++   +WTT
Sbjct: 182 KPVYWCPSCETALAEAEIEYFD-ETSDSIYVKFRVKDDLGKFKGIV-ENLNNVYFVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           T WT+PAN A+A+N +  YA+V+      GD                       I+A D+
Sbjct: 240 TTWTIPANLAIALNPEFDYALVKF-----GDEV--------------------YIMAKDM 274

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + T++ +   +   I     G DLE  +  HP+ +R   ++I G+++T E+GTG VHTAP
Sbjct: 275 LDTVKKEANLSDYEIVAVFKGKDLEGMKATHPLYDRDS-LIILGEHVTLEAGTGCVHTAP 333

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED++   +YGL +L+P+DD+G FT++A  ++GL    + N  + + L +  +L+ E
Sbjct: 334 GHGEEDFLVGQEYGLEVLNPIDDKGYFTDKAPGYAGL-YYEEANKVIKEDLKKANALVAE 392

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H YP+ WR K P IFRATEQWFASVEGFR+ A+ AI +V W P
Sbjct: 393 TRITHSYPHCWRCKSPIIFRATEQWFASVEGFREEALKAIKEVNWYP 439



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 128/204 (62%), Gaps = 9/204 (4%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+    + + Y+
Sbjct: 618 YGADILRLWTVSADFTSDMRISQEILKQMTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYE 677

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  ID++AL++L  +V+ + E+++ Y+++    ++  F +VD+S+ Y D+ KDRLYT  
Sbjct: 678 ELLEIDKWALYRLNRVVEELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYP 737

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG-SAAEFVFESKW 754
            TS  RR+ QT L   L ++VR+IAP+L   +E++W     +Y   D  +  E V  + W
Sbjct: 738 ATSKERRAAQTTLYIILDTLVRLIAPVLTFTSEEIW-----SYMKHDSQNNFESVQLADW 792

Query: 755 PVLDEKWRTFPVGEIYFWGKILEV 778
           P + EK+    +  I  W K+ ++
Sbjct: 793 PQVQEKYNNPYI--IEKWEKLFDI 814


>gi|387602466|ref|YP_005733987.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
 gi|404478531|ref|YP_006709961.1| isoleucyl-tRNA synthetase [Staphylococcus aureus 08BA02176]
 gi|418309750|ref|ZP_12921301.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21331]
 gi|283470404|emb|CAQ49615.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
 gi|365237873|gb|EHM78712.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21331]
 gi|404440020|gb|AFR73213.1| isoleucyl-tRNA synthetase [Staphylococcus aureus 08BA02176]
          Length = 917

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 205/459 (44%), Positives = 279/459 (60%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI G ++TT++GTG VHTAPG
Sbjct: 271 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGYHVTTDAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 330 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   R   +DAI
Sbjct: 389 FITHSYPHDWRTKKPVIFRATPQWFASISKVRHDILDAI 427



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 664

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 665 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 725 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 783

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 784 MPKVVEVDQALLD-KWRTF 801


>gi|323340625|ref|ZP_08080877.1| isoleucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|417974374|ref|ZP_12615195.1| isoleucyl-tRNA synthetase [Lactobacillus ruminis ATCC 25644]
 gi|323091748|gb|EFZ34368.1| isoleucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|346329371|gb|EGX97669.1| isoleucyl-tRNA synthetase [Lactobacillus ruminis ATCC 25644]
          Length = 930

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 213/469 (45%), Positives = 297/469 (63%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  VRE E  K W++++V+ R    N+G+ +FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFPMRGNLPVREAERQKAWEENKVYERRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHA+NKI KDII R K +  ++  YVPGWD HGLPIE ++ ++  +  +K LT + 
Sbjct: 62  NIHMGHAMNKISKDIIVRSKSMMGFRAPYVPGWDTHGLPIEQQLKKAGVD--RKTLTVAD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A   V+ Q   FKR G+  +W+NPYLTL PE+EAAQI VFG+M+ +G IY+G
Sbjct: 120 FREKCREYALKQVEGQKKDFKRLGIAGEWDNPYLTLHPEFEAAQIRVFGKMAEKGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            +PV+WS SS +ALAEAE+EY +     + Y V           G+L+    +  L VWT
Sbjct: 180 LRPVYWSWSSESALAEAEVEYHDVVSPSAFYGV-----QVKDGKGVLD---TNTYLVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  V ++AK  YAVV+     EGD                D+K    ++A++
Sbjct: 232 TTPWTIPASEGVTIDAKFDYAVVKP----EGD----------------DRK---FVLAAE 268

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV     ++G K   + +TL G+DLE     HP  + +  + + GD++T ++GTGLVHTA
Sbjct: 269 LVKENAERFGWKNYEVLETLKGADLEYVTARHPFYDDKELLTMIGDFVTLDAGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G +DY   +KYGLPI +PV+D+G  T++ G  F+G+    D N   +K L E   L+
Sbjct: 329 PGYGDDDYKVGMKYGLPIYAPVNDQGYLTDDCGPDFAGV-FYDDANEVSLKKLKEANVLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +  YEH YP+DWRTKKP IFRAT QWFASV+  R   +DAI +VK++P
Sbjct: 388 KQMDYEHSYPFDWRTKKPIIFRATPQWFASVDKIRSEILDAIDEVKFLP 436



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 97/167 (58%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GA+++RLWV SVD + DV +      Q+S+ YRK R T+R++L N  D+  
Sbjct: 607 VPSEVVDKMGAEIIRLWVLSVDTSADVRVSMDSFSQISESYRKFRNTMRFMLANTTDFDP 666

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N+++YDDL   D+Y         K I + Y +Y F  I++ +  F+  +LS FY DVA
Sbjct: 667 AENTVAYDDLEACDKYMEVLANKFTKEILDDYANYNFMDIYKKLINFLTTELSAFYLDVA 726

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RRS QTVL   L+ + +++ P+LPH  E++W+ L
Sbjct: 727 KDVVYVEAEDSHKRRSMQTVLYDVLVRLTKLMTPVLPHTTEEIWEYL 773


>gi|374709387|ref|ZP_09713821.1| isoleucyl-tRNA synthetase [Sporolactobacillus inulinus CASD]
          Length = 923

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/469 (44%), Positives = 293/469 (62%), Gaps = 43/469 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR    ++EP++ + WD   ++ +    N+G+  F+LHDGPPYANGN
Sbjct: 3   YKKTLLMPKTKFKMRGGLPMKEPKMQEQWDQEHIYEQSLKVNEGKPTFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQ-SLDEDAKKDLTPSK 223
           +H+GHA NK+LKDIINR+K +  Y+  YVPGWD HGLPIE ++ +  +D   +K ++ + 
Sbjct: 63  IHIGHAENKVLKDIINRFKSMSGYQTYYVPGWDTHGLPIEQQLAKKGID---RKKMSVAD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
           LR K  ++A   V+ Q   FKR GV  DW +PYLTL   +EA QI+VFG+M+ +GYIY+ 
Sbjct: 120 LREKCKEYALGQVEQQKKQFKRLGVRGDWEHPYLTLHKAFEAEQIKVFGEMAKKGYIYKD 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KK V+WSPSS +ALAEAE+EY +   S SIY  F +        G+LN    D  + +WT
Sbjct: 180 KKTVYWSPSSESALAEAEIEYKDVK-SYSIYVAFHVTDG----KGVLNH---DEEVIIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+AVN K +Y+VV+++                      D+K    +VAS+
Sbjct: 232 TTPWTMPANLAIAVNPKFEYSVVQVE----------------------DRK---FVVASE 266

Query: 404 LVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           LV  L    +W    V+ +T+ G +LE+    HP  +R   ++I GD++T ++GTG VHT
Sbjct: 267 LVEKLTKTFEWNEPKVL-RTVNGKELEHVVCRHPFYDRPS-LMILGDHVTLDAGTGCVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APG G +D+    KYGL IL PVDD G  T+EA  F G+      N  V++ L E  +L+
Sbjct: 325 APGFGADDFYIGKKYGLDILCPVDDHGCMTDEAPGFEGV-FYEKANEPVIEKLKEVGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               + H YP+DWRTKKP I+RATEQWFAS++ FR   + AI +V W+P
Sbjct: 384 KVGTFTHSYPHDWRTKKPVIWRATEQWFASIKAFRDDILSAIHEVHWIP 432



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 113/164 (68%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 636
           YGAD++RLWV+SVDY  D  +  ++L Q++++YRK+R T+R++LGNL+D+ V   +   D
Sbjct: 611 YGADIIRLWVASVDYQADARVSNEILGQVAEVYRKIRNTVRFMLGNLNDFTVDKIVPTQD 670

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +P ++QY L +L + +     +Y +YQF  +++ +Q +  +DLS FY D+AKD LY    
Sbjct: 671 MPELEQYMLVKLNHFIDTCLNNYSAYQFLNVYKALQNYCSLDLSAFYMDIAKDALYVQPK 730

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTL 740
            S  RRS QTVL   ++++ ++++PI+PH AE++WQN+P A  +
Sbjct: 731 NSLVRRSAQTVLYKTVVAMTKILSPIIPHTAEEIWQNIPGALAI 774


>gi|386728872|ref|YP_006195255.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           71193]
 gi|418978565|ref|ZP_13526365.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           DR10]
 gi|379993389|gb|EIA14835.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           DR10]
 gi|384230165|gb|AFH69412.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           71193]
          Length = 920

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 205/459 (44%), Positives = 279/459 (60%), Gaps = 35/459 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 6   YKETLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 65

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 66  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 124 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 184 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVD---ADAKFIIWTT 235

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        +K +     SD 
Sbjct: 236 TPWTIPSNVAITVHPELKYGQYNVNG----------------------EKYIIAEALSDA 273

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V          + ++K   G +LE     HP  +R+  +VI G ++TT++GTG VHTAPG
Sbjct: 274 VAEALDWDKASIKLEKEYTGKELEYVVAQHPFLDRES-LVINGYHVTTDAGTGCVHTAPG 332

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +
Sbjct: 333 HGEDDYIVGQKYELPVISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLD 391

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
              H YP+DWRTKKP IFRAT QWFAS+   R   +DAI
Sbjct: 392 FITHSYPHDWRTKKPVIFRATPQWFASISKVRHDILDAI 430



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 120/199 (60%), Gaps = 5/199 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP Q     GAD+ RLWVSS DY  DV I  ++L+Q SD+YRK+R TLR++LGN++D+  
Sbjct: 608 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDVYRKIRNTLRFMLGNINDFNP 667

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +SI   +L  +D+Y L +L     +   +YE++ +  I+Q +Q FI V+LSNFY D  
Sbjct: 668 DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYG 727

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD LY     S  RRS QTVL   L+ + +++APIL H AE+VW + P     E    A+
Sbjct: 728 KDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKE-ESVHLAD 786

Query: 748 F--VFESKWPVLDEKWRTF 764
              V E    +LD KWRTF
Sbjct: 787 MPKVVEVDQALLD-KWRTF 804


>gi|257870266|ref|ZP_05649919.1| isoleucyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257804430|gb|EEV33252.1| isoleucyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 931

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/469 (44%), Positives = 290/469 (61%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 2   KMKETLHLGKTAFPMRGNLPNREIEWQKDWEEQNIYQQRQALNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHALNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 62  NIHIGHALNKISKDIIVRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGM-KRKEMTLAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A   V  Q   FKR G+  DW++PY+TL P+YEAA+I VFG+M+ +GYIY+G
Sbjct: 120 YRKKCEEYALTQVDTQREDFKRLGISGDWDHPYITLTPDYEAAEIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        G+L+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFPVADG----KGILDE---DTSFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y                         ++ D +K   ++A D
Sbjct: 232 TTPWTLPANLGISVNPTFTYV-----------------------QIMADGRK--FVIAKD 266

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++A  G + V I + +AG  LE     HP  +R   V++ GD++T E+GTGLVHTA
Sbjct: 267 LLETVQAAIGWESVEILQEIAGEKLEYMTGQHPFYDRTSLVML-GDHVTLEAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY L +LSPVD  G FTEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIVSKKYKLDVLSPVDSRGMFTEEAPGFEGI-FYDKANPMITDLLAEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D I +V W+ P
Sbjct: 385 LDFFVHSYPHDWRTKKPVIYRATPQWFASIDQFRQNILDEIEKVDWIIP 433



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 102/159 (64%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVDY  DV +   +L Q+S++YRK+R T+R+LL N  D+    + +SY++
Sbjct: 612 GADILRLWVSSVDYEADVRVSMDILNQVSEVYRKIRNTMRFLLANTADFDPKTDMVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y L +L   +K IRE  YE Y F  I++ I  F+  DLS FY D AKD +Y   
Sbjct: 672 LRSVDKYMLVRLNETIKTIREDGYEKYNFLHIYKTIINFLTGDLSAFYLDFAKDVVYIEA 731

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
                RR+ QTV     +++ +++ PI+PH AE++W +L
Sbjct: 732 ENDPQRRAMQTVFYQTAVALTKLLTPIIPHTAEEIWSHL 770


>gi|381209823|ref|ZP_09916894.1| isoleucyl-tRNA synthetase [Lentibacillus sp. Grbi]
          Length = 919

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/468 (44%), Positives = 293/468 (62%), Gaps = 40/468 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N   +EPE  + WD+++++ +  ++  G   F+LHDGPPYANG+
Sbjct: 3   YKDTLLMPKTKFPMRGNLPNKEPERQQKWDENRIYEKDLERTKGRPLFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHALNKILKD I RY+ +  Y   YVPGWD HGLP+E   L    +  +K ++ ++ 
Sbjct: 63  LHIGHALNKILKDFITRYRSMSGYHAPYVPGWDTHGLPVET-ALTKKKKVDRKKMSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R + A++A   +  Q   FK++GV  DW+NPY+TL  +YEAAQI+VFG+M+ +GYIYRG 
Sbjct: 122 RQRCAEYAMGQLDNQRNQFKKFGVRGDWDNPYITLTKDYEAAQIKVFGEMAKKGYIYRGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L+    D  + +WTT
Sbjct: 182 KPVYWSPSSESALAEAEIEYHDKR-SPSIYVAFDVTDG----KGVLD---GDEKIIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  +AV+ +L+YAVV +     G+                       ++A +L
Sbjct: 234 TPWTIPANLGIAVHPELEYAVVGVN----GEK---------------------YVIAYEL 268

Query: 405 VPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           + T+  E  W    VI KT  G + +     HP  +R   V++ G+++TT++GTG VHTA
Sbjct: 269 LETMTEELDWENPEVI-KTFKGEEADKVVAKHPFYDRDSLVML-GEHVTTDAGTGCVHTA 326

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D+  S +YG+  LSPVD +G FT EA  F+G +     N ++ + LDE  +L+ 
Sbjct: 327 PGHGEDDFYMSREYGIEPLSPVDYQGYFTNEAPGFAG-EFYDKANKSITEKLDETGALLK 385

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                H YP+DWRTKKPTIFRAT QWFAS++ FRQ  +D I ++ W P
Sbjct: 386 LTFITHSYPHDWRTKKPTIFRATSQWFASIKDFRQDILDEINRINWYP 433



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 120/197 (60%), Gaps = 17/197 (8%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           G D+LRLWVSSVDY  DV I  ++L+Q+S+ YRK+R T+R++LGNL D+    +++   +
Sbjct: 613 GIDILRLWVSSVDYQADVRISQEILKQISEAYRKIRNTVRFMLGNLADFDPAKDAVPEAE 672

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +D+Y L +L+N+VKN+R++Y+ Y++  I+  I  F  +DLS+FY D AKD LY    
Sbjct: 673 MEEVDRYMLHRLQNLVKNVRDNYDIYEYSPIYSQIHNFCAIDLSSFYLDFAKDILYIEAA 732

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 756
            +  RRS QT     + ++V+++ PI+PH  +++W+ +P       G   E V  +  P 
Sbjct: 733 DNHHRRSIQTAYYEIVTTLVKLLTPIIPHTTDEMWEYIP-------GVEEESVQLTDIPE 785

Query: 757 ---------LDEKWRTF 764
                    LDEKW  F
Sbjct: 786 PREITGFGRLDEKWDHF 802


>gi|257873837|ref|ZP_05653490.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257808001|gb|EEV36823.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 931

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/470 (44%), Positives = 293/470 (62%), Gaps = 41/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE +  K W++++++ R  + N+G+  FVLHDGPPYANG
Sbjct: 2   KMKETLHLGKTAFPMRGNLPNREVDWQKEWEENRLYQRRQELNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHIGHSLNKISKDIIVRSKSMSGFRSPYVPGWDTHGLPIE-QVLTN-KGIKRKEMSLAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A   V  Q A FKR GV  DW +PY+TL P+YEAA+I VFG+M+ +GYIY+G
Sbjct: 120 YRKKCEEYALTQVDTQRADFKRLGVSGDWEHPYITLTPDYEAAEIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +         LL+    D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFPVADG----KDLLDS---DTSFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y                         +L D +K   +VA D
Sbjct: 232 TTPWTLPANLGISVNPTFAYV-----------------------QILADSRK--FVVAKD 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+ T+  E  W +  V+++ LAG  LE     HP  +R   +++ GD++T ++GTGLVHT
Sbjct: 267 LLETVTNEIGWESVEVLQE-LAGDQLEKMTAQHPFYDRTSLLML-GDHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY+ S KYGL +LSPVD  G FTEEA  F G+      N  + + L+E+ +L+
Sbjct: 325 APGHGEDDYIVSKKYGLDVLSPVDSRGVFTEEAPGFEGV-FYDKANPMITELLEEKGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
               + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D I +V W+ P
Sbjct: 384 KLNFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEIEKVDWIIP 433



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 106/159 (66%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVDY  DV +   +L Q+S++YRK+R T+R+LL N +D+    +S+ +++
Sbjct: 612 GADILRLWVSSVDYEADVRVSMDILNQVSEVYRKIRNTMRFLLANTNDFDPAKDSVPFEN 671

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y + +L   +K IRE  YE Y F  I++ +  F+ VD+S+FY D AKD +Y   
Sbjct: 672 LRSVDKYMMVRLNQTIKTIREDGYEKYNFLHIYRTVINFLTVDMSSFYLDFAKDVVYIEA 731

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              F RR+ QTV     +++ +++ PI+PH AE++W +L
Sbjct: 732 ENDFQRRAMQTVFYQTAVALTKLLTPIIPHTAEEIWSHL 770


>gi|150020359|ref|YP_001305713.1| isoleucyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|166229776|sp|A6LK77.1|SYI_THEM4 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|149792880|gb|ABR30328.1| isoleucyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 908

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 216/530 (40%), Positives = 305/530 (57%), Gaps = 66/530 (12%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLW---DDHQVFLRVADKNDGENFVLHDGPPYAN 162
           YK T++LP T F MRAN + +EPE+ K W   DD+ + L+   +     FVLHDGPPYAN
Sbjct: 3   YKETLNLPSTEFSMRANLVKKEPEMIKKWHEMDDYNLILK--SREGKPKFVLHDGPPYAN 60

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           GN+H+G A NKILKDI+ RYK ++ Y   YVPGWD HGLPIE +V   + E  K  ++P 
Sbjct: 61  GNIHIGTATNKILKDIVIRYKTMRGYYAPYVPGWDTHGLPIEHRVSVEMGEKIK-GMSPV 119

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           ++R K  +FA   V  Q   FKR GV  DW+NPYLTLDP+YE   + +F  +   G +YR
Sbjct: 120 EIRQKCKEFALHFVDVQREQFKRLGVRGDWDNPYLTLDPKYEKHILNIFKTLVKNGNVYR 179

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+W P+ +TALAEAE+EY + H S SIY  F              E   +  + +W
Sbjct: 180 GNKPVYWCPTCKTALAEAEVEYHD-HSSPSIYVKF--------------ELEKNTYIVIW 224

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+AV+ +  Y  +++                  GN        + IVA 
Sbjct: 225 TTTPWTLPANVAIAVHPEYDYVKIKV------------------GN-------EYWIVAE 259

Query: 403 DLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
            L+    A+   +  + +   G DLE+ +  HP  NR+  +V+  DY+T E GTG VHTA
Sbjct: 260 GLLNKFAAETEIEYSVVEKFKGKDLEHKKAKHPFMNRESLIVL-ADYVTLEDGTGCVHTA 318

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG EDY+T +KY LP+LSPV++EG FT++AGK++GL +  D N  +++ L++   LI 
Sbjct: 319 PGHGAEDYLTGIKYNLPVLSPVNEEGVFTKDAGKYAGLKIW-DANKVIIEDLEKLGVLIK 377

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPP--------- 571
            +  EH YP+ WR K P IFRAT QWF SV+  G R+  ++ I +V+W P          
Sbjct: 378 SQKIEHSYPHCWRCKNPVIFRATPQWFISVDRNGLREKVLEEIKKVEWHPKWGENRITAM 437

Query: 572 -QEAPGYGADVLRLWVSSV-----DYTGDVMIGPQVLRQMSDIYRKLRGT 615
            +E P +     R+W + +        G+V +  +V+    +I  + +GT
Sbjct: 438 VKERPDWTISRQRVWGTPIPAIKCKECGEVFLDEKVIDNFVNIVEE-KGT 486



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 118/192 (61%), Gaps = 7/192 (3%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +    YGAD+LRLWVSS+D+  ++ +G  +++Q  + Y+KLR TLRYLLGNL+D+   
Sbjct: 599 PKEIVDKYGADILRLWVSSIDFFDNIRVGKNIIQQQVETYKKLRNTLRYLLGNLNDFEEN 658

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
             + ++ L  +D++AL +L+ ++  + E +E Y++ K++ ++ R+  V+LS  Y D+ KD
Sbjct: 659 MIVPFEKLLPLDKWALGRLQEVISQVTEHFEKYEYSKVYSLLNRYCTVELSATYLDIIKD 718

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 749
           R+Y     S  RRS QTV+   L S+++++APIL   AE+ +Q  PF          E V
Sbjct: 719 RIYVEAKGSIYRRSAQTVMYYILQSLIKMLAPILVFTAEEAYQLSPF-------KKYETV 771

Query: 750 FESKWPVLDEKW 761
               WP + E++
Sbjct: 772 HLEYWPEVKEEY 783


>gi|257125155|ref|YP_003163269.1| isoleucyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049094|gb|ACV38278.1| isoleucyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 930

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 214/525 (40%), Positives = 313/525 (59%), Gaps = 56/525 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF-VLHDGPPYANGN 164
           Y  T++LPKT+F M+AN   +EP   + W   +++ +    N+G  F VLHDGPPYANG+
Sbjct: 13  YAKTLNLPKTSFKMKANLAQKEPLTLRDWKKAEIYEKSL--NEGAPFFVLHDGPPYANGD 70

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII +YK L+ Y   Y+PGWD HGLPIE K+++ L E A K++TP ++
Sbjct: 71  IHIGHALNKILKDIILKYKRLRGYNAPYIPGWDTHGLPIEWKIMEELGEKA-KNMTPLQI 129

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  K+A   V+ Q   FKR G+  +W+NPY+TL PEYEA Q++VF ++   GY+Y+G 
Sbjct: 130 RQECKKYALKWVEKQKEGFKRLGILGNWDNPYITLRPEYEAEQLKVFKEIYENGYVYKGL 189

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF-LPDLGLAVWT 343
           KPV+WSP++ TALAEAE+EY +   S SIY  F        T  LL++  + +  + +WT
Sbjct: 190 KPVYWSPTTETALAEAEIEYKDVE-SHSIYVKFE------GTQDLLDKLGVEEASILIWT 242

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  V ++ +  Y +                 K+  GN         I+VA +
Sbjct: 243 TTPWTLPANLGVFLHPEFDYGLY----------------KTEKGN---------IVVAKE 277

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           L  T+    G    + K   G++LE   Y HP  +R+  V++ GDY+T ++GTG VH+AP
Sbjct: 278 LAETVFKTLGISYELLKEFKGTELEKTHYRHPFLDREGLVML-GDYVTVDAGTGAVHSAP 336

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG +DY  S KY L +LSPVDD G  T+EAGK+ G+      NV +V+ L E   L+  
Sbjct: 337 GHGADDYNYSRKYELGVLSPVDDRGHMTKEAGKYEGMFYAKASNV-IVQDLTESGHLLHH 395

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPP---------- 571
             + H YP+DWR+KKP IFRATEQWF SV+    R+ A+ A+  V++VP           
Sbjct: 396 SKFVHSYPHDWRSKKPVIFRATEQWFISVDESDIRENAIKALDDVEFVPSWGKNRIGSML 455

Query: 572 QEAPGYGADVLRLWVSSVDY-----TGDVMIGPQVLRQMSDIYRK 611
           +  P +     R+W   +       T +V+  P+++ ++ ++ +K
Sbjct: 456 ETRPDWTISRQRVWGVPIPLFYNRATDEVIYEPEIMDRVIEMVKK 500



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 85/187 (45%), Positives = 121/187 (64%), Gaps = 6/187 (3%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           +P      YGAD+LRLWVSSVDY  DV I   +L+QMSD YR++R T R+L+GNL+D+  
Sbjct: 616 LPKDITEKYGADILRLWVSSVDYREDVRISENILQQMSDAYRRIRNTARFLMGNLNDFDY 675

Query: 629 GNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            N  + Y+D+  ID++A+ +LE +     E Y+ Y+F+ +FQ I  F  +++S+FY D+ 
Sbjct: 676 ANDKVDYNDMFEIDKWAMHKLEELKAKTTEFYDKYEFYSLFQEITYFCSMEMSSFYLDIV 735

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KDRLY  GTTS  RRS QTVL+  L  +VR+IAP+L   A+++W+ +P     E     E
Sbjct: 736 KDRLYCEGTTSIERRSTQTVLTEVLKVLVRIIAPVLSFTADEIWERIP-----ETLKEEE 790

Query: 748 FVFESKW 754
            V  SKW
Sbjct: 791 SVHLSKW 797


>gi|223043792|ref|ZP_03613835.1| isoleucyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|417907106|ref|ZP_12550882.1| isoleucine--tRNA ligase [Staphylococcus capitis VCU116]
 gi|222442889|gb|EEE48991.1| isoleucyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|341596737|gb|EGS39328.1| isoleucine--tRNA ligase [Staphylococcus capitis VCU116]
          Length = 916

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/467 (44%), Positives = 286/467 (61%), Gaps = 41/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           +K T+ +PKT F MR     +EP+I + WD    + +  +KN G ++++LHDGPPYANG+
Sbjct: 3   FKDTLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYKKALEKNKGNQSYILHDGPPYANGS 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKI+KD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSIAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   V  Q   FKR GV  D++NPY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALKQVDIQKKDFKRLGVRGDFDNPYITLTPEYEAAQIRLFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFNV----KDDKGVVDS---DAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y     Q  +EG                        IVA  L
Sbjct: 233 TPWTIPSNVAITVHPELKYG----QYNVEGQK---------------------FIVAQAL 267

Query: 405 VPTLEAKWG---TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
             T+    G     + ++K   G +LE     HP  +R   +VI GD++TT++GTG VHT
Sbjct: 268 SETVADALGWDKDTIQLEKEFTGKELEYVEAQHPFLDR-TSLVINGDHVTTDAGTGCVHT 326

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY+   KY LP++SP++D+G FTEE G+F G+      N AV   L E+ +L+
Sbjct: 327 APGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKDALL 385

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
             +   H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI +  +
Sbjct: 386 KLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDILDAIEETNF 432



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 82/202 (40%), Positives = 121/202 (59%), Gaps = 4/202 (1%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 653
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    + I  ++L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDYNPETDRIPENELLDVDRYLLNRLREFTA 690

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILV 750

Query: 714 SIVRVIAPILPHLAEDVWQNLP 735
            + +++APIL H AE+VW + P
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTP 772


>gi|403069262|ref|ZP_10910594.1| isoleucyl-tRNA synthetase [Oceanobacillus sp. Ndiop]
          Length = 918

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/467 (43%), Positives = 288/467 (61%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N   +EP+  + WD+  ++ +  ++  G   F+LHDGPPYANG+
Sbjct: 3   YKETLLMPKTDFPMRGNLPNKEPKRQEQWDEANMYEKSLERTKGRPLFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHALNKILKD I RYK +  +   YVPGWD HGLPIE  + ++  +  +K+++ ++ 
Sbjct: 63  LHIGHALNKILKDFIVRYKSMTGFHAPYVPGWDTHGLPIETALTKN-KKVKRKEMSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R   A++A   V +Q + F++ G+ ADW+NPY+TL  +YEAAQI+VFG+M+ +GYIY+G 
Sbjct: 122 RKLCAEYALGQVDSQRSQFRQLGIRADWDNPYITLTKDYEAAQIKVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G          + +WTT
Sbjct: 182 KPVYWSPSSESALAEAEIEYQDKR-SASIYVAFEVTDGKDLLDG-------GEKIIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++++ +L+Y V E            AN +               +VA  L
Sbjct: 234 TPWTIPANLGISLHPQLEYVVAE------------ANGEK-------------FVVAQAL 268

Query: 405 VPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + T+  + G + V + KT  G + +     HP  +R   V++ GD++TT++GTG VHTAP
Sbjct: 269 LDTVTEELGWEAVKVTKTFKGKEADRVVAKHPFYDRDSLVML-GDHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D+  S +YG+    PVDD+G FTEEA  F GL      N  V + L+E  +L+  
Sbjct: 328 GHGEDDFYVSKRYGIDAFCPVDDKGVFTEEAPGFEGL-FYDSANKVVTEKLEEVGALLKM 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H YP+DWRTKKPTIFRAT QWFAS++ FRQ  +D I QV W P
Sbjct: 387 SFITHSYPHDWRTKKPTIFRATAQWFASIKDFRQDILDEIKQVNWYP 433



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 106/168 (63%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GAD+LRLWV+SVDY  DV I   +L+Q S+ YRK+R T R+LL NL D+  
Sbjct: 604 VPSKVQKQLGADILRLWVASVDYQADVRISDDILKQTSEAYRKIRNTFRFLLANLADFNP 663

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + ++ + L  +D+Y L +L+ +V +IR +YE Y++ + F  I  F  VDLS+FY D A
Sbjct: 664 ATDKVADEKLEEVDRYMLHRLQQLVSDIRSNYEKYEYSQTFHQIHNFCAVDLSSFYLDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY     +  RRS QT     L ++V+++ PI+PH  ++VW+ +P
Sbjct: 724 KDVLYIEAADNKRRRSIQTGYYEILTTLVKLLTPIIPHTMDEVWEYIP 771


>gi|125624825|ref|YP_001033308.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|389855202|ref|YP_006357446.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
 gi|124493633|emb|CAL98620.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071624|gb|ADJ61024.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 932

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/470 (44%), Positives = 293/470 (62%), Gaps = 41/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MRA    +EP   K W D  ++ +  + N+G+ +F+LHDGPPYANG
Sbjct: 2   KIKDTLNLGKTAFPMRAGLPNKEPNWQKDWSDATLYEKRQELNEGKPSFMLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII RYK +  ++  YVPGWD HGLPIE ++ ++  +  + DL    
Sbjct: 62  NIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLPIEQQLAKAGMKRKEMDLL--D 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              +  K+A   V  Q + FK  GV ADW+ PYLTL PEYEAAQI VFG+M+ +GYIY+G
Sbjct: 120 YLEECRKYAMKQVDMQRSDFKSLGVLADWDRPYLTLLPEYEAAQIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           +KP++WSPSS ++LAEAE+EY +   S SI+  F+       T G L E   D+   +WT
Sbjct: 180 QKPIYWSPSSESSLAEAEIEYQDVR-SASIFVAFKA----KDTKGKLPE---DVEFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P+N  +  +    Y+VV                         D  + F+I AS+
Sbjct: 232 TTPWTIPSNLGIFAHPDYDYSVV------------------------ADNGRKFVI-ASE 266

Query: 404 LVPTLEAK--WGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++  +  K  W    V+ +T+ GS+LE     HP  +R+  +++  DY+T +SGTGLVH 
Sbjct: 267 MLEAVAEKLEWENPEVL-QTIKGSELEYMVAKHPFYDRET-LIMNADYVTLDSGTGLVHV 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY  S KY LP+LSP+D+ G +T+EA    GL    +GN  V K+L+E+ +L+
Sbjct: 325 APGHGEDDYFASRKYKLPVLSPIDNRGYYTDEAPGLEGL-FYDEGNKVVSKWLEEKDALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
             E + H YP+DWRTKKP IFRAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 384 KLEFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRQNILDEVEKVDWVIP 433



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 112/185 (60%), Gaps = 6/185 (3%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP      +GAD+LRLWV+S+D   DV +   +L Q+S++YRK+R TLR+L+ N  D+  
Sbjct: 603 VPKDVTKKFGADILRLWVASIDTESDVRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNP 662

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + I + +L  +D+Y L +   +VK IR++Y++Y F  +++ I  FI  DLS+FY D A
Sbjct: 663 KEDGIDFAELRPVDKYMLVKFNELVKQIRKAYDNYSFMSVYKSIINFITNDLSSFYLDFA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLED 742
           KD +Y     S  RRS QTV+   L  +V+V+ PILPH AE+ W  L      FAY  E 
Sbjct: 723 KDVVYIEAANSPERRSMQTVMYVILKDLVKVLVPILPHTAEETWTYLEHEPENFAYLAEM 782

Query: 743 GSAAE 747
             AAE
Sbjct: 783 PEAAE 787


>gi|314933369|ref|ZP_07840734.1| isoleucine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653519|gb|EFS17276.1| isoleucine--tRNA ligase [Staphylococcus caprae C87]
          Length = 916

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/467 (44%), Positives = 285/467 (61%), Gaps = 41/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G ++++LHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYKKALEKNKGNQSYILHDGPPYANGS 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKI+KD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSIAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   V  Q   FKR GV  D++NPY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALKQVDIQKKDFKRLGVRGDFDNPYITLTPEYEAAQIRLFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+++    D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFNI----KDDKGVVDS---DAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                        QK    IVA  L
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG----------------------QK---YIVAQAL 267

Query: 405 VPTLEAKWG---TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
             T+    G     + ++K   G +LE     HP  +R   +VI G+++TT++GTG VHT
Sbjct: 268 SETVADALGWDKESIQLEKEFTGKELEYVEAQHPFLDR-TSLVINGEHVTTDAGTGCVHT 326

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY+   KY LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+
Sbjct: 327 APGHGEDDYIVGQKYELPVISPLDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKDALL 385

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
             +   H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI +  +
Sbjct: 386 KLDFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDILDAIEETNF 432



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 120/202 (59%), Gaps = 4/202 (1%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 653
           V I  ++L+Q SD+YRK+R TLR++LGN++D+    + I  ++L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNINDYNPESDYIPENELLDVDRYLLNRLREFTA 690

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L 
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEKKDSHKRRSMQTVLYQILT 750

Query: 714 SIVRVIAPILPHLAEDVWQNLP 735
            + ++++PIL H AE+VW + P
Sbjct: 751 DMTKLLSPILVHTAEEVWSHTP 772


>gi|365873669|ref|ZP_09413202.1| isoleucyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
 gi|363983756|gb|EHM09963.1| isoleucyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
          Length = 928

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 215/468 (45%), Positives = 279/468 (59%), Gaps = 34/468 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ LPKT F M+AN   RE E    W +  ++ ++ DK DG   FVLHDGPPYANG+
Sbjct: 6   YKDTLRLPKTDFPMKANLAQREKEFLAFWAERDIYGKMQDKPDGAPTFVLHDGPPYANGH 65

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A NKILKD I +YK ++ Y+  YVPGWD HGLPIELKVL+    D K  L+P  L
Sbjct: 66  IHIGTAFNKILKDFIPKYKSMRGYRAPYVPGWDTHGLPIELKVLKEEGVD-KDQLSPVDL 124

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           RAK AK+A   V  Q   FKR GV  DW+NPYLTL PEYEAAQIE F  M  +G +Y+G+
Sbjct: 125 RAKCAKYALGFVDVQREEFKRLGVLGDWDNPYLTLRPEYEAAQIEAFADMVEKGLVYKGQ 184

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV W    +TALA AE+EY E   S SIY  + M     S   +    + DL + +WTT
Sbjct: 185 KPVFWCTDCQTALAAAEIEY-EDEASPSIYVAYPMRKLSESMGQMP---MDDLFVVIWTT 240

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PA+ AVAV+ + QY V              A+  SR            +I+A + 
Sbjct: 241 TPWTLPASMAVAVHPQYQYGVF------------CASNGSR------------LIMAVER 276

Query: 405 VPTLEAKWGTKL-VIKKTLAGSDLENCRYVHPV-DNRQCPVVIGGDYITTESGTGLVHTA 462
               EA+ G  L    +   G+ LE     HP   +R  P+V+  DY+  +SGTG VHTA
Sbjct: 277 KEAFEAESGISLGEAIRVFPGAGLEGAIAGHPFYADRDIPLVL-ADYVVLDSGTGCVHTA 335

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG ED+ T ++YGL IL+PVD++G F ++     G+ +  DG   V+  L E   L+ 
Sbjct: 336 PGHGVEDFETGVRYGLEILNPVDNKGFFVKDTPLVGGMSI-SDGAKLVMSTLAESGRLLF 394

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               +H YP+ WR K+P IFR+T+QWF SV+ FR+ AM AI  VKWVP
Sbjct: 395 SGKIKHSYPHCWRCKRPVIFRSTDQWFVSVQAFREDAMGAIESVKWVP 442



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 133/229 (58%), Gaps = 10/229 (4%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    ++G V    PQE    YGAD+LRLWV+S DY GDV I  ++L+ + + YR
Sbjct: 598 VDGHGRKMSKSLGNV--TSPQEVIDKYGADILRLWVASTDYRGDVRISDRILKNLVESYR 655

Query: 611 KLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R++LGNL D+    + +S  DL   D++AL +L+++V+ + + YE Y+F   + 
Sbjct: 656 RIRNTARFILGNLSDFDPSKHMVSRHDLMPFDKWALSRLQDLVEKVTKGYEEYEFHVPYF 715

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F   D+S+ Y DV KDRLY       +RRS Q+ +   L+S+ +++APIL    E+
Sbjct: 716 AVHQFCDNDMSSLYLDVCKDRLYADHCDGLSRRSAQSAMWEILISLTKILAPILSFTCEE 775

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           +WQ   FA  + D S  E VF S WP +D         E+  W ++ EV
Sbjct: 776 IWQ---FARQM-DPSLEESVFLSAWPSVDRT--GLDDVEMKNWSRLFEV 818


>gi|329769692|ref|ZP_08261095.1| isoleucyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328838300|gb|EGF87911.1| isoleucyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 910

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/465 (44%), Positives = 291/465 (62%), Gaps = 40/465 (8%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGNL 165
           K T+ +PKT F MR N   +EPE  K W++  ++ +V +KN G+ ++VLHDGPPYANGN+
Sbjct: 5   KDTLLMPKTKFPMRGNLPNKEPEFLKRWEEMDLYRKVLEKNAGKPSYVLHDGPPYANGNI 64

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKD I +YK +  +   YVPGWD HGLPIE +VL +   D +K +  +K R
Sbjct: 65  HIGHALNKILKDFIVKYKNMNGFVSNYVPGWDTHGLPIE-QVLVNNGVD-RKSMPATKFR 122

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            K   +A   V  Q A FK+ GV  DW NPYLTLDP++EA QI VFG+M  +GYIY+G K
Sbjct: 123 NKCKDYALKQVDKQRADFKKLGVIGDWENPYLTLDPKFEAEQIRVFGKMVDKGYIYKGLK 182

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           P++WSPSS +ALAEAE+EY + H S SIY  F +VS      G++ +        +WTTT
Sbjct: 183 PIYWSPSSESALAEAEIEYRD-HTSPSIYVGFELVSE----DGVVEK---GTKFVIWTTT 234

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN  +AV+   +Y  V++     G++                      ++A + V
Sbjct: 235 PWTLPANLGIAVHPDFEYQEVKVN----GEN---------------------YLLAKERV 269

Query: 406 PTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
             L  ++G     + KT+ G +LE     HP  +R   V++  DY+T +SGTGLVHTAPG
Sbjct: 270 NFLAEQFGWENFELGKTVLGKELEYLLCQHPFLDRTSTVILA-DYVTLDSGTGLVHTAPG 328

Query: 465 HGQEDYVTSL-KYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           HG +D++    KY L +LSPVD++G  TEEAG+F+G  V  D N  ++ +L E  +L+ +
Sbjct: 329 HGVDDFIVGQGKYKLGVLSPVDNQGNLTEEAGQFAGQFVF-DANKNIIAHLAETGALLKQ 387

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
           E   H YP+DWR+KKP IFR+T QWF SV+ FR   +DA+ + K+
Sbjct: 388 ENITHSYPHDWRSKKPIIFRSTPQWFCSVDAFRSELLDAVDRTKF 432



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 112/193 (58%), Gaps = 11/193 (5%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS---ISY 634
           GA+++RLW +SVDYT DV I   +L+Q+S+ YRK+R T R+LLGNL +    N    +SY
Sbjct: 614 GAEIIRLWSASVDYTQDVRISNDILKQVSETYRKIRNTFRFLLGNLFNGSFDNRTDLLSY 673

Query: 635 DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTG 694
           D+L  +D+Y + + E +V  + + YE+YQF  I   +  F  V+LS+FY D  KD LY  
Sbjct: 674 DELEELDKYMVLKFEKVVAKVLDYYENYQFNSITTELINFFNVELSSFYLDYGKDILYIE 733

Query: 695 GTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYTLEDGSAAEFV- 749
              S  R S  TVL   L   VR++APIL   AE+V+ N+P+    +  L D  A   + 
Sbjct: 734 AEKSHKRLSMLTVLYTVLSKSVRLLAPILSFTAEEVYDNMPYEDAESVHLTDFPAKNLID 793

Query: 750 ---FESKWPVLDE 759
               E+KW  L E
Sbjct: 794 DAALEAKWDKLLE 806


>gi|257867508|ref|ZP_05647161.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257801564|gb|EEV30494.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC30]
          Length = 929

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/468 (44%), Positives = 292/468 (62%), Gaps = 41/468 (8%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGNL 165
           K T+ L KT F MR N   RE +  K W++++++ R  + N+G+  FVLHDGPPYANGN+
Sbjct: 2   KETLHLGKTAFPMRGNLPNREVDWQKEWEENRLYQRRQELNEGKPTFVLHDGPPYANGNI 61

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K+++ ++ R
Sbjct: 62  HIGHSLNKISKDIIVRSKSMSGFRSPYVPGWDTHGLPIE-QVLTN-KGIKRKEMSLAEYR 119

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            K  ++A   V  Q A FKR GV  DW +PY+TL P+YEAA+I VFG+M+ +GYIY+G K
Sbjct: 120 KKCEEYALTQVDTQRADFKRLGVSGDWEHPYITLTPDYEAAEIRVFGKMAEKGYIYKGLK 179

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           P++WSPSS ++LAEAE+EY +   S SIY  F +         LL+    D    +WTTT
Sbjct: 180 PIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFPVADG----KDLLDS---DTSFVIWTTT 231

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN  ++VN    Y                         +L D +K   +VA DL+
Sbjct: 232 PWTLPANLGISVNPTFAYV-----------------------QILADSRK--FVVAKDLL 266

Query: 406 PTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
            T+  E  W +  V+++ LAG  LE     HP  +R   +++ GD++T ++GTGLVHTAP
Sbjct: 267 ETVTNEIGWESVEVLQE-LAGDQLEKMTAQHPFYDRTSLLML-GDHVTLDAGTGLVHTAP 324

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++DY+ S KYGL +LSPVD  G FTEEA  F G+      N  + + L+E+ +L+  
Sbjct: 325 GHGEDDYIVSKKYGLDVLSPVDSRGVFTEEAPGFEGV-FYDKANPMITELLEEKGALLKL 383

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
             + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D I +V W+ P
Sbjct: 384 NFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEIEKVDWIIP 431



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 106/159 (66%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVDY  DV +   +L Q+S++YRK+R T+R+LL N +D+    +S+ +++
Sbjct: 610 GADILRLWVSSVDYEADVRVSMDILNQVSEVYRKIRNTMRFLLANTNDFDPAKDSVPFEN 669

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y + +L   +K IRE  YE Y F  I++ +  F+ VD+S+FY D AKD +Y   
Sbjct: 670 LRSVDKYMMVRLNQTIKTIREDGYEKYNFLHIYRTVINFLTVDMSSFYLDFAKDVVYIEA 729

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              F RR+ QTV     +++ +++ PI+PH AE++W +L
Sbjct: 730 ENDFQRRAMQTVFYQTAVALTKLLTPIIPHTAEEIWSHL 768


>gi|15673845|ref|NP_268020.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|81537525|sp|Q9CEH8.1|SYI_LACLA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|12724895|gb|AAK05961.1|AE006416_6 isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
          Length = 932

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/470 (44%), Positives = 294/470 (62%), Gaps = 41/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MRA    +EP   K W D  ++ +  + N+G+ +F+LHDGPPYANG
Sbjct: 2   KIKDTLNLGKTAFPMRAGLPNKEPNWQKDWADATLYEKRQELNEGKPSFMLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII RYK +  ++  YVPGWD HGLPIE ++ ++  +  + DL    
Sbjct: 62  NIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLPIEQQLAKAGMKRKEMDLL--D 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              +  K+A   V  Q + FK  GV ADW+ PYLTL PEYEAAQI VFG+M+ +GYIY+G
Sbjct: 120 YLEECRKYAMKQVDMQRSDFKSLGVLADWDRPYLTLLPEYEAAQIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           +KP++WSPSS ++LAEAE+EY +   S SI+  F+       T G L E   D+   +WT
Sbjct: 180 QKPIYWSPSSESSLAEAEIEYQDVR-SASIFVAFKA----KDTKGKLPE---DVEFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P+N  +  +    Y+VV +                          + F+I AS+
Sbjct: 232 TTPWTIPSNLGIFAHPDYDYSVVAVNG------------------------RKFVI-ASE 266

Query: 404 LVPTLEAK--WGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++  +  K  W    V+ +T+ GS+LE     HP  +R+  +++  DY+T +SGTGLVH 
Sbjct: 267 MLEAVAEKLEWENPEVL-QTIKGSELEYMVAKHPFYDRET-LIMNADYVTLDSGTGLVHV 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY  S KY LP+LSP+D+ G +T+EA    GL +  +GN  V K+L+E+ +L+
Sbjct: 325 APGHGEDDYFASRKYKLPVLSPIDNRGYYTDEAPGLEGL-LYDEGNKVVSKWLEEKDALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
             E + H YP+DWRTKKP IFRAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 384 KLEFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRQNILDEVERVDWVIP 433



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/186 (41%), Positives = 112/186 (60%), Gaps = 6/186 (3%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP      +GAD+LRLWV+S+D   DV +   +L Q+S++YRK+R TLR+L+ N  D+  
Sbjct: 603 VPKDVTKKFGADILRLWVASIDTESDVRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNP 662

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++I + +L  +D+Y L +   +VK IR +Y++Y F  +++ I  FI  DLS+FY D A
Sbjct: 663 KEDAIDFAELRPVDKYMLVKFNELVKQIRTAYDNYSFMTVYKSIINFITNDLSSFYLDFA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLED 742
           KD +Y     S  RRS QTV+   L  +V+++ PILPH AE+ W  L      FAY  E 
Sbjct: 723 KDVVYIEAANSPERRSMQTVMYVILKDLVKILVPILPHTAEETWTYLEHEPENFAYLAEM 782

Query: 743 GSAAEF 748
             AAE 
Sbjct: 783 PEAAEI 788


>gi|312111749|ref|YP_003990065.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|336236132|ref|YP_004588748.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|423720665|ref|ZP_17694847.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidans
           TNO-09.020]
 gi|311216850|gb|ADP75454.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|335362987|gb|AEH48667.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|383366018|gb|EID43309.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidans
           TNO-09.020]
          Length = 923

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/466 (44%), Positives = 280/466 (60%), Gaps = 37/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +P+T F MR N   REP+I K W++  ++ +V ++  G   FVLHDGPPYANG+
Sbjct: 3   YKETLLMPRTEFPMRGNLPKREPQIQKKWEEMDIYRKVQERTKGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKDII RYK +  Y   YVPGWD HGLPIE  + +   +  +K ++ ++ 
Sbjct: 63  IHMGHALNKILKDIIVRYKSMSGYCAPYVPGWDTHGLPIETALTKKGVD--RKSMSVAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   +  Q   FKR GV  DW NPY+TL  EYEA QI+VFG+M+ +G IY+G 
Sbjct: 121 RKLCEQYAYEQINNQREQFKRLGVRGDWENPYITLTREYEAQQIKVFGEMAKKGLIYKGL 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L+    D  + +WTT
Sbjct: 181 KPVYWSPSSESALAEAEIEYKDKR-SPSIYVAFPVKDG----KGVLD---GDEKIVIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+AV+  L Y VVE                           K  +  A   
Sbjct: 233 TPWTIPANLAIAVHPDLDYQVVETNG-----------------------AKYVVAAALLA 269

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
               E  W    V+K T+ G DLE     HP  +R   +V+ G+++TT++GTG VHTAPG
Sbjct: 270 SVAKEIGWDDVTVVK-TIKGKDLEYVVAKHPFYDRDS-LVVCGEHVTTDAGTGCVHTAPG 327

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++D++   KYGL +L PVD+ G  T EA  F GL    + N A+ + L+E  +L+   
Sbjct: 328 HGEDDFIVGQKYGLDVLCPVDERGYMTSEAPGFEGL-FYDEANKAITQKLEEVGALLKLS 386

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              H YP+DWRTKKPTIFRAT QWFAS++  R   + AI + KW+P
Sbjct: 387 FITHSYPHDWRTKKPTIFRATTQWFASIDKIRGELLQAIKETKWIP 432



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 113/168 (67%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GAD+LRLWV+SVDY  DV I   +L+Q++++YRK+R T R++LGNL D+  
Sbjct: 603 VPAKVMEQLGADILRLWVASVDYQADVRISDSILKQVAEVYRKIRNTFRFMLGNLFDFNP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +++  ++L  +D+Y L +L  +++ ++++YE+Y F  I+  +  F  VDLS FY D A
Sbjct: 663 ETDAVPVNELREVDRYMLVKLNRLIEKVKQAYETYDFASIYHDVNNFCTVDLSAFYLDFA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY        RRS QTVL   ++++ +++APILPH AE+VW+++P
Sbjct: 723 KDILYIEAPNDRARRSIQTVLYEAVVALTKLVAPILPHTAEEVWEHIP 770


>gi|334133962|ref|ZP_08507497.1| isoleucine--tRNA ligase [Paenibacillus sp. HGF7]
 gi|333608470|gb|EGL19767.1| isoleucine--tRNA ligase [Paenibacillus sp. HGF7]
          Length = 920

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/466 (42%), Positives = 281/466 (60%), Gaps = 36/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y  T+ L KT F MR N    EP++   W+++ ++ +V +   G E F+LHDGPPYANG+
Sbjct: 3   YGKTLQLLKTDFPMRGNLPQAEPKMQAHWEENDIYAKVQESRKGREKFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII R+K +Q Y   YVPGWD HGLPIE  +  S   D KK ++ ++ 
Sbjct: 63  IHIGHALNKILKDIIVRFKTMQGYDAPYVPGWDTHGLPIEQAIANSGKVDRKK-MSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   V+ Q   FKR G+  DW++PY+TL PEYEA QI +FG+M  +GYIY+G 
Sbjct: 122 RKYCEEYALQWVERQKEQFKRLGIRGDWDHPYITLQPEYEAEQIRLFGEMVKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY E   S SIY  F +        G L +   D    +WTT
Sbjct: 182 KPVYWSPSSESALAEAEIEYKE-KTSPSIYVAFDVAEG----QGKLPQ---DAAFVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+    YAVVE+                          K +++    L
Sbjct: 234 TPWTLPANLGISVHPDFTYAVVEVSG------------------------KKYVLAEGLL 269

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
               +A   T   +  T+ GS+LEN    HP  +R+  V++ G+++T E+GTG VHTAPG
Sbjct: 270 ESAAKAIGWTDYSMVSTVKGSELENVTCKHPFYDRESLVML-GEHVTLEAGTGCVHTAPG 328

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++D++   KY + +L PVDD+G FT EA    G+     GN  ++++L+    L+   
Sbjct: 329 HGEDDFIVGQKYKIGVLCPVDDQGHFTAEAPGLEGV-FYEKGNKTILEWLENSGHLLHAS 387

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              H+Y +DWRTKKP I+RATEQWFAS++ FR   ++ I ++KW P
Sbjct: 388 SINHQYAHDWRTKKPVIYRATEQWFASIDKFRDEMLEEIKKIKWTP 433



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 112/167 (67%), Gaps = 1/167 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P Q     GAD+LRLWVSSVDY  DV I   +L Q++++YRK+R TLR+LLGNL  +  V
Sbjct: 606 PSQVCNKLGADILRLWVSSVDYQSDVRISDNILSQITEVYRKIRNTLRFLLGNLSQFDPV 665

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + + +  +  +DQYA+ +L  + + + ++Y++Y+F  ++Q +  F  V++S+FY D+ K
Sbjct: 666 KDRVDFAQMSELDQYAVIRLNRMTEKVTKAYDAYEFHVVYQAVHHFCAVEMSSFYLDIIK 725

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           DRLY        R++ QTVL   LL+I ++IAPILPH A++VW+ +P
Sbjct: 726 DRLYADAADDSARKASQTVLYDALLAITKLIAPILPHTADEVWKYIP 772


>gi|167037288|ref|YP_001664866.1| isoleucyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167040517|ref|YP_001663502.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300914564|ref|ZP_07131880.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307724200|ref|YP_003903951.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|320115704|ref|YP_004185863.1| isoleucyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|254782449|sp|B0K8R7.1|SYI_THEP3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|254782450|sp|B0K2W1.1|SYI_THEPX RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|166854757|gb|ABY93166.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|166856122|gb|ABY94530.1| isoleucyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|300889499|gb|EFK84645.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307581261|gb|ADN54660.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|319928795|gb|ADV79480.1| isoleucyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 932

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/467 (44%), Positives = 299/467 (64%), Gaps = 32/467 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y  T++LP+T F M+AN   REPEI K W++  ++ +  +KN G E ++LHDGPPYANG+
Sbjct: 3   YNKTLNLPRTDFPMKANLPTREPEILKRWEEMDIYHKTLEKNKGKEKYILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A+NK+LKDII +YK ++ Y   YVPGWD HGLPIE + +++L    + +++P++ 
Sbjct: 63  IHIGTAMNKVLKDIIVKYKTMRGYDAPYVPGWDTHGLPIEQQAIKTLG-IKRHEVSPTEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     FA + ++ Q A FKR GV  DW+NPYLTL+PEYEA QIEVFG+M+ +GYIY+G 
Sbjct: 122 RKVCRDFAFSQIEKQKAQFKRLGVRGDWDNPYLTLNPEYEAKQIEVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W PS  TALAEAE+EY +   S SIY  FR+        G++ E L ++   +WTT
Sbjct: 182 KPVYWCPSCETALAEAEIEYFD-ETSDSIYVKFRVKDDLGKFKGIV-ENLNNVYFVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           T WT+PAN A+A+N +  YA+ +      GD                       I+A D+
Sbjct: 240 TTWTIPANLAIALNPEFDYALAKF-----GDEV--------------------YIMAKDM 274

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + T++ +   +   I     G DLE  +  HP+ +R   ++I G+++T E+GTG VHTAP
Sbjct: 275 LDTVKKEANLSDYEIVAVFKGKDLEGMKATHPLYDRDS-LIILGEHVTLEAGTGCVHTAP 333

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED++   +YGL +L+P+DD+G FT++A  ++GL    + N  + + L +  +L+ E
Sbjct: 334 GHGEEDFLVGQEYGLEVLNPIDDKGYFTDKAPGYAGL-YYEEANKVIKEDLKKANALVAE 392

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H YP+ WR K P IFRATEQWFASVEGFR+ A+ AI +V W P
Sbjct: 393 TRITHSYPHCWRCKSPIIFRATEQWFASVEGFREEALKAIKEVNWYP 439



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 128/204 (62%), Gaps = 9/204 (4%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+    + + Y+
Sbjct: 618 YGADILRLWTVSADFTSDMRISQEILKQMTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYE 677

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  ID++ALF+L  +V+ + E+++ Y+++    ++  F +VD+S+ Y D+ KDRLYT  
Sbjct: 678 ELLEIDKWALFRLNRVVEELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYP 737

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG-SAAEFVFESKW 754
            TS  RR+ QT L   L ++VR+IAP+L   +E++W     +Y   D  +  E V  + W
Sbjct: 738 ATSKERRAAQTTLYIILDTLVRLIAPVLTFTSEEIW-----SYMKHDSQNNFESVQLADW 792

Query: 755 PVLDEKWRTFPVGEIYFWGKILEV 778
           P + EK+    +  I  W K+ ++
Sbjct: 793 PQVQEKYNNPYI--IEKWEKLFDI 814


>gi|326389978|ref|ZP_08211541.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325994038|gb|EGD52467.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 932

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/467 (44%), Positives = 299/467 (64%), Gaps = 32/467 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y  T++LP+T F M+AN   REPEI K W++  ++ +  +KN G E ++LHDGPPYANG+
Sbjct: 3   YNKTLNLPRTDFPMKANLPTREPEILKRWEEMDIYHKTLEKNKGKEKYILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A+NK+LKDII +YK ++ Y   YVPGWD HGLPIE + +++L    + +++P++ 
Sbjct: 63  IHIGTAMNKVLKDIIVKYKTMRGYDAPYVPGWDTHGLPIEQQAIKTLG-IKRHEVSPTEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     FA + ++ Q A FKR GV  DW+NPYLTL+PEYEA QIEVFG+M+ +GYIY+G 
Sbjct: 122 RKVCRDFAFSQIEKQKAQFKRLGVRGDWDNPYLTLNPEYEAKQIEVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W PS  TALAEAE+EY +   S SIY  FR+        G++ E L ++   +WTT
Sbjct: 182 KPVYWCPSCETALAEAEIEYFD-ETSDSIYVKFRVKDDLGKFKGIV-ENLNNVYFVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           T WT+PAN A+A+N +  YA+ +      GD                       I+A D+
Sbjct: 240 TTWTIPANLAIALNPEFDYALAKF-----GDEV--------------------YIMAKDM 274

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + T++ +   +   I     G DLE  +  HP+ +R   ++I G+++T E+GTG VHTAP
Sbjct: 275 LDTVKKEANLSDYEIVAVFKGKDLEGMKATHPLYDRDS-LIILGEHVTLEAGTGCVHTAP 333

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED++   +YGL +L+P+DD+G FT++A  ++GL    + N  + + L +  +L+ E
Sbjct: 334 GHGEEDFLVGQEYGLDVLNPIDDKGYFTDKAPGYAGL-YYEEANKVIKEDLKKANALVAE 392

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H YP+ WR K P IFRATEQWFASVEGFR+ A+ AI +V W P
Sbjct: 393 TRITHSYPHCWRCKSPIIFRATEQWFASVEGFREEALKAIKEVNWYP 439



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 128/204 (62%), Gaps = 9/204 (4%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+    + + Y+
Sbjct: 618 YGADILRLWTVSADFTSDMRISQEILKQMTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYE 677

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  ID++AL++L  +V+ + E+++ Y+++    ++  F +VD+S+ Y D+ KDRLYT  
Sbjct: 678 ELLEIDKWALYRLNRVVEELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYP 737

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG-SAAEFVFESKW 754
            TS  RR+ QT L   L ++VR+IAP+L   +E++W     +Y   D  +  E V  + W
Sbjct: 738 ATSKERRAAQTTLYIILDTLVRLIAPVLTFTSEEIW-----SYMKHDSQNNFESVQLADW 792

Query: 755 PVLDEKWRTFPVGEIYFWGKILEV 778
           P + EK+    +  I  W K+ ++
Sbjct: 793 PQVQEKYNNPYI--IEKWEKLFDI 814


>gi|328957135|ref|YP_004374521.1| isoleucine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673459|gb|AEB29505.1| isoleucine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 929

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 211/470 (44%), Positives = 293/470 (62%), Gaps = 45/470 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N  VRE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPVRELEWQKNWEELDIYGQRQKINEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           N+H+GHALNKI KDII RYK +  ++  YVPGWD HGLPIE    Q+L      +K+++ 
Sbjct: 62  NIHIGHALNKISKDIIVRYKSMSGFRSPYVPGWDTHGLPIE----QALTNKGVKRKEMSL 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R    ++A   V  Q   FKR GV  +W++PY+TL  EYE AQI VFG+M+ +GYIY
Sbjct: 118 AEFRKLCEEYAWEQVNKQKEDFKRLGVAGEWDHPYVTLTKEYEEAQIRVFGKMAEKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G KP++WSPSS +ALAEAE+EY +   S SIY  F++V       GL++E   D    +
Sbjct: 178 KGLKPIYWSPSSESALAEAEIEYKDVK-SASIYVGFKVVDG----KGLIDE---DTSFVI 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P+N A+ V+ +  Y+V                       V+ D KK   ++A
Sbjct: 230 WTTTPWTIPSNLAITVHPEYDYSV-----------------------VVADGKKY--VLA 264

Query: 402 SDLVP--TLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
            DL+   T E  W     IK+ L G DLE     HP+ +R   ++I GD++T E+GTGLV
Sbjct: 265 KDLIDAVTEEIGWNQVETIKE-LKGKDLEFMTAQHPMYDR-TSLLILGDHVTLEAGTGLV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG +D++   KY L +LSPVDD+G FT+EA    G+    DGN  + ++L+++ +
Sbjct: 323 HTAPGHGDDDFIVGQKYKLSVLSPVDDKGCFTDEAPGLEGI-FYNDGNKVITEWLEKEGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
           L+    + H YP+DWRTKKP IFRAT QWFAS++ FR   ++A+  V+WV
Sbjct: 382 LLKLNFFTHSYPHDWRTKKPVIFRATPQWFASIDQFRGDILEAVEGVEWV 431



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 109/182 (59%), Gaps = 9/182 (4%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWVSSVD   DV +  ++L+Q+S++YRK+R T+R+LL N  D+    N + + D
Sbjct: 612 GADIVRLWVSSVDTQADVRVSDEILKQVSEVYRKIRNTMRFLLANTTDYDPSANKVDFHD 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y + +L  +V+     Y+ Y+F  I+Q+I  F  VDLS FY D AKD +Y    
Sbjct: 672 LRSVDKYLMIRLNQLVEKAEGHYDRYEFSSIYQLINNFCTVDLSQFYLDFAKDVVYIEAE 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 756
            ++ RR+ QTV    L+ I +++ PILPH AE++W  L            EFV  +  P 
Sbjct: 732 DAYERRAMQTVFYEVLVKITKLLTPILPHTAEEIWSFL--------SETDEFVQLTDMPA 783

Query: 757 LD 758
           +D
Sbjct: 784 ID 785


>gi|297583961|ref|YP_003699741.1| isoleucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142418|gb|ADH99175.1| isoleucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 920

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 214/467 (45%), Positives = 293/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REP + + W + +++ +V  + +G   FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTEFPMRGNLPKREPAMQEQWAEEKIYEQVQKRTEGRPMFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  +   YVPGWD HGLPIE  + +    D KK L+ ++ 
Sbjct: 63  IHMGHALNKILKDFIVRYKSMSGFHAPYVPGWDTHGLPIETALTKKGKVDRKK-LSVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   +  Q   FK+ GV  DW+NPY+TL  +YEA QI VFG+M+ +GYIY+GK
Sbjct: 122 RKKCEEYALGQIDRQREQFKQLGVRGDWDNPYVTLTHDYEAQQIRVFGEMAKKGYIYKGK 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F++V      SG       D  + +WTT
Sbjct: 182 KPVYWSPSSESALAEAEIEYHDKR-SSSIYVAFKVVDGKGVLSG-------DEEVVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+AV+  L+Y  VE               K R            ++VA  +
Sbjct: 234 TPWTIPANLAIAVHPDLEYVSVET--------------KGRK-----------LVVAKGM 268

Query: 405 VPTLEAKWGTKL-VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           +  LEA+   +   + +T  GSDLE     HP+ +R+  +V+ GD++T ++GTG VHTAP
Sbjct: 269 LEHLEAEGVVESGDVHQTFKGSDLEGILTKHPLYDRESLMVL-GDHVTLDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++DY+   KYGL IL PVDD+G FT+EA  FSGL      N  + + LDE+ +L+  
Sbjct: 328 GHGEDDYIVGQKYGLDILCPVDDKGHFTDEAPMFSGL-FYDAANKPITEALDERGALLKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + H YP+DWRTKKP I+RAT QWFAS++ FR+  +  I  V+W+P
Sbjct: 387 NFFTHSYPHDWRTKKPVIYRATSQWFASIKDFREDLLKEIEDVQWMP 433



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 112/168 (66%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           +P       GAD+LRLWV+SVDY  DV +   +L+Q++++YRK+R T R+LLGNL  +  
Sbjct: 604 IPANVMKQLGADILRLWVASVDYQADVRVSDAILKQVAEVYRKIRNTFRFLLGNLDGFVP 663

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +++S+DDL  +DQY + +L +++ + R++Y+ YQF  I+  +Q F  V+LS+FY D++
Sbjct: 664 SEHAVSFDDLGELDQYMMLKLNDLITSTRKAYDEYQFAGIYNKVQNFCTVELSSFYMDIS 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY        RR  QTV+   L S+V++++PIL H +++VW  +P
Sbjct: 724 KDTLYVEHADHEDRRRIQTVMYHTLTSLVKLMSPILSHTSDEVWAYIP 771


>gi|403667695|ref|ZP_10932995.1| isoleucyl-tRNA synthetase 1 [Kurthia sp. JC8E]
          Length = 926

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 210/469 (44%), Positives = 291/469 (62%), Gaps = 39/469 (8%)

Query: 104 GRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYAN 162
             YK T+ +PKT F MR N    EP++ + W +  +  +V ++  D   FVLHDGPPYAN
Sbjct: 2   AEYKKTLLMPKTDFPMRGNLPNMEPKMQEKWAEMDINAKVLERTKDRTPFVLHDGPPYAN 61

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G++HMGHALNK+LKD+INR++ +  Y V YVPGWD HGLPIE + L +   D KK ++ +
Sbjct: 62  GDIHMGHALNKVLKDMINRHRSMTGYYVPYVPGWDTHGLPIE-QALTNKGHDRKK-MSIA 119

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
             R    ++A   V  Q   FKR G+ ADW NPY+TL+PE+EA QI VFG M+ +GYI++
Sbjct: 120 DFRELCKEYALDQVNNQREQFKRIGIRADWENPYITLNPEFEARQIGVFGDMAKKGYIFK 179

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+LN    D  L +W
Sbjct: 180 GLKPVYWSPSSESALAEAEIEYKDIK-SPSIFVAFKVEDG----KGVLNN---DEELVIW 231

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  ++VN +  Y V ++           A++K               +VA 
Sbjct: 232 TTTPWTMPANLGISVNPEFTYVVAKV-----------ADRK--------------FVVAK 266

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +L+ T+  K G + V I + + G+ LEN    HP+ +R   V++ GD++T E+GTG VHT
Sbjct: 267 ELLNTVAEKNGWEDVQIDREINGASLENITAKHPLFDRTSLVML-GDHVTLEAGTGCVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY    +YGL ILS VD+ G  TE AG+F+G+      N  + + L+E  +L+
Sbjct: 326 APGHGEDDYQVGKRYGLEILSVVDNRGILTEAAGEFAGM-FYDKANKPICEKLEEVGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               +EH YP+DWRTKKP IFRAT QWFAS+E FR A + AI    + P
Sbjct: 385 SLTFFEHSYPHDWRTKKPVIFRATPQWFASIEKFRPALLQAIRDTNFTP 433



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 120/174 (68%), Gaps = 3/174 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV- 628
           P +    YGAD+LR+WV+SVDYT DV I   +L+Q+S++YRK+R TL+++ GNL D+   
Sbjct: 604 PAKIMQQYGADILRMWVASVDYTADVRISMDMLKQVSEMYRKVRNTLKFVHGNLADFNYE 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + + Y+DL  +DQY   QL+ +V+ +R +Y++Y+F  +++ I  FI  +LS+FY D+AK
Sbjct: 664 TDYVKYEDLREVDQYMYMQLQKLVQTVRTAYDNYEFATVYKAINNFIATELSSFYLDIAK 723

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLED 742
           D +Y     +  RR+ Q+VL   L ++V+++API+PH A++++  +  A+T E+
Sbjct: 724 DVVYVEAPNNHARRAMQSVLFDTLNALVKLLAPIIPHTADEIFGYM--AWTTEE 775


>gi|301095723|ref|XP_002896961.1| isoleucyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262108608|gb|EEY66660.1| isoleucyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 1052

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/462 (45%), Positives = 290/462 (62%), Gaps = 35/462 (7%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLH 166
           + T++LP T F MRANA VREP++H        +   A+      FVLHDGPP+ANG+LH
Sbjct: 15  RQTLNLPATRFPMRANAAVREPQLHARCVS-AAYAEQAEDTTRPLFVLHDGPPFANGSLH 73

Query: 167 MGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRA 226
           MGH LNK LKDIINRY+LL+  +V+YVPGWDCHGLPIE K L  L   A  +L+P+++RA
Sbjct: 74  MGHFLNKTLKDIINRYQLLRGRRVQYVPGWDCHGLPIEHKALTMLQLSA-DELSPAQVRA 132

Query: 227 KAAKFAKATVKAQMASFKRYGVWADW----NNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
            + + A+  ++ Q   F+R+GV ADW    ++ YLT+ P YEA Q +V  +M   G I+R
Sbjct: 133 LSRQLARQAIQEQQKDFERWGVLADWSGAEDSVYLTMSPSYEARQYDVLKKMVHDGLIFR 192

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTS----GLLNEFLPDLG 338
           G KPV+WSPSSRTALAEAELEY + HVS + Y  F   S   +TS     +L ++   L 
Sbjct: 193 GFKPVYWSPSSRTALAEAELEYQDDHVSHAAYVKFHFASMGSNTSEQAASVLAKYGDRLS 252

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
             VWTTTPWT+P+N A+ VNA L+Y +V  ++       A A ++S    VLK       
Sbjct: 253 AVVWTTTPWTIPSNQALCVNADLEYVIVRPRNAYSCYLIASALQESF-ATVLKG------ 305

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
                     +A+   +L + +TL GSDLE   + HP+ +R+  VV+ G+++TT++GTG+
Sbjct: 306 ----------DAEEEVELEVLETLNGSDLEGAHFTHPLVDREA-VVLAGEHVTTDAGTGV 354

Query: 459 VHTAPGHGQEDYVTSLKYGLP------ILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVV 511
           VHTAPGHGQ+DY   + +         I+ PVD +G FT +AG+   GL VL +GN+AV+
Sbjct: 355 VHTAPGHGQDDYFAWMAHHSKPGEHPDIICPVDADGCFTSDAGRGLEGLCVLDEGNMAVI 414

Query: 512 KYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE 553
             L    +L+    Y H+YPYDWRTKKP I RAT QWFA ++
Sbjct: 415 DQLKYSGNLLSIGEYHHRYPYDWRTKKPVILRATAQWFARLD 456



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/194 (41%), Positives = 115/194 (59%), Gaps = 7/194 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P YGADVLR WV++ DYTGDV IGP V+ + SD  RK+R T R+LLGNL D+    +++ 
Sbjct: 703 PAYGADVLRFWVATTDYTGDVSIGPGVVGKASDALRKVRNTARFLLGNLQDFDPAHDAVP 762

Query: 634 YDDLPM-IDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLY 692
           Y  +P  +D+Y L ++  +  ++  +Y+++ F +    +  FI  DLS FY +  KDRLY
Sbjct: 763 YSKMPFSLDRYMLHEVNALAASVTAAYDAFAFNRAQHALSHFISTDLSAFYMEATKDRLY 822

Query: 693 TGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV---WQ-NLPFAYTLEDGSAAEF 748
                S TRRS QTVL   L ++ R +AP++PH AED+   W+  L     LED   + F
Sbjct: 823 CDAADSPTRRSAQTVLWLSLQALTRALAPVVPHTAEDIRLHWEAQLQGDIPLEDVPGSVF 882

Query: 749 VFESKWPVLDEKWR 762
             E  W    E+W+
Sbjct: 883 -LEQGWMPSAEEWK 895


>gi|256751721|ref|ZP_05492595.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749390|gb|EEU62420.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 932

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/467 (44%), Positives = 299/467 (64%), Gaps = 32/467 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y  T++LP+T F M+AN   REPEI K W++  ++ +  +KN G E ++LHDGPPYANG+
Sbjct: 3   YNKTLNLPRTDFPMKANLPTREPEILKRWEEMDIYHKTLEKNKGKEKYILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A+NK+LKDII +YK ++ Y   YVPGWD HGLPIE + +++L    + +++P++ 
Sbjct: 63  IHIGTAMNKVLKDIIVKYKTMRGYDAPYVPGWDTHGLPIEQQAIKTLG-IKRHEVSPTEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     FA + ++ Q A FKR GV  DW+NPYLTL+PEYEA QIEVFG+M+ +GYIY+G 
Sbjct: 122 RKVCRDFAFSQIEKQKAQFKRLGVRGDWDNPYLTLNPEYEAKQIEVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W PS  TALAEAE+EY +   S SIY  FR+        G++ E L ++   +WTT
Sbjct: 182 KPVYWCPSCETALAEAEIEYFD-ETSDSIYVKFRVKDDLGKFKGIV-ENLNNVYFVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           T WT+PAN A+A+N +  YA+ +      GD                       I+A D+
Sbjct: 240 TTWTIPANLAIALNPEFDYALAKF-----GDEV--------------------YIMAKDM 274

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + T++ +   +   I     G DLE  +  HP+ +R   ++I G+++T E+GTG VHTAP
Sbjct: 275 LDTVKKEANLSDYEIVAVFKGKDLEGMKATHPLYDRDS-LIILGEHVTLEAGTGCVHTAP 333

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED++   +YGL +L+P+DD+G FT++A  ++GL    + N  + + L +  +L+ E
Sbjct: 334 GHGEEDFLVGQEYGLDVLNPIDDKGYFTDKAPGYAGL-YYEEANKVIKEDLKKANALVAE 392

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H YP+ WR K P IFRATEQWFASVEGFR+ A+ AI +V W P
Sbjct: 393 TRITHSYPHCWRCKSPIIFRATEQWFASVEGFREEALKAIKEVNWYP 439



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 128/204 (62%), Gaps = 9/204 (4%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+    + + Y+
Sbjct: 618 YGADILRLWTVSADFTSDMRISQEILKQMTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYE 677

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  ID++AL++L  +VK + E+++ Y+++    ++  F +VD+S+ Y D+ KDRLYT  
Sbjct: 678 ELLEIDKWALYRLNRVVKELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYP 737

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG-SAAEFVFESKW 754
            TS  RR+ QT L   L ++VR+IAP+L   +E++W     +Y   D  +  E V  + W
Sbjct: 738 ATSKERRAAQTTLYIILDTLVRLIAPVLTFTSEEIW-----SYMKHDSQNNFESVQLADW 792

Query: 755 PVLDEKWRTFPVGEIYFWGKILEV 778
           P + EK+    +  I  W K+ ++
Sbjct: 793 PQVQEKYNNPYI--IEKWEKLFDI 814


>gi|345017877|ref|YP_004820230.1| isoleucyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|344033220|gb|AEM78946.1| Isoleucyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 932

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/467 (44%), Positives = 299/467 (64%), Gaps = 32/467 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y  T++LP+T F M+AN   REPEI K W++  ++ +  +KN G E ++LHDGPPYANG+
Sbjct: 3   YNKTLNLPRTDFPMKANLPTREPEILKRWEEMDIYHKTLEKNKGKEKYILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A+NK+LKDII +YK ++ Y   YVPGWD HGLPIE + +++L    + +++P++ 
Sbjct: 63  IHIGTAMNKVLKDIIVKYKTMRGYDAPYVPGWDTHGLPIEQQAIKTLG-IKRHEVSPTEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     FA + ++ Q A FKR GV  DW+NPYLTL+PEYEA QIEVFG+M+ +GYIY+G 
Sbjct: 122 RKVCRDFAFSQIEKQKAQFKRLGVRGDWDNPYLTLNPEYEAKQIEVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W PS  TALAEAE+EY +   S SIY  FR+        G++ E L ++   +WTT
Sbjct: 182 KPVYWCPSCETALAEAEIEYFD-ETSDSIYVKFRVKDDLGKFKGIV-ENLNNVYFVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           T WT+PAN A+A+N +  YA+ +      GD                       I+A D+
Sbjct: 240 TTWTIPANLAIALNPEFDYALAKF-----GDEV--------------------YIMAKDM 274

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + T++ +   +   I     G DLE  +  HP+ +R   ++I G+++T E+GTG VHTAP
Sbjct: 275 LDTVKKEANLSDYEIVAVFKGKDLEGMKATHPLYDRDS-LIILGEHVTLEAGTGCVHTAP 333

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED++   +YGL +L+P+DD+G FT++A  ++GL    + N  + + L +  +L+ E
Sbjct: 334 GHGEEDFLVGQEYGLEVLNPIDDKGYFTDKAPGYAGL-YYEEANKVIKEDLKKANALVAE 392

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H YP+ WR K P IFRATEQWFASVEGFR+ A+ AI +V W P
Sbjct: 393 TRITHSYPHCWRCKSPIIFRATEQWFASVEGFREEALKAIKEVNWYP 439



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 121/187 (64%), Gaps = 7/187 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+    + + Y+
Sbjct: 618 YGADILRLWTVSADFTSDMRISQEILKQMTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYE 677

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  ID++AL++L  +V+ + E+++ Y+++    ++  F +VD+S+ Y D+ KDRLYT  
Sbjct: 678 ELLEIDKWALYRLNRVVEELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYP 737

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG-SAAEFVFESKW 754
            TS  RR+ QT L   L ++VR+IAP+L   +E++W     +Y   D  +  E V  + W
Sbjct: 738 ATSKERRAAQTTLYIILDTLVRLIAPVLTFTSEEIW-----SYMKHDSQNNFESVQLADW 792

Query: 755 PVLDEKW 761
           P + EK+
Sbjct: 793 PQVQEKY 799


>gi|297544853|ref|YP_003677155.1| isoleucyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842628|gb|ADH61144.1| isoleucyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 932

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/468 (44%), Positives = 302/468 (64%), Gaps = 34/468 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y  T++LP+T F M+AN   REPEI K W++  ++ +  +KN G E ++LHDGPPYANG+
Sbjct: 3   YNRTLNLPRTDFPMKANLPTREPEILKKWEEMDIYHKTLEKNKGKEKYILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A+NK+LKDII +YK ++ Y   YVPGWD HGLPIE + +++L    + +++P++ 
Sbjct: 63  IHIGTAMNKVLKDIIVKYKTMRGYYAPYVPGWDTHGLPIEQQAIKTLG-IKRHEVSPTEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     FA + ++ Q A FKR GV  DW+NPYLTL+PEYEA QIEVFG+M+ +GYIY+G 
Sbjct: 122 RKVCRDFAFSQIEKQKAQFKRLGVRGDWDNPYLTLNPEYEANQIEVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W PS  TALAEAE+EY +   S SIY  FR+        G++++ L ++   +WTT
Sbjct: 182 KPVYWCPSCETALAEAEIEYFD-ETSDSIYVKFRVKDDLGKFKGIVDD-LNNVYFVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           T WT+PAN A+A+N +  YA+ +      GD                       I+A D+
Sbjct: 240 TTWTIPANLAIALNPEFDYALAKF-----GDEV--------------------YIMAKDM 274

Query: 405 VPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           + T+  EA  G   ++     G DLE  + +HP+ +R   ++I G+++T E+GTG VHTA
Sbjct: 275 LDTVKKEAHLGDYEIV-ALFKGKDLEGMKAIHPLYDRDS-LIILGEHVTLEAGTGCVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG+ED++   +YGL +L+P+DD+G FT++A  ++GL    + N  + + L +  +L+ 
Sbjct: 333 PGHGEEDFLVGQEYGLEVLNPIDDKGYFTDKAPGYAGL-YYEEANKVIKEDLKKANALVA 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E    H YP+ WR K P IFRATEQWFASVEGFR+ A+ +I +V W P
Sbjct: 392 ESHITHSYPHCWRCKSPIIFRATEQWFASVEGFRKEALKSIKEVNWYP 439



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 127/204 (62%), Gaps = 9/204 (4%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLW  S D+T D+ I  ++L+QM++ YRK+R T ++LL NL+D+    + + Y+
Sbjct: 618 YGADILRLWTVSADFTSDMRISKEILKQMTEAYRKIRNTSKFLLSNLYDFDPDKDMLPYE 677

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  ID++AL++L  +V+ + E+++ Y+++    ++  F +VD+S+ Y D+ KDRLYT  
Sbjct: 678 ELLEIDKWALYRLNRVVEELTEAFDKYEYYDFLHLVHTFCVVDMSSLYLDILKDRLYTYP 737

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDG-SAAEFVFESKW 754
             S  RR+ QT L   L ++VR+IAP+L   +E++W     +Y   D  +  E V  + W
Sbjct: 738 AASKERRAAQTTLYIILDTLVRLIAPVLTFTSEEIW-----SYMKHDSQNNFESVQLADW 792

Query: 755 PVLDEKWRTFPVGEIYFWGKILEV 778
           P + EK+    +  I  W K+ ++
Sbjct: 793 PEVQEKYNNPYI--IEKWEKLFDI 814


>gi|385831347|ref|YP_005869160.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
 gi|418039117|ref|ZP_12677426.1| Isoleucine--tRNA ligase [Lactococcus lactis subsp. cremoris CNCM
           I-1631]
 gi|326407355|gb|ADZ64426.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
 gi|354692477|gb|EHE92300.1| Isoleucine--tRNA ligase [Lactococcus lactis subsp. cremoris CNCM
           I-1631]
 gi|374673972|dbj|BAL51863.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis IO-1]
          Length = 932

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/470 (44%), Positives = 293/470 (62%), Gaps = 41/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MRA    +EP   K W D  ++ +  + N+G+ +F+LHDGPPYANG
Sbjct: 2   KIKDTLNLGKTAFPMRAGLPNKEPNWQKDWADATLYEKRQELNEGKPSFMLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII RYK +  ++  YVPGWD HGLPIE ++ ++  +  + DL    
Sbjct: 62  NIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLPIEQQLAKAGMKRKEMDLL--D 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              +  K+A   V  Q + FK  GV ADW+ PYLTL PEYEAAQI VFG+M+ +GYIY+G
Sbjct: 120 YLEECRKYAMKQVDMQRSDFKSLGVLADWDRPYLTLLPEYEAAQIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           +KP++WSPSS ++LAEAE+EY +   S SI+  F+       T G L E   D+   +WT
Sbjct: 180 QKPIYWSPSSESSLAEAEIEYQDVR-SASIFVAFKA----KDTKGKLPE---DVEFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P+N  +  +    Y+VV +                          + F+I AS+
Sbjct: 232 TTPWTIPSNLGIFAHPDYDYSVVAVNG------------------------RKFVI-ASE 266

Query: 404 LVPTLEAK--WGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           ++  +  K  W    V+ +T+ GS+LE     HP  +R+  +++  DY+T +SGTGLVH 
Sbjct: 267 MLEAVAEKLEWENPEVL-QTIKGSELEYMVAKHPFYDRET-LIMNADYVTLDSGTGLVHV 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY  S KY LP+LSP+D+ G +T+EA    GL    +GN  V K+L+E+ +L+
Sbjct: 325 APGHGEDDYFASRKYKLPVLSPIDNRGYYTDEAPGLEGL-FYDEGNKVVSKWLEEKDALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
             E + H YP+DWRTKKP IFRAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 384 KLEFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRQNILDEVERVDWVIP 433



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 112/185 (60%), Gaps = 6/185 (3%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP      +GAD+LRLWV+S+D   DV +   +L Q+S++YRK+R TLR+L+ N  D+  
Sbjct: 603 VPKDVTKKFGADILRLWVASIDTESDVRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNP 662

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++I + +L  +D+Y L +   +VK IR +Y++Y F  +++ I  FI  DLS+FY D A
Sbjct: 663 KEDAIDFAELRPVDKYMLVKFNELVKQIRTAYDNYSFMTVYKSIINFITNDLSSFYLDFA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLED 742
           KD +Y     S  RRS QTV+   L  +V+++ PILPH AE+ W  L      FAY  E 
Sbjct: 723 KDVVYIEAANSPERRSMQTVMYVILKDLVKILVPILPHTAEETWTYLEHEPENFAYLAEM 782

Query: 743 GSAAE 747
             AAE
Sbjct: 783 PEAAE 787


>gi|392987359|ref|YP_006485952.1| isoleucyl-tRNA synthetase [Enterococcus hirae ATCC 9790]
 gi|392334779|gb|AFM69061.1| isoleucyl-tRNA synthetase [Enterococcus hirae ATCC 9790]
          Length = 930

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/469 (43%), Positives = 295/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE +  K W++++++ +  + N+G+ +F+LHDGPPYANG
Sbjct: 2   KMKETLQLGKTKFPMRGNLPNREADWQKEWEENKIYQKRQELNEGKPSFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T S+
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGFRAPYVPGWDTHGLPIE-QVLAN-KGIKRKEMTMSE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              K  ++A + V  Q   FKR GV  DW +PY+TLDP YEAAQI VFG+M+ +GYIY+G
Sbjct: 120 YLEKCREYALSQVDKQREDFKRLGVAGDWEHPYVTLDPSYEAAQIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SI+  F +        GLL+E   D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIFVAFNVKDG----KGLLDE---DTAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN    Y ++E                        D +K   +VA D
Sbjct: 232 TTPWTLPANQGIAVNPTYTYVLIE-----------------------ADGRK--FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  ++ + G + + + K +AG ++E     HP   R+  +VI GD++T ++GTGLVHTA
Sbjct: 267 LLEKVQTEIGWSDVQVLKEIAGQEMEYMTAWHPFYERES-LVILGDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   +Y LP++SPVD +G +TEEA  F G+      N  +   L E+ +L+ 
Sbjct: 326 PGHGEDDYIAGNRYKLPVVSPVDSKGVYTEEAPGFEGV-FYDKANPMITDLLQEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  ++ + +V W+ P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASIDDFRQNILEEVEKVDWIIP 433



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 107/168 (63%), Gaps = 2/168 (1%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           +P +    +GAD+LRLWV+SVDY  DV +   +L Q++++YRK+R T+R+L+ N  D+  
Sbjct: 603 LPDKVIKQFGADILRLWVASVDYEADVRVSMDILSQVAEVYRKIRNTMRFLIANTEDFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDV 686
             ++IS+++L  +D+Y   +L  ++K IRE  YE Y F  I++ +  F+ VDLS FY D 
Sbjct: 663 QKDTISFEELRSVDKYMTIRLNEVIKEIREEGYEKYNFMHIYRTVMNFLTVDLSAFYLDF 722

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           AKD +Y      + RR  QTV     +++ +++ PI+PH AE++W  L
Sbjct: 723 AKDVVYIESENDYQRRCMQTVFYQTAVALTKLLTPIIPHTAEEIWSFL 770


>gi|444732259|gb|ELW72563.1| Isoleucyl-tRNA synthetase, mitochondrial [Tupaia chinensis]
          Length = 1013

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/473 (42%), Positives = 286/473 (60%), Gaps = 29/473 (6%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGP 158
           + G+Y+ TV LPKT+F M+     +   E EI +     +++    ++     F LHDGP
Sbjct: 57  DSGKYRDTVLLPKTSFPMKLLGRQQPDTELEIQQKCGFSELYSWQRERKVKTEFCLHDGP 116

Query: 159 PYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKD 218
           PYANG+ H+GHALNKILKDI NRY +++  K+ +VPGWDCHGLPIE+KVL  L   A+ +
Sbjct: 117 PYANGDPHVGHALNKILKDIANRYHMMKGSKIHFVPGWDCHGLPIEIKVLSELGGKAQ-N 175

Query: 219 LTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQG 278
           L+  ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+ +F QM  +G
Sbjct: 176 LSAVEIREKARAFAKAAIEKQKSAFIRWGIMADWNNCYYTFDRKYEAKQLRIFYQMYEKG 235

Query: 279 YIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG 338
            +YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F +   PP  + L++   P + 
Sbjct: 236 LVYRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLSKPPPKLASLIDGSSP-VS 294

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
             VWTT PWT+PAN AV    + +YA+V+  S   GD                     F 
Sbjct: 295 FLVWTTQPWTIPANQAVCYMPESKYAIVKCSS--SGD---------------------FY 331

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           I+A+D V ++ +  GT   +  T +G DLEN    HP+   +   ++  +++T   GTGL
Sbjct: 332 ILAADKVASIASTLGTTFEVISTFSGVDLENATCSHPLVPDKVSPLLPANHVTMTKGTGL 391

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQ 517
           VHTAP HG EDY  + ++ LP+   V++ G FT+ AG +     VL +G   V+K L   
Sbjct: 392 VHTAPAHGMEDYAVASQHSLPVDCLVNEAGIFTDVAGPELQNKSVLEEGTDVVIKMLQTA 451

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +L+ EE   H YPYDWRTKKP + RA++QWF ++   +  A + + +VK++P
Sbjct: 452 KNLLKEERLVHSYPYDWRTKKPVVIRASKQWFINITDIKTTAKELLKKVKFIP 504



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/189 (42%), Positives = 110/189 (58%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGAD LR WV+  +   +V IGP VL    D   KLR TLR+LLGN+  +    +SI 
Sbjct: 690 PPYGADTLRWWVAESNVFTEVTIGPSVLSAARDDISKLRNTLRFLLGNVAGFNPETDSIP 749

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
             ++ +IDQY L  L+++   I ++Y  Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 750 VKNMYVIDQYMLHLLQDLANKITDAYRQYDFGKVVRLLRAFYTRELSNFYFSIIKDRLYC 809

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L+  L  +VR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 810 EKENDPKRRSCQTALAEILDVLVRSFAPILPHLAEEVFQHIP--YLKEPKS----VFRTG 863

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 864 WISTSSIWK 872


>gi|403383412|ref|ZP_10925469.1| isoleucyl-tRNA synthetase 1 [Kurthia sp. JC30]
          Length = 926

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/469 (44%), Positives = 291/469 (62%), Gaps = 39/469 (8%)

Query: 104 GRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYAN 162
             YK T+ +PKT F MR N    EP++ + W +  +  +V ++  D   F+LHDGPPYAN
Sbjct: 2   AEYKKTLLMPKTDFPMRGNLPNMEPKMQEKWAEMDINAKVLERTKDRPAFILHDGPPYAN 61

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G++HMGHALNK+LKD+INR++ +  Y V YVPGWD HGLPIE + L +   D KK ++ +
Sbjct: 62  GDIHMGHALNKVLKDMINRHRSMTGYHVPYVPGWDTHGLPIE-QALTNKGHDRKK-MSIA 119

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R    ++A   V  Q   FKR GV  DW NPY+TL P +EA QI VFG+M+ +GYIY+
Sbjct: 120 EFRELCKEYALEQVSNQREQFKRIGVRGDWENPYITLRPAFEARQIGVFGEMAKKGYIYK 179

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WSPSS +ALAEAE+EY +   S SIY  F++        G+LN    D  + +W
Sbjct: 180 GLKPVYWSPSSESALAEAEIEYKDIK-SPSIYVAFKVADG----KGVLNN---DEEIVIW 231

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  ++VN + QY VV++           A++K               +VA 
Sbjct: 232 TTTPWTLPANLGISVNPEFQYVVVKV-----------ADRK--------------FVVAK 266

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +L+ T+  K G + V I + + G++LEN    HP+ +R   V++ GD++T E+GTG VHT
Sbjct: 267 ELLNTVAEKIGWEDVQIDREVGGAELENITAKHPLFDRTSLVML-GDHVTLEAGTGCVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY    +YGL ILS VD+ G  T+ AG+F+G       N  + + L+E  +L+
Sbjct: 326 APGHGEDDYQVGKRYGLEILSVVDNRGILTDAAGEFAG-QFYDKANKPICEKLEELGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               +EH YP+DWRTKKP IFRAT QWFAS++ FR   + AI    + P
Sbjct: 385 SLTFFEHSYPHDWRTKKPVIFRATPQWFASIDKFRPELLQAIRDTNFTP 433



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 128/195 (65%), Gaps = 3/195 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV- 628
           P +    YGAD+LR+WV+SVDYT DV I   +L+Q+S++YRK+R TL+++ GNLHD+ V 
Sbjct: 604 PAKIMQQYGADILRMWVASVDYTADVRISMDMLKQVSEMYRKVRNTLKFVHGNLHDFNVE 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + + Y+DL  +DQY   +L+ ++K +R +Y+ Y+F  +++ +  FI  +LS+FY D+AK
Sbjct: 664 TDYVQYEDLREVDQYMYMELQKLIKTVRAAYDKYEFATVYKAVNNFIATELSSFYLDIAK 723

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP--FAYTLEDGSAA 746
           D +Y     S  RR+ Q+V+   L ++V+++API+PH A++++  +    A +++     
Sbjct: 724 DVVYVEAPNSHARRAMQSVMHDTLDALVKLLAPIIPHTADEMYGYMADTTAESVQLTDMP 783

Query: 747 EFVFESKWPVLDEKW 761
           + V +  +  L EKW
Sbjct: 784 DAVEKENFAALTEKW 798


>gi|406669223|ref|ZP_11076503.1| isoleucine-tRNA ligase [Facklamia ignava CCUG 37419]
 gi|405584020|gb|EKB57946.1| isoleucine-tRNA ligase [Facklamia ignava CCUG 37419]
          Length = 927

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/472 (44%), Positives = 292/472 (61%), Gaps = 43/472 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L +T F MRAN   +E  + + W+   ++ ++  KN+G+  F+LHDGPPYANG
Sbjct: 2   KVKDTLHLGQTKFDMRANLPQKEVALQEEWEKESIYQKIQQKNEGKPTFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            LHMGHALNKI KD I RY  +  ++  YVPGWD HGLPIE  ++ S D+  +K L+ ++
Sbjct: 62  QLHMGHALNKISKDFIVRYYSMNGHRAPYVPGWDTHGLPIEQALVNS-DKVDRKSLSTAE 120

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   V+ Q A FKR GV  DW++PYLTL PEYEA Q+ VFG+M+ +GYIY+G
Sbjct: 121 FRKLCEAYALKQVENQKADFKRLGVTGDWDHPYLTLTPEYEAQQLRVFGKMAERGYIYKG 180

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-LAVW 342
            KP++WSPSS ++LAEAE+EY +   S SIY  F      P  SG  +  +PD     +W
Sbjct: 181 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAF------PVRSG--SGVVPDHAEFVIW 231

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  ++V  +  Y  VE+ +                        ++F IVA 
Sbjct: 232 TTTPWTLPANLGISVLGEATYVAVEVGT------------------------RIF-IVAK 266

Query: 403 DLVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           DL+ T+  E  W    V+K+   G++ +  +  HP  +R   V++ GD++T ESGTGLVH
Sbjct: 267 DLLETIANEIGWENYQVVKE-YQGAEFDRLKVKHPFYDRDSLVMV-GDHVTLESGTGLVH 324

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG++D++   +YGL +LSPVD+ G FT+EA  F G+  L  G   V+K ++E  +L
Sbjct: 325 TAPGHGEDDFIIGQRYGLEVLSPVDNRGHFTDEAPGFEGMFYL-KGQKEVLKIIEENGTL 383

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQVKWVPP 571
           +     EH YP+DWRTK+P IFRAT QWFAS++ FR   +DA+  +V W  P
Sbjct: 384 LYLSEIEHSYPHDWRTKQPVIFRATPQWFASIDKFRDQLLDAVENEVTWYHP 435



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 124/217 (57%), Gaps = 6/217 (2%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQE-APGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           ++G  Q    +IG V  + P+E     GAD++RLWVSSVDY  DV I   +L Q+++ YR
Sbjct: 589 MDGKGQKMSKSIGNV--ITPEEITQDLGADIIRLWVSSVDYENDVRISRDILNQVAEAYR 646

Query: 611 KLRGTLRYLLGNLH-DWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           K+R T R++L N+  D+    + +  +++  +D+Y + Q   +V ++ E+Y  Y+F +++
Sbjct: 647 KIRNTFRFILSNIEADFDPAVDCVQEEEMEPVDRYMMSQYRLLVHDMHEAYTHYEFNRVY 706

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           + +  F+ VDLS FY D+AKD +Y     +  RRS QTV    L  + R++ PIL H  E
Sbjct: 707 KRLINFVTVDLSAFYSDIAKDIVYIEQMNNRKRRSIQTVFYEILSGLTRMLTPILLHTME 766

Query: 729 DVWQNLPFAYT-LEDGSAAEFVFESKWPVLDEKWRTF 764
           ++WQ +P A   ++      FV       L ++W TF
Sbjct: 767 EIWQFIPGAENYIQLQEMPHFVNVDADQELVDQWETF 803


>gi|257877587|ref|ZP_05657240.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257811753|gb|EEV40573.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 929

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/468 (44%), Positives = 292/468 (62%), Gaps = 41/468 (8%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGNL 165
           K T+ L KT F MR N   RE +  K W++++++ R  + N+G+  FVLHDGPPYANGN+
Sbjct: 2   KETLHLGKTAFPMRGNLPNREVDWQKEWEENRLYQRRQELNEGKPTFVLHDGPPYANGNI 61

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K+++ ++ R
Sbjct: 62  HIGHSLNKISKDIIVRSKSMSGFRSPYVPGWDTHGLPIE-QVLTN-KGIKRKEMSLAEYR 119

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            K  ++A   V  Q A FKR GV  DW +PY+TL P+YEAA+I VFG+M+ +GYIY+G K
Sbjct: 120 KKCEEYALTQVDTQRADFKRLGVSGDWEHPYITLTPDYEAAEIRVFGKMAEKGYIYKGLK 179

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           P++WSPSS ++LAEAE+EY +   S SIY  F +         LL+    D    +WTTT
Sbjct: 180 PIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFPVADG----KDLLDS---DTSFVIWTTT 231

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN  ++VN    Y                         +L D +K   +VA DL+
Sbjct: 232 PWTLPANLGISVNPTFAYV-----------------------QILADGRK--FVVAKDLL 266

Query: 406 PTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
            T+  E  W +  V+++ LAG  LE     HP  +R   +++ GD++T ++GTGLVHTAP
Sbjct: 267 ETVTNEIGWESVEVLQE-LAGDQLEKMTAQHPFYDRTSLLML-GDHVTLDAGTGLVHTAP 324

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++DY+ S KYGL +LSPVD  G FTEEA  F G+      N  + + L+E+ +L+  
Sbjct: 325 GHGEDDYIVSKKYGLDVLSPVDSRGVFTEEAPGFEGV-FYDKANPMITELLEEKGALLKL 383

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
             + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D I +V W+ P
Sbjct: 384 NFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQNILDEIEKVDWIIP 431



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 106/159 (66%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVDY  DV +   +L Q+S++YRK+R T+R+LL N +D+    +S+ +++
Sbjct: 610 GADILRLWVSSVDYEADVRVSMDILNQVSEVYRKIRNTMRFLLANTNDFDPAKDSVPFEN 669

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y + +L   +K IRE  YE Y F  I++ +  F+ VD+S+FY D AKD +Y   
Sbjct: 670 LRSVDKYMMVRLNQTIKTIREDGYEKYNFLHIYRTVINFLTVDMSSFYLDFAKDVVYIEA 729

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              F RR+ QTV     +++ +++ PI+PH AE++W +L
Sbjct: 730 ENDFQRRAMQTVFYQTAVALTKLLTPIIPHTAEEIWSHL 768


>gi|20808023|ref|NP_623194.1| isoleucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|81481385|sp|Q8R9L3.1|SYI_THETN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|20516600|gb|AAM24798.1| Isoleucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 932

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/467 (44%), Positives = 295/467 (63%), Gaps = 32/467 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y  T++LPKT F M+AN  VREPEI K W++  ++ RV +KN G E ++LHDGPPYANG+
Sbjct: 3   YNKTLNLPKTDFPMKANLPVREPEILKKWEEMDIYRRVLEKNKGKEKYILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A+NK+LKDI+ +YK ++ Y   YVPGWD HGLPIE +V++ L    + ++ P + 
Sbjct: 63  IHIGTAMNKVLKDIVVKYKTMRGYDSPYVPGWDTHGLPIEQQVIKILGV-KRHEMNPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     FA + ++ Q   FKR GV  DW  PYLTLDPEYEA QIEVFG+M+ +GYIY+G 
Sbjct: 122 RKVCKDFAFSQIERQRQQFKRLGVRGDWEKPYLTLDPEYEAKQIEVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W PS  TALAEAE+EY +   S SIY  FR+        G++ E L ++   +WTT
Sbjct: 182 KPVYWCPSCETALAEAEIEYFD-ETSDSIYVKFRVRDDLGKFKGIV-EDLSNVYFVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           T WT+PAN A+A+N +  Y++ +      GD                       I+A D+
Sbjct: 240 TTWTIPANLAIALNPEFDYSLTKF-----GDEV--------------------YIIAKDM 274

Query: 405 VPTLEAKWGT-KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           +  +  + G     I  T  G +LE  + VHP+ NR   VV+ G+++T ++GTG VHTAP
Sbjct: 275 IEEVRKETGLGDYEILATFKGKELEGMKAVHPIYNRDSIVVL-GEHVTLDAGTGCVHTAP 333

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED++   +YGL  L+P+D++G FT++A  + GL    + N  + + L +  +L+ E
Sbjct: 334 GHGEEDFLVGQEYGLEALNPIDEKGYFTDKAPGYEGL-YYAEANKVIKEDLRKANALLAE 392

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +   H YP+ WR K P +FRATEQWFASVEGFR+ A+ AI +V W P
Sbjct: 393 KKITHSYPHCWRCKSPILFRATEQWFASVEGFREEALKAIKEVNWYP 439



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 134/212 (63%), Gaps = 8/212 (3%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    ++G V  V P E    YGADVLRLWV S DYT D+   P++L+Q++++YR
Sbjct: 594 VDGEGRKMSKSLGNV--VDPAEVIQEYGADVLRLWVVSADYTADMRTSPEILKQIAEVYR 651

Query: 611 KLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+LLGNL+D+    + + Y++L  ID++AL++L  +VK + ES++ Y+F+  F 
Sbjct: 652 KIRNTARFLLGNLYDFDPDKDMLPYEELLEIDKWALYRLNRLVKQLTESFDKYEFYDFFH 711

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F +VD+S+ Y D+ KDRLYT    S  R++ QT L   L ++V+++AP+L   +E+
Sbjct: 712 PVHNFCVVDMSSLYLDILKDRLYTYPAKSKERKAAQTTLYIILDTLVKLMAPVLAFTSEE 771

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKW 761
           +W ++      +  +  E V  + WP + E++
Sbjct: 772 IWWHMKH----DRNNNFESVQLADWPQVKEEY 799


>gi|257081256|ref|ZP_05575617.1| isoleucyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256989286|gb|EEU76588.1| isoleucyl-tRNA synthetase [Enterococcus faecalis E1Sol]
          Length = 933

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 294/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 9   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 69  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 127 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +V       GLL+    +    +WT
Sbjct: 187 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVVDG----KGLLDN---ETAFVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 239 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 273

Query: 404 LVPTL-EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T+ EA    ++ + +  +G  L+     HP  +R   V+I GD++T ++GTGLVHTA
Sbjct: 274 LLATVKEAISWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVMI-GDHVTLDAGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 333 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 392 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 777


>gi|255003795|ref|NP_001157270.1| isoleucyl-tRNA synthetase, mitochondrial [Danio rerio]
          Length = 983

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 202/472 (42%), Positives = 290/472 (61%), Gaps = 33/472 (6%)

Query: 104 GRYKHTVDLPKTTFGMRANA---LVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY++TV LP+T F ++ N    L +E +I +     Q++    +K   + + LHDGPPY
Sbjct: 29  GRYRNTVLLPRTDFPIKVNGPSLLEQEIKIQQKCGFDQLYKWQREKKAKKEYCLHDGPPY 88

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+++L+  +V YVPGWDCHGLPIELK L  L      +LT
Sbjct: 89  ANGDPHVGHALNKILKDIRNRFEVLRGRQVHYVPGWDCHGLPIELKALGDL---GTNELT 145

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
           P ++R KA +FA+  +  Q A+F+R+GV ADW+N Y T D +YEAAQ++VF +M  +G I
Sbjct: 146 PVQIRQKAREFAEKAISRQRAAFQRWGVMADWDNCYYTFDGKYEAAQLKVFQEMHNKGLI 205

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           Y+  KPV WSPSSRTALAEAELEY   HVSRS+Y  F +++ P   +    E L ++   
Sbjct: 206 YQDYKPVFWSPSSRTALAEAELEYNPEHVSRSLYITFPLLTLPAKLTAKA-EGLSNVSAL 264

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTT PWT+PAN AV    K+QY+VV+                       +   +  ++V
Sbjct: 265 IWTTQPWTIPANQAVCYMPKVQYSVVK-----------------------RADTEQLLLV 301

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHP-VDNRQCPVVIGGDYITTESGTGLV 459
           A++ + +L +   T L    T AG+DLE     HP + +++ P ++   ++T   GTGLV
Sbjct: 302 ATERINSLSSLLKTNLESLVTFAGTDLEGGVCQHPTIPSKEVP-LLPASHVTMTKGTGLV 360

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQM 518
           HTAP HG +DY  +  + LP+   VD+EG+FTE AG +     V+ +GN AV+  L    
Sbjct: 361 HTAPAHGMDDYSVATHFNLPVECMVDEEGRFTELAGAELQNKSVMDEGNAAVISVLQAAG 420

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +++ EE   H YPYDWRTK+P + RA+ QWF +    +  A DA+ +V+ +P
Sbjct: 421 AVVKEEDCVHSYPYDWRTKQPVVIRASRQWFINTATLKDKAKDALQKVRVIP 472



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 104/190 (54%), Gaps = 7/190 (3%)

Query: 574 APGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSI 632
           +P YGADVLR WV+  +   +V IGP  L    D   KLR TL++LLGNL  +     ++
Sbjct: 657 SPPYGADVLRWWVAESNVFSEVQIGPNALNAAKDSINKLRNTLKFLLGNLQGFDPRSQAV 716

Query: 633 SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLY 692
               +  IDQY L  L      + ++Y  + +  + +++Q F   +LSNFYF + KDRLY
Sbjct: 717 DPKQMHYIDQYMLHLLREFSMKVTDAYSEFNYGLVIRLLQSFTARELSNFYFSIIKDRLY 776

Query: 693 TGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFES 752
                S  RRSCQTVL   L  + R IAP+LPHLAE+V+ + P     ++G+    +F S
Sbjct: 777 CDPEDSVGRRSCQTVLEEILDGVSRSIAPVLPHLAEEVYLHAP---GHDEGNT---LFRS 830

Query: 753 KWPVLDEKWR 762
            W      WR
Sbjct: 831 GWINTSPVWR 840


>gi|126307099|ref|XP_001375630.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial [Monodelphis
           domestica]
          Length = 1017

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/473 (42%), Positives = 284/473 (60%), Gaps = 29/473 (6%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGP 158
           E G+Y+ TV LPKT+F M+     +   E EI +     +++     +N  + F LHDGP
Sbjct: 61  EGGKYRETVLLPKTSFPMKLVGREQTDMELEIQQKCGFSELYSWQRKRNVKQEFCLHDGP 120

Query: 159 PYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKD 218
           PYANG  H+GHALNK+LKDI NR+++++  KV +VPGWDCHGLPIELK L  L E A+ +
Sbjct: 121 PYANGEAHVGHALNKVLKDISNRFQMMRGLKVHFVPGWDCHGLPIELKALSELGEKAQ-N 179

Query: 219 LTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQG 278
           L+P ++R KA  FA+A ++ Q ++F R+G+ ADWNN Y T D +YEA Q+++F QM  + 
Sbjct: 180 LSPMEIRKKARAFAEAAIEKQKSAFIRWGIMADWNNCYHTFDGKYEAQQLKIFYQMYAKD 239

Query: 279 YIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG 338
            IYR  KPV WSPS+RTALAEAELEY   H+SRS+Y  F +V  PP  + +L+   P + 
Sbjct: 240 MIYRAYKPVFWSPSARTALAEAELEYNPKHISRSVYVKFPLVKPPPLLASVLDGLSP-VS 298

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
             +WTT PWT+PAN AV    + +Y++++  +  E                       F 
Sbjct: 299 AIIWTTQPWTIPANQAVCYMPEAKYSIIKCANSGE-----------------------FY 335

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           IV +D V +     GT+  +  T  G+DLE+    HP    +   ++  +++T   GTGL
Sbjct: 336 IVGADKVQSTATALGTQFEVISTFLGADLESASCAHPTIADKVSPLLPANHVTMSKGTGL 395

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQ 517
           VHTAP HG EDY  +  + LP    VD+ G FTE AG+     +VL +G   V+K L+  
Sbjct: 396 VHTAPAHGMEDYSVASMHKLPTDCLVDENGIFTEAAGRELQNKNVLEEGVDIVIKMLEST 455

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +L+ EE   H YPYDWRTKKP I R + QWF  +E    +A +++ +VK++P
Sbjct: 456 KNLLKEEQVTHSYPYDWRTKKPVIIRPSMQWFIKIENMFASAQESLKKVKFLP 508



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 78/189 (41%), Positives = 111/189 (58%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YG D+LR W++  +   +V IGP++L    D   KLR TLR+LLGNL D+    +++S
Sbjct: 694 PPYGVDILRWWIAESNIFNEVKIGPRILNAARDDINKLRNTLRFLLGNLADFNPETDAVS 753

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
             ++ +IDQY L  L++    I E+Y  + F K+ +++Q F    LSNFYF + KDRLY 
Sbjct: 754 IKNMYIIDQYMLHLLQDFGNKITEAYRQFDFGKVVRLLQAFYPSQLSNFYFSIVKDRLYC 813

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L+  L  +VR IAPILPHLAE+V+Q++P+          + VF S 
Sbjct: 814 EKEDDPKRRSCQTALAEILDVMVRSIAPILPHLAEEVYQHIPYE------KEPKSVFRSG 867

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 868 WISTSSLWK 876


>gi|196008044|ref|XP_002113888.1| hypothetical protein TRIADDRAFT_26821 [Trichoplax adhaerens]
 gi|190584292|gb|EDV24362.1| hypothetical protein TRIADDRAFT_26821 [Trichoplax adhaerens]
          Length = 850

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 214/468 (45%), Positives = 287/468 (61%), Gaps = 28/468 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           Y   ++LP+T F +RANA  R+ EI +      ++     +   + F LHDGPPYANG+L
Sbjct: 32  YADNLNLPQTLFPLRANAAFRDLEIQESTGFDSLYEWQRQRETQKEFSLHDGPPYANGDL 91

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGH LNK+LKDIINR+K+LQ YKV Y PGWDCHGLPIELK L+  + D  K +   ++R
Sbjct: 92  HMGHLLNKVLKDIINRHKVLQGYKVHYKPGWDCHGLPIELKALKGDNYDNNK-MPAIQIR 150

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
             A  FA+AT++ QM SFKR+GV A+WN+ Y T D +YEA Q++VF +M  +GYIYRG K
Sbjct: 151 ETAKAFAEATIEEQMKSFKRWGVMANWNDVYKTTDKDYEANQLQVFYEMYKKGYIYRGYK 210

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE-FLPDLGLA-VWT 343
           PV WSPSS+TALAEAELEY + + SR++Y  F + + P    G+  + FL +L  A VWT
Sbjct: 211 PVFWSPSSKTALAEAELEYKD-YTSRAVYVKFPVNTLPGGVFGIDGKAFLTNLTYALVWT 269

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P N AV  +  L+Y   E             N K+          +V+  V +D
Sbjct: 270 TTPWTIPFNEAVCYHPSLKYCFAE-------------NPKT---------AEVY-CVCTD 306

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           L+P +E    TKL    +  G +L+     HP+   +   ++ G ++T ESGTGLVHTAP
Sbjct: 307 LLPKVEDILNTKLTRFLSNIGQELDGMVCGHPLYRDKISPLLPGIHVTKESGTGLVHTAP 366

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIM 522
            HG +DY  S  Y L +   VD +G +TE+AG +  G  VLGDGN A ++ L +  +L+ 
Sbjct: 367 AHGIDDYNISRIYELSLDCAVDKDGLYTEDAGSELEGKYVLGDGNNAALELLRDSGNLLH 426

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E  Y H+YP+DWRTKKP I RAT+QWF    G  Q A   I  +K  P
Sbjct: 427 ESDYVHRYPHDWRTKKPVILRATKQWFTMTSGLMQQAKANIFSLKMYP 474



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 90/161 (55%), Gaps = 2/161 (1%)

Query: 576 GYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISY 634
           G GADVLRLWV++  Y  D+     +L +  +  RK+R + R+LLGNL+D+ +  N + +
Sbjct: 656 GLGADVLRLWVAASGYAADLSCSNSILERFGESLRKVRNSARFLLGNLYDFNIASNEVEH 715

Query: 635 DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTG 694
           + +  IDQY L +     ++   SY++ QF    + I  F+  DL+  YF+  KDRLY  
Sbjct: 716 NQMLEIDQYVLHRTLKFYEDTISSYDNMQFAPATRHIMNFVNTDLAT-YFEAIKDRLYAE 774

Query: 695 GTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
            +    RRS QT L   L  + R I P+ PHLAE++    P
Sbjct: 775 SSNGILRRSAQTSLFHILDVLTRAIGPVTPHLAEEICTFAP 815


>gi|424679103|ref|ZP_18115934.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV103]
 gi|424682305|ref|ZP_18119080.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV116]
 gi|424684052|ref|ZP_18120780.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV129]
 gi|424686881|ref|ZP_18123543.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV25]
 gi|424690049|ref|ZP_18126585.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV31]
 gi|424692291|ref|ZP_18128794.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV37]
 gi|424698029|ref|ZP_18134337.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV41]
 gi|424700556|ref|ZP_18136740.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV62]
 gi|424716270|ref|ZP_18145583.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV68]
 gi|424729460|ref|ZP_18158061.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV81]
 gi|424735077|ref|ZP_18163550.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV85]
 gi|424757104|ref|ZP_18184868.1| isoleucine--tRNA ligase [Enterococcus faecalis R508]
 gi|402349355|gb|EJU84306.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV116]
 gi|402349384|gb|EJU84334.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV103]
 gi|402362988|gb|EJU97498.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV129]
 gi|402365183|gb|EJU99609.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV31]
 gi|402366588|gb|EJV00958.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV25]
 gi|402373647|gb|EJV07718.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV62]
 gi|402373938|gb|EJV07986.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV41]
 gi|402378682|gb|EJV12520.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV37]
 gi|402388463|gb|EJV21902.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV68]
 gi|402393914|gb|EJV27120.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV81]
 gi|402404694|gb|EJV37310.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV85]
 gi|402407632|gb|EJV40149.1| isoleucine--tRNA ligase [Enterococcus faecalis R508]
          Length = 933

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/469 (43%), Positives = 294/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 9   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 69  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 127 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +V       GLL+    +    +WT
Sbjct: 187 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVVDG----KGLLDN---ETAFVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 239 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 273

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 274 LLSTVKEAIGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 333 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 392 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 777


>gi|332686281|ref|YP_004456055.1| isoleucyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332370290|dbj|BAK21246.1| isoleucyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 928

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/470 (44%), Positives = 287/470 (61%), Gaps = 41/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++ +++ +    N+G+ +FVLHDGPP+ANG
Sbjct: 2   KIKDTLQLGKTAFPMRGNLPTREVEWQKEWEEKKLYEKRQQLNEGKPSFVLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHALNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K+L+ ++
Sbjct: 62  NIHLGHALNKISKDIIVRAKAMSGFRSPYVPGWDTHGLPIE-QVLANKGV-KRKELSLAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR G+  DW NPYLTLDP YEAA++ VFG+M+  GYIY+G
Sbjct: 120 YREKCKEYALSQVDKQREDFKRLGISGDWQNPYLTLDPVYEAAEVRVFGKMAELGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F++V       GLL+    D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDIK-SPSIYVAFKVVDG----KGLLD---TDTSFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN    Y  +++                         KK   +VA D
Sbjct: 232 TTPWTLPANEGIAVNPDFDYVAIDVNG-----------------------KKY--VVAKD 266

Query: 404 LVPTLEAK--WGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+ T+     W    +I KT  G +LE     HP   R   VV+ GD++T ++GTGLVHT
Sbjct: 267 LLSTVADTIGWENPRII-KTFKGKELECMTAQHPFYERTSLVVL-GDHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY+   KY L ILSP+D  G  T+EA  F G+      N  V++ L E+ +L+
Sbjct: 325 APGHGEDDYLVGKKYNLEILSPIDSRGMLTKEAPGFEGV-FYDKANPMVIELLKEKGTLL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
             + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  ++ I  V W+ P
Sbjct: 384 KLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQDILNNIKTVDWIIP 433



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 107/166 (64%), Gaps = 2/166 (1%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           +P +     GAD+LRLWV SVDY  DV +   +L+Q+++IYRK+R T+R+LL N  D+  
Sbjct: 603 LPEKVIKQLGADILRLWVISVDYEADVRVSMDILKQVAEIYRKIRNTMRFLLANTDDFDP 662

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDV 686
             N + Y++L  +D+Y + +L  ++K IRE  YE Y F +I++ I  F+ VDLS+FY D 
Sbjct: 663 NKNKVHYNELRSVDKYMMIRLNQVIKEIREEGYEKYNFLRIYRQITNFLTVDLSSFYLDF 722

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQ 732
           AKD +Y     ++ RR  QTV     ++I ++++PI P  +E++WQ
Sbjct: 723 AKDVVYIEAENNYQRRCMQTVFYQIAVTITKLLSPIFPFTSEEIWQ 768


>gi|422699562|ref|ZP_16757426.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1342]
 gi|315171940|gb|EFU15957.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1342]
          Length = 933

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/469 (43%), Positives = 294/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 9   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 69  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 127 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +V       GLL+    +    +WT
Sbjct: 187 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVVDG----KGLLDN---ETAFVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 239 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 273

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 274 LLATVKEAIGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 333 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 392 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QT+    L+S+ +++ PI+PH AE++W  L
Sbjct: 739 ENDYQRRCMQTIFYQTLVSLTKLLTPIIPHTAEEIWSFL 777


>gi|257083914|ref|ZP_05578275.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|422694610|ref|ZP_16752601.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4244]
 gi|422698171|ref|ZP_16756091.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1346]
 gi|256991944|gb|EEU79246.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|315147954|gb|EFT91970.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4244]
 gi|315173283|gb|EFU17300.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1346]
          Length = 933

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/469 (43%), Positives = 294/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 9   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 69  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 127 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +V       GLL+    +    +WT
Sbjct: 187 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVVDG----KGLLDN---ETAFVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 239 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 273

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 274 LLATVKEAIGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 333 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 392 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 777


>gi|385799639|ref|YP_005836043.1| isoleucyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
 gi|309389003|gb|ADO76883.1| Isoleucyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 931

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/468 (41%), Positives = 279/468 (59%), Gaps = 33/468 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T++LP T F MRAN   RE +  KLW + +++ +  +  +G   F+LHDGPPYANG+
Sbjct: 3   YKETINLPNTDFPMRANLSEREVDFQKLWQEKEIYEKAVENREGNKPFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKD + R+  L  Y   Y+PGWD HGLPIE +V   + +  + D++ ++L
Sbjct: 63  IHIGHALNKILKDFVTRFATLNGYYSPYIPGWDTHGLPIEYQVTSEMSDQERADISIAEL 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   +A   V  Q   FKR GVW +W+NPYLTL+ EYE  QIEVFG+M+ +   YRGK
Sbjct: 123 REKCTNYALKYVDRQKEQFKRLGVWGEWDNPYLTLNKEYEVKQIEVFGEMAKKDLFYRGK 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPVHW P   TALAEAE+E+ E     SIY  F ++         L+    D  + +WTT
Sbjct: 183 KPVHWCPHCETALAEAEVEHGEDRAP-SIYVKFPLIDEFEVGGVELSS--EDSYIVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+  + +  Y VVE     EGD                      +++A DL
Sbjct: 240 TPWTIPSNMAITFHPEFPYVVVE----AEGDK---------------------LVMAKDL 274

Query: 405 VPTLEAKWGTK--LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           V T+ A    +   +I +  +   LEN +  HP+ +R+  ++I G+++T + G+G VHTA
Sbjct: 275 VETVMANSEIEDYEIISEEFSAKKLENKKAKHPIIDRE-SLLILGEHVTLDQGSGCVHTA 333

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG +DY+   +YGL I +P+D++G FTEEAG F+G     + N+ V   L E+  L+ 
Sbjct: 334 PGHGHDDYIVGQEYGLEIYAPMDNKGYFTEEAGDFAG-KYYDEANIMVTDKLKEKDLLMN 392

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               +H+YP+ WR K   IFRAT+QWFAS++  ++  + AI  V W P
Sbjct: 393 LNFIDHQYPHCWRCKGNLIFRATDQWFASIDAIKEETLAAIADVDWYP 440



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 132/210 (62%), Gaps = 8/210 (3%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +    YGAD+LRLWV+S D+  D+ +   +L+Q S+ YR++R T R++LGN+ D+   
Sbjct: 613 PHKVIDQYGADILRLWVASSDFKNDIRVSDNILKQSSEAYRRIRNTYRFILGNISDFDSD 672

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            N + Y+D   +D++ + +L++++K I  +YESY++ +++  +  F  V++S+ Y D+ K
Sbjct: 673 QNYVEYEDRRELDRWIMIRLQDLIKKITSAYESYEYHRVYHDVHNFCTVEMSSLYMDITK 732

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 748
           DRLYT GT S +RRS Q+ L   L++++  +API+PH +E+VWQ LP     E   A E 
Sbjct: 733 DRLYTDGTDSLSRRSAQSTLYDILMALMVTLAPIVPHTSEEVWQFLP-----EKMKAEES 787

Query: 749 VFESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           VF + WP + + +  +    I  W K+L +
Sbjct: 788 VFLTDWPEVKKNY--YDQELIAKWDKLLAI 815


>gi|260891264|ref|ZP_05902527.1| isoleucine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260859291|gb|EEX73791.1| isoleucine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 930

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/525 (40%), Positives = 313/525 (59%), Gaps = 56/525 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF-VLHDGPPYANGN 164
           Y  T++LPKT+F M+AN   +EP   + W   +++ +    N+G  F VLHDGPPYANG+
Sbjct: 13  YAKTLNLPKTSFKMKANLAQKEPLTLRDWKKAEIYEKSL--NEGAPFFVLHDGPPYANGD 70

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII +YK L+ Y   Y+PGWD HGLPIE K+++ L E A K++TP ++
Sbjct: 71  IHIGHALNKILKDIILKYKRLRGYNAPYIPGWDTHGLPIEWKIMEELGEKA-KNMTPLQI 129

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  K+A   V+ Q   FKR G+  +W+NPY+TL PEYEA Q++VF ++   GY+Y+G 
Sbjct: 130 RQECKKYALKWVEKQKEGFKRLGILGNWDNPYITLMPEYEAEQLKVFKEIYENGYVYKGL 189

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF-LPDLGLAVWT 343
           KPV+WSP++ TALAEAE+EY +   S SIY  F        T  LL++  + +  + +WT
Sbjct: 190 KPVYWSPTTETALAEAEIEYKDVE-SHSIYVKFE------GTQDLLDKLGVEEASILIWT 242

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  V ++ +  Y +                 K+  GN         +++A +
Sbjct: 243 TTPWTLPANLGVFLHPEFDYGLY----------------KTEKGN---------LVLAKE 277

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           L  T+    G    + K   G++LE   Y HP  +R+  V++ GDY+T ++GTG VH+AP
Sbjct: 278 LAETVFNTLGISYELLKEFKGTELEKTHYRHPFLDREGLVML-GDYVTADAGTGAVHSAP 336

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG +DY  S KY L +LSPVDD G  T+EAGK+ G+      NV +V+ L E   L+  
Sbjct: 337 GHGADDYNYSRKYELGVLSPVDDRGHMTKEAGKYEGMFYAKASNV-IVQDLTESGHLLHH 395

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPP---------- 571
             + H YP+DWR+KKP IFRATEQWF SV+    R+ A+ A+  V++VP           
Sbjct: 396 SKFVHSYPHDWRSKKPVIFRATEQWFISVDESDIRENAIKALDDVEFVPSWGKNRIGSML 455

Query: 572 QEAPGYGADVLRLWVSSVDY-----TGDVMIGPQVLRQMSDIYRK 611
           +  P +     R+W   +       T +V+  P+++ ++ ++ +K
Sbjct: 456 ETRPDWTISRQRVWGVPIPLFYNRATDEVIYEPEIMDRVIEMVKK 500



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 85/187 (45%), Positives = 121/187 (64%), Gaps = 6/187 (3%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           +P      YGAD+LRLWVSSVDY  DV I   +L+QMSD YR++R T R+L+GNL+D+  
Sbjct: 616 LPKDITEKYGADILRLWVSSVDYREDVRISENILQQMSDAYRRIRNTARFLMGNLNDFDY 675

Query: 629 GNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            N  + Y+D+  ID++A+ +LE +     E Y+ Y+F+ +FQ I  F  +++S+FY D+ 
Sbjct: 676 ANDKVDYNDMFEIDKWAMHKLEELKAKTTEFYDKYEFYSLFQEITYFCSMEMSSFYLDIV 735

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KDRLY  GTTS  RRS QTVL+  L  +VR+IAP+L   A+++W+ +P     E     E
Sbjct: 736 KDRLYCEGTTSIERRSTQTVLTEVLKVLVRIIAPVLSFTADEIWERIP-----ETLKEEE 790

Query: 748 FVFESKW 754
            V  SKW
Sbjct: 791 SVHLSKW 797


>gi|374301254|ref|YP_005052893.1| isoleucyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332554190|gb|EGJ51234.1| Isoleucyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 939

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 206/474 (43%), Positives = 283/474 (59%), Gaps = 42/474 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ LP+T+F M+AN   REPE   LW++  V   +   N+G E + LHDGPPYANG+
Sbjct: 4   YKKTLCLPETSFPMKANLKQREPETLNLWEEIDVLALMVKANEGNERYTLHDGPPYANGH 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMG A+NK+LKDII ++K +  Y+  YVPGWDCHGLPIE KV Q L E  K++L    +
Sbjct: 64  IHMGTAMNKVLKDIIVKFKNMHGYRAEYVPGWDCHGLPIEHKVAQELKEKGKENLPAVTV 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A   +K Q   FKR GV+  W+NPYLT+ P YEAA     G+    G +YRGK
Sbjct: 124 RKICRDYASKFMKIQRDEFKRLGVFGTWSNPYLTMLPTYEAATARELGRFMANGSVYRGK 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG----LA 340
           KP+HW     TALAEAE+EY + H S SIY  F     P   +    +F    G    L 
Sbjct: 184 KPIHWCICCETALAEAEVEYAD-HASPSIYVRF-----PVDDAAFSQKFSVASGKKAYLV 237

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+P+N AVAV+ + +Y +  +Q  +                          +V
Sbjct: 238 IWTTTPWTIPSNMAVAVHPEYEYVLALVQGEVH-------------------------VV 272

Query: 401 ASDLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           AS+ +  L+ K+  + V +   + G DLE  +  HP  +R  PVV+  DY+T ++GTGLV
Sbjct: 273 ASERLTALQKKFKWQDVEVLAVVTGKDLEGIKARHPFIDRVSPVVL-ADYVTLDTGTGLV 331

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG+EDY T L+YGL +LSP+DD+G+F     + +G  V+ + N  V++ L E+ +
Sbjct: 332 HTAPGHGREDYETGLRYGLEVLSPLDDKGRFLPVVNELAGKTVI-EANPEVIRILRERGA 390

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQ-VKWVP 570
           L+ EE   H YP+ WR K+P IFRAT QWF S+E    R  A+ AI + V+W+P
Sbjct: 391 LLAEEKLSHSYPHCWRCKQPVIFRATTQWFISMEKNDLRAKALRAIEKDVRWIP 444



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 118/185 (63%), Gaps = 3/185 (1%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    ++G V  V PQE    YGA+VLRLWVS+V+Y  DV I  ++L ++ D YR
Sbjct: 602 VDGEGRKMSKSLGNV--VAPQEIIDKYGAEVLRLWVSAVNYQEDVRISSEILDRLVDAYR 659

Query: 611 KLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 670
           ++R T R++LGNL D+    ++ + ++  +D+YAL       + +RE+Y+ ++F K+F  
Sbjct: 660 RIRNTCRFILGNLSDFSPDKAVPFAEMGPVDRYALDLFRLNFEKVREAYQDFEFHKVFHT 719

Query: 671 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
           +    + DLS FY DV KDRLY  G  S  RR+ QTV+   LL++++ +APIL   AE+V
Sbjct: 720 LHNLCVTDLSAFYLDVIKDRLYVSGKDSKERRAAQTVIWKTLLTLMQEMAPILCFTAEEV 779

Query: 731 WQNLP 735
           +++LP
Sbjct: 780 FRSLP 784


>gi|167630165|ref|YP_001680664.1| isoleucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592905|gb|ABZ84653.1| isoleucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 936

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/472 (43%), Positives = 285/472 (60%), Gaps = 37/472 (7%)

Query: 101 KEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPP 159
           KE   Y  T++LP+T F MRAN   REPEI K W++  ++  VA  N G+  F+LHDGPP
Sbjct: 4   KESPDYGKTLNLPRTEFPMRANLPKREPEIIKFWEEIDLYREVAKANAGKPKFILHDGPP 63

Query: 160 YANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDL 219
           YANG +H+GH LNK+LKD I ++  +  +   YVPGWD HGLPIE + +++L  + +  +
Sbjct: 64  YANGEIHLGHTLNKVLKDFIVKFHSMDGFDAPYVPGWDTHGLPIEQQAIKTLGLN-RHAV 122

Query: 220 TPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGY 279
           +  + R +  ++A   V  Q   FKR GV  DW NPY+TL PE+EAAQI VFG+M+ +GY
Sbjct: 123 STVEFRRRCQEYALKYVDVQREGFKRLGVRGDWENPYITLKPEFEAAQIGVFGEMAKKGY 182

Query: 280 IYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGL 339
           IY+G KPV+W  S  TALAEAE+EY +   S SIY  F +        GL +    D  +
Sbjct: 183 IYKGLKPVYWCASCETALAEAEVEYADKE-SPSIYVKFPV----KDLKGLFDA--KDAYV 235

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN AV V+ +  Y +V       GD                      +I
Sbjct: 236 VIWTTTPWTLPANVAVTVHPEFAYVLVR----FGGDR---------------------LI 270

Query: 400 VASDLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           VA +L+    A  G +   +++T  G DLE     HP   R   +++ G+++T E GTG 
Sbjct: 271 VAKELLAKFMADTGLEGGQVEQTFIGKDLERLVCQHPFFERDSLLIL-GEHVTLEQGTGC 329

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQM 518
           VHTAPGHG ED+     YGL ++SPVD+ GKFT E G F+G+      N AV++ L ++ 
Sbjct: 330 VHTAPGHGVEDFQVGKAYGLEVISPVDNRGKFTAEGGIFAGMTTT-QANPAVIEELKQRG 388

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            LI     +H+YP+ WR K P +FRATEQWFAS++GFR+ A++AI +V+W+P
Sbjct: 389 LLIRAGKIKHQYPHCWRCKHPILFRATEQWFASIDGFRKEALEAIDKVRWIP 440



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 116/195 (59%), Gaps = 7/195 (3%)

Query: 569 VPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 627
           V PQ+     GAD+LRLWV+SVDY  DV   P ++RQ +D YRK+R T RY LGNL+D+ 
Sbjct: 611 VEPQDVIKDMGADILRLWVASVDYRTDVAASPNIMRQTADGYRKIRNTFRYFLGNLYDFD 670

Query: 628 -VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
              ++++Y+D+  +D++A+  L  +++ +  +  +Y+F  ++  +  F  VD+S  Y D+
Sbjct: 671 PKADAVAYEDMIELDRWAMMLLHKLIQRVTAACRNYEFHLVYHAVHNFCAVDMSAIYLDI 730

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 746
            KDRLY     S  RRS QTVL     ++VR++AP +   AE+VW  LP A        A
Sbjct: 731 IKDRLYASPAKSQARRSAQTVLYHTADALVRMLAPFISFTAEEVWGYLPGA-----KERA 785

Query: 747 EFVFESKWPVLDEKW 761
           + V  + WP  D ++
Sbjct: 786 KTVQTAGWPEADSRY 800


>gi|172057960|ref|YP_001814420.1| isoleucyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|254782405|sp|B1YIS7.1|SYI_EXIS2 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|171990481|gb|ACB61403.1| isoleucyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 911

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/468 (44%), Positives = 285/468 (60%), Gaps = 40/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
            YK T+ + KT F MR N   REP++   W++  ++  V +KN G+  F+LHDGPPYANG
Sbjct: 2   EYKDTLLMMKTEFLMRGNLPKREPDMQARWNEMNLYEAVQEKNAGKPTFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGH LNK+LKDI+ RYK +  ++  YVPGWD HGLPIE   LQ    D +K ++ ++
Sbjct: 62  DIHMGHGLNKVLKDIVVRYKSMNGFRSPYVPGWDTHGLPIE-TALQKAGVD-RKSMSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   AK+A   V  Q   FKR GV  D++NPY+TL PE+EAAQI +FG M+ +GYIY+G
Sbjct: 120 FRELCAKYALEQVDHQREQFKRLGVLGDYDNPYITLQPEFEAAQIRLFGDMANKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S +IY  F+++          N   P     +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEYQDKR-SAAIYVAFQVMDGK-------NILEPTDHFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++V+ +L YA +E     EG                        IVA  
Sbjct: 232 TTPWTIPANLGISVSGELTYARIE----HEGKG---------------------YIVAET 266

Query: 404 LVP-TLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LVP  +EA       I +   G+D E  +  HP+ +R+  V++ GD++T E+ TG+VHTA
Sbjct: 267 LVPEVIEALGWEGATIGRVFDGADFEYIKAKHPLYDRESLVML-GDHVTAEA-TGVVHTA 324

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D+     YGL +L PVDD+G  T EA  F GL    D N  +   L+E  +L+ 
Sbjct: 325 PGHGEDDFRIGQAYGLDVLCPVDDKGVMTAEAPGFEGL-FYEDANKEIGVALEEAGALLK 383

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               +H YP+DWRTKKP IFRAT QWFAS++ FR   +D I +V+WVP
Sbjct: 384 LSFIKHSYPHDWRTKKPVIFRATPQWFASIKDFRAEILDEIKEVQWVP 431



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 110/167 (65%), Gaps = 1/167 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-RV 628
           P Q    +GA++LRLWV+SVDY  DV       +Q+S+ YRK+R T+R+LLGNL  +   
Sbjct: 603 PIQIMQQFGAEILRLWVASVDYQSDVRASMDNFKQVSESYRKIRNTVRFLLGNLDQFDHT 662

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + +++ DLP  D++   +L+ +V  ++ +Y++Y F  ++Q++  F ++DLS+FY D  K
Sbjct: 663 THRVAFKDLPESDRFMRTKLDQLVGKVKAAYDAYDFMAVYQLLHNFCVLDLSSFYLDYTK 722

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           D LY     +  RR+ QTV+   ++++++++AP+LPH A++ W+ +P
Sbjct: 723 DILYIEKEDAPARRAVQTVMYDTVVTLLQLMAPVLPHTADEAWEFVP 769


>gi|375088334|ref|ZP_09734674.1| isoleucine-tRNA ligase [Dolosigranulum pigrum ATCC 51524]
 gi|374562372|gb|EHR33702.1| isoleucine-tRNA ligase [Dolosigranulum pigrum ATCC 51524]
          Length = 926

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/469 (42%), Positives = 285/469 (60%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANG 163
           + K T++L KT F MRAN   +EP++ K WDD Q++ ++ ++N D   F+LHDGPPYANG
Sbjct: 2   KIKDTLNLLKTDFSMRANLSEKEPKMQKNWDDKQLYEKMLERNQDNTPFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHALNKI KDII RYK +  +   Y+PGWD HGLPIE  + +S  +  +K ++ ++
Sbjct: 62  NIHIGHALNKISKDIIVRYKNMAGFYTPYIPGWDTHGLPIETALTKSGVD--RKSMSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   ++ Q   FKR GV  +W+NPY+TL P+YEAAQI VFG+M+ +GYIYRG
Sbjct: 120 FRKLCEEYAWKQIEQQRKDFKRLGVQGEWDNPYVTLTPDYEAAQIRVFGEMAKKGYIYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS +ALAEAE+EY +     SIY  F +         +L +   D    +WT
Sbjct: 180 LKPIYWSPSSESALAEAEIEYQDVR-GPSIYVAFDVKDG----GDVLED---DTQFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P+N A+ V     Y+V E                         Q+ V   +A  
Sbjct: 232 TTPWTIPSNVAITVRGDGDYSVYEADG----------------------QRYV---LADR 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L   +  K G   + + K+  G++LE     HP  +R   +++G D++T ++GTGLVHTA
Sbjct: 267 LAEEVAEKIGWQDIKLVKSFKGAELEGLVAHHPYLDRDSHLILG-DHVTFDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG +D+V   KY LP++SP+D +G FT+E  +F G+    D N+     L EQ  L+ 
Sbjct: 326 PGHGDDDFVVGQKYNLPVISPIDAQGYFTDEIPEFEGM-FYDDANIKSTDLLKEQNKLLH 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            E + H YP+DWRTKKP IFRAT QWFAS++ FR   + A+ +  W+ P
Sbjct: 385 LEFFTHSYPHDWRTKKPVIFRATPQWFASIDKFRDDILKAVEETDWIQP 433



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 106/166 (63%), Gaps = 1/166 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P   A   GAD++RLW +SVD + DV +  ++L Q++++YRK+R T+R+L+ N  D+   
Sbjct: 604 PNDVADDLGADLIRLWAASVDTSADVRVSEEILGQVAEVYRKIRNTIRFLIQNTEDFNYA 663

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + I+YD+L   DQY L QL   VK+   +Y++Y F +I++ I +F  V +SNFY +V+K
Sbjct: 664 TDGIAYDNLRGFDQYILSQLNTTVKDALAAYDNYNFSEIYKEINQFCTVVMSNFYMNVSK 723

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           D LY      + RR+ QTV    +L + +++ PI+PH AE++W  L
Sbjct: 724 DVLYIDAPNGYERRAMQTVFYEVVLKLAKLLTPIIPHTAEEIWSYL 769


>gi|340755474|ref|ZP_08692158.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|421499743|ref|ZP_15946777.1| isoleucine--tRNA ligase [Fusobacterium necrophorum subsp.
           funduliforme Fnf 1007]
 gi|313687301|gb|EFS24136.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|402269374|gb|EJU18708.1| isoleucine--tRNA ligase [Fusobacterium necrophorum subsp.
           funduliforme Fnf 1007]
          Length = 931

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/474 (43%), Positives = 292/474 (61%), Gaps = 42/474 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYAN 162
           E  Y  T+ LPKT+F M+ N   +EP   K W++H+++ +   K   E+F+LHDGPPYAN
Sbjct: 3   EKDYAETLHLPKTSFQMKGNLPNKEPNYIKKWEEHKIYEKGLSKGK-ESFILHDGPPYAN 61

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           GN H+GHALNKILKDII +YK LQ YK  Y+PGWD HGLPIELKV++ L   A KD+T  
Sbjct: 62  GNTHIGHALNKILKDIIIKYKTLQGYKAPYIPGWDTHGLPIELKVMEKLGSKA-KDMTAL 120

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           ++R    ++A   V  Q   F R GV   W +PYLTL P++EA Q+++FG++   GYI++
Sbjct: 121 EIRKLCKEYALRWVDIQREEFIRMGVIGKWEDPYLTLKPQFEAKQLQIFGELYANGYIFK 180

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLA 340
           G KP++WSP + TALAEAE+EY + H S SIY   +      + + LL +  F  +  + 
Sbjct: 181 GLKPIYWSPVTETALAEAEIEYHD-HTSPSIYVKMK------ANADLLEKISFPEEAYVV 233

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN A+++N + +Y V                 K+  GN         +I+
Sbjct: 234 IWTTTPWTLPANVAISLNPEFEYGVY----------------KTEKGN---------LIL 268

Query: 401 ASDLVPTLEAKWGTKL-VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
             +L  T  A+ G +   + K   GS LE   Y HP  +R   +++ G ++T ++GTG V
Sbjct: 269 GKELAETAFAEMGIEAPELLKEFKGSVLEMTSYQHPFLDRTGYIIL-GTHVTADAGTGCV 327

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQM 518
           HTAPGHGQEDYV   +Y +PI+SP++ +G  TEEAG  F+GL      N A++++L E  
Sbjct: 328 HTAPGHGQEDYVVGCRYNMPIVSPINYKGYLTEEAGPLFAGL-FYEKANKAIIEHLTEIG 386

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
            L+  +   H YP+DWR+K P IFRATEQWF   EG   R+ A+ A+ +V+++P
Sbjct: 387 LLLKMKEITHSYPHDWRSKTPVIFRATEQWFVKAEGSDLREKALKALDEVEFIP 440



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/210 (42%), Positives = 133/210 (63%), Gaps = 8/210 (3%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    YGAD+LRLW +SVDY  DV I   +++QM++ YR++R T RY+LGN + +   
Sbjct: 614 PEKIIKQYGADILRLWCASVDYREDVKISDNIVKQMAETYRRVRNTARYILGNSYGFDPK 673

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            +++ Y DL  ID++AL +LE + K++ ESYE Y+F+ +FQ I  F  +D+S FY D+ K
Sbjct: 674 KDAVPYQDLLEIDKWALHKLEMLKKSVGESYEKYEFYNVFQEIHYFAGIDMSAFYLDIIK 733

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 748
           DRLYT    S  RRS QTV+   L+++V++IAPIL   AE++W++LP   TL D    E 
Sbjct: 734 DRLYTEKEDSLARRSAQTVMIEILMTLVKMIAPILSFTAEEIWEHLP--ETLRD---QES 788

Query: 749 VFESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           V  + W V+ E+     V E   W KI ++
Sbjct: 789 VLLTDWYVMKEEHINEKVEEK--WAKIQKI 816


>gi|269123856|ref|YP_003306433.1| isoleucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268315182|gb|ACZ01556.1| isoleucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 928

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 198/466 (42%), Positives = 283/466 (60%), Gaps = 36/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           Y  T++LPKT+F M+AN   +EP   + W+ ++++ +  D N+   F LHDGPPYANGNL
Sbjct: 9   YASTLNLPKTSFKMKANLSQKEPLTIRDWEKNKIYEKSLD-NEKPTFFLHDGPPYANGNL 67

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHA+NK+LKDII +YK LQ +   Y+PGWD HGLPIE K++Q L E A K+++P +LR
Sbjct: 68  HIGHAINKVLKDIILKYKRLQGFNAPYIPGWDTHGLPIEWKMIQDLGEKA-KEMSPLELR 126

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
               K+A  +V+ Q   F R G+  DWNNPY+TL+ E+EA ++ VF  +   GY+Y+G K
Sbjct: 127 NACKKYALKSVEMQKKDFIRLGILGDWNNPYITLNKEFEAEELRVFRDIYENGYVYKGLK 186

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PV+WSP++ TALAEAE+EY +   S SIY    +        G+ N       + +WTTT
Sbjct: 187 PVYWSPTTETALAEAEIEYKDVE-SDSIYVKMNLTDETNEKLGVEN-----AAVIIWTTT 240

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN A+++N    Y V                 K+  GN         +I++  L 
Sbjct: 241 PWTIPANLAISLNENFVYGVY----------------KTEKGN---------LILSKSLA 275

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGH 465
                +      + K + G D E   Y HP+ +R   ++I GD++T ++GTG VHTAPGH
Sbjct: 276 EKAFNEMNLSFELIKEIQGKDFERLTYKHPIYDR-VSMLILGDHVTEDAGTGCVHTAPGH 334

Query: 466 GQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEP 525
           G +DY  SLKYG+ ILSPVDD+G  T EA ++ GL      N A++  L+    L+  + 
Sbjct: 335 GVDDYNVSLKYGIGILSPVDDKGHMTSEAPRYEGL-FYKKANSAIMADLENSGHLLGHKK 393

Query: 526 YEHKYPYDWRTKKPTIFRATEQWFASVEG-FRQAAMDAIGQVKWVP 570
             H YP+DWR+KKP IFRATEQWF  V+G  R+  ++ + +V++VP
Sbjct: 394 LVHSYPHDWRSKKPVIFRATEQWFIKVDGEVRENTLEKLEEVEFVP 439



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 81/193 (41%), Positives = 122/193 (63%), Gaps = 10/193 (5%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 636
           +GAD+LRLWVSSVDY  DV I   +++QM+D YRK+R T RYLLGN++D+   N ++YDD
Sbjct: 620 HGADILRLWVSSVDYREDVRISDNIIQQMTDSYRKIRNTARYLLGNINDFDRSNKVAYDD 679

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  ID++A+ +LE + + + + YE+Y+F+ +FQ I  F  V++S+FY D+ KDRLY    
Sbjct: 680 MLEIDKWAMHKLEELKEKVTKHYENYEFYSLFQEILYFCSVEMSSFYLDIIKDRLYCEYK 739

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV------- 749
            S  RRS Q+VL   L  +VR+I+P+L   AE++W+ L +    E    A ++       
Sbjct: 740 DSLERRSAQSVLVDILDVLVRIISPVLSFTAEEIWERLDYEGKEESVHLASWIKAKPEHM 799

Query: 750 ---FESKWPVLDE 759
                 KW +L E
Sbjct: 800 NEELAKKWQILGE 812


>gi|347750591|ref|YP_004858156.1| isoleucyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|347583109|gb|AEO99375.1| isoleucyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 922

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 212/521 (40%), Positives = 304/521 (58%), Gaps = 51/521 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N   +EP+I   W++  ++ +V  + +G   FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGNLPKKEPQIQAKWEEMDIYQKVMKRTEGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNK LKDIINR+K +  Y   YVPGWD HGLPIE ++ +   +  +K ++ ++ 
Sbjct: 63  LHMGHALNKTLKDIINRFKSMTGYHAPYVPGWDTHGLPIEQELTKKGVD--RKSMSVAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    K+A   +  Q  +FKR GV  DW NPYLTL P YEA QI+VFG+M+ +GYIY+G 
Sbjct: 121 RKLCEKYAHEQIDRQRTAFKRLGVRGDWENPYLTLRPAYEAEQIKVFGEMAKKGYIYKGL 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALA+AE+EY +   S SIY  F +        G+L+    D  + +WTT
Sbjct: 181 KPVYWSPSSESALADAEIEYKDIK-SPSIYVAFDVKDG----KGVLD---TDTKIVIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N  +AVN ++ Y VV+             NK      +L++   V        
Sbjct: 233 TPWTIPSNLGIAVNPEINYVVVK----------TGGNKYLVAEALLEEVSSVL------- 275

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
                 +W    V+ +T+ G  LE     HP+  R   V++ GD++TT+SGTG VHT+PG
Sbjct: 276 ------EWENAEVV-QTVPGKKLEYIVAKHPLYGRDSLVML-GDHVTTDSGTGCVHTSPG 327

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++D++   KYGL ++  VDD+G  T++A  F GL      N  + + LD+  +L+  +
Sbjct: 328 HGEDDFLIGKKYGLDVICAVDDKGMMTKDAPGFEGL-FYDKANKPICEALDQAGALLKLK 386

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP----------QEA 574
              H YP+DWRTKKP IFRAT QWFASV+ FR   + A+ +V W P           ++ 
Sbjct: 387 FLTHSYPHDWRTKKPVIFRATSQWFASVDMFRDDILKAVEEVNWTPVWGELRMHNMIRDR 446

Query: 575 PGYGADVLRLWVSSVDY----TGDVMIGPQVLRQMSDIYRK 611
             +     R W   +       G+ +I  + +R +SD++RK
Sbjct: 447 GDWCISRQRAWGVPIPVFYAENGEAIITEETIRHVSDLFRK 487



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 78/199 (39%), Positives = 128/199 (64%), Gaps = 3/199 (1%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           +P +     GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T R++LGNL+D+  
Sbjct: 603 LPGKVVEQLGADIIRLWVASVDYQADVRVSNEILKQVSEVYRKIRNTFRFMLGNLNDFDP 662

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + ++Y++L  +D++ L +L  +VK +RE+YE Y+F  I+  +  F   DLS+FY D A
Sbjct: 663 ARHQVAYEELREVDRFMLVKLNKLVKEVREAYERYEFATIYHAVNNFCATDLSSFYMDFA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAY--TLEDGSA 745
           KD LY     +  RR+ QTVL   L+++ ++++PILPH A++VWQ +P     +++    
Sbjct: 723 KDVLYIELADNPERRAMQTVLYECLVALTKLLSPILPHTADEVWQYIPGVAEESVQLTDM 782

Query: 746 AEFVFESKWPVLDEKWRTF 764
            E+V       L+EKW  F
Sbjct: 783 PEYVDLPDASALEEKWNAF 801


>gi|239616422|ref|YP_002939744.1| isoleucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|259511506|sp|C5CHA1.1|SYI_KOSOT RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|239505253|gb|ACR78740.1| isoleucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 921

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 208/468 (44%), Positives = 279/468 (59%), Gaps = 43/468 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T++LPKT+F MRAN + +EPE  K W++  ++  V    +G   FVLHDGPPYANGN
Sbjct: 3   YKDTLNLPKTSFSMRANLVRKEPEQLKKWEEMDLYKYVQKNREGAPLFVLHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G ALNKILKD I +YK +Q Y   Y+PGWD HGLPIE +V   L E A K+L+ S +
Sbjct: 63  IHVGTALNKILKDFIIKYKTMQGYNAPYIPGWDTHGLPIEHRVASELGEKA-KELSKSTI 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  K+A+  VK Q   FKR GV  DW NPYLT DP+YEA+ ++V  ++   G +YR  
Sbjct: 122 RKKCRKYAEKYVKIQREQFKRLGVRGDWENPYLTFDPKYEASVLKVLSKLVKSGNVYRTL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KP++W  S  TALAEAE+EY + H S SIY  F+  + P       N F       +WTT
Sbjct: 182 KPIYWCTSCETALAEAEVEYHD-HKSYSIYVKFQDKNKP-------NRF-----FVIWTT 228

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+A+N    Y  V+++                         +++I+    L
Sbjct: 229 TPWTLPANVAIALNPNFDYCEVKVKD------------------------EIWILAEGLL 264

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
              ++A       I  T  GS+ E     HP  NR   V++  DY+  ++GTG VHTAPG
Sbjct: 265 EQAMKAMGIESYEIISTKKGSEFEGEVAQHPFMNRDS-VIVMADYVALDAGTGCVHTAPG 323

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG+EDY T L+Y LP++SPV+D+G FT+EAGK++GL V  D N  +V+ L +   L+ E 
Sbjct: 324 HGEEDYGTGLRYRLPVISPVNDQGIFTKEAGKYAGLFVF-DANPIIVEDLRKSGHLVGEG 382

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             EH YP+ WR K P IFRATEQWF  V+    RQ A+  I + +W P
Sbjct: 383 KIEHSYPHCWRCKNPVIFRATEQWFIDVDKNDLRQKALSEIEKTEWHP 430



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 82/201 (40%), Positives = 131/201 (65%), Gaps = 5/201 (2%)

Query: 569 VPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 627
           V PQE    YGA++LRLWV+S +Y  D+ I   +++Q  + Y+K+R TLRYLLGNL D+ 
Sbjct: 601 VDPQEINNKYGAEILRLWVASSNYQEDIRISMNIIQQQIENYKKIRNTLRYLLGNLSDYS 660

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +S+ Y++L  +D++A+ +L  +++++   Y+ Y+F+K+FQ I +FII D+S FY D+ 
Sbjct: 661 PQDSVPYEELLELDKWAIMKLHKLIRDVTRYYDRYEFYKVFQSILKFIITDMSAFYLDII 720

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA----YTLEDG 743
           KDRLY  G TS  RRS QTVL   L+++ +++APIL   +E+V+ +LP A     T++  
Sbjct: 721 KDRLYVEGKTSPERRSAQTVLFEILVALNKMLAPILTFTSEEVYAHLPEAARNYKTIQVE 780

Query: 744 SAAEFVFESKWPVLDEKWRTF 764
           +  E+  E     L+E+W   
Sbjct: 781 NWPEYKEEYIDSSLEERWEKL 801


>gi|348577007|ref|XP_003474276.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Cavia
           porcellus]
          Length = 982

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 215/490 (43%), Positives = 288/490 (58%), Gaps = 34/490 (6%)

Query: 86  RGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREP----EIHKLWDDHQVFL 141
           RG   A   AA  ++   GRY+ TV LP+T F MR     R+P    EI +     +++ 
Sbjct: 43  RGVSGAGDPAASPDR---GRYRDTVLLPRTAFPMRLPGR-RQPDTELEIQQKCGFSELYS 98

Query: 142 RVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGL 201
              ++     F LHDGPPYANG+ H+GHALNKILKDI NR+ +++  K+ +VPGWDCHGL
Sbjct: 99  WQRERKAKTEFCLHDGPPYANGDPHIGHALNKILKDIANRFHMMRGSKIHFVPGWDCHGL 158

Query: 202 PIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDP 261
           PIE KVL  L   A+ +L+P ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D 
Sbjct: 159 PIESKVLSELGGKAQ-NLSPMEIREKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDG 217

Query: 262 EYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVS 321
           EYEA Q+ +F +M  +G +YR  KPV WSPSSRTALAEAELEY   H SRS+Y  F + +
Sbjct: 218 EYEARQLRIFYKMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHTSRSVYVKFPLRT 277

Query: 322 APPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPAN 381
            PP  + LL+   P   + VWTT PWTVPAN A+  + + +YAVV               
Sbjct: 278 PPPKLASLLDGS-PAASVLVWTTQPWTVPANQALCYSPQSKYAVV--------------- 321

Query: 382 KKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQC 441
           K S  GN          IVA+D V  L +   T L +  T +G DLE+    HP+   + 
Sbjct: 322 KCSTSGN--------RYIVAADKVAPLGSTLDTTLEVIATFSGVDLEDGTCSHPLIPDKV 373

Query: 442 PVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGL 500
             ++   ++T   GTGLVHTAP HG EDY  + ++ LP+   VD+ G FT  AG +  G 
Sbjct: 374 SPLLPATHVTMAKGTGLVHTAPAHGMEDYGVASQHSLPVDCSVDEGGTFTAAAGPELEGK 433

Query: 501 DVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAM 560
            VL +G   V+K L    SL+ EE   H YPYDWRTKKP I RA++QWF  +   +  A 
Sbjct: 434 AVLEEGTDMVIKMLQHAKSLLKEEKLIHSYPYDWRTKKPIIIRASKQWFVKISDIKPTAK 493

Query: 561 DAIGQVKWVP 570
           + +  VK++P
Sbjct: 494 EVLKTVKFIP 503



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 87/189 (46%), Gaps = 37/189 (19%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P +GAD+LR WV+  +   +V +GP  L    +   KLR TLR+LLGNL  +    +S+ 
Sbjct: 689 PPFGADILRWWVAESNVFTEVTLGPSALSAAREDISKLRNTLRFLLGNLAGFNPQTDSVP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            D + ++DQY L  L+++   +R                                  LY 
Sbjct: 749 VDGMYVLDQYMLHLLQSLATKVR------------------------------MPRSLYC 778

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L+  L  + R  AP+LPHLAE+V+Q+LP+      G+    VF + 
Sbjct: 779 EREDDPKRRSCQTALAQILDVLTRAFAPVLPHLAEEVFQHLPY------GAEPRSVFRTG 832

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 833 WISASTIWK 841


>gi|407477641|ref|YP_006791518.1| Isoleucine--tRNA ligase [Exiguobacterium antarcticum B7]
 gi|407061720|gb|AFS70910.1| Isoleucine--tRNA ligase [Exiguobacterium antarcticum B7]
          Length = 911

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 210/469 (44%), Positives = 288/469 (61%), Gaps = 42/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
            YK T+ + KT F MR N   REP++   W++  ++  V +KN G+  F+LHDGPPYANG
Sbjct: 2   EYKDTLLMMKTEFLMRGNLPKREPDMQARWNEMNLYEAVQEKNVGKPTFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGH LNK+LKDI+ RYK +  ++  YVPGWD HGLPIE   LQ    D +K ++ ++
Sbjct: 62  DIHMGHGLNKVLKDIVVRYKSMNGFRSPYVPGWDTHGLPIE-TALQKAGVD-RKSMSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   AK+A   V  Q   FKR GV  D++NPY+TL PE+EAAQI +FG M+ +GYIY+G
Sbjct: 120 FRKLCAKYALEQVDHQREQFKRLGVLGDYDNPYITLQPEFEAAQIRLFGDMANKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S +IY  F+++          N   P     +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEYQDKR-SAAIYVAFQVMDGK-------NILEPTDHFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++V+ +L YA +E Q   +G                        IVA  
Sbjct: 232 TTPWTIPANLGISVSGELTYARIEYQG--KG-----------------------YIVAET 266

Query: 404 LVP-TLEA-KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           LVP  +EA  WG +  I +   G+D E  +  HP+ +R+  V++ GD++T E+ TG+VHT
Sbjct: 267 LVPEVIEALGWG-EATIGRVFNGADFEYIKAKHPLYDRESLVML-GDHVTAEA-TGVVHT 323

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++D+     YGL +L PVDD+G  T EA  F G+    D N  +   L+E  +L+
Sbjct: 324 APGHGEDDFRIGQAYGLDVLCPVDDKGVMTAEAPGFEGM-FYEDANKEIGIALEEAGALL 382

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                +H YP+DWRTKKP IFRAT QWFAS++ FR   +D I  V+WVP
Sbjct: 383 KLSFIKHSYPHDWRTKKPVIFRATPQWFASIKDFRAEILDEIKGVQWVP 431



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 110/167 (65%), Gaps = 1/167 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-RV 628
           P Q    +GA++LRLWV+SVDY  DV       +Q+S+ YRK+R T+R+LLGNL  +   
Sbjct: 603 PIQIMQQFGAEILRLWVASVDYQSDVRASMDNFKQVSESYRKIRNTVRFLLGNLDQFDHT 662

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + +++ DLP  D++   +L+ +V  ++ +Y++Y F  ++Q++  F ++DLS+FY D  K
Sbjct: 663 THRVAFADLPESDRFMRTKLDQLVGKVKAAYDAYDFMAVYQLLHNFCVLDLSSFYLDYTK 722

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           D LY     +  RR+ QTV+   ++++++++AP+LPH A++ W+ +P
Sbjct: 723 DILYIEKEDAPARRAVQTVMYDTVVTLLQLMAPVLPHTADEAWEFVP 769


>gi|229918560|ref|YP_002887206.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229469989|gb|ACQ71761.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 908

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 210/467 (44%), Positives = 284/467 (60%), Gaps = 40/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +P T F MR N   REP +   W+D  ++ +V +KN G+  ++LHDGPPYANG+
Sbjct: 3   YKDTLLMPNTEFAMRGNLPKREPAMQTEWEDMDLYNKVQEKNAGKPQYILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHA+NK+LKDII R+K +  Y+   +PGWD HGLPIE   LQ    + +K++T ++ 
Sbjct: 63  IHMGHAMNKVLKDIIVRFKGMNGYQSPMIPGWDTHGLPIE-NALQKAGVN-RKEMTVAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K A++A   V +Q   FKR G+ AD+ NPY+TL PEYEAAQI +FG M+ +GYIY+GK
Sbjct: 121 REKCAEYAMEQVNSQREQFKRLGLLADFENPYITLLPEYEAAQIRLFGSMAEKGYIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S +IY  FR+V    + +        D    +WTT
Sbjct: 181 KPVYWSPSSESALAEAEIEYYDKK-SPAIYVAFRVVDGKDTLTS-------DDHFVIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  +AV+ +L Y  +E     EG                        IVA  L
Sbjct: 233 TPWTIPANLGIAVSDELTYTRIE----HEGKG---------------------YIVAETL 267

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  + A  G T   +  +  G D E     HP+ +R   +VI GD++T ++ TGLVHTAP
Sbjct: 268 VEEVTAALGWTDYTVSGSWNGRDFEYMTAQHPLYDRTS-LVILGDHVTADA-TGLVHTAP 325

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++DY     YGL +L PVDD G  T+EA  F GL    D N  +   L+E   L+  
Sbjct: 326 GHGEDDYRVGQAYGLDVLCPVDDRGYMTDEAPGFEGL-FYEDANKQIGMKLEENGYLLNL 384

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +  +H YP+DWRTKKP IFRAT QWFAS++ FR+  +  I +V WVP
Sbjct: 385 KFIKHSYPHDWRTKKPVIFRATPQWFASIKDFREDMLREIEEVNWVP 431



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 103/159 (64%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 636
           YGA+++RLWV+SVDY  DV       +Q+S++YRK+R T+R+LLGNL+ +     +++DD
Sbjct: 610 YGAEIVRLWVASVDYQSDVRASHDNFKQVSEVYRKMRNTIRFLLGNLNGFEPSMRVAFDD 669

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +P  D++   +L+ +   + ++Y+ + F  ++ ++  F + +LS+FY D  KD LY    
Sbjct: 670 MPEADRFMATKLKQLQTKVVKAYDEFDFMAVYHLVHNFCVNELSSFYLDFTKDILYIERE 729

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
               RR+ QTV+   ++ + +++APILPH A++ W+ +P
Sbjct: 730 DDLRRRAVQTVMYDAVVLLTKLLAPILPHTADEAWKEVP 768


>gi|239636330|ref|ZP_04677332.1| isoleucine--tRNA ligase [Staphylococcus warneri L37603]
 gi|239597685|gb|EEQ80180.1| isoleucine--tRNA ligase [Staphylococcus warneri L37603]
          Length = 916

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/461 (44%), Positives = 282/461 (61%), Gaps = 39/461 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G  +++LHDGPPYANG+
Sbjct: 3   YKDTLLMPKTEFPMRGGLPNKEPKIQEQWDADNQYQKALEKNKGNASYILHDGPPYANGS 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKI+KD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   FKR GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIEIQKKDFKRLGVRGDFNDPYITLKPEYEAAQIRLFGEMAEKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G++++   D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVDK---DAQFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                          K +II  +  
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG------------------------KKYIIAQALA 268

Query: 405 VPTLEA-KWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
               EA +W    + ++K   G +LE     HP  +R   +VI G+++TT++GTG VHTA
Sbjct: 269 ETVAEALEWDQDTIQLEKEFTGKELEYVEAQHPFLDR-TSLVINGEHVTTDAGTGCVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY LP++SP++D+G FTEE G F G+      N AV   L E+ +L+ 
Sbjct: 328 PGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLTEKDALLK 386

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
                H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 387 LNFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDILDAI 427



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/235 (39%), Positives = 134/235 (57%), Gaps = 12/235 (5%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 653
           V I  ++L+Q SD+YRK+R TLR++LGN+ D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNVSDFNPETDSIAEAELLEVDRYLLHRLREFTA 690

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY    +S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEERSSHKRRSMQTVLYQILV 750

Query: 714 SIVRVIAPILPHLAEDVWQNLPF----AYTLEDGSAAEFVFESKWPVLDEKWRTF 764
            + +++APIL H AE+VW + P     +  L D    E V +     L +KW TF
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHVKEESVHLADMPKVEEVDQQ----LLDKWNTF 801


>gi|326202019|ref|ZP_08191889.1| isoleucyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325987814|gb|EGD48640.1| isoleucyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 929

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/469 (43%), Positives = 286/469 (60%), Gaps = 37/469 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  +++LP+T F MRAN   REPE  K W+D  ++ +   K +G+ +F+LHDGPPYANG 
Sbjct: 5   YGKSLNLPQTDFPMRANLPQREPEFLKKWEDMDIYNKQLKKAEGKPSFILHDGPPYANGG 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G +LNKILKDI+ +YK +  Y   YVPGWD HGLPIE + ++ L    + ++ P   
Sbjct: 65  IHLGTSLNKILKDIVVKYKSMSGYYTPYVPGWDTHGLPIEQRAIKELGL-KRHEVGPVVF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     FA   +  Q  SFKR GV ADW +PY+TL PE+EA QIEVFG+M+ +G+IY+G 
Sbjct: 124 REACEGFAMKYLDIQRESFKRLGVRADWEHPYVTLKPEFEAKQIEVFGEMAKKGHIYKGL 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP--DLGLAVW 342
           KPV+W P   TALAEAE+EY +   + SIY  F++        G+     P   +   +W
Sbjct: 184 KPVYWCPECETALAEAEIEYADD-TTVSIYVKFQV----RDDKGIFEGVAPKEKINFVIW 238

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTT WT+PAN A+ +N   +Y+VV+            AN +             + ++A+
Sbjct: 239 TTTTWTLPANLAICLNESFEYSVVK------------ANDE-------------YYVLAA 273

Query: 403 DLVP-TLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV  T++A   T+        GS+LE     HP  +R   +VI GD++T E+GTG VHT
Sbjct: 274 ELVENTMKAAAITEYETVAKFKGSELEGILCKHPFLDRD-SLVILGDHVTLEAGTGCVHT 332

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG ED++   KY +P+L PVD +G  T+EAG F+G+      N A+++ L +   L+
Sbjct: 333 APGHGAEDFLVCQKYKIPVLVPVDSKGFLTKEAGPFAGM-FYKKSNPAIIEKLTQDGRLL 391

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             E   H+YP+ WR K P IFRATEQWFAS++ FR AA++AI  VKWVP
Sbjct: 392 ASESITHQYPHCWRCKDPIIFRATEQWFASIDSFRDAALEAIKTVKWVP 440



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 131/203 (64%), Gaps = 7/203 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLWV+S DYT D+ I   +L+Q+S++YRK+R T RY+LGN++ +    +S+ Y 
Sbjct: 619 YGADILRLWVASSDYTTDIKISKDLLKQLSEVYRKIRNTARYILGNINGFNPDTDSVDYS 678

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  +D++AL+++ N++K + E+Y  Y+F  +F  I  F +VD+SNFY D+ KDRLYT  
Sbjct: 679 ELSELDRWALYKMTNLIKKVNEAYSGYEFHMMFHAIHNFCVVDMSNFYLDIIKDRLYTSK 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             S  RR+ QTV+   L S+VR++ P+L    E++WQ +P  +  ED    E +  + WP
Sbjct: 739 PDSKERRAAQTVMYEILQSLVRMLTPVLAFTTEEIWQYMP--HRAEDD--IESIQLNSWP 794

Query: 756 VLDEKWRTFPVGEIYFWGKILEV 778
            ++E +    + E   W KI E+
Sbjct: 795 QVNEMYLDTQLAEK--WEKIFEL 815


>gi|315639610|ref|ZP_07894750.1| isoleucine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315484571|gb|EFU75027.1| isoleucine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 930

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/470 (44%), Positives = 292/470 (62%), Gaps = 41/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE +  K W++  ++    +KN+G+  FVLHDGPPYANG
Sbjct: 2   KMKETLHLGKTAFPMRGNLPNREVDWQKEWEEKDLYRLRQEKNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K+++ ++
Sbjct: 62  NIHLGHSLNKISKDIIVRSKSMSGFRAPYVPGWDTHGLPIE-QVLTN-KGIKRKEMSLAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K   +A   V  Q   FKR GV  DWN+PY+TL P+YEAA+I VFG+M+ +GYIY+G
Sbjct: 120 YRQKCYDYALTQVDKQRNDFKRLGVSGDWNHPYVTLTPDYEAAEIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +V       G+L+    D  L +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFDVVDG----KGILD---TDTALVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN K  Y  +E                        D +K   +VA D
Sbjct: 232 TTPWTIPANLGISVNPKYTYVQIE-----------------------ADGRK--FVVAKD 266

Query: 404 LVP--TLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+   T E  W +  V+K+ +AG D++     HP+ +R   V++ GD++T ++GTGLVHT
Sbjct: 267 LLEAVTNEIGWESVTVLKE-VAGKDMDLMTAKHPLYDRTSLVMV-GDHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++D++   KY L ILSP+D  G +T+EA  F GL      N  V + L E  +L+
Sbjct: 325 APGHGEDDFIIGKKYHLDILSPIDSRGCYTDEAPGFEGL-FYEKANPIVTEKLKETGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
             + + H YP+DWRTKKP IFRAT QWFAS++ FRQ  +D + +V W+ P
Sbjct: 384 KLDFFTHSYPHDWRTKKPVIFRATPQWFASIDKFRQDILDEVDKVNWIIP 433



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 71/159 (44%), Positives = 106/159 (66%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVDY  DV +   +L Q+S++YRK+R T+R+LL N  D+    +S++Y+D
Sbjct: 612 GADILRLWVSSVDYESDVRVSMDILSQVSEVYRKIRNTMRFLLANTEDFNPETDSVAYED 671

Query: 637 LPMIDQYALFQLENIVKNIRE-SYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +VK IRE  YESY F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 672 LRSVDKYMTVRLNKVVKEIREKGYESYNFLHIYRTVINFLTVDLSSFYLDFAKDVVYIEA 731

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
             +  RR  QTV     +++ +++ PI+PH AE++W +L
Sbjct: 732 KENHDRRCMQTVFYQTAVTLTKLLTPIIPHTAEEIWSHL 770


>gi|307290035|ref|ZP_07569959.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0411]
 gi|306498877|gb|EFM68371.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0411]
          Length = 933

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 293/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 9   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 69  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 127 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 187 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 239 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 273

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 274 LLATVKEAVGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 333 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 392 LDFFTHSYPHDWRTKKPVIYRATTQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 777


>gi|220929274|ref|YP_002506183.1| isoleucyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999602|gb|ACL76203.1| isoleucyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 929

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 202/469 (43%), Positives = 284/469 (60%), Gaps = 37/469 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  +++LPKT F MRAN   REPE  K W+D  ++     K++G+ +F+LHDGPPYANG 
Sbjct: 5   YGKSLNLPKTDFPMRANLPQREPEFLKKWEDMDIYNTQLKKSEGKPSFILHDGPPYANGG 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G  LNK+LKDI+ +YK +  Y   YVPGWD HGLPIE + ++ L    + ++ P   
Sbjct: 65  IHLGTTLNKVLKDIVVKYKSMSGYYTPYVPGWDTHGLPIEQRAIKELGL-KRHEVGPVVF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     FA   +  Q  SFKR GV ADW +PY+TL PE+EA QIEVFG+M+ +G+IY+G 
Sbjct: 124 REACEGFALKYLDVQRESFKRLGVRADWEHPYITLKPEFEAKQIEVFGEMATKGHIYKGL 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP--DLGLAVW 342
           KPV+W P   TALAEAE+EY +   + SIY  F++        G+     P   +   +W
Sbjct: 184 KPVYWCPECETALAEAEIEYADD-TTVSIYVKFQV----RDDKGIFEGVAPKEKVNFVIW 238

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTT WT+PAN A+ +N   +Y+VV+            AN +             + ++A+
Sbjct: 239 TTTTWTLPANLAICLNESFEYSVVK------------ANDE-------------YYVLAA 273

Query: 403 DLVP-TLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV  T++A   T+        GS LE     HP  ++   +VI GD++T E+GTG VHT
Sbjct: 274 ELVENTMKAAAVTEYETVAKFKGSQLEGILCKHPFLDKD-SIVILGDHVTLEAGTGCVHT 332

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG ED++   KY +P+L PVD +G  T+EAG F+G+      N A+++ L +   L+
Sbjct: 333 APGHGAEDFIVCQKYKIPVLVPVDSKGFLTKEAGPFAGM-FYKKSNSAIIEKLTQDGRLL 391

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             E   H+YP+ WR K P IFRATEQWFAS++GFRQ ++ AI  VKW+P
Sbjct: 392 ASEKITHQYPHCWRCKDPIIFRATEQWFASIDGFRQESLKAIKDVKWIP 440



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 85/203 (41%), Positives = 136/203 (66%), Gaps = 7/203 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLWV+S DYT D+ I   +L+Q+S++YRK+R T RY+LGN++D+    +S+ Y+
Sbjct: 619 YGADILRLWVASSDYTTDIRISKDLLKQLSEVYRKIRNTARYILGNINDFNPDTDSVDYN 678

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           DL  +D++AL ++ N++K + E+Y++Y+F  +F  I  F +VD+SNFY D+ KDRLYT  
Sbjct: 679 DLNELDKWALGRMTNLIKKVNEAYDTYEFHLMFHAIHNFCVVDMSNFYLDIIKDRLYTSK 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             +  RR+ QTV+   L ++VR++ P+L    E++WQ +P  +  ED +  E V  + WP
Sbjct: 739 PDTKERRAAQTVMYEILHNLVRMLTPVLAFTTEEIWQYMP--HRAEDDT--ESVQLNSWP 794

Query: 756 VLDEKWRTFPVGEIYFWGKILEV 778
            ++EK+    + E   W KI E+
Sbjct: 795 QVNEKYVNTALSEK--WEKIFEL 815


>gi|445059887|ref|YP_007385291.1| isoleucyl-tRNA ligase [Staphylococcus warneri SG1]
 gi|443425944|gb|AGC90847.1| isoleucyl-tRNA ligase [Staphylococcus warneri SG1]
          Length = 916

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/461 (44%), Positives = 282/461 (61%), Gaps = 39/461 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G  +++LHDGPPYANG+
Sbjct: 3   YKDTLLMPKTEFPMRGGLPNKEPKIQEQWDADNQYEKALEKNKGNASYILHDGPPYANGS 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKI+KD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   FKR GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIEIQKKDFKRLGVRGDFNDPYITLKPEYEAAQIRLFGEMAEKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G++++   D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVDK---DAQFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                          K +II  +  
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG------------------------KKYIIAQALA 268

Query: 405 VPTLEA-KWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
               EA +W    + ++K   G +LE     HP  +R   +VI G+++TT++GTG VHTA
Sbjct: 269 ETVAEALEWDQDTIQLEKEFTGKELEYVEAQHPFLDR-TSLVINGEHVTTDAGTGCVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY LP++SP++D+G FTEE G F G+      N AV   L E+ +L+ 
Sbjct: 328 PGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLTEKDALLK 386

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
                H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 387 LNFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDILDAI 427



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/235 (39%), Positives = 134/235 (57%), Gaps = 12/235 (5%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 653
           V I  ++L+Q SD+YRK+R TLR++LGN+ D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNVSDFNPETDSIAEAELLEVDRYLLHRLREFTA 690

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY    +S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEERSSHKRRSMQTVLYQILV 750

Query: 714 SIVRVIAPILPHLAEDVWQNLPF----AYTLEDGSAAEFVFESKWPVLDEKWRTF 764
            + +++APIL H AE+VW + P     +  L D    E V +     L +KW TF
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHVKEESVHLADMPKVEEVDQQ----LLDKWNTF 801


>gi|414154546|ref|ZP_11410864.1| Isoleucine--tRNA ligase (fragment) [Desulfotomaculum hydrothermale
           Lam5 = DSM 18033]
 gi|411453943|emb|CCO08768.1| Isoleucine--tRNA ligase (fragment) [Desulfotomaculum hydrothermale
           Lam5 = DSM 18033]
          Length = 764

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/467 (43%), Positives = 283/467 (60%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           Y  T++LP+T F MR N   +EPEI K W +  ++ +V  KN G+  ++LHDGPPYANG+
Sbjct: 3   YSKTLNLPQTDFPMRGNLPQKEPEILKYWQEIDLYNKVQAKNRGKTKYILHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH LNK+LKD++ +Y+ +  Y   YVPGWD HGLPIE + ++ L  + +  ++P + 
Sbjct: 63  IHLGHTLNKVLKDMVVKYRSMAGYDAPYVPGWDTHGLPIEQQAIKQLGIN-RHQVSPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           RAK   +A    K Q   F+R GV  DW  PY TL P+YEA QI VFG+M+ +GYIY+G 
Sbjct: 122 RAKCRDYALQWAKIQSEEFQRLGVRGDWQRPYYTLLPQYEATQIRVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W     TALAEAE+EY +   S SIY  F +        G+L E   D  + +WTT
Sbjct: 182 KPVYWCACCETALAEAEVEYAD-KTSPSIYVKFPVKDG----RGILPE---DAAVVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+AV+ + +Y +    +L+ G                       ++VA  L
Sbjct: 234 TPWTLPANVAIAVHPEFEYVL----ALVNGHK---------------------VVVAKGL 268

Query: 405 VPTL-EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           +    +A    +  I  T  G  LE     HP   R   +VI G+++T E+GTG VHTAP
Sbjct: 269 LDAFRQAVEAAEAAILDTYKGEQLERVVCRHPFMERDS-LVILGEHVTLEAGTGAVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED+    +YGLP+L+P+D+ G+FT E GKF G  +L D N  +++ L E+  L+  
Sbjct: 328 GHGEEDFQVGKQYGLPVLAPLDNRGRFTAEGGKFEGQFIL-DANKTIIEELKEKNVLLGH 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              +H+YP+ WR K+P  FRATEQWFASV+GFRQ A+ AI  V WVP
Sbjct: 387 GQIKHQYPHCWRCKQPIFFRATEQWFASVDGFRQKALQAIRNVNWVP 433



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 65/88 (73%), Gaps = 1/88 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSS DY  D+ + P +L+Q+++ YRK+R T R+LLGNL+D+  V + ++Y+ 
Sbjct: 618 GADILRLWVSSADYRSDLALSPNILKQIAEAYRKIRNTARFLLGNLYDYNPVQDEVAYEQ 677

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQF 664
           LP +D+ AL +L  ++  +  +YE+Y+F
Sbjct: 678 LPELDRVALLELHKLINQVLAAYENYEF 705


>gi|57530344|ref|NP_001006397.1| isoleucine--tRNA ligase, mitochondrial precursor [Gallus gallus]
 gi|82233833|sp|Q5ZKA2.1|SYIM_CHICK RecName: Full=Isoleucine--tRNA ligase, mitochondrial; AltName:
           Full=Isoleucyl-tRNA synthetase; Short=IleRS; Flags:
           Precursor
 gi|53131721|emb|CAG31841.1| hypothetical protein RCJMB04_12b19 [Gallus gallus]
          Length = 1000

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/492 (41%), Positives = 290/492 (58%), Gaps = 33/492 (6%)

Query: 84  RSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRV 143
           RS      +++ AE E +++ +Y+ TV LP + F  +    + +P+          FL +
Sbjct: 25  RSAASEANSRRPAE-ESRQDSQYRDTVLLPHSRFAAQLPGRL-QPDTELETQQKSGFLEL 82

Query: 144 ----ADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCH 199
                 +   + F LHDGPPYANG+ H+GHALNKILKDI NR+ +++ YKV YVPGWDCH
Sbjct: 83  YSWQRQRKAKQEFCLHDGPPYANGDPHVGHALNKILKDITNRFHMMRGYKVHYVPGWDCH 142

Query: 200 GLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTL 259
           GLPIELK L  +     ++L+P ++R KA +FA+  ++ Q A+F R+G+ ADW N Y T 
Sbjct: 143 GLPIELKALSEVK--GAENLSPVEIRQKAKEFAERAIEKQKAAFIRWGIMADWANCYRTF 200

Query: 260 DPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRM 319
           DP+YEA Q+ VF +M  +G+IY+  KPV WSPS++TALAEAELEY E HVSRS+Y  F +
Sbjct: 201 DPKYEANQLRVFHKMYDKGFIYQDYKPVFWSPSAKTALAEAELEYNEQHVSRSVYMKFPL 260

Query: 320 VSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAP 379
           + +PP  + +++   P   + VWTT PWTVPAN AV      +Y+VV+  +  E      
Sbjct: 261 LKSPPKLASVIDGSSP-ASVLVWTTQPWTVPANQAVCYMPDAEYSVVKCATTGE------ 313

Query: 380 ANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNR 439
                             +I+A+D V +  A   T+  +  T  G DL +    HP    
Sbjct: 314 -----------------HLILAADRVESTAAVLDTQFEVISTCKGVDLADGSCAHPTIAG 356

Query: 440 QCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFS 498
           +   ++  +++T   GTGLVHTAP HG EDY  +  + LP    VD+ G FTE AG +  
Sbjct: 357 RVSPLLPANHVTMTKGTGLVHTAPAHGMEDYNVASHHQLPTECLVDESGHFTEAAGPELK 416

Query: 499 GLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQA 558
             +VL +GN AV+K L    SL+ EE Y H YPYDWRTKKP I RA++QWF +    +  
Sbjct: 417 NKNVLEEGNEAVIKMLQAAGSLLKEEKYVHSYPYDWRTKKPMIIRASKQWFVNTANVKAT 476

Query: 559 AMDAIGQVKWVP 570
           A +A+ +VK +P
Sbjct: 477 AQEALKKVKIIP 488



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 113/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P YGADVLR WV+  +   +V+IGP VL    D   KLR TLR++LGN+  +    +SI 
Sbjct: 674 PPYGADVLRWWVAESNVFTEVLIGPVVLNAARDDINKLRNTLRFMLGNMAGFNPETDSIP 733

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
             ++ ++DQY L  L++    + E+Y+ Y + K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 734 PSEMYIVDQYMLHLLQDYGSKVTEAYKEYDYSKVVRLLQAFCSRNLSNFYFSIIKDRLYC 793

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQTVL+  L  +VR  APILPHLAE+V+Q+LP+         +E VF + 
Sbjct: 794 EEEKDPKRRSCQTVLAEALDVVVRSFAPILPHLAEEVFQHLPYK------KDSEGVFRTG 847

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 848 WINASSGWK 856


>gi|256960187|ref|ZP_05564358.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|293382552|ref|ZP_06628486.1| isoleucine--tRNA ligase [Enterococcus faecalis R712]
 gi|293387847|ref|ZP_06632386.1| isoleucine--tRNA ligase [Enterococcus faecalis S613]
 gi|312901038|ref|ZP_07760329.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0470]
 gi|312906845|ref|ZP_07765842.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 512]
 gi|312978900|ref|ZP_07790626.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 516]
 gi|256950683|gb|EEU67315.1| isoleucyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|291080100|gb|EFE17464.1| isoleucine--tRNA ligase [Enterococcus faecalis R712]
 gi|291082694|gb|EFE19657.1| isoleucine--tRNA ligase [Enterococcus faecalis S613]
 gi|310627099|gb|EFQ10382.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 512]
 gi|311288337|gb|EFQ66893.1| isoleucine--tRNA ligase [Enterococcus faecalis DAPTO 516]
 gi|311291864|gb|EFQ70420.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0470]
          Length = 933

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 293/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 9   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 69  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 127 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 187 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 239 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 273

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 274 LLATVKEAIGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 333 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 392 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 777


>gi|422729994|ref|ZP_16786389.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0012]
 gi|315149525|gb|EFT93541.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0012]
          Length = 933

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 293/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 9   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 69  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 127 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 187 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 239 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 273

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 274 LLATVKEAVGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 333 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 392 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 777


>gi|229548944|ref|ZP_04437669.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229305965|gb|EEN71961.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
          Length = 933

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 293/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 9   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 69  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 127 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 187 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 239 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 273

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 274 LLTTVKEAIGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 333 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 392 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 777


>gi|227555113|ref|ZP_03985160.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|257418593|ref|ZP_05595587.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|307268083|ref|ZP_07549471.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4248]
 gi|307275486|ref|ZP_07556628.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2134]
 gi|312952725|ref|ZP_07771587.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0102]
 gi|384512700|ref|YP_005707793.1| isoleucine--tRNA ligase [Enterococcus faecalis OG1RF]
 gi|422692293|ref|ZP_16750315.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0031]
 gi|422705613|ref|ZP_16763409.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0043]
 gi|422711805|ref|ZP_16768732.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0027]
 gi|422713482|ref|ZP_16770232.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0309A]
 gi|422717491|ref|ZP_16774175.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0309B]
 gi|422727527|ref|ZP_16783968.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0312]
 gi|422735189|ref|ZP_16791463.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1341]
 gi|227175781|gb|EEI56753.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|257160421|gb|EEU90381.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|306507874|gb|EFM77002.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2134]
 gi|306515724|gb|EFM84251.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4248]
 gi|310629241|gb|EFQ12524.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0102]
 gi|315034232|gb|EFT46164.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0027]
 gi|315153079|gb|EFT97095.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0031]
 gi|315156852|gb|EFU00869.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0043]
 gi|315157638|gb|EFU01655.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0312]
 gi|315168031|gb|EFU12048.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1341]
 gi|315574253|gb|EFU86444.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0309B]
 gi|315581592|gb|EFU93783.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0309A]
 gi|327534589|gb|AEA93423.1| isoleucine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 933

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 293/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 9   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 69  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 127 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 187 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 239 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 273

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 274 LLTTVKEAIGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 333 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 392 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 777


>gi|241889685|ref|ZP_04776983.1| isoleucine--tRNA ligase [Gemella haemolysans ATCC 10379]
 gi|241863307|gb|EER67691.1| isoleucine--tRNA ligase [Gemella haemolysans ATCC 10379]
          Length = 910

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/465 (44%), Positives = 285/465 (61%), Gaps = 40/465 (8%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGNL 165
           K T+ +P T F MR N   +EP   + W++  ++ ++ +KN G+ ++VLHDGPPYANGN+
Sbjct: 5   KDTLLMPNTKFPMRGNLPNKEPGFLQRWEEMDLYNKILEKNAGKPSYVLHDGPPYANGNI 64

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKD I +YK +  +   YVPGWD HGLPIE +VL +   D +K +  +K R
Sbjct: 65  HIGHALNKILKDFIVKYKNMNGFVSPYVPGWDTHGLPIE-QVLVNNGVD-RKSMPANKFR 122

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
            K   +A   V  Q A FK+ GV  DW+NPYLTLDP++EA QI VFG+M  +GYIY+G K
Sbjct: 123 NKCKDYALKQVDKQRADFKKLGVLGDWDNPYLTLDPKFEAEQIRVFGKMVDKGYIYKGLK 182

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           P++WSPSS +ALAEAE+EY + H S SIY  F +VS   +               +WTTT
Sbjct: 183 PIYWSPSSESALAEAEIEYHD-HTSPSIYVAFDLVSENGAVE-------KGTKFVIWTTT 234

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN  +AV+   +Y VV+      G+S                      +VA + V
Sbjct: 235 PWTLPANLGIAVHPDFEYQVVKYN----GES---------------------YLVAKERV 269

Query: 406 PTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
             L  K+G       + L G DLE     HP  +R   +++  DY+T +SGTGLVHTAPG
Sbjct: 270 AFLAEKFGWENYETGEVLVGKDLEYLLCQHPFLDRTSTLIL-ADYVTLDSGTGLVHTAPG 328

Query: 465 HGQEDY-VTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           HG +DY V  L+Y L +LSPVD++G  TEEAG+F+G  V  D N  ++ +L E  +L+ +
Sbjct: 329 HGVDDYLVGQLQYKLGVLSPVDNQGVLTEEAGQFAGKFVF-DANKDIIAHLAETGALLKQ 387

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
           E   H YP+DWR+KKP IFRAT QWF SV+ FR   ++A+   K+
Sbjct: 388 EDITHSYPHDWRSKKPIIFRATPQWFCSVDAFRSELLEAVDNTKF 432



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 115/193 (59%), Gaps = 11/193 (5%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS---ISY 634
           GA+++RLW +SVDYT DV I   +L+Q+S+ YRK+R T R+LLGNL++    N    ++Y
Sbjct: 614 GAEIIRLWSASVDYTQDVRISKDILKQVSETYRKIRNTFRFLLGNLYNGSFNNKTDLVAY 673

Query: 635 DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTG 694
           ++L  +D+Y + + E +V  + + YE+YQF  I   +  F  V+LS+FY D  KD LY  
Sbjct: 674 ENLEELDKYMVLKFEKVVAKVLDYYENYQFNSITTELINFFNVELSSFYLDYGKDILYIE 733

Query: 695 GTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF----AYTLEDGSAAEFV- 749
           G  S  R+S  TVL   L   VR++APIL   AE+V+ N+P+    +  L D  A   + 
Sbjct: 734 GEDSHKRQSMLTVLYTVLSKSVRLLAPILSFTAEEVYDNMPYEDAESVHLTDFPAKNVIE 793

Query: 750 ---FESKWPVLDE 759
               E+KW  L E
Sbjct: 794 DAALEAKWDKLLE 806


>gi|357037198|ref|ZP_09098998.1| Isoleucyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
 gi|355361363|gb|EHG09118.1| Isoleucyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
          Length = 933

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 213/496 (42%), Positives = 298/496 (60%), Gaps = 43/496 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  T++LPKT F MR N   REPEI + W+ + ++ +V   N G+  F+LHDGPPYANG+
Sbjct: 3   YGKTLNLPKTDFPMRGNLPQREPEIMQFWEQNDIYRQVQRHNSGKPKFILHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH LNK+LKDI+ ++  +  Y   YVPGWD HGLPIE + +++L  + +  +   + 
Sbjct: 63  IHLGHTLNKVLKDIVVKFHSMVGYDAPYVPGWDTHGLPIEQQAIKNLGLN-RHAVDTVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V  Q   FKR GV  DW +PY+TL P +EA QI VFG+M+ +GYIY+G 
Sbjct: 122 RRKCKEYALKFVDIQREEFKRLGVRGDWEHPYVTLMPHFEARQIGVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W  +  TALAEAE+EY +   S SIY  F +        G+L E   +  + +WTT
Sbjct: 182 KPVYWCATCETALAEAEVEYADKK-SPSIYVKFPVRDG----KGILPE--ENTYVVIWTT 234

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+ AN A+ ++ +  Y ++E    L+G +   A          K+ K+ F       
Sbjct: 235 TPWTLIANLAITLHPEFDYILME----LDGQNMLMA----------KELKEAF------- 273

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
              L      +  I     GS+LE     HP  +R   V+I GD++T E+GTG VHTAPG
Sbjct: 274 ---LHETGLPEGSIISQYKGSELEGIVCSHPFVDRNS-VLILGDHVTLEAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG EDY+  LKY LPILSPVD  G+FT+EAG+F+G  +  + N  ++  L E  +LI  +
Sbjct: 330 HGHEDYLVGLKYNLPILSPVDGRGRFTDEAGQFAG-QLYHEANDGILDTLRETGALIKSD 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRL 584
              H+YP+ WR KKP  FRATEQWFAS++GFRQAA+D I +V+W+     PG+G D +  
Sbjct: 389 KISHQYPHCWRCKKPVFFRATEQWFASIDGFRQAALDEIDKVRWI-----PGWGRDRIHN 443

Query: 585 WVSSVDYTGDVMIGPQ 600
            V++    GD  I  Q
Sbjct: 444 MVAN---RGDWCISRQ 456



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 133/207 (64%), Gaps = 8/207 (3%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSS DY GD+ +   +L+Q+++ YRK+R T R++LGNL+D+    +S+ Y+ 
Sbjct: 618 GADILRLWVSSADYRGDLAVSQNILKQLTEAYRKIRNTCRFMLGNLYDFTPEQDSVPYEK 677

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +P +D+YA+ +L  +++ + E+Y +Y+F  ++  I  F  VD+SN Y D+ KDRLY    
Sbjct: 678 MPELDRYAMLKLHRLIERVLEAYRNYEFHVVYHAIHHFCTVDMSNQYLDIIKDRLYCEKA 737

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 756
            +  RRS QTV+   L ++VR++APIL    E++W+ +P   T++  ++ +    +  P 
Sbjct: 738 DAELRRSAQTVMYQALHALVRLLAPILAFTTEEMWRYVP--KTVDAPASVQL---TDMPE 792

Query: 757 LDEKWRTFPVGEIYFWGKILEVIVVVT 783
            D+++    + E   WG+++++  +VT
Sbjct: 793 PDDRYVDAALEEK--WGRLMKIRGLVT 817


>gi|295113823|emb|CBL32460.1| Isoleucyl-tRNA synthetase [Enterococcus sp. 7L76]
          Length = 926

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 293/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 120 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 232 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 266

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 267 LLATVKEAIGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 326 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 433



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 612 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 671

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 672 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 731

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 732 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 770


>gi|376261454|ref|YP_005148174.1| isoleucyl-tRNA synthetase [Clostridium sp. BNL1100]
 gi|373945448|gb|AEY66369.1| isoleucyl-tRNA synthetase [Clostridium sp. BNL1100]
          Length = 929

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 202/469 (43%), Positives = 285/469 (60%), Gaps = 37/469 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  +++LP+T F MRAN   REPE  K W+D  ++ +   K +G+ +F+LHDGPPYANG 
Sbjct: 5   YGKSLNLPQTDFPMRANLPQREPEFLKKWEDMDIYNKQLKKAEGKPSFILHDGPPYANGG 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G  LNK+LKDI+ +YK +  Y   YVPGWD HGLPIE + ++ L    + ++ P   
Sbjct: 65  IHLGTTLNKVLKDIVVKYKSMSGYYTPYVPGWDTHGLPIEQRAIKELGL-KRHEVGPVVF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     FA   +  Q  SFKR GV ADW +PY+TL PE+EA QIEVFG+M+ +G+IY+G 
Sbjct: 124 REACEGFAMKYLDIQRESFKRLGVRADWEHPYITLKPEFEAKQIEVFGEMAKKGHIYKGL 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP--DLGLAVW 342
           KPV+W P   TALAEAE+EY +   + SIY  F++        G+     P   +   +W
Sbjct: 184 KPVYWCPECETALAEAEIEYADD-TTVSIYVKFQV----RDDKGIFQGVAPKEKINFVIW 238

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTT WT+PAN A+ +N   +Y+VV+            AN +             + ++A+
Sbjct: 239 TTTTWTLPANLAICLNESFEYSVVK------------ANDE-------------YYVLAA 273

Query: 403 DLVP-TLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV  T++A   T+        GS+LE     HP  +R   +VI GD++T E+GTG VHT
Sbjct: 274 ELVENTMKAAAITEYETVAKFKGSELEGILCKHPFLDRD-SIVILGDHVTLEAGTGCVHT 332

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG ED++   KY +P+L PVD +G  T+EAG F+G+      N A+++ L +   L+
Sbjct: 333 APGHGAEDFLVCQKYKIPVLVPVDSKGFLTKEAGPFAGM-FYKKSNPAIIEKLTQDGRLL 391

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             E   H+YP+ WR K P IFRATEQWFAS++GFR+ A+ AI  VKW+P
Sbjct: 392 ASEKITHQYPHCWRCKDPIIFRATEQWFASIDGFRKEALKAIKDVKWIP 440



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/203 (41%), Positives = 136/203 (66%), Gaps = 7/203 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLWV+S DYT D+ I   +L+Q+S++YRK+R T RY+LGN++D+    +S+ Y+
Sbjct: 619 YGADILRLWVASSDYTTDIRISKDLLKQLSEVYRKIRNTARYILGNINDFNPDTDSVDYN 678

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  +D++AL ++ N++K + E+Y++Y+F  +F  I  F +VD+SNFY D+ KDRLYT  
Sbjct: 679 ELNELDKWALSRMNNLIKRVNEAYDTYEFHLMFHAIHNFCVVDMSNFYLDIIKDRLYTSN 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             S  RR+ QTV+   L ++VR++ P+L    E++WQ +P  +  +D +  E V  + WP
Sbjct: 739 ADSKERRAAQTVMYEILHNLVRMLTPVLAFTTEEIWQYMP--HRADDDT--ESVQLNSWP 794

Query: 756 VLDEKWRTFPVGEIYFWGKILEV 778
            ++EK+    + E   W KI E+
Sbjct: 795 QVNEKYVNTELSEK--WEKIFEL 815


>gi|229546850|ref|ZP_04435575.1| isoleucyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|257086362|ref|ZP_05580723.1| isoleucyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257089412|ref|ZP_05583773.1| isoleucyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|307272017|ref|ZP_07553283.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0855]
 gi|307289395|ref|ZP_07569349.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0109]
 gi|312904565|ref|ZP_07763723.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0635]
 gi|422689640|ref|ZP_16747744.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0630]
 gi|422703300|ref|ZP_16761122.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1302]
 gi|422722956|ref|ZP_16779505.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2137]
 gi|422730877|ref|ZP_16787258.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0645]
 gi|422739829|ref|ZP_16794995.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2141]
 gi|424671135|ref|ZP_18108150.1| isoleucine--tRNA ligase [Enterococcus faecalis 599]
 gi|229308015|gb|EEN74002.1| isoleucyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256994392|gb|EEU81694.1| isoleucyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256998224|gb|EEU84744.1| isoleucyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|306499650|gb|EFM69013.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0109]
 gi|306511312|gb|EFM80316.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0855]
 gi|310632078|gb|EFQ15361.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0635]
 gi|315026979|gb|EFT38911.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2137]
 gi|315144388|gb|EFT88404.1| isoleucine--tRNA ligase [Enterococcus faecalis TX2141]
 gi|315162932|gb|EFU06949.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0645]
 gi|315165132|gb|EFU09149.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1302]
 gi|315577381|gb|EFU89572.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0630]
 gi|402359695|gb|EJU94320.1| isoleucine--tRNA ligase [Enterococcus faecalis 599]
          Length = 933

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 293/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 9   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 69  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 127 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 187 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 239 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 273

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 274 LLATVKEAVGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 333 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 392 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 777


>gi|327398468|ref|YP_004339337.1| isoleucyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181097|gb|AEA33278.1| Isoleucyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 930

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/472 (43%), Positives = 287/472 (60%), Gaps = 37/472 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRV-ADKNDGENFVLHDGPPYANGN 164
           YK T+ LPKT F M+AN + +EP + K WD+  ++ ++  D+    +F+LHDGPPYANG+
Sbjct: 3   YKDTLLLPKTDFPMKANLIQKEPVMLKKWDEMDIYHKILEDRKSRPSFILHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGH LNK+LKDI+ + K +  Y   YVPGWDCHGLPIE  + + + ++ K  +  S+ 
Sbjct: 63  IHMGHVLNKVLKDIVVKSKTMMGYYSPYVPGWDCHGLPIEHNIEKEIGKNKKNSMPKSEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +AK  +  Q   FKR GV+ DW+NPYLT+D +YEA  +   G+   +G +Y+ K
Sbjct: 123 RRMCRDYAKKYIDIQREEFKRLGVFGDWDNPYLTMDFKYEADTLRELGKFVEKGLVYKEK 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD-LGLAVWT 343
           KPV+W  S +TALA AE+EY +   S SIY  F  +S   S       FL   +   +WT
Sbjct: 183 KPVYWCYSCKTALALAEVEYQDDE-SESIYVRFGFISDLGSED---KRFLGKAVSAIIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN AVAVN    YA V+I                 P +V         +VA+D
Sbjct: 239 TTPWTLPANLAVAVNPNFDYAFVQIT----------------PRHVY--------LVAAD 274

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV  L  K+  K   I KT+ G++LE+    HP  +R+  +++ GD++T ++GTGLVHTA
Sbjct: 275 LVKGLMEKFEIKEYEIIKTVKGAELEDYILAHPFYDRESRIIL-GDHVTLDAGTGLVHTA 333

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG EDYV   KY LPI SPVDD+G+F  E   F+G+ VL + N  +++ L ++  L+ 
Sbjct: 334 PGHGDEDYVIGKKYHLPIYSPVDDDGRFLPEVEYFAGMHVL-EANPKIIELLKQKEMLVK 392

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEG----FRQAAMDAIGQVKWVP 570
           +E   H YP+ WR K P IFR+TEQWF S++      R+ A++AI + KW+P
Sbjct: 393 QEKITHSYPHCWRCKNPIIFRSTEQWFISIDNPKGELRKKALEAIDKTKWIP 444



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 103/162 (63%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +    YGA++LRLW S+ DY  DV +  +++R++ D YRK+R T+R+LLGNL+D+   
Sbjct: 616 PEKIIKKYGAELLRLWASATDYREDVRLSDEIMRRLVDNYRKIRNTIRFLLGNLNDFDES 675

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
            ++ YD+L  ID++ L + E++ + + ++YE Y++  I++ +  + I+ LSNFY DV KD
Sbjct: 676 KALKYDELEEIDKWVLAETEHLKEKLLKAYEDYEYHVIYRNMANYCILVLSNFYLDVLKD 735

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
           RLY     S  R S QT +   L  IV  +APIL   AE+ +
Sbjct: 736 RLYCEAKDSKKRLSAQTAMDEILKVIVFYMAPILSFTAEEAY 777


>gi|255971457|ref|ZP_05422043.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256957096|ref|ZP_05561267.1| isoleucyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|257077892|ref|ZP_05572253.1| isoleucyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|384518109|ref|YP_005705414.1| isoleucyl-tRNA synthetase [Enterococcus faecalis 62]
 gi|397699396|ref|YP_006537184.1| isoleucyl-tRNA synthetase [Enterococcus faecalis D32]
 gi|430361446|ref|ZP_19426666.1| isoleucyl-tRNA synthetase [Enterococcus faecalis OG1X]
 gi|430368038|ref|ZP_19428020.1| isoleucyl-tRNA synthetase [Enterococcus faecalis M7]
 gi|255962475|gb|EET94951.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256947592|gb|EEU64224.1| isoleucyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256985922|gb|EEU73224.1| isoleucyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|323480242|gb|ADX79681.1| isoleucyl-tRNA synthetase [Enterococcus faecalis 62]
 gi|397336035|gb|AFO43707.1| isoleucyl-tRNA synthetase [Enterococcus faecalis D32]
 gi|429512467|gb|ELA02073.1| isoleucyl-tRNA synthetase [Enterococcus faecalis OG1X]
 gi|429516543|gb|ELA06033.1| isoleucyl-tRNA synthetase [Enterococcus faecalis M7]
          Length = 928

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 293/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 4   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 63

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 64  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 121

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 122 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 181

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 182 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 233

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 234 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 269 LLTTVKEAIGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 328 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 386

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 387 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 435



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 614 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 673

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 674 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 733

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 734 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 772


>gi|256852656|ref|ZP_05558027.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|300859774|ref|ZP_07105862.1| isoleucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|428766511|ref|YP_007152622.1| isoleucyl-tRNA synthetase [Enterococcus faecalis str. Symbioflor 1]
 gi|256712001|gb|EEU27038.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|300850592|gb|EFK78341.1| isoleucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|427184684|emb|CCO71908.1| isoleucyl-tRNA synthetase [Enterococcus faecalis str. Symbioflor 1]
          Length = 926

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 293/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 120 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 232 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 266

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 267 LLATVKEAVGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 326 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 433



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 612 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 671

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 672 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 731

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 732 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 770


>gi|29375585|ref|NP_814739.1| isoleucyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|257421252|ref|ZP_05598242.1| isoleucyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294779257|ref|ZP_06744661.1| isoleucine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|81437154|sp|Q836V1.1|SYI_ENTFA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|29343046|gb|AAO80809.1| isoleucyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|257163076|gb|EEU93036.1| isoleucyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294453624|gb|EFG22022.1| isoleucine--tRNA ligase [Enterococcus faecalis PC1.1]
          Length = 926

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 293/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 62  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 120 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 232 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 266

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 267 LLTTVKEAIGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 326 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 433



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 612 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 671

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 672 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 731

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 732 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 770


>gi|257415622|ref|ZP_05592616.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|257157450|gb|EEU87410.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
          Length = 933

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 293/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 9   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 69  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 127 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 187 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 239 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 273

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 274 LLATVKEAIGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 333 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGV-FYDKANPMITELLEEKGALLK 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 392 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 777


>gi|422685581|ref|ZP_16743797.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4000]
 gi|315029692|gb|EFT41624.1| isoleucine--tRNA ligase [Enterococcus faecalis TX4000]
          Length = 933

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 293/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 9   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 69  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 127 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 187 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 239 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 273

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 274 LLATVKEAVGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 333 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 392 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQQIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 777


>gi|256617927|ref|ZP_05474773.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256962571|ref|ZP_05566742.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256597454|gb|EEU16630.1| isoleucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256953067|gb|EEU69699.1| isoleucyl-tRNA synthetase [Enterococcus faecalis HIP11704]
          Length = 928

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 293/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 4   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 63

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 64  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 121

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 122 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 181

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 182 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 233

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 234 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 269 LLATVKEAVGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 328 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 386

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 387 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 435



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 614 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 673

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 674 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 733

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 734 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 772


>gi|256761761|ref|ZP_05502341.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256683012|gb|EEU22707.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T3]
          Length = 928

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 293/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 4   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 63

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 64  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 121

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 122 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 181

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 182 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 233

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 234 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 269 LLATVKEAVGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 328 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 386

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 387 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 435



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 614 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 673

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 674 LRSVDKYMTLRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 733

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 734 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 772


>gi|347727024|gb|AEP19870.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. 11-28]
          Length = 908

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 211/467 (45%), Positives = 285/467 (61%), Gaps = 40/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +P+T F MR N   REP +H+ W+   ++ RV +KN G+  ++LHDGPPYANG+
Sbjct: 3   YKDTLLMPETEFAMRGNLPKREPAMHEAWEQMDLYNRVQEKNAGKPQYILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNK+LKDII R+K L  Y+   +PGWD HGLPIE   LQ    + +K++T ++ 
Sbjct: 63  IHMGHALNKVLKDIIVRFKSLNGYQSPMIPGWDTHGLPIE-NALQKAGVN-RKEMTVAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K A +A   V +Q   FKR G+ AD++NPY+TL PEYEAAQI +FG M+ +GYIY+GK
Sbjct: 121 REKCAAYAMEQVNSQREQFKRLGLLADFDNPYITLLPEYEAAQIRLFGTMAEKGYIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S +IY  F++V          + F+      +WTT
Sbjct: 181 KPVYWSPSSESALAEAEIEYYDKK-SPAIYVAFQVVDG-KDVLATTDHFV------IWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  +AV+ +L Y  +E                        D K    IVA  L
Sbjct: 233 TPWTIPANLGIAVSDELTYTRIE-----------------------HDGKG--YIVAETL 267

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  +    G T   +  +  G + E+    HP+ +R   V+I GD++T ++ TGLVHTAP
Sbjct: 268 VEDVTTALGWTDYTVSGSWNGREFEHMTAQHPLYDRTSLVMI-GDHVTADA-TGLVHTAP 325

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++DY     YGL +L PVDD G  TEEA  F GL    D N  +   L+E   L+  
Sbjct: 326 GHGEDDYRVGQAYGLDVLCPVDDRGYMTEEAPGFEGL-FYEDANKQIGMKLEENGYLLNL 384

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +  +H YP+DWRTKKP IFRAT QWFAS++ FR   +  I +V WVP
Sbjct: 385 KFIKHSYPHDWRTKKPVIFRATPQWFASIKDFRDDMLREIKEVNWVP 431



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 105/159 (66%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 636
           YGA+++RLWVSSVDY  DV       +Q+S++YRK+R TLR+LLGNL+ +     ++++D
Sbjct: 610 YGAEIVRLWVSSVDYQSDVRASHDNFKQVSEVYRKIRNTLRFLLGNLNGFDPSMRVAFED 669

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +P  D++   +L+ +   + ++Y+++ F  ++ +   F + +LS+FY D  KD LY    
Sbjct: 670 MPEADRFMATKLKQLQTKVVKAYDTFDFMAVYHLSHNFCVNELSSFYLDFTKDILYIERE 729

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
               RR+ QTV+   ++++ +++APILPH A++VWQ +P
Sbjct: 730 DDARRRAVQTVMYDTVVTLTKLLAPILPHTADEVWQEVP 768


>gi|422868627|ref|ZP_16915165.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1467]
 gi|329574341|gb|EGG55913.1| isoleucine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 771

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 293/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 9   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 69  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 127 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 187 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 239 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 273

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 274 LLTTVKEAIGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 333 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 392 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/153 (42%), Positives = 99/153 (64%), Gaps = 2/153 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
              + RR  QTV    L+S+ +++ PI+PH  E
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTTE 771


>gi|419840444|ref|ZP_14363834.1| isoleucine--tRNA ligase [Fusobacterium necrophorum subsp.
           funduliforme ATCC 51357]
 gi|386907833|gb|EIJ72534.1| isoleucine--tRNA ligase [Fusobacterium necrophorum subsp.
           funduliforme ATCC 51357]
          Length = 931

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/474 (43%), Positives = 291/474 (61%), Gaps = 42/474 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYAN 162
           E  Y  T+ LPKT+F M+ N   +EP   K W++H+++ +   K   E+F+LHDGPPYAN
Sbjct: 3   EKDYAETLHLPKTSFQMKGNLPNKEPNYIKKWEEHKIYEKGLSKGK-ESFILHDGPPYAN 61

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           GN H+GHALNKILKDII +YK LQ YK  Y+PGWD HGLPIELKV++ L   A KD+T  
Sbjct: 62  GNTHIGHALNKILKDIIIKYKTLQGYKAPYIPGWDTHGLPIELKVMEKLGSKA-KDMTAL 120

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           ++R    ++A   V  Q   F R GV   W +PYLTL P++EA Q+++FG++   GYI++
Sbjct: 121 EIRKLCKEYALRWVDIQREEFIRMGVIGKWEDPYLTLKPQFEAKQLQIFGELYANGYIFK 180

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLA 340
           G KP++WSP + TALAEAE+EY + H S SIY   +      + + LL +  F  +  + 
Sbjct: 181 GLKPIYWSPVTETALAEAEIEYHD-HTSPSIYVKMK------ANADLLEKISFPEEAYVV 233

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN A+++N + +Y V                 K+  GN         +I+
Sbjct: 234 IWTTTPWTLPANVAISLNPEFEYGVY----------------KTEKGN---------LIL 268

Query: 401 ASDLVPTLEAKWGTKL-VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
             +L  T  A+ G +   + K   GS LE   Y HP  +R   +++ G ++T ++GTG V
Sbjct: 269 GKELAETAFAEMGIEAPELLKEFKGSVLEMTSYQHPFLDRTGYIIL-GTHVTADAGTGCV 327

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQM 518
           HTAPGHGQEDYV   +Y +PI+SP++ +G  TEEAG  F+GL      N  ++++L E  
Sbjct: 328 HTAPGHGQEDYVVGCRYNMPIVSPINYKGYLTEEAGPLFAGL-FYEKANKTIIEHLTEIG 386

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
            L+  +   H YP+DWR+K P IFRATEQWF   EG   R+ A+ A+ +V+++P
Sbjct: 387 LLLKMKEITHSYPHDWRSKTPVIFRATEQWFVKAEGSDLREKALKALDEVEFIP 440



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/210 (42%), Positives = 133/210 (63%), Gaps = 8/210 (3%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    YGAD+LRLW +SVDY  DV I   +++QM++ YR++R T RY+LGN + +   
Sbjct: 614 PEKIIKQYGADILRLWCASVDYREDVKISDNIVKQMAETYRRVRNTARYILGNSYGFDPK 673

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            +++ Y DL  ID++AL +LE + K++ ESYE Y+F+ +FQ I  F  +D+S FY D+ K
Sbjct: 674 KDAVPYQDLLEIDKWALHKLEMLKKSVGESYEKYEFYNVFQEIHYFAGIDMSAFYLDIIK 733

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 748
           DRLYT    S  RRS QTV+   L+++V++IAPIL   AE++W++LP   TL D    E 
Sbjct: 734 DRLYTEKEDSLARRSAQTVMIEILMTLVKMIAPILSFTAEEIWEHLP--ETLRD---QES 788

Query: 749 VFESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           V  + W V+ E+     V E   W KI ++
Sbjct: 789 VLLTDWYVMKEEHINEKVEEK--WAKIQKI 816


>gi|422721039|ref|ZP_16777644.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0017]
 gi|315031711|gb|EFT43643.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0017]
          Length = 933

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 292/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 9   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 69  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 127 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 187 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 239 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 273

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T  +GTGLVHTA
Sbjct: 274 LLTTVKEAIGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLNAGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 333 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 392 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 777


>gi|307278946|ref|ZP_07560005.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0860]
 gi|306504333|gb|EFM73544.1| isoleucine--tRNA ligase [Enterococcus faecalis TX0860]
          Length = 933

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 292/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W+   ++ +    N+G+  FVLHDGPPYANG
Sbjct: 9   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEKKGLYEQRQKLNEGKPTFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 69  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 127 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 187 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 239 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 273

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 274 LLATVKEAIGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 333 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 392 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 777


>gi|255974072|ref|ZP_05424658.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|255966944|gb|EET97566.1| isoleucyl-tRNA synthetase [Enterococcus faecalis T2]
          Length = 928

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 292/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W+   ++ +    N+G+  FVLHDGPPYANG
Sbjct: 4   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEKKGLYEQRQKLNEGKPTFVLHDGPPYANG 63

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 64  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 121

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 122 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 181

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +        GLL+    +    +WT
Sbjct: 182 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVADG----KGLLDN---ETAFVIWT 233

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 234 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 269 LLATVKEAIGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 328 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 386

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 387 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 435



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 614 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 673

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 674 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 733

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 734 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 772


>gi|352516940|ref|YP_004886257.1| isoleucyl-tRNA synthetase [Tetragenococcus halophilus NBRC 12172]
 gi|348601047|dbj|BAK94093.1| isoleucyl-tRNA synthetase [Tetragenococcus halophilus NBRC 12172]
          Length = 930

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 210/469 (44%), Positives = 284/469 (60%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE    + W+++ ++ R    N+G+  FVLHDGPP+ANG
Sbjct: 2   KMKDTLHLGKTKFPMRGNLPNREGNWQQEWEENNIYERRQKINEGKPTFVLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHALNKI KDII R K +  Y+  YVPGWD HGLP+E +VL +     +K++T ++
Sbjct: 62  NIHIGHALNKISKDIIIRAKSMSGYRAPYVPGWDTHGLPVE-QVLAN-KGIKRKEMTTAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A   V  Q   FKR GV  +W  PYLTL P YEAA+I VFG+M+ +GYIY+G
Sbjct: 120 YRKKCYEYAMTQVDKQRDDFKRLGVQGEWEAPYLTLAPSYEAAEIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F++V        LL+E   +    +WT
Sbjct: 180 MKPIYWSPSSESSLAEAEIEYKDIK-SPSIYVSFQVVDG----KDLLDE---NTSFIIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P+N A+ V+    Y  V           A  NK                +VA D
Sbjct: 232 TTPWTIPSNLAITVHPDFNYVQVN----------ADGNK---------------YVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  ++   G   + I +   G  LEN    HP  +R   ++I GD++T +SGTGLVHT+
Sbjct: 267 LLDEVQEVLGWDNVEILQAFKGQQLENMTAQHPFYDRTS-LLILGDHVTLDSGTGLVHTS 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY  + KYGLP+LSPVD  G FTEEA  F G+      N  V   L E+ +L+ 
Sbjct: 326 PGHGEDDYYVAKKYGLPVLSPVDSRGVFTEEAPGFEGI-FYDKANPMVTDLLKEKGALLN 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + Y H YP+DWRTKKP IFRAT QWFAS++ FRQ  +D I +V W+ P
Sbjct: 385 LDFYVHSYPHDWRTKKPVIFRATPQWFASIDQFRQNILDEIEKVDWIIP 433



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 109/165 (66%), Gaps = 2/165 (1%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GAD+LRLWVSSVDY  DV +   +L+Q+S++YRK+R T+R+LL N  D+  
Sbjct: 603 VPDKVIKQMGADILRLWVSSVDYESDVRVSMDILKQVSEVYRKIRNTVRFLLANTSDFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDV 686
             N + + DL  +D+Y + +L  ++K +R++ YE Y F  +++ I  FI VDLS+FY D 
Sbjct: 663 KTNGVEFVDLRSVDKYMMIRLNEVIKEVRDNGYEKYDFLHVYRTILNFITVDLSSFYLDF 722

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
           AKD +Y     S++RR  QTV     ++I +++API+PH AE++W
Sbjct: 723 AKDVVYIEEEDSYSRRCMQTVFYQATVAIAKLLAPIIPHTAEEIW 767


>gi|333371304|ref|ZP_08463259.1| isoleucine--tRNA ligase [Desmospora sp. 8437]
 gi|332976331|gb|EGK13187.1| isoleucine--tRNA ligase [Desmospora sp. 8437]
          Length = 931

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/474 (42%), Positives = 288/474 (60%), Gaps = 37/474 (7%)

Query: 99  EKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDG 157
           E   E  YK T++LP+T F MR N   REPE+   WD+  ++ +V ++  G+  FVLHDG
Sbjct: 2   EGVREMDYKQTLNLPQTRFPMRGNLPNREPEMQAEWDEKNIYHQVLERRKGKPKFVLHDG 61

Query: 158 PPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKK 217
           P Y+NGN+H+GHA+N++LKD+I R+K LQ +   Y+PG+D HG+PIE  V+     + ++
Sbjct: 62  PIYSNGNIHIGHAMNRVLKDMIIRFKSLQGFDTPYIPGYDTHGMPIEHAVITKKKLN-RR 120

Query: 218 DLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQ 277
           +L P KLR +  ++A + V  Q   FKR G+  DW +PY+TL P YEA QI +FG+M  +
Sbjct: 121 ELDPVKLREECREYALSFVNRQRDQFKRLGILGDWEHPYVTLAPRYEAKQIRIFGEMVKK 180

Query: 278 GYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDL 337
           GY+Y+G + ++WSPSS +ALA+AE+EY E   S SIY  F +      + GL    + + 
Sbjct: 181 GYVYQGYRSIYWSPSSESALADAEVEYKEKR-SPSIYVTFPV----KESRGLFP--VENA 233

Query: 338 GLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVF 397
            + +WTTTPWT+PAN  +AVNA   YA+V+                           +  
Sbjct: 234 YVVIWTTTPWTIPANLGIAVNADFTYALVKT-------------------------GERH 268

Query: 398 IIVASDLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGT 456
           +++A +LV  +    G T      T  G++LE     HP  +R+ P +I GD++T ++GT
Sbjct: 269 LLLAEELVEDVMKVAGITSFETVATFKGAELEGVVCRHPFYDRESP-LICGDHVTLDAGT 327

Query: 457 GLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDE 516
           G VHTAPGHG ED+    KY L +L PVD++G+FT EA  F G+    D N  V + L++
Sbjct: 328 GCVHTAPGHGAEDFELGKKYNLGVLCPVDEKGRFTAEAPGFEGM-FYDDANKVVTEKLEK 386

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Q  L+      H+YP+DWRTKKP IFRATEQWF S++GFR   ++ I +VKW P
Sbjct: 387 QGDLLKLSFITHQYPHDWRTKKPVIFRATEQWFVSIDGFRDKLLEEIQKVKWTP 440



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 74/167 (44%), Positives = 110/167 (65%), Gaps = 1/167 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P Q    YGAD+LRLWV+SVDY  DV +  ++L+Q++++YRK+R T R+LLGNL D++  
Sbjct: 613 PLQVMKTYGADILRLWVASVDYQADVRVSEKILKQIAEVYRKIRNTFRFLLGNLSDFQPE 672

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + +    L  +D+YAL +L+ +V+ + + +E+Y+F  ++  I  F  V LS FY DV K
Sbjct: 673 TDRVEPSRLDELDRYALVKLQRLVEQVVKGFENYEFHSVYTHIHHFCTVFLSQFYLDVLK 732

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           DRLY        RRS QTV+   LL +VR++ PILPH  E+VW+ +P
Sbjct: 733 DRLYILPQGDEKRRSSQTVMYEILLGLVRMVHPILPHTTEEVWKFIP 779


>gi|347726977|gb|AEP19847.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. EPVM]
          Length = 908

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 213/470 (45%), Positives = 288/470 (61%), Gaps = 46/470 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +P+T F MR N   REP +H+ W+   ++ RV +KN G+  ++LHDGPPYANG+
Sbjct: 3   YKDTLLMPETEFAMRGNLPKREPAMHEAWEQMDLYNRVQEKNAGKPQYILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNK+LKDII R+K L  Y+   +PGWD HGLPIE   LQ    + +K++T ++ 
Sbjct: 63  IHMGHALNKVLKDIIVRFKSLNGYQSPMIPGWDTHGLPIE-NALQKAGVN-RKEMTVAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K A +A   V +Q   FKR G+ AD++NPY+TL PEYEAAQI +FG M+ +GYIY+GK
Sbjct: 121 REKCAAYAMEQVNSQREQFKRLGLMADFDNPYITLLPEYEAAQIRLFGTMAEKGYIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLL---NEFLPDLGLAV 341
           KPV+WSPSS +ALAEAE+EY +   S +IY  F++V       G+L   + F+      +
Sbjct: 181 KPVYWSPSSESALAEAEIEYYDKK-SPAIYVAFQVVDG----KGVLATTDHFV------I 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  +AV+ +L Y  +E                        D K    IVA
Sbjct: 230 WTTTPWTIPANLGIAVSDELTYTRIE-----------------------HDGKG--YIVA 264

Query: 402 SDLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
             LV  +    G T   +  +  G + E+    HP+ +R   V+I GD++T ++ TGLVH
Sbjct: 265 ETLVEDVTTALGWTDYTVSGSWNGREFEHMTAQHPLYDRTSLVMI-GDHVTADA-TGLVH 322

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG++DY     YGL +L PVDD G  TEEA  F GL    D N  +   L+E   L
Sbjct: 323 TAPGHGEDDYRVGQAYGLDVLCPVDDRGYMTEEAPGFEGL-FYEDANKQIGMKLEENGYL 381

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +  +  +H YP+DWRTKKP IFRAT QWFAS++ FR   +  I +V WVP
Sbjct: 382 LNLKFIKHSYPHDWRTKKPVIFRATPQWFASIKDFRADMLREIEEVNWVP 431



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 105/159 (66%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 636
           YGA+++RLWVSSVDY  DV       +Q+S++YRK+R TLR+LLGNL+ +     ++++D
Sbjct: 610 YGAEIVRLWVSSVDYQADVRASHDNFKQVSEVYRKIRNTLRFLLGNLNGFDPSMRVAFED 669

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +P  D++   +L+ +   + ++Y+++ F  ++ +   F + +LS+FY D  KD LY    
Sbjct: 670 MPEADRFMATKLKQLQTKVVKAYDTFDFMAVYHLSHNFCVNELSSFYLDFTKDILYIERE 729

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
               RR+ QTV+   ++++ +++APILPH A++VWQ +P
Sbjct: 730 DDARRRAVQTVMYDTVVTLTKLLAPILPHTADEVWQEVP 768


>gi|163790528|ref|ZP_02184957.1| isoleucyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159874131|gb|EDP68206.1| isoleucyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 746

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/470 (44%), Positives = 290/470 (61%), Gaps = 45/470 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N  VRE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 2   KMKETLQLGKTNFPMRGNLPVRELEWQKNWEELDIYGQRQKINEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           N+H+GHALNKI KDII RYK +  ++  YVPGWD HGLPIE    Q+L      +K+++ 
Sbjct: 62  NIHIGHALNKISKDIIVRYKSMSGFRSPYVPGWDTHGLPIE----QALTNKGVKRKEMSI 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R    ++A   V  Q   FKR GV  +W+ PY+TL  EYE AQI VFG+M+ +GYIY
Sbjct: 118 AEFRQLCEEYAWEQVNKQKEDFKRLGVAGEWDYPYVTLTKEYEEAQIRVFGKMAEKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G KP++WSPSS +ALAEAE+EY +   S SIY  F++V       GL++E   D    +
Sbjct: 178 KGLKPIYWSPSSESALAEAEIEYKDVK-SASIYVAFKVVDG----KGLIDE---DTSFVI 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P+N A+ VN    Y+V                       V+ D KK   +VA
Sbjct: 230 WTTTPWTIPSNLAITVNPDYDYSV-----------------------VVADGKKY--VVA 264

Query: 402 SDLVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
            DL+ T+  E  W     I++ L G +LE     HP+ +R   ++I GD++T E+GTGLV
Sbjct: 265 KDLIETVAQEIGWNQVETIQE-LKGKELELMTAQHPMYDR-TSLLILGDHVTLEAGTGLV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG +D++   KY L +LSPVDD+G FT+EA    G+      N  + ++L+++ +
Sbjct: 323 HTAPGHGDDDFIVGQKYKLGVLSPVDDKGCFTDEAPGLEGI-FYDKANKVITEWLEKEEA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
           L+    + H YP+DWRTKKP IFRAT QWFAS++ FR   ++A+  V+WV
Sbjct: 382 LLKLNFFTHSYPHDWRTKKPVIFRATPQWFASIDKFRGDILEAVEGVEWV 431



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 58/132 (43%), Positives = 88/132 (66%), Gaps = 1/132 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GAD++RLWVSSVD   DV +  ++L+Q+S++YRK+R T+R+LL N  D+    N ++++D
Sbjct: 612 GADIIRLWVSSVDTQADVRVSDEILKQVSEVYRKIRNTMRFLLANTDDYDPSVNKVAFED 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y + +L  +V+ +   YE Y+F  I+Q+I  F  VDLS FY D AKD +Y    
Sbjct: 672 LRSVDKYLMIRLNQLVEKVEVHYEKYEFSSIYQLINNFCTVDLSQFYLDFAKDVVYIEAE 731

Query: 697 TSFTRRSCQTVL 708
            S+ RR+ QTV 
Sbjct: 732 DSYERRAMQTVF 743


>gi|295398665|ref|ZP_06808689.1| isoleucine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973100|gb|EFG48903.1| isoleucine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 929

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 213/471 (45%), Positives = 285/471 (60%), Gaps = 41/471 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANG 163
           + K T++L KT F MR N  V+E E    W++  V+ +  +KN D   +VLHDGPPYANG
Sbjct: 8   KMKETLNLGKTKFPMRGNLPVKEVERQAEWNEEDVYAQRQEKNKDKTPWVLHDGPPYANG 67

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHA+NKI KDII R K +  ++  YVPGWD HGLPIE  +  S  +  +K +T ++
Sbjct: 68  NIHIGHAMNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQALTNSGVD--RKSMTVAE 125

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   +  Q   FKR GV  DW NPYLTL PE+EA QI +FG M  +G IY+G
Sbjct: 126 FRKLCEEYAWKQINGQRDDFKRLGVAGDWENPYLTLAPEFEAQQIRLFGDMYEKGLIYKG 185

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS + LAEAE+EY +   S SIY  F+       T G L E   +    +WT
Sbjct: 186 AKPVYWSPSSESTLAEAEIEYQDVE-SPSIYVAFKA----RDTKGKLPE---NTEFIIWT 237

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P+N A+AVN   +Y+VV           A A++K               +VA+D
Sbjct: 238 TTPWTIPSNMAIAVNPNFEYSVV-----------AVADRK--------------FVVATD 272

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           LV +L  E +W    V  + + G DLE     HP  +R   ++I GD++TTESGTGLVHT
Sbjct: 273 LVNSLATELEWVDYTVEGEPVKGHDLEYMVAEHPYYDRDS-LLILGDHVTTESGTGLVHT 331

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY  SL Y L +LSP+DD+G FT+EA  F G+     GN   ++ + E   L+
Sbjct: 332 APGHGEDDYFASLNYNLDVLSPLDDQGHFTDEAPGFEGI-FYEKGNEISIEKMKENNRLL 390

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQVKWVPP 571
             + + H YP+DWRTKKP I+RAT QWF SVE  R+  +D I  +VKW  P
Sbjct: 391 KLDYFSHSYPHDWRTKKPVIYRATPQWFCSVEKIRERTLDVIDNEVKWWHP 441



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 106/158 (67%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GAD+LRLWVSSVD   DV I   +L Q+++ YR++R T+R+LLGNL+D+    ++++Y+D
Sbjct: 620 GADILRLWVSSVDTYYDVRISDDILGQVAENYRRIRNTVRFLLGNLYDFDAKKDAVAYED 679

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  IDQY + +L  +V+N+R +Y+++ F  +   I  F+ +D+SNFY D AKD +Y    
Sbjct: 680 LASIDQYMMNRLNEMVRNVRHAYDTFDFMTVNHEITNFLTLDMSNFYLDYAKDVVYIELP 739

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV+ A   ++  ++ P++PH  E++W  L
Sbjct: 740 ESAQRRNMQTVMYAVAKAVTTLLTPVIPHTTEEIWTYL 777


>gi|424705584|ref|ZP_18141614.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV63]
 gi|424712418|ref|ZP_18144601.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV65]
 gi|424721629|ref|ZP_18150711.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV72]
 gi|424723708|ref|ZP_18152663.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV73]
 gi|424751826|ref|ZP_18179847.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV93]
 gi|402379008|gb|EJV12829.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV63]
 gi|402380912|gb|EJV14651.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV65]
 gi|402390796|gb|EJV24117.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV72]
 gi|402397417|gb|EJV30435.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV73]
 gi|402405322|gb|EJV37919.1| isoleucine--tRNA ligase [Enterococcus faecalis ERV93]
          Length = 933

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 293/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 9   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 69  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 127 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +V       GLL+    +    +WT
Sbjct: 187 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVVDG----KGLLDN---ETAFVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+ AN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 239 TTPWTLSANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 273

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 274 LLSTVKEAIGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 333 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 392 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 440



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 104/159 (65%), Gaps = 2/159 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVD   DV +   +L Q+S++YRK+R T+R+LL N  D+    ++++Y D
Sbjct: 619 GADILRLWVSSVDAEADVRVSMDILNQVSEVYRKIRNTMRFLLANTSDFNPAEHTVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           L  +D+Y   +L  +++ IRE+ YE Y F  I++ +  F+ VDLS+FY D AKD +Y   
Sbjct: 679 LRSVDKYMTVRLNQVIQEIRENGYEKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              + RR  QTV    L+S+ +++ PI+PH AE++W  L
Sbjct: 739 ENDYQRRCMQTVFYQTLVSLTKLLTPIIPHTAEEIWSFL 777


>gi|417642913|ref|ZP_12292991.1| isoleucine--tRNA ligase [Staphylococcus warneri VCU121]
 gi|330686341|gb|EGG97946.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 916

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/461 (44%), Positives = 282/461 (61%), Gaps = 39/461 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP+I + WD    + +  +KN G  +++LHDGPPYANG+
Sbjct: 3   YKDTLLMPKTEFPMRGGLPNKEPKIQEQWDADNQYEKALEKNKGNASYILHDGPPYANGS 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKI+KD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ ++ 
Sbjct: 63  LHMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   FKR GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIEIQKKDFKRLGVRGDFNDPYITLKPEYEAAQIRLFGEMAEKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G++++   D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFDV----KDDKGVVDK---DAQFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +                          K +II  +  
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNVNG------------------------KKYIIAQALA 268

Query: 405 VPTLEA-KWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
               EA +W    + ++K   G +LE     HP  +R   +VI G+++TT++GTG VHTA
Sbjct: 269 ETVAEALEWDQDTIQLEKEFTGKELEYVEAQHPFLDR-TSLVINGEHVTTDAGTGCVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+   KY LP++SP++D+G FTEE G F G+      N AV   L ++ +L+ 
Sbjct: 328 PGHGEDDYIVGQKYDLPVISPLNDKGVFTEEGGPFEGM-FYDKANKAVTDLLTKKDALLK 386

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
                H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI
Sbjct: 387 LNFITHSYPHDWRTKKPVIFRATPQWFASINKVRQDILDAI 427



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/235 (39%), Positives = 134/235 (57%), Gaps = 12/235 (5%)

Query: 535 RTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGD 594
           R + P  F  +  +    EG + +   ++G V  VP Q     GAD+ RLWVSS DY  D
Sbjct: 574 RGQAPYKFLLSHGFVMDGEGKKMSK--SLGNV-IVPDQVVKQKGADIARLWVSSTDYLAD 630

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVK 653
           V I  ++L+Q SD+YRK+R TLR++LGN+ D+    +SI+  +L  +D+Y L +L     
Sbjct: 631 VRISDEILKQTSDVYRKIRNTLRFMLGNVSDFNPETDSIAEAELLEVDRYLLHRLREFTA 690

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
           +   +YE++ +  I+Q +Q FI V+LSNFY D  KD LY    +S  RRS QTVL   L+
Sbjct: 691 STINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEERSSHKRRSMQTVLYQILV 750

Query: 714 SIVRVIAPILPHLAEDVWQNLPF----AYTLEDGSAAEFVFESKWPVLDEKWRTF 764
            + +++APIL H AE+VW + P     +  L D    E V +     L +KW TF
Sbjct: 751 DMTKLLAPILVHTAEEVWSHTPHVKEESVHLADMPKVEEVDQQ----LLDKWNTF 801


>gi|340355067|ref|ZP_08677760.1| isoleucine--tRNA ligase [Sporosarcina newyorkensis 2681]
 gi|339622748|gb|EGQ27262.1| isoleucine--tRNA ligase [Sporosarcina newyorkensis 2681]
          Length = 919

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 206/469 (43%), Positives = 287/469 (61%), Gaps = 43/469 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF-VLHDGPPYANGN 164
           YK T+ +PKT F MR N    EP++ + WD+  ++ +V ++  G  F VLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTEFPMRGNLPNNEPKMQEKWDEENIYQKVQERTAGRPFFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPSK 223
           LHMGHALNK+LKDII RYK +  +   YVPGWD HGLPIE  ++ + +D   +K ++ ++
Sbjct: 63  LHMGHALNKVLKDIIVRYKSMSGFHAPYVPGWDTHGLPIEQALVNKGVD---RKKMSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   +  Q   FKR GV  DW NPY+TL PE+E+ QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKMCEDYAYEQINNQRTQFKRLGVRGDWENPYITLKPEFESRQIQVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L E   D+   +WT
Sbjct: 180 LKPVYWSPSSESALAEAEIEYKDKK-SPSIYVSFPVRDG----KGVLAE---DVKFLIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++V+    YAVV +     G+                      ++VA +
Sbjct: 232 TTPWTIPANLGISVHPAFTYAVVNVN----GEK---------------------LVVAKE 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           LV  L  E +W     I++ L G+DL+     HP  +R   +++ G+++T ++GTG VHT
Sbjct: 267 LVEFLAKELEW-ENYSIEQELPGADLDRIVAKHPFYDRDSLIML-GEHVTADAGTGCVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++D+  S  YG+  LSP++D G  TEEA  F+G+    D N AV + L+E  +L 
Sbjct: 325 APGHGEDDFYVSKSYGIDALSPINDRGVMTEEAPYFAGM-FYEDANKAVTEKLEEVGALK 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                 H YP+DWRTKKP IFRAT QWFAS+E FR   ++AI   K+ P
Sbjct: 384 KLSFITHSYPHDWRTKKPVIFRATAQWFASIELFRSDLLEAIRNTKFTP 432



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/167 (39%), Positives = 111/167 (66%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GAD++RLWVSSVDYT DV +     +Q+S++YRK+R T+R+L GN+ D+  
Sbjct: 603 VPAKVINQLGADIVRLWVSSVDYTADVRVSDSNFKQVSEVYRKIRNTIRFLHGNVADFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + +S++++  +DQY   +L++++K +R +Y+ Y+F  ++  +  F    LS+FY D+A
Sbjct: 663 SADRVSFEEMRPVDQYVYVKLQDLIKEVRTAYDHYEFAGVYHAVNNFCTGVLSSFYLDIA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y  G     RR+ QTV+   L+++V++I PILPH A+++W  L
Sbjct: 723 KDVVYIEGVNHPHRRAMQTVMYDTLITLVKLITPILPHTADEMWNYL 769


>gi|392531410|ref|ZP_10278547.1| isoleucyl-tRNA ligase [Carnobacterium maltaromaticum ATCC 35586]
          Length = 927

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/467 (43%), Positives = 288/467 (61%), Gaps = 39/467 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L +T F MR N  VRE +    W    ++ +    N+G+  FVLHDGPP+ANG
Sbjct: 2   KMKETLQLGQTEFPMRGNLPVREEQWQADWKTVDMYGQRQKLNEGKPTFVLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  Y+  YVPGWD HGLPIE +VL +     +K+++ + 
Sbjct: 62  NIHMGHALNKISKDIIVRYKSMSGYRSPYVPGWDTHGLPIE-QVLTN-KGIKRKEMSLAD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   FKR GV  +W+NPY+TL+P+YEAAQI VFG+M+ +GYIY+G
Sbjct: 120 YRRLCEEYALEQVNIQREDFKRLGVAGEWDNPYITLNPDYEAAQIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F++V       GLL+    D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SASIYVAFKVVDG----KGLLDN---DTSFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VNA   Y V+      E D A                     +VA D
Sbjct: 232 TTPWTIPANLGITVNADYSYVVI------EADGAK-------------------FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  + ++ G   + +   L GS+LE     HP+  R   +++ GD++T ++GTGLVHTA
Sbjct: 267 LLEKVSSEIGWENVTVLNELKGSELEYMTAQHPLYERTSLLMV-GDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG +D++   KY L +LSPVD +G FT+EA  F G+     GN  + + L+E+ +L+ 
Sbjct: 326 PGHGDDDFIVGQKYKLNVLSPVDSKGVFTDEAPGFEGV-FYDKGNKLITEALNEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
            + + H YP+DWR+KKP IFRAT QWFAS++ FR   ++A+  V+WV
Sbjct: 385 LDFFTHSYPHDWRSKKPVIFRATPQWFASIQDFRGEILEAVEGVEWV 431



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 107/167 (64%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           +P +     GAD++RLWVSSVD   DV +  ++L+Q+S++YRK+R T+R+LL N  D++ 
Sbjct: 603 LPSKVIKQMGADIIRLWVSSVDAQSDVRVSDEILKQVSEVYRKIRNTMRFLLANTSDFKP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + I YDDL  +D+Y L +L  +V  + E+YE+Y F   +Q+I  F  VDLS FY D A
Sbjct: 663 AEHGIKYDDLRSVDKYLLIRLNQLVGAVEENYENYDFSSNYQLINNFCTVDLSQFYLDFA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     ++ RR+ QTV    L  + +++ PILPH AE++W  L
Sbjct: 723 KDVVYIEAENAYERRAMQTVFYDVLEKMTKLLTPILPHTAEEIWNFL 769


>gi|414083302|ref|YP_006992010.1| isoleucyl-tRNA synthetase [Carnobacterium maltaromaticum LMA28]
 gi|412996886|emb|CCO10695.1| isoleucyl-tRNA synthetase [Carnobacterium maltaromaticum LMA28]
          Length = 749

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/467 (43%), Positives = 288/467 (61%), Gaps = 39/467 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L +T F MR N  VRE +    W    ++ +    N+G+  FVLHDGPP+ANG
Sbjct: 2   KMKETLQLGQTEFPMRGNLPVREEQWQADWKTVDMYGQRQKLNEGKPTFVLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  Y+  YVPGWD HGLPIE +VL +     +K+++ + 
Sbjct: 62  NIHMGHALNKISKDIIVRYKSMSGYRSPYVPGWDTHGLPIE-QVLTN-KGIKRKEMSLAD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   FKR GV  +W+NPY+TL+P+YEAAQI VFG+M+ +GYIY+G
Sbjct: 120 YRRLCEEYALEQVNIQREDFKRLGVAGEWDNPYITLNPDYEAAQIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F++V       GLL+    D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDVK-SASIYVAFKVVDG----KGLLDN---DTSFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VNA   Y V+      E D A                     +VA D
Sbjct: 232 TTPWTIPANLGITVNADYSYVVI------EADGAK-------------------FVVAKD 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  + ++ G   + +   L GS+LE     HP+  R   +++ GD++T ++GTGLVHTA
Sbjct: 267 LLEKVSSEIGWENVTVLNELKGSELEYMTAQHPLYERTSLLMV-GDHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG +D++   KY L +LSPVD +G FT+EA  F G+     GN  + + L+E+ +L+ 
Sbjct: 326 PGHGDDDFIVGQKYKLNVLSPVDSKGVFTDEAPGFEGV-FYDKGNKLITEALNEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
            + + H YP+DWR+KKP IFRAT QWFAS++ FR   ++A+  V+WV
Sbjct: 385 LDFFTHSYPHDWRSKKPVIFRATPQWFASIQDFRGEILEAVEGVEWV 431



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 91/141 (64%), Gaps = 1/141 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           +P +     GAD++RLWVSSVD   DV +  ++L+Q+S++YRK+R T+R+LL N  D++ 
Sbjct: 603 LPSKVIKQMGADIIRLWVSSVDAQSDVRVSDEILKQVSEVYRKIRNTMRFLLANTSDFKP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + I YDDL  +D+Y L +L  +V  + E+YE+Y F   +Q+I  F  VDLS FY D A
Sbjct: 663 AEHGIKYDDLRSVDKYLLIRLNQLVGAVEENYENYDFSSNYQLINNFCTVDLSQFYLDFA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVL 708
           KD +Y     ++ RR+ QTV 
Sbjct: 723 KDVVYIEAENAYERRAMQTVF 743


>gi|258514376|ref|YP_003190598.1| isoleucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257778081|gb|ACV61975.1| isoleucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 927

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/466 (43%), Positives = 287/466 (61%), Gaps = 36/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  T++LP+T F MRAN   REPEI K W +  ++  V +KN+G+  F+LHDGPPYANG+
Sbjct: 3   YGKTINLPQTDFPMRANLPNREPEILKYWTEKNIYRAVQEKNEGKPKFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH LNKILKDII +YK +  Y   YVPGWD HGLPIE + +++L  + + ++     
Sbjct: 63  IHLGHTLNKILKDIIVKYKSMTGYDAPYVPGWDTHGLPIEQQAIKALGIN-RHEVDTVVF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V  Q   F R GV ADW+  Y+TL P +EA QI VFG+M+ +GYIY+G 
Sbjct: 122 RNKCKEYALKFVGIQKEEFIRLGVRADWDRSYVTLMPHFEARQIGVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W  S  TALAEAE+EY +   S SIY  F +      + GL      +  L +WTT
Sbjct: 182 KPVYWCASCETALAEAEVEYQDKK-SPSIYVRFPVA----DSKGLFPS--ENTYLVIWTT 234

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P N A++++ +  Y +V+I                          +V  IVA +L
Sbjct: 235 TPWTIPGNVAISLHPEYFYVLVQI-------------------------GEVKYIVAKEL 269

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           + +     G +  + +  AG++LE     HP+ +R   +VI G+++T E GTG VHTAPG
Sbjct: 270 LASFLELLGAQGTVLQEFAGAELERVVCRHPLLDRD-SLVILGEHVTLEQGTGCVHTAPG 328

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HGQED+  + KYGLP++SPV+ +G FT+E G FSG   L   N +V+  L E+  L+ + 
Sbjct: 329 HGQEDFEAAKKYGLPVISPVNGKGVFTDEGGIFSGQFYL-KANQSVLDALTERGHLLFQA 387

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             +H+YP+ WR K    FRATEQWFAS+EGFR+ A++ I +V+WVP
Sbjct: 388 EIDHQYPHCWRCKSSIFFRATEQWFASIEGFRRQALEEIRKVQWVP 433



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 106/159 (66%), Gaps = 1/159 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSS DY  D+ +   +L+Q+S+ YRK+R T R+LL N++D+    + ++Y+ 
Sbjct: 617 GADILRLWVSSADYKSDLAVSQNILKQLSEAYRKIRNTCRFLLSNIYDFDPSADQVAYEK 676

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +D++AL +L  +++ +  +Y  Y+F  ++  I  F  VD+SN Y D+ KDRLYT   
Sbjct: 677 MVELDRWALLKLHRLIEKVLNAYHDYEFHVVYHAIHNFCTVDMSNRYLDIIKDRLYTSPA 736

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
            S  RR+ QTVL   L ++VR++ P+L   +E++W+++P
Sbjct: 737 ESPDRRAAQTVLYLILDALVRLLTPVLAFTSEEIWKHMP 775


>gi|227517926|ref|ZP_03947975.1| possible isoleucyl-tRNA synthetase, partial [Enterococcus faecalis
           TX0104]
 gi|227074680|gb|EEI12643.1| possible isoleucyl-tRNA synthetase [Enterococcus faecalis TX0104]
          Length = 533

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/469 (43%), Positives = 294/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++  ++ +    N+G+  FVLHDGPPYANG
Sbjct: 9   KMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K++T ++
Sbjct: 69  NIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIE-QVLTNKGV-KRKEMTVAE 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR GV  DW +PY+TLDPEYEAA+I VFG+M+ +GYIY+G
Sbjct: 127 YREKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F +V       GLL+    +    +WT
Sbjct: 187 LKPIYWSPSSESSLAEAEIEYKDVK-SPSIYVAFNVVDG----KGLLDN---ETAFVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++VN    Y  VE+++                     D +K   ++A D
Sbjct: 239 TTPWTLPANLGISVNPDFTY--VEVKA---------------------DGRK--FVIAKD 273

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T++   G + V + +  +G  L+     HP  +R   V++ GD++T ++GTGLVHTA
Sbjct: 274 LLSTVKEAIGWEEVEVLREFSGEKLDRMTAQHPFYDRTSLVML-GDHVTLDAGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY+ S KY LP++SPVD  G FT+EA  F G+      N  + + L+E+ +L+ 
Sbjct: 333 PGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGFEGI-FYDKANPMITELLEEKGALLK 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP I+RAT QWFAS+  FRQ  +D + +V W+ P
Sbjct: 392 LDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQDILDEVEKVDWLIP 440


>gi|317059145|ref|ZP_07923630.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684821|gb|EFS21656.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 931

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/472 (43%), Positives = 283/472 (59%), Gaps = 38/472 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYAN 162
           E  Y  T+ LPKT F M+ N   +EP   K W+D++++ +   K   E+F+LHDGPPYAN
Sbjct: 3   EKDYAETLHLPKTNFQMKGNLPNKEPNYIKKWEDNKIYEKGLAKGK-ESFILHDGPPYAN 61

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           GN H+GHALNKILKDII +YK LQ YK  Y+PGWD HGLPIELKV++ L   A KD+T  
Sbjct: 62  GNTHIGHALNKILKDIIIKYKTLQGYKAPYIPGWDTHGLPIELKVMEKLGSKA-KDMTAL 120

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           ++R    ++A   V  Q   F R GV   W +PYLTL P++EA Q+++FG++   GYI++
Sbjct: 121 EIRQLCKEYALKWVDIQREEFIRMGVIGKWEDPYLTLKPQFEAKQLQIFGELYANGYIFK 180

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KP++WSP + TALAEAE+EY + H S SIY   +  S       L  E      + +W
Sbjct: 181 GLKPIYWSPVTETALAEAEIEYHD-HTSPSIYVRMKANSDLLEKISLTEEAY----VVIW 235

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+++N    Y V                 K+  GN         +I+  
Sbjct: 236 TTTPWTLPANVAISLNPDFDYGVY----------------KTEKGN---------LILGK 270

Query: 403 DLVPTLEAKWGTKL-VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           DL  T  A+ G +   + K   GS LE   Y HP  +R   +++ G ++T ++GTG VHT
Sbjct: 271 DLAETAFAEMGIENPELVKEFKGSTLEMTSYQHPFLDRTGYIIL-GTHVTADAGTGCVHT 329

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSL 520
           APGHGQEDYV   +Y +PI+SP++ +G  TEEAG  F+GL      N A++ +L E   L
Sbjct: 330 APGHGQEDYVVGCRYNMPIVSPINYKGYLTEEAGPLFAGL-FYEKANKAIIDHLTETGFL 388

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
           +  +   H YP+DWR+K P IFRATEQWF   EG   R+ A+ A+  V+++P
Sbjct: 389 LKMKEITHSYPHDWRSKTPVIFRATEQWFVKAEGSDLREKALRALDDVEFIP 440



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 90/210 (42%), Positives = 134/210 (63%), Gaps = 8/210 (3%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    YGAD+LRLW +SVDY  DV I   +++QM++ YR++R T RY+LGN + +   
Sbjct: 614 PEKIIKQYGADILRLWCASVDYREDVKISDNIVKQMAETYRRVRNTARYILGNSYGFDPK 673

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            +++ Y DL  ID++AL +LE + K++ ESYE Y+F+ +FQ I  F  +D+S FY D+ K
Sbjct: 674 KDAVPYQDLLEIDKWALHKLEMLKKSVGESYEKYEFYNVFQEIHYFAGIDMSAFYLDIIK 733

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 748
           DRLYT    S  RRS QTV+   L+++V++IAPIL   AE++W++LP   TL D    E 
Sbjct: 734 DRLYTEKEDSIARRSAQTVMIEILMTLVKMIAPILSFTAEEIWEHLP--ETLRD---QES 788

Query: 749 VFESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           V  + W V+ E++    + E   W KI +V
Sbjct: 789 VLLTDWYVMKEEYINEEIAEK--WSKIQKV 816


>gi|373114060|ref|ZP_09528277.1| isoleucyl-tRNA synthetase [Fusobacterium necrophorum subsp.
           funduliforme 1_1_36S]
 gi|371652947|gb|EHO18353.1| isoleucyl-tRNA synthetase [Fusobacterium necrophorum subsp.
           funduliforme 1_1_36S]
          Length = 486

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 204/474 (43%), Positives = 291/474 (61%), Gaps = 42/474 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYAN 162
           E  Y  T+ LPKT+F M+ N   +EP   K W++H+++ +   K   E+F+LHDGPPYAN
Sbjct: 3   EKDYAETLHLPKTSFQMKGNLPNKEPNYIKKWEEHKIYEKGLAKGK-ESFILHDGPPYAN 61

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           GN H+GHALNKILKDII +YK LQ YK  Y+PGWD HGLPIELKV++ L   A KD+T  
Sbjct: 62  GNTHIGHALNKILKDIIIKYKTLQGYKAPYIPGWDTHGLPIELKVMEKLGSKA-KDMTAL 120

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           ++R    ++A   V  Q   F R GV   W +PYLTL P++EA Q+++FG++   GYI++
Sbjct: 121 EIRKLCKEYALRWVDIQREEFIRMGVIGKWEDPYLTLKPQFEAKQLQIFGELYANGYIFK 180

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE--FLPDLGLA 340
           G KP++WSP + TALAEAE+EY + H S SIY   +      + + LL +  F  +  + 
Sbjct: 181 GLKPIYWSPVTETALAEAEIEYHD-HTSPSIYVKMK------ANADLLEKISFSEEAYVV 233

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN A+++N + +Y V                 K+  GN         +I+
Sbjct: 234 IWTTTPWTLPANVAISLNPEFEYGVY----------------KTEKGN---------LIL 268

Query: 401 ASDLVPTLEAKWGTKL-VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
             +L  T  A+ G +   + K   GS LE   Y HP  +R   +++ G ++T ++GTG V
Sbjct: 269 GKELAETAFAEMGIEAPELLKEFKGSVLEMTSYQHPFLDRTGYIIL-GTHVTADAGTGCV 327

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQM 518
           HTAPGHGQEDYV   +Y +PI+SP++ +G  TEEAG  F+GL      N  ++++L E  
Sbjct: 328 HTAPGHGQEDYVVGCRYNMPIVSPINYKGYLTEEAGPLFAGL-FYEKANKTIIEHLTEIG 386

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
            L+  +   H YP+DWR+K P IFRATEQWF   EG   R+ A+ A+ +V+++P
Sbjct: 387 LLLKMKEITHSYPHDWRSKTPVIFRATEQWFVKAEGSDLREKALKALDEVEFIP 440


>gi|379727685|ref|YP_005319870.1| isoleucyl-tRNA synthetase [Melissococcus plutonius DAT561]
 gi|376318588|dbj|BAL62375.1| isoleucyl-tRNA synthetase [Melissococcus plutonius DAT561]
          Length = 928

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 207/470 (44%), Positives = 286/470 (60%), Gaps = 41/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ L KT F MR N   RE E  K W++ +++ +    N+G+ +FVLHDGPP+ANG
Sbjct: 2   KIKDTLQLGKTAFPMRGNLPTREVEWQKEWEEKKLYEKRQQLNEGKPSFVLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHALNKI KDII R K +  ++  YVPGWD HGLPIE +VL +     +K+L+ ++
Sbjct: 62  NIHLGHALNKISKDIIVRAKAMSGFRSPYVPGWDTHGLPIE-QVLANKGV-KRKELSLAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A + V  Q   FKR G+  DW +PYLTLDP YEAA++ VFG+M+  GYIY+G
Sbjct: 120 YREKCKEYALSQVDKQREDFKRLGISGDWQHPYLTLDPVYEAAEVRVFGKMAELGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F++V       GLL+    D    +WT
Sbjct: 180 LKPIYWSPSSESSLAEAEIEYKDIK-SPSIYVAFKVVDG----KGLLD---TDTSFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN    Y  +++                         KK   +VA D
Sbjct: 232 TTPWTLPANEGIAVNPDFDYVAIDVNG-----------------------KKY--VVAKD 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+ T+     W    +I KT  G +LE     HP   R   VV+ GD++T ++GTGLVHT
Sbjct: 267 LLSTVVDTIGWENPRII-KTFKGKELECMTAQHPFYERTSLVVL-GDHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY+   +Y L ILSP+D  G  T+EA  F G+      N  V + L E+ +L+
Sbjct: 325 APGHGEDDYLVGKQYNLEILSPIDSRGMLTKEAPGFEGV-FYDKANPMVTELLKEKGTLL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
             + + H YP+DWRTKKP I+RAT QWFAS++ FRQ  ++ I  V W+ P
Sbjct: 384 KLDFFTHSYPHDWRTKKPVIYRATPQWFASIDKFRQDILNNIKTVDWIIP 433



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 108/166 (65%), Gaps = 2/166 (1%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           +P +     GAD+LRLWV SVDY  DV +   +L+Q+++IYRK+R T+R+LL N  D+  
Sbjct: 603 LPEKVIKQLGADILRLWVISVDYEADVRVSMDILKQVAEIYRKIRNTMRFLLANTDDFDP 662

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRES-YESYQFFKIFQIIQRFIIVDLSNFYFDV 686
             N + Y++L  +D+Y + +L  ++K IRE  YE Y F +I++ I  F+ VDLS+FY D 
Sbjct: 663 NENKVHYNELRSVDKYMMIRLNQVIKEIREEGYEKYNFLRIYRQITNFLTVDLSSFYLDF 722

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQ 732
           AKD +Y     ++ RR  QTV     ++I ++++PILP  AE++WQ
Sbjct: 723 AKDVVYIEAENNYQRRCMQTVFYQIAVTITKLLSPILPFTAEEIWQ 768


>gi|312143927|ref|YP_003995373.1| isoleucyl-tRNA synthetase [Halanaerobium hydrogeniformans]
 gi|311904578|gb|ADQ15019.1| isoleucyl-tRNA synthetase [Halanaerobium hydrogeniformans]
          Length = 931

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/470 (42%), Positives = 282/470 (60%), Gaps = 36/470 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T++LP T F MRAN   RE +  K+W+++ ++ +     +G E+F+LHDGPPYANG+
Sbjct: 3   YKDTINLPNTEFPMRANLSERELDFQKVWEENNIYEKAIKNREGKESFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKD + R+  L+ Y   YVPGWD HGLPIE +V   + +  ++DL+  +L
Sbjct: 63  IHIGHALNKILKDFVTRFATLKGYYSPYVPGWDTHGLPIEHQVTSEMSDQERQDLSVEEL 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   +A   +  Q   FKR GVW +W++PYLTL PEYE  QIEVFG+M+  G  YRGK
Sbjct: 123 REKCTNYALKYIDRQREQFKRLGVWGEWDDPYLTLSPEYEVKQIEVFGEMAKNGLFYRGK 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-LAVWT 343
           KPVHW P   TALAEAE+EY E     SIY  F +          LN+   D G + +WT
Sbjct: 183 KPVHWCPHCETALAEAEVEYGEDRAP-SIYVKFPLKDEFEVGGVSLNK---DNGYVVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P+N A+A +    Y VVE Q    G+                      +I+A +
Sbjct: 239 TTPWTIPSNMAIAFHPDYPYVVVEAQ----GEK---------------------LIMAKE 273

Query: 404 LVPTLEAKWGTK--LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           LV ++    G K   +I +  +  +LEN +  HP  +R   ++I GD++T E GTG VHT
Sbjct: 274 LVSSVMEISGIKDYEIISEDFSAKELENKKCRHPFVDRD-SLLILGDHVTLEQGTGCVHT 332

Query: 462 APGHGQEDYVTSLK-YGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           APGHG +D+V   + YGL + +P+D+ G FTE+AG F+G     + N+ V   L E+  L
Sbjct: 333 APGHGHDDFVVGHQEYGLEVYAPMDNRGYFTEKAGDFAGKST-DEVNIMVTDKLKEKNLL 391

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +     +H+YP+ WR K   +FRAT+QWFAS++  +   + AI +V+W P
Sbjct: 392 MDLSFIDHQYPHCWRCKGNLLFRATDQWFASIDAIKDKTLKAISEVEWHP 441



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 127/193 (65%), Gaps = 6/193 (3%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV- 628
           P +    YGAD+LRLWV+S D+  DV +   +L+Q S++YR++R T R++LGN+ D+ + 
Sbjct: 614 PHKVIDQYGADILRLWVASSDFKNDVKVSDNILKQNSEVYRRIRNTYRFVLGNVSDFDIE 673

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            N I Y+D   +D++ + +L++++K + ++YE Y++ +++  +  F  V++S+ Y D+ K
Sbjct: 674 KNYIKYEDRKELDRWIMIRLQDLIKKVTKAYEKYEYHRVYHDVHNFCTVEMSSLYMDITK 733

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 748
           DRLYT GT S +RRS Q+ L   ++++V ++AP+LPH +E+VWQ L      +   A E 
Sbjct: 734 DRLYTDGTDSLSRRSAQSTLYDIMMALVVMLAPLLPHTSEEVWQFLG-----DKVKAKES 788

Query: 749 VFESKWPVLDEKW 761
           VF S WP L E +
Sbjct: 789 VFLSDWPELREDY 801


>gi|347534665|ref|YP_004841335.1| Isoleucyl-tRNA synthetase [Lactobacillus sanfranciscensis TMW
           1.1304]
 gi|345504721|gb|AEN99403.1| Isoleucyl-tRNA synthetase [Lactobacillus sanfranciscensis TMW
           1.1304]
          Length = 956

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 208/469 (44%), Positives = 293/469 (62%), Gaps = 36/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E E  KLW+D+Q++ +    N+G+ +FVLHDGPPYANG
Sbjct: 25  RIKDTLNLGKTKFKMRGNLPVKELEREKLWEDNQLYQQRQKLNEGKPSFVLHDGPPYANG 84

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHA+NKI KD I RYK +  ++  +VPGWD HGLPIE + L+    D KK ++ ++
Sbjct: 85  DIHMGHAMNKITKDFIVRYKSMNGFRAPFVPGWDTHGLPIEQQ-LKKAGYDRKK-MSTNE 142

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   V  Q   FKR G+  DW+NPYLTL PE+EAA++ VFG+M+ +G IY+G
Sbjct: 143 FRKLCHDYALKQVNRQRTEFKRLGLQGDWDNPYLTLMPEFEAAEVRVFGKMAEKGLIYKG 202

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV WS SS +ALAEAE+EY +     + +A  ++V       G+L+    D  + VWT
Sbjct: 203 LKPVIWSWSSESALAEAEVEYHDVESPSAFFAE-KVVDG----KGVLD--TDDTYMVVWT 255

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + ++A   YAVV+                        D KK   ++ ++
Sbjct: 256 TTPWTIPASEGITISADFDYAVVQHDD---------------------DPKKY--VLDTE 292

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+      +G K V + KT+ G++LEN    HP D+ +  V + GD++T ++GTGLVHTA
Sbjct: 293 LLDKDAEMFGWKNVKVLKTVKGAELENVLAEHPFDSSKKLVTMLGDFVTNDAGTGLVHTA 352

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++DY+   +YGLPI +PVD++G  T+EAG  F+G+    D N   +  L EQ  L+
Sbjct: 353 PGYGEDDYIIGKQYGLPIFAPVDNKGYLTKEAGPDFAGV-FYEDANQIALDKLKEQGQLV 411

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              PY+H YP+DWRTKKP I+RAT QWFASV   RQ  +DAI  V + P
Sbjct: 412 YYMPYKHSYPFDWRTKKPVIYRATPQWFASVSKIRQNILDAIDTVNFNP 460



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 105/165 (63%), Gaps = 2/165 (1%)

Query: 569 VPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 627
           + P+E     GAD++RLWV+SVD + DV +     + + D Y+K+R T+RYLL N  D+ 
Sbjct: 630 IAPEEVIKQMGADIIRLWVTSVDTSADVRVSMGNFKTVGDSYKKIRNTVRYLLANTSDFD 689

Query: 628 -VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
              +SISYD+L  +DQY L +L ++++N+++SY++Y F  I + I  F+  +LS FY D 
Sbjct: 690 PEKDSISYDELTSVDQYMLVKLNHLIENVKKSYDNYDFMAINKEIMTFLTANLSAFYLDF 749

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
           AKD LY        RR  QTV+   L+++ +++ PILPH  E++W
Sbjct: 750 AKDILYIDAENDKRRRGMQTVMYEALVALTKLLTPILPHTTEEIW 794


>gi|315917619|ref|ZP_07913859.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691494|gb|EFS28329.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 931

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/472 (43%), Positives = 283/472 (59%), Gaps = 38/472 (8%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYAN 162
           E  Y  T+ LPKT F M+ N   +EP   K W+D++++ +   K   E+F+LHDGPPYAN
Sbjct: 3   EKDYAETLHLPKTNFQMKGNLPNKEPNYIKKWEDNKIYEKGLAKGK-ESFILHDGPPYAN 61

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           GN H+GHALNKILKDII +YK LQ YK  Y+PGWD HGLPIELKV++ L   A KD+T  
Sbjct: 62  GNTHIGHALNKILKDIIIKYKTLQGYKAPYIPGWDTHGLPIELKVMEKLGSKA-KDMTAL 120

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           ++R    ++A   V  Q   F R GV   W +PYLTL P++EA Q+++FG++   GYI++
Sbjct: 121 EIRQLCKEYALKWVDIQREEFIRMGVIGKWEDPYLTLKPQFEAKQLQIFGELYANGYIFK 180

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KP++WSP + TALAEAE+EY + H S SIY   +  S       L  E      + +W
Sbjct: 181 GLKPIYWSPVTETALAEAEIEYHD-HTSPSIYVRMKANSDLLEKISLSEEAY----VVIW 235

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+++N    Y V                 K+  GN         +I+  
Sbjct: 236 TTTPWTLPANVAISLNPDFDYGVY----------------KTEKGN---------LILGK 270

Query: 403 DLVPTLEAKWGTKL-VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           DL  T  A+ G +   + K   GS LE   Y HP  +R   +++ G ++T ++GTG VHT
Sbjct: 271 DLADTAFAEMGIENPELVKEFKGSTLEMTSYQHPFLDRTGYIIL-GTHVTADAGTGCVHT 329

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSL 520
           APGHGQEDYV   +Y +PI+SP++ +G  TEEAG  F+GL      N A++ +L E   L
Sbjct: 330 APGHGQEDYVVGCRYNMPIVSPINYKGYLTEEAGPLFAGL-FYEKANKAIIDHLTETGFL 388

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
           +  +   H YP+DWR+K P IFRATEQWF   EG   R+ A+ A+  V+++P
Sbjct: 389 LKMKEITHSYPHDWRSKTPVIFRATEQWFVKAEGSDLREKALRALDDVEFIP 440



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 90/210 (42%), Positives = 134/210 (63%), Gaps = 8/210 (3%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    YGAD+LRLW +SVDY  DV I   +++QM++ YR++R T RY+LGN + +   
Sbjct: 614 PEKIIKQYGADILRLWCASVDYREDVKISDNIVKQMAETYRRVRNTARYILGNSYGFDPK 673

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            +++ Y DL  ID++AL +LE + K++ ESYE Y+F+ +FQ I  F  +D+S FY D+ K
Sbjct: 674 KDAVPYQDLLEIDKWALHKLEMLKKSVGESYEKYEFYNVFQEIHYFAGIDMSAFYLDIIK 733

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 748
           DRLYT    S  RRS QTV+   L+++V++IAPIL   AE++W++LP   TL D    E 
Sbjct: 734 DRLYTEKEDSIARRSAQTVMIEILMTLVKMIAPILSFTAEEIWEHLP--ETLRD---QES 788

Query: 749 VFESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           V  + W V+ E++    + E   W KI +V
Sbjct: 789 VLLTDWYVMKEEYINEEIAEK--WSKIQKV 816


>gi|336113716|ref|YP_004568483.1| isoleucyl-tRNA synthetase [Bacillus coagulans 2-6]
 gi|335367146|gb|AEH53097.1| isoleucyl-tRNA synthetase [Bacillus coagulans 2-6]
          Length = 922

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 203/466 (43%), Positives = 284/466 (60%), Gaps = 37/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N   +EP+I   W++  ++ +V  + +G   FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGNLPKKEPKIQAKWEEMDIYQKVMKRTEGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNK LKDIINR+K +  Y   YVPGWD HGLPIE ++ +   +  +K ++ ++ 
Sbjct: 63  LHMGHALNKTLKDIINRFKSMTGYHAPYVPGWDTHGLPIEQELTKKGVD--RKSMSVAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    K+A   +  Q  +FKR GV  DW NPYLTL P YEA QI+VFG+M+ +GYIY+G 
Sbjct: 121 RKLCEKYAHEQIDRQRTAFKRLGVRGDWENPYLTLRPAYEAEQIKVFGEMAKKGYIYKGL 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALA+AE+EY +   S SIY  F +        G+L+    D  + +WTT
Sbjct: 181 KPVYWSPSSESALADAEIEYKDIK-SPSIYVAFDVKDG----KGVLD---TDTKIVIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N  +AVN ++ Y VV+             NK      +L++   V        
Sbjct: 233 TPWTIPSNLGIAVNPEINYVVVK----------TGGNKYLVAEALLEEVSSVL------- 275

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
                 +W    V+ +T+ G  LE     HP+  R   V++ GD++TT+SGTG VHT+PG
Sbjct: 276 ------EWENAEVV-QTVPGKKLEYIVAKHPLYGRDSLVML-GDHVTTDSGTGCVHTSPG 327

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++D++   KYGL ++  VDD+G  T++A  F GL      N  + + LD+  +L+  +
Sbjct: 328 HGEDDFLIGKKYGLDVICAVDDKGMMTKDAPGFEGL-FYDKANKPICEALDQAGALLKLK 386

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              H YP+DWRTKKP IFRAT QWFASV+ FR   + A+ +V W P
Sbjct: 387 FLTHSYPHDWRTKKPVIFRATSQWFASVDMFRDDILKAVEEVNWTP 432



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 78/199 (39%), Positives = 128/199 (64%), Gaps = 3/199 (1%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           +P +     GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T R++LGNL+D+  
Sbjct: 603 LPGKVVEQLGADIIRLWVASVDYQADVRVSNEILKQVSEVYRKIRNTFRFMLGNLNDFDP 662

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + ++Y++L  +D++ L +L  +VK +RE+YE Y+F  I+  +  F   DLS+FY D A
Sbjct: 663 ARHQVAYEELREVDRFMLVKLNKLVKEVREAYERYEFATIYHAVNNFCATDLSSFYMDFA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAY--TLEDGSA 745
           KD LY     +  RR+ QTVL   L+++ ++++PILPH A++VWQ +P     +++    
Sbjct: 723 KDVLYIELADNPERRAMQTVLYECLVALTKLLSPILPHTADEVWQYIPGVTEESVQLTDM 782

Query: 746 AEFVFESKWPVLDEKWRTF 764
            E+V       L+EKW  F
Sbjct: 783 PEYVDLPDASALEEKWNAF 801


>gi|256846981|ref|ZP_05552427.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715645|gb|EEU30620.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 931

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/469 (44%), Positives = 299/469 (63%), Gaps = 38/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR +    E +  KLW++++V+ +    N+G+  FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFPMRGHLPETEGQREKLWEENKVYEQRQKLNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHA+NKI KD I RYK +  Y+  YVPGWD HGLPIE ++ +S  +  +K ++ ++
Sbjct: 62  NIHIGHAMNKISKDFIVRYKSMTGYRAPYVPGWDTHGLPIEHQLTKSGYD--RKKMSTAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    K+A   V+ QMA FKR GV  DW++PYLTLD E+EAAQI+VFG  + +G +Y+ 
Sbjct: 120 FRDLCRKYALEQVQKQMAGFKRLGVSGDWDHPYLTLDKEFEAAQIKVFGDFAKKGLLYQA 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY +     + +A            G+L+    D  L VWT
Sbjct: 180 KKPVYWSWSSESALAEAEVEYHDVVAKTAFFA-----EQVKDGKGVLDN---DTYLVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWTVPA+ AVA+N   +YAVV+           PAN          D +K F++ +S 
Sbjct: 232 TTPWTVPASEAVAINPDFEYAVVK-----------PAN----------DDRK-FVVASSR 269

Query: 404 LVPTLEA-KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L    +   WG+  V+ KT+ G +LE     HP  +R+  V + GDY+T ++GTGLVHTA
Sbjct: 270 LAEIADKLDWGSYEVV-KTVKGQELEYVTTQHPYLDRELLVGL-GDYVTDDTGTGLVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G +DY    KY LPIL+P++D+G  T E G +F G+      +V+ +K L+E+ +L+
Sbjct: 328 PGYGDDDYWFGKKYDLPILAPMNDQGVLTAENGPEFDGVFYQKADDVS-LKLLEEKNALL 386

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +EEP +H YP+DWRTK+P +FRAT+QWF S++  R   + A+ +VK+ P
Sbjct: 387 LEEPLKHSYPFDWRTKQPIVFRATDQWFVSIDKMRDEILKAVDEVKYFP 435



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 111/200 (55%), Gaps = 8/200 (4%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +     GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D+   
Sbjct: 607 PAKVVQQMGAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFDAD 666

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            N++SY+ L  +DQY L +    +  +R+ +++Y F   ++++  F+  DLS FY +VAK
Sbjct: 667 ENTVSYEKLTSVDQYMLVKFNQFLAKMRDEFDAYDFLDGYKLLINFVNNDLSAFYMNVAK 726

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW--QNLP--FAYTLEDGS 744
           D LY     S  RRS QTV    L+ +V+++ PILPH  E+VW   N P  F    E   
Sbjct: 727 DVLYIQPANSLERRSMQTVFYQILVGLVKLLTPILPHTTEEVWGYMNEPEEFVQLTEIPE 786

Query: 745 AAEFVFESKWPVLDEKWRTF 764
           A  F  E +   L E+W  F
Sbjct: 787 ARHFTNEEQ---LLEQWNQF 803


>gi|336323063|ref|YP_004603030.1| isoleucyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
 gi|336106644|gb|AEI14462.1| Isoleucyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
          Length = 933

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/469 (44%), Positives = 285/469 (60%), Gaps = 27/469 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T++LPKT F M+A+   +EP+  K W D +++ R+ +K  G E +VLHDGPPYANG+
Sbjct: 3   YKDTLNLPKTGFPMKASLANKEPQRLKAWYDKELYQRILEKRQGAEKYVLHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD + R K  Q Y   YVPGWDCHGLPIE +V + L    KK+++ S +
Sbjct: 63  LHMGHALNKILKDFVVRIKSAQGYFSPYVPGWDCHGLPIEHQVDKKLG-SKKKNMSVSDV 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  K+A   +  Q   FKR GV  DW+NPY+T+D EYEA  +    +    G +Y+G 
Sbjct: 122 RKECRKYADRFIDIQRNEFKRLGVLGDWDNPYVTMDFEYEAVTLGELYKFFNNGGVYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPVHW  S  TALAEAE+EY + H S SI+  F + +      G+  E    + + +WTT
Sbjct: 182 KPVHWCTSCVTALAEAEIEYAQ-HTSDSIFVKFEVDAKTAEEFGIEGE---KISVIIWTT 237

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN AVA + +L+Y+ V I+S             S  GN+   +    I+VA  L
Sbjct: 238 TPWTLPANLAVAFHPELEYSFVRIKS-------------SENGNLKAGE---IIVVAKKL 281

Query: 405 VPTLEAKWGTKLVIK-KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  L  ++G     + KT  G D EN    HP  +R+  ++I G+++TTE G+G+VHTAP
Sbjct: 282 VEDLMQEFGVNDYEEIKTAFGIDFENKYAHHPFYDRK-SLMILGEHVTTEQGSGIVHTAP 340

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHGQEDY    +YGL +L+PVDD G F      F G ++    N  +V+++ E  SLI  
Sbjct: 341 GHGQEDYEVGREYGLEVLNPVDDYGIFKGSLPVFGGKNIF-KANPEIVEHMRENGSLIKS 399

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
              EH YP+ WR KKP +FRAT QWF S+E    R+ A+  I +VKW+P
Sbjct: 400 SKVEHSYPHCWRCKKPVVFRATPQWFISMENNDLRKNALSEIKKVKWIP 448



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 122/209 (58%), Gaps = 7/209 (3%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 611
           V+G  +    ++G V   P +    YGA++LRLWVS+ DY+ DV I   +++++ + YRK
Sbjct: 604 VDGEGRKMSKSVGNVI-TPDEIVNKYGAEILRLWVSAEDYSEDVRISADIIKRLVESYRK 662

Query: 612 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 670
           +R T RYLLGNL D++   + +SYD L  +D+Y L + E     I  +++ YQF   +  
Sbjct: 663 IRNTSRYLLGNLSDFQPDEDMVSYDHLLDLDRYILIKWEKAKNRILTAFDKYQFHTFYHT 722

Query: 671 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
              F I  LS+FY D+ KDRLYT    S  R+S QTV+   +  +  +++PIL   A+++
Sbjct: 723 FINFCINTLSSFYLDILKDRLYTYKADSHYRKSAQTVVFTLMKEMCIIMSPILSFTADEI 782

Query: 731 WQNLPFAYTLEDGSAAEFVFESKWPVLDE 759
           W+ LP     E  S +EFVFE  +P + E
Sbjct: 783 WEYLP-----EYESKSEFVFEEIFPKIQE 806


>gi|347522215|ref|YP_004779786.1| isoleucyl-tRNA synthetase [Lactococcus garvieae ATCC 49156]
 gi|385833600|ref|YP_005871375.1| isoleucyl-tRNA synthetase [Lactococcus garvieae Lg2]
 gi|343180783|dbj|BAK59122.1| isoleucyl-tRNA synthetase [Lactococcus garvieae ATCC 49156]
 gi|343182753|dbj|BAK61091.1| isoleucyl-tRNA synthetase [Lactococcus garvieae Lg2]
          Length = 928

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 204/469 (43%), Positives = 291/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MRA    +E    K W++ +++      N+G+ +F+LHDGPPYANG
Sbjct: 2   KIKDTLNLGKTAFPMRAGLPNKESGWQKGWEEAKLYEARQALNEGKPSFMLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ ++     +K++    
Sbjct: 62  NIHVGHALNKISKDIIVRYKSMSGFRAPYVPGWDTHGLPIEQQLSKA--GMNRKEMDMLD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              +  K+A   V  Q + FK  GV ADW  PY+TL PEYEAAQI VFG+M+ +GYIY+G
Sbjct: 120 YLEECRKYALKQVDMQRSDFKSLGVLADWERPYMTLLPEYEAAQIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           +KP++WSPSS ++LAEAE+EY +   S SI+  F+         G L E   D+   +WT
Sbjct: 180 QKPIYWSPSSESSLAEAEIEYQDVR-SASIFVAFK----AKDVKGRLPE---DVEFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + V+   +Y+VVE+ S                        + F+I +  
Sbjct: 232 TTPWTLPANMGIFVHPDYEYSVVEVGS------------------------RKFVIASEM 267

Query: 404 LVPTLEA-KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L    E  +W    V+ +TL GSD++     HP  +R+  +++ GDY+T +SGTGLVH+A
Sbjct: 268 LSKVAETLEWENPTVL-QTLKGSDMDMMTAHHPFYDRES-LIMNGDYVTLDSGTGLVHSA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY  S KY L +LSPVD+ G +T+EA    G+    +GN  V K+L+E+ +L+ 
Sbjct: 326 PGHGEDDYFFSRKYKLEVLSPVDNRGYYTDEAPGLEGI-FYDEGNKIVSKWLEEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP IFRAT QWFAS++ FR+  +  I QV W+ P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRENILSEIEQVDWIIP 433



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 116/188 (61%), Gaps = 7/188 (3%)

Query: 569 VPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW- 626
           + P +  G  GAD+LRLWV+SVD   DV +  ++L Q+S++YRK+R T+R+L+ N  D+ 
Sbjct: 602 ILPSDVTGKLGADILRLWVASVDTEADVRVSMEILNQVSEVYRKIRNTMRFLIANTTDFD 661

Query: 627 RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
           +  N++SY++L  +D+Y L +   +VK +RE+Y+SY F  +++ +  F+  DLS FY D 
Sbjct: 662 KNTNAVSYENLRSVDKYMLAKFNTLVKAVREAYDSYNFMSVYKQVVNFLTNDLSAFYLDF 721

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL-----PFAYTLE 741
           AKD +Y     +  RRS QTV+   L  + +++ PILPH AE++W  L      FAY  E
Sbjct: 722 AKDVVYIEAANAADRRSMQTVMYTMLADLTKLLVPILPHTAEEIWSYLEAETEEFAYLAE 781

Query: 742 DGSAAEFV 749
                +F 
Sbjct: 782 MPEVKDFT 789


>gi|348027410|ref|YP_004767215.1| isoleucyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
 gi|341823464|emb|CCC74388.1| isoleucyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
          Length = 931

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 211/472 (44%), Positives = 283/472 (59%), Gaps = 39/472 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  T+ LP+T F MR N   REP+  K W D++++ +   K DG   F+LHDGPPYANG 
Sbjct: 3   YGKTLHLPQTDFPMRGNLPKREPDFLKFWQDNKIYEKRLKKRDGAPKFILHDGPPYANGK 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK+LKDII +YK  Q    +YVPGWD HGLPIE  V++    + + ++ P  L
Sbjct: 63  IHIGHALNKVLKDIILKYKTQQGCYTKYVPGWDTHGLPIEHAVIKDTGLN-RHEMAPLDL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           RAK   +A A V+ Q   F R GV  DW++PYLTL    E AQI VFG+M+ +GYIY+G 
Sbjct: 122 RAKCRDYALARVEEQKKDFIRLGVLGDWDHPYLTLRKPVEVAQIGVFGEMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA-VWT 343
           K V+W P   TALAEAE+EY +   S SIY  F+ V        +     PD   A +WT
Sbjct: 182 KTVYWCPHCETALAEAEIEYKDDK-SFSIYVKFKSVDL---NCHMPKGADPDKVFALIWT 237

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P N A++ N   +Y  V I     GD                     ++++A D
Sbjct: 238 TTPWTIPCNVAISANENFEYVWVRI-----GDE--------------------YLLMAKD 272

Query: 404 LV-PTLEA-KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           LV PT++A K     V+   + G  LE   + HP  +R+ P+++ GD++T E+GTGLVHT
Sbjct: 273 LVEPTMKAGKVEDYEVLPDVMTGKQLEGLVFKHPFYDRKVPIIL-GDHVTLEAGTGLVHT 331

Query: 462 APGHGQEDYVTSLKY---GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQM 518
           AP HGQ+D+    KY   GL  L  VD  G++T++   F G  V  D NV V+K L E  
Sbjct: 332 APDHGQDDFDVCKKYAAWGLKPLGTVDGTGRYTDKVPGFEGQFVF-DTNVPVIKKLAELG 390

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +L  +  + H+YP+ WR K+P I+RATEQWFASV+GFRQ A+DAI  VKW+P
Sbjct: 391 ALFAKSTFRHQYPHCWRCKEPIIYRATEQWFASVDGFRQKALDAIDTVKWIP 442



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/225 (42%), Positives = 136/225 (60%), Gaps = 18/225 (8%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    ++G    V PQE    YGADVLRLWVSS DY GD+ + P++L+Q+SD+Y
Sbjct: 597 TVDGEGRKMSKSVGNT--VAPQEVIEKYGADVLRLWVSSADYQGDIRLSPKILKQLSDVY 654

Query: 610 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           RK+R T RYLLGNL D+    + I+Y D+  +D++AL +LE + + + ++YE+YQF  ++
Sbjct: 655 RKIRNTFRYLLGNLADFDPAKDMIAYQDMTDLDKWALLRLEQVFEEVTDAYENYQFHVMY 714

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
             I  F  VDLS  Y DV KDRLYT    S  RRS Q+ +   L ++V+++AP+L   AE
Sbjct: 715 HAIHNFCTVDLSAMYLDVIKDRLYTEKADSQIRRSAQSAMYVILDTLVKIVAPVLSFTAE 774

Query: 729 DVWQNLPFAYTLEDGSAAEFVFESKWPV---------LDEKWRTF 764
           +VWQN+P     E     E V  + WP          LD +W  F
Sbjct: 775 EVWQNMPAVEGKE-----ESVLLTDWPKAHKEYLDADLDARWAQF 814


>gi|327262525|ref|XP_003216074.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Anolis
           carolinensis]
          Length = 931

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 191/423 (45%), Positives = 266/423 (62%), Gaps = 30/423 (7%)

Query: 150 ENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQ 209
           + F LHDGPPYANG+ H+GHALNKILKDI NR+ ++++Y V YVPGWDCHGLPIELK L 
Sbjct: 29  KEFCLHDGPPYANGDAHVGHALNKILKDITNRFHMMRDYVVHYVPGWDCHGLPIELKALS 88

Query: 210 SLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIE 269
             +ED   DL+P ++R KA +FA+  ++ Q ++F R+G+ A+W+N Y T D +YEA Q+ 
Sbjct: 89  ECEED---DLSPMEIRQKAKEFAEKVIEKQKSAFIRWGIMANWDNCYHTFDKKYEAKQLH 145

Query: 270 VFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL 329
           +F QM  +GY+Y+  KPV WSPS+ TALAEAELEY + HVSRS+Y  F ++  PP  S +
Sbjct: 146 IFHQMFDKGYVYQDYKPVFWSPSTNTALAEAELEYNQQHVSRSVYIKFPLLKPPPKLSSV 205

Query: 330 LNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNV 389
           ++  LP + L +WTT  WT+PAN AV      +Y++V+  +  E                
Sbjct: 206 IDG-LPAVNLIIWTTQAWTIPANQAVCYMPNSEYSIVKCTNTGE---------------- 248

Query: 390 LKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHP-VDNRQCPVVIGGD 448
                    I+ASD V +  A   T+  +  T  G+D EN    HP +  +Q P ++  +
Sbjct: 249 -------HFIIASDRVQSTAALLDTQFDVISTFKGTDFENGMCSHPTIPGKQSP-LLPAN 300

Query: 449 YITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGN 507
           ++T   GTGLVHTAP HG EDY  +  + LP+   VD++G+FTE AG +     VL +GN
Sbjct: 301 HVTMSKGTGLVHTAPAHGMEDYGVASHHQLPMDCLVDEKGRFTEAAGSELQKKAVLDEGN 360

Query: 508 VAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVK 567
            AV++ L    +L+ EE + H YPYDWRTKKP I RA++QWF      + AA +A+ +VK
Sbjct: 361 EAVIQMLHGAKNLLKEEKFVHSYPYDWRTKKPVIIRASKQWFIDTANLKSAAQEALKKVK 420

Query: 568 WVP 570
            VP
Sbjct: 421 CVP 423



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 78/189 (41%), Positives = 111/189 (58%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P YGAD+LR WV+  +   +V+IGP VL    +   KLR TLR+LLGNL  +    +SI 
Sbjct: 609 PPYGADILRWWVAESNVFTEVLIGPAVLNSAREDINKLRNTLRFLLGNLASFNPETDSIP 668

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
             D+ +IDQY L  L      + ++Y+ Y + K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 669 TSDMYLIDQYILHLLHGYATKVTQAYKEYDYGKVIRLLEAFHTRELSSFYFSIVKDRLYC 728

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L+A L ++VR  APILPHLAE+V+Q LP+         ++ VF S 
Sbjct: 729 EEEKDPKRRSCQTALAAVLDTMVRSFAPILPHLAEEVFQYLPYR------KESDSVFRSG 782

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 783 WMNTSPVWK 791


>gi|284048830|ref|YP_003399169.1| isoleucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283953051|gb|ADB47854.1| isoleucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 934

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 208/477 (43%), Positives = 284/477 (59%), Gaps = 38/477 (7%)

Query: 101 KEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPP 159
           K++ +Y  T++LP+T F MRA    REP+    W  + ++      + G + FVLHDGPP
Sbjct: 3   KKDDKYAATLNLPETEFPMRAGLPKREPDFLDFWYKNDIYGEKQKLHAGHKKFVLHDGPP 62

Query: 160 YANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDL 219
           YANG +HMGHALNK+LKDII +YK  Q Y   YVPGWD HG+PIE   L++   D  K L
Sbjct: 63  YANGKIHMGHALNKVLKDIIIKYKYAQGYDTPYVPGWDTHGMPIEHACLKATGVDRHK-L 121

Query: 220 TPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGY 279
           +P +LR    ++A   +  Q   FKR GV  DW++PY+TLDP +EA QI VFG M+ +GY
Sbjct: 122 SPVELRKMCREYALQWIDTQRKDFKRLGVLGDWDHPYVTLDPHFEAEQIRVFGTMANKGY 181

Query: 280 IYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG- 338
           IY+GKK V+W P   TALAEAE+EY +   + +I+    +V      +GL  E       
Sbjct: 182 IYKGKKTVYWCPHCETALAEAEIEYAD-QKTPTIFVKMPLVK----DNGLTPEAAQGKKA 236

Query: 339 -LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVF 397
            + +WTTTPWT+PAN AVA+N    YA VE                   G VL       
Sbjct: 237 YMVIWTTTPWTIPANVAVALNPDFDYAWVEYN-----------------GEVL------- 272

Query: 398 IIVASDLVPTLEAKWGTKL-VIKKTLAGSDLE--NCRYVHPVDNRQCPVVIGGDYITTES 454
            I+A+D+V  +  + G +   +  T+ G   E   C +  P  N +  +V+  DY+  E+
Sbjct: 273 -IMAADMVDKVAQECGVEFGPVLGTIKGRAFEYAECEHPFPEYNHRKSLVVLADYVDKEA 331

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           G+G VHTAPGHG  DY+T LKY LPIL PVD +G FTEEAG+      + D N  V+K+L
Sbjct: 332 GSGCVHTAPGHGDVDYLTGLKYNLPILCPVDQKGCFTEEAGELFQGKFVFDSNGLVIKHL 391

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQ-VKWVP 570
            EQ +++ ++   H+Y + WR K P IFRA+EQWFASV+GFR  A+ AI + V+W+P
Sbjct: 392 AEQNAILGKKTIHHQYAHCWRCKNPIIFRASEQWFASVDGFRDDALKAIAEDVQWIP 448



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 124/221 (56%), Gaps = 19/221 (8%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP +    YGAD++RLW +S DY  DV I P +L+Q+++ YRK+R T+RY+LGN HD+  
Sbjct: 620 VPQEVIDQYGADIVRLWAASSDYKQDVRISPVILKQLAEAYRKVRNTIRYILGNTHDFDY 679

Query: 629 -GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
               +++ ++  +DQ+AL + E + K++ E+YE+Y F  +F  I  F  VD+S+FY D+ 
Sbjct: 680 ETQKVAFAEMEELDQWALMRFEALKKDVTEAYETYDFHVLFHAIHDFCTVDMSSFYLDII 739

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KDRLYT       RRS QT ++  L  ++ ++ P+L    E+V+Q     Y  +   A +
Sbjct: 740 KDRLYTSRKDGKARRSAQTAMTQILRELMVMLMPVLSFTMEEVYQ-----YMNKPADAPQ 794

Query: 748 FVFESKWPV---------LDEKWRTFPVGEIYFWGKILEVI 779
            V    WP          L  KW  F    I   G+I +V+
Sbjct: 795 SVQMLPWPQAHPEYVKEDLKAKWDAF----IAIRGEITKVL 831


>gi|421765862|ref|ZP_16202642.1| Isoleucyl-tRNA synthetase [Lactococcus garvieae DCC43]
 gi|407625632|gb|EKF52327.1| Isoleucyl-tRNA synthetase [Lactococcus garvieae DCC43]
          Length = 928

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 202/469 (43%), Positives = 292/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MRA    +E    K W D +++    + N+G+ +F+LHDGPPYANG
Sbjct: 2   KIKDTLNLGKTAFPMRAGLPNKESGWQKEWSDAKLYEARQELNEGKPSFMLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ ++     +K++    
Sbjct: 62  NIHVGHALNKISKDIIVRYKSMSGFRAPYVPGWDTHGLPIEQQLSKA--GMNRKEMDMLD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              +  K+A   V  Q + FK  GV ADW+ PY+TL PEYEAAQI VFG+M+ +GYIY+G
Sbjct: 120 YLEECRKYALKQVDMQRSDFKSLGVLADWDRPYMTLLPEYEAAQIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           +KP++WSPSS ++LAEAE+EY +   S SI+  F+         G+L E   D    +WT
Sbjct: 180 QKPIYWSPSSESSLAEAEIEYQDVR-SASIFVAFK----AKDVKGVLPE---DAEFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + V+   +Y+VVE+                         ++ F++ +  
Sbjct: 232 TTPWTLPANMGIFVHPDYEYSVVEV------------------------GERKFVVASEM 267

Query: 404 LVPTLEA-KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L    E  +W    V+ +T+ GS+++     HP  +R+  +V+ GDY+T +SGTGLVH+A
Sbjct: 268 LSKVAETLEWENPTVL-QTVKGSEMDMMTAQHPFYDRES-LVMNGDYVTLDSGTGLVHSA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY  S KY L +LSPVD+ G +T+EA    G+    +GN  V K+L+E+ +L+ 
Sbjct: 326 PGHGEDDYFFSRKYKLEVLSPVDNRGYYTDEAPGLEGI-FYDEGNKVVSKWLEEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP IFRAT QWFAS++ FR+  +  I QV W+ P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRENILREIEQVDWIIP 433



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/203 (38%), Positives = 123/203 (60%), Gaps = 10/203 (4%)

Query: 569 VPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW- 626
           + P +  G  GAD+LRLWV+SVD   DV +  ++L Q+S++YRK+R T+R+L+ N  D+ 
Sbjct: 602 ILPSDVTGKLGADILRLWVASVDTEADVRVSMEILNQVSEVYRKIRNTMRFLIANTSDFD 661

Query: 627 RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
           +  +++SY+ L  +D+Y L +   +VK++RE+Y+SY F  +++ I  F+  DLS FY D 
Sbjct: 662 KNRDTVSYEKLRSVDKYMLVKFNELVKSVREAYDSYNFMSVYKQIINFLTNDLSAFYLDF 721

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLE 741
           AKD +Y     S  RRS QTV+   L  + +++ PI+PH AE++W  L      FAY  E
Sbjct: 722 AKDVVYIEAANSADRRSMQTVMYTMLAGLTKLLVPIIPHTAEEIWSYLEAEEEKFAYLAE 781

Query: 742 DGSAAEFVFESKWPVLDEKWRTF 764
              A   +F +   +L E W  F
Sbjct: 782 MPEAK--IFTASEELLGE-WEAF 801


>gi|422810097|ref|ZP_16858508.1| Isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
 gi|378751761|gb|EHY62349.1| Isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 921

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 208/468 (44%), Positives = 290/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN G   ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAGRKAYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            LHMGHALNK +KDII RYK +  +   YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  ELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V+ Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMTQVEGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P+L  K G +   + KT+ GS+L++    HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLPSLREKLGFEDATVVKTVRGSELDSVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L +L+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 118/167 (70%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           +P +     GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+  
Sbjct: 603 LPSKVIKQLGADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFHP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N++SY++L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D A
Sbjct: 663 TTNTVSYENLREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 723 KDVVYIEAADSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSL 769


>gi|301063341|ref|ZP_07203880.1| isoleucine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300442504|gb|EFK06730.1| isoleucine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 932

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/468 (42%), Positives = 279/468 (59%), Gaps = 32/468 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVAD-KNDGENFVLHDGPPYANGN 164
           YK T++LPKT F M+ N + +EPEI + W+  +++  + +   +   ++LHDGPPYANGN
Sbjct: 3   YKKTLNLPKTAFPMKGNLVKKEPEILERWEKEKLYETIREVSKERPKYMLHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMG A NK+LKDII + K +  + V YVPGWDCHGLPIE KV   L E  K+++T +++
Sbjct: 63  IHMGTAFNKVLKDIIIKSKQMAGFDVPYVPGWDCHGLPIEHKVDGELGE-KKREMTQAEI 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A+  V  Q A FKR GV  +W+ PYLT++  YEA  +  FG+ +L G + R K
Sbjct: 122 RGHCRRYAEKYVDIQRAEFKRLGVLGEWDRPYLTMNYPYEATIVREFGKFALNGSLVRSK 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KP++W  S +TALAEAE+EY E H S SI+  F M+S       +       + + +WTT
Sbjct: 182 KPIYWCTSCKTALAEAEVEYDE-HSSPSIFVKFPMISDLAEVDPVFKG--KQVSVVIWTT 238

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+A++    Y  VE                         + +V I+    L
Sbjct: 239 TPWTLPANLAIALHPDFPYVAVETA-----------------------ENQVMILAEGLL 275

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
              +E        I KT   ++LEN    HP+  R   V++   Y+T ESGTG VHTAPG
Sbjct: 276 TECMETFGIASYEILKTFHATELENLEARHPIYERPS-VIVLAPYVTLESGTGCVHTAPG 334

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG+EDY T LKYGL + SPVDD G+FT +   FSG++V  + N +V+  L     L+ E+
Sbjct: 335 HGREDYETGLKYGLEVYSPVDDAGRFTPDVEHFSGMEVF-EANRSVIDKLISLGVLVKEQ 393

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
              H+YP+ WR KKP IFR+TEQWF S++  G R AA+ AI +V W+P
Sbjct: 394 KIAHEYPHCWRCKKPVIFRSTEQWFISMDKTGLRDAALKAINEVNWIP 441



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 120/185 (64%), Gaps = 4/185 (2%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQE-APGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +A   + G V  +PP+     YGA++LRLWV+  DY  ++ +  ++L++++D YR
Sbjct: 597 VDGKGKAMHKSAGNV--IPPESLIKSYGAEILRLWVAGEDYRDNIRLSKEILQRLTDAYR 654

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T RYLLGNL D+    + + Y  +  +DQ+AL QL+ +   I  +YES++F  ++ 
Sbjct: 655 RIRNTCRYLLGNLQDYDPETDVVPYGQMDELDQWALHQLQGLNDRIMSAYESFEFHLVYH 714

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F ++DLS+FY D+ KDRLYT   T+ +RRS Q  ++  L ++VR++AP+L   A++
Sbjct: 715 HLHNFCVLDLSSFYLDIIKDRLYTSPQTAISRRSAQFAMNEILETLVRLMAPVLSFTADE 774

Query: 730 VWQNL 734
           +WQ +
Sbjct: 775 IWQYM 779


>gi|422413560|ref|ZP_16490519.1| isoleucine--tRNA ligase [Listeria innocua FSL S4-378]
 gi|313618002|gb|EFR90151.1| isoleucine--tRNA ligase [Listeria innocua FSL S4-378]
          Length = 921

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/468 (44%), Positives = 289/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN G + ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAGRKTYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            LHMGHALNK +KDII RYK +  +   YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  ELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P+L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L IL+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 114/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N +SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNGVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSL 769


>gi|315283055|ref|ZP_07871330.1| isoleucine--tRNA ligase [Listeria marthii FSL S4-120]
 gi|313613297|gb|EFR87166.1| isoleucine--tRNA ligase [Listeria marthii FSL S4-120]
          Length = 921

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/468 (44%), Positives = 288/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN G   ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAGRPTYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            LHMGHALNK +KDII RYK +  +   YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  ELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V+ Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMTQVEGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLPNLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L IL+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 116/158 (73%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D++   N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFQPTVNAVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW NL
Sbjct: 732 DSRDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNNL 769


>gi|423098920|ref|ZP_17086628.1| isoleucine--tRNA ligase [Listeria innocua ATCC 33091]
 gi|370794747|gb|EHN62510.1| isoleucine--tRNA ligase [Listeria innocua ATCC 33091]
          Length = 921

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/468 (44%), Positives = 289/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN G + ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAGRKTYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            LHMGHALNK +KDII RYK +  +   YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  ELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P+L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L IL+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 115/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFHPTTNAVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSL 769


>gi|347727088|gb|AEP19902.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. N39]
          Length = 908

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 212/468 (45%), Positives = 284/468 (60%), Gaps = 42/468 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +P T F MR N   REP +H+ W+   ++ RV +KN G+  ++LHDGPPYANG+
Sbjct: 3   YKDTLLMPDTEFAMRGNLPKREPAMHEAWEQMDLYNRVQEKNAGKPQYILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNK+LKDII R+K L  Y+   +PGWD HGLPIE   LQ    + +K++T ++ 
Sbjct: 63  IHMGHALNKVLKDIIVRFKSLNGYQSPMIPGWDTHGLPIE-NALQKAGVN-RKEMTVAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K A +A   V +Q   FKR G+ AD++NPY+TL PEYEAAQI +FG M+ +GYIY+GK
Sbjct: 121 REKCAAYAMEQVNSQREQFKRLGLLADFDNPYITLLPEYEAAQIRLFGTMAEKGYIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S +IY  F++V          + F+      +WTT
Sbjct: 181 KPVYWSPSSESALAEAEIEYYDKK-SPAIYVAFQVVDG-KDVLQTTDHFV------IWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  +AV+ +L Y  +E                        D K    IVA  L
Sbjct: 233 TPWTIPANLGIAVSDELTYTRIE-----------------------HDGKGY--IVAESL 267

Query: 405 VP--TLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           V   T   KW T   +  +  G + E     HP+ +R   V+I GD++T ++ TGLVHTA
Sbjct: 268 VEEVTTALKW-TDYTVSGSWNGREFEYMTAQHPLYDRTSLVMI-GDHVTADA-TGLVHTA 324

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY     YGL +L PVDD G  T+EA  F GL    D N  +   L+E   L+ 
Sbjct: 325 PGHGEDDYRVGQAYGLDVLCPVDDRGYMTDEAPGFEGL-FYEDANKQIGMKLEENGYLLN 383

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +  +H YP+DWRTKKP IFRAT QWFAS++ FR   +  I +V WVP
Sbjct: 384 LKFIKHSYPHDWRTKKPVIFRATPQWFASIKDFRADMLREIEEVNWVP 431



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 105/159 (66%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 636
           YGA+++RLWVSSVDY  DV       +Q+S++YRK+R TLR+LLGNL+ +     ++++D
Sbjct: 610 YGAEIVRLWVSSVDYQSDVRASHDNFKQVSEVYRKIRNTLRFLLGNLNGFDPSMRVAFED 669

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +P  D++   +L+ +   + ++Y+++ F  ++ +   F + +LS+FY D  KD LY    
Sbjct: 670 MPEADRFMATKLKQLQAKVVKAYDTFDFMAVYHLSHNFCVNELSSFYLDFTKDILYIERE 729

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
               RR+ QTV+   ++++ +++APILPH A++VWQ +P
Sbjct: 730 DDARRRAVQTVMYDTVVTLTKLLAPILPHTADEVWQEVP 768


>gi|16801193|ref|NP_471461.1| isoleucyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|81526006|sp|Q929Z6.1|SYI_LISIN RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|16414641|emb|CAC97357.1| isoleucyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 921

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/468 (44%), Positives = 288/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN G   ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAGRKAYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            LHMGHALNK +KDII RYK +  +   YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  ELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P+L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L IL+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 114/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N +SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNGVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSL 769


>gi|114325408|gb|AAH40376.2| IARS2 protein [Homo sapiens]
          Length = 957

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 202/471 (42%), Positives = 287/471 (60%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+T+F M+     +   E EI +     +++    ++     F LHDGPPY
Sbjct: 3   GRYRDTVLLPQTSFPMKLLGRQQPDTELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 62

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ ++   K+ +VPGWDCHGLPIE+KVL  L  +A+ +L+
Sbjct: 63  ANGDPHVGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSELGREAQ-NLS 121

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +
Sbjct: 122 AMEIRKKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLV 181

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++   P + + 
Sbjct: 182 YRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSIL 240

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN AV    + +YAVV               K S+ G++         ++
Sbjct: 241 VWTTQPWTIPANEAVCYMPESKYAVV---------------KCSKSGDLY--------VL 277

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A+D V ++ +   T      TL+G DLEN    HP+   +   ++  +++T   GTGLVH
Sbjct: 278 AADKVASVASTLETTFETISTLSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVH 337

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V+K L    +
Sbjct: 338 TAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKN 397

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ EE   H YPYDWRTKKP + RA++QWF ++   + AA + + +VK++P
Sbjct: 398 LLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIP 448



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/189 (43%), Positives = 111/189 (58%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 634 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 693

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 694 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 753

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P+          + VF + 
Sbjct: 754 EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIPYI------KEPKSVFRTG 807

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 808 WISTSSIWK 816


>gi|339639142|emb|CCC18370.1| isoleucyl-tRNA synthetase [Lactobacillus pentosus IG1]
          Length = 932

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/469 (43%), Positives = 290/469 (61%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E E   LW +++V+ +    N+G+ +F+LHDGPPYANG
Sbjct: 2   RVKETLNLGKTKFKMRGNLPVKEVERQNLWAENKVYEQRQKLNEGKPSFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKI KD I RYK +  ++  YVPGWD HGLPIE K+ Q+  +  +K ++ ++
Sbjct: 62  DIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHGLPIEQKLKQAGYD--RKKMSDNE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    K+A   V  Q   FKR GV  +W+NPYLTL PE+EAAQ+ VFG  + +  IYRG
Sbjct: 120 FRELCRKYALEQVDHQREEFKRLGVSGEWDNPYLTLKPEFEAAQVRVFGAFAKRHLIYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +ALAEAE+EY +     + Y   R++       G+L++   D  L VWT
Sbjct: 180 KKPVFWSWSSESALAEAEVEYHDVTSPSAFYGE-RVIDG----KGVLDD---DTYLVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + V+A   Y VV+           PA +  +             ++A++
Sbjct: 232 TTPWTIPASEGITVDASFDYVVVQ-----------PAGESRK------------FVLAAE 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+     ++G + V + KT+ G++LEN    HP D+ +  + + GD++T +SGTGLVHTA
Sbjct: 269 LLDENAERFGWEDVQVLKTVKGAELENVLCEHPFDHSRNLLTMLGDFVTLDSGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++DY    KYGLPI +PVD++G  TEEAG  F+G+    D N   +  L +   L+
Sbjct: 329 PGYGEDDYRIGQKYGLPIFAPVDNKGVLTEEAGADFAGV-FYDDANEIALGKLKDAGLLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              PYEH YP+DWRTKKP IFRAT QWFASV   R   + ++  V++ P
Sbjct: 388 KYMPYEHSYPFDWRTKKPIIFRATPQWFASVGDMRDEILKSMDDVQFFP 436



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 102/155 (65%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    + ++++D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADAYKKFRNTVRFMLGNTTDFDPKKDRVAFED 675

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY   +L + V  I++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMAVRLNDFVAEIKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S +RRS QTV    L+++ ++  P+LPH  E++W
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW 770


>gi|449496224|ref|XP_004175169.1| PREDICTED: LOW QUALITY PROTEIN: isoleucine--tRNA ligase,
           mitochondrial [Taeniopygia guttata]
          Length = 994

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/474 (41%), Positives = 282/474 (59%), Gaps = 30/474 (6%)

Query: 101 KEEGRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDG 157
           +E+ RY+ TV LP++ F  +    ++   E +  +     +++     +   + F LHDG
Sbjct: 34  REDSRYRDTVLLPRSRFPAQLPGRLQPETELKTQQKCGFSELYSWQRQRKTKQEFCLHDG 93

Query: 158 PPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKK 217
           PPYANG+ H+GHALNKILKDI NR+ +++ YKV YVPGWDCHGLPIELK L  +     +
Sbjct: 94  PPYANGDPHVGHALNKILKDITNRFHVMRGYKVHYVPGWDCHGLPIELKALSEVK--GAE 151

Query: 218 DLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQ 277
           +L+P ++R +A  FA+  ++ Q ++F R+GV ADW N YLT DP+YEA Q+ VF +M  +
Sbjct: 152 NLSPMEIRQRARAFAERAIEKQKSAFIRWGVMADWANCYLTFDPKYEANQLRVFHKMYDK 211

Query: 278 GYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDL 337
           G IYR  KPV WSPS++TALAEAELEY E HVSRS+Y  F ++ +PP  + +++   P  
Sbjct: 212 GLIYRDYKPVFWSPSTKTALAEAELEYNEQHVSRSVYMKFPLLKSPPKLTAVIDGSSP-A 270

Query: 338 GLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVF 397
            + VWTT PWT+PAN AV       Y++V+  +  +                        
Sbjct: 271 SVLVWTTQPWTLPANQAVCYMPDSAYSIVKCATTGQ-----------------------H 307

Query: 398 IIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
            I+A+D V +  A   T+  +  T  G+DL +    HP    +   ++  +++T   GTG
Sbjct: 308 FILAADRVESTAAVLDTQFEVVSTCKGADLADGSCAHPTIPGKVSPLLPANHVTMTKGTG 367

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDE 516
           LVHTAP HG EDY  +  + LP    VD+ G FTE AG +    +VL +GN AV+K L  
Sbjct: 368 LVHTAPAHGMEDYSVASHHQLPTDCLVDECGYFTEAAGSELKNKNVLEEGNEAVIKMLQA 427

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             SL+ EE Y H YPYDWRTKKP I RA++QWF +    + AA D + +VK +P
Sbjct: 428 AGSLLKEEKYVHSYPYDWRTKKPIIIRASKQWFVNTADVKAAAQDVLKKVKVIP 481



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/189 (42%), Positives = 110/189 (58%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +VMIGP VL    D   KLR TLR++LGN+  +    +SI 
Sbjct: 667 PPYGADVLRWWVAESNVFTEVMIGPVVLNAARDDINKLRNTLRFMLGNVDGFNPETDSIP 726

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
             ++ ++DQY L  L      + E+Y+ Y++ K+ +++Q F    LSNFYF V KDRLY 
Sbjct: 727 PAEMHIVDQYMLHLLHEYGSKVTEAYKQYEYSKVVRLLQAFCSRSLSNFYFSVIKDRLYC 786

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQTVL+  L  +VR  APILPHLAE+V+Q +P+         +E VF + 
Sbjct: 787 EEAKDPKRRSCQTVLAEALDIVVRSFAPILPHLAEEVFQYIPYK------KDSEGVFRTG 840

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 841 WINASSAWK 849


>gi|334882315|emb|CCB83312.1| isoleucyl-tRNA synthetase [Lactobacillus pentosus MP-10]
          Length = 932

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/469 (43%), Positives = 290/469 (61%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E E   LW +++V+ +    N+G+ +F+LHDGPPYANG
Sbjct: 2   RVKETLNLGKTKFKMRGNLPVKEVERQNLWAENKVYEQRQKLNEGKPSFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKI KD I RYK +  ++  YVPGWD HGLPIE K+ Q+  +  +K ++ ++
Sbjct: 62  DIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHGLPIEQKLKQAGYD--RKKMSDNE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    K+A   V  Q   FKR GV  +W+NPYLTL PE+EAAQ+ VFG  + +  IYRG
Sbjct: 120 FRELCRKYALEQVDHQREEFKRLGVSGEWDNPYLTLKPEFEAAQVRVFGAFAKRHLIYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +ALAEAE+EY +     + Y   R++       G+L++   D  L VWT
Sbjct: 180 KKPVFWSWSSESALAEAEVEYHDVTSPSAFYGE-RVIDG----KGVLDD---DTYLVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + V+A   Y VV+           PA +  +             ++A++
Sbjct: 232 TTPWTIPASEGITVDASFDYVVVQ-----------PAGESRK------------FVLAAE 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+     ++G + V + KT+ G++LEN    HP D+ +  + + GD++T +SGTGLVHTA
Sbjct: 269 LLDENAERFGWEDVQVLKTVKGAELENVLCEHPFDHSRNLLTMLGDFVTLDSGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++DY    KYGLPI +PVD++G  TEEAG  F+G+    D N   +  L +   L+
Sbjct: 329 PGYGEDDYRIGQKYGLPIFAPVDNKGVLTEEAGADFAGV-FYDDANEIALGKLKDAGLLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              PYEH YP+DWRTKKP IFRAT QWFASV   R   + ++  V++ P
Sbjct: 388 KYMPYEHSYPFDWRTKKPIIFRATPQWFASVGDMRDEILKSMDDVQFFP 436



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 102/155 (65%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    + ++++D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADAYKKFRNTVRFMLGNTTDFDPKKDRVAFED 675

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY   +L + V  I++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMAVRLNDFVAEIKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S +RRS QTV    L+++ ++  P+LPH  E++W
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW 770


>gi|7678804|dbj|BAA95147.1| mitochondrial isoleucine tRNA synthetase [Homo sapiens]
          Length = 993

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 202/471 (42%), Positives = 287/471 (60%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+T+F M+     +   E EI +     +++    ++     F LHDGPPY
Sbjct: 39  GRYRDTVLLPQTSFPMKLLGRQQPDTELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 98

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ ++   K+ +VPGWDCHGLPIE+KVL  L  +A+ +L+
Sbjct: 99  ANGDPHVGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSELGREAQ-NLS 157

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +
Sbjct: 158 AMEIRKKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLV 217

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++   P + + 
Sbjct: 218 YRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSIL 276

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN AV    + +YAVV               K S+ G++         ++
Sbjct: 277 VWTTQPWTIPANEAVCYMPESKYAVV---------------KCSKSGDLY--------VL 313

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A+D V ++ +   T      TL+G DLEN    HP+   +   ++  +++T   GTGLVH
Sbjct: 314 AADKVASVASTLETTFETISTLSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVH 373

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V+K L    +
Sbjct: 374 TAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKN 433

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ EE   H YPYDWRTKKP + RA++QWF ++   + AA + + +VK++P
Sbjct: 434 LLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIP 484



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/189 (43%), Positives = 111/189 (58%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 670 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 729

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 730 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 789

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P+          + VF + 
Sbjct: 790 EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIPYI------KEPKSVFRTG 843

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 844 WISTSSIWK 852


>gi|335357087|ref|ZP_08548957.1| isoleucyl-tRNA synthetase [Lactobacillus animalis KCTC 3501]
          Length = 931

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/469 (44%), Positives = 287/469 (61%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  VRE E    W++++V+ +    N+G+  FVLHDGPPYANG
Sbjct: 2   RIKDTLNLGKTKFPMRGNLPVRELERQNEWEENKVYEKRQKLNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHA+NKI KDII R K +  ++  YVPGWD HGLPIE ++ ++  +  +K L+ + 
Sbjct: 62  NIHMGHAMNKISKDIIIRAKSMMGFRAPYVPGWDTHGLPIEQQLKKAGVD--RKALSVAD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A   V  Q   FKR GV  +W+NPY+TLDPEYEA QI VFG+M+    IY+G
Sbjct: 120 FREKCREYALEQVDKQRTDFKRLGVAGEWDNPYVTLDPEYEAQQIRVFGKMAENDLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           K+PV+WS SS +ALAEAE+EY +     + YA  R++       G+L+E   D  + VWT
Sbjct: 180 KRPVYWSWSSESALAEAEVEYHDVTSPSAFYAE-RVLDG----KGVLDE---DTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + ++A   YAVV+           PA ++ +             ++A+D
Sbjct: 232 TTPWTIPASEGITIDASFDYAVVQ-----------PAGEERK------------FVMAAD 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+      +G + V   K + G DLE     HP    +  +V+ GD++TTESGTGLVHTA
Sbjct: 269 LIQKNAELFGWEDVKTLKVVKGQDLEYITAQHPFYEDRELLVMLGDFVTTESGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G +DY   +KYGL I +PV D G  T E G +F G+    D N   +  L E   L+
Sbjct: 329 PGYGDDDYKMGMKYGLEIFAPVSDTGHLTAECGPEFDGV-FYEDANEVALNKLREANLLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E  YEH YP+DWRTKKP IFRAT QWFASV+  R   ++AI +V ++P
Sbjct: 388 KEMDYEHSYPFDWRTKKPIIFRATPQWFASVDKIRDNILNAINEVNFLP 436



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 97/165 (58%), Gaps = 1/165 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GA+++RLWV SVD + DV +  +   Q+S+ YRK R T+R+LL N  D+  
Sbjct: 607 VPEEVIKKMGAEIIRLWVLSVDTSADVRVSMESFAQISESYRKFRNTMRFLLANTTDFDP 666

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++I +D+L  IDQY L  +    K I + Y +Y F  I++ +  F+  +LS FY  VA
Sbjct: 667 AKDTIPFDELEAIDQYMLILVNKFTKEILDDYANYNFMDIYKKVINFVTTELSAFYLAVA 726

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQ 732
           KD +Y     +  RRS QTVL   ++ + +++ P++PH  E++W 
Sbjct: 727 KDVVYIEAKDAKKRRSMQTVLYETVVRLAKLMTPVMPHTTEEIWN 771


>gi|389815968|ref|ZP_10207205.1| isoleucyl-tRNA ligase [Planococcus antarcticus DSM 14505]
 gi|388465462|gb|EIM07779.1| isoleucyl-tRNA ligase [Planococcus antarcticus DSM 14505]
          Length = 920

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 210/525 (40%), Positives = 307/525 (58%), Gaps = 59/525 (11%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REPE+ + W++  ++ +V D+  D   F+LHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGNLPNREPEMQQKWEEMDIYKKVLDRTKDRPFFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           LHMGHALNK+LKD++ R + +  +   YVPGWD HGLPIE    Q+L      +K+++ +
Sbjct: 63  LHMGHALNKVLKDMVVRSRSMMGFHAPYVPGWDTHGLPIE----QALTNKGVNRKEMSLA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R    ++A   + +Q + FKR GV  DW+NPY+TL P YEA QIEVFG+M+ +GYIY+
Sbjct: 119 EFRKLCEEYAYQQIDSQRSQFKRIGVRGDWDNPYVTLKPAYEARQIEVFGKMANKGYIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+L E      L +W
Sbjct: 179 GLKPVYWSPSSESSLAEAEIEYHDKK-SPSIYVSFPVTDG----KGVLAE---GTKLVIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  ++V+AKL YA V +   L                          IVA 
Sbjct: 231 TTTPWTIPANLGISVHAKLNYAEVSVNGSL-------------------------YIVAQ 265

Query: 403 DLVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           +L+  +  E +W    VI + L G++LE+    HP+ +R   V++ G+++TT+SGTG VH
Sbjct: 266 ELLKEVAEELEWTDYEVI-RVLQGAELEHILTKHPLYDRASLVML-GEHVTTDSGTGCVH 323

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG++D++   KYGL +L PVD+ G  T+EA  F G +     N ++ + LD   +L
Sbjct: 324 TAPGHGEDDFLIGKKYGLDVLCPVDERGVMTDEAPGFEG-EFYDKANKSITEALDNAGAL 382

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP--------- 571
                  H YP+DWRTKKP I+RAT QWF S++ FR   + AI +  + P          
Sbjct: 383 EKLSFITHSYPHDWRTKKPVIYRATAQWFVSIDAFRDQILKAIRETSFTPAWGETRLYNM 442

Query: 572 -QEAPGYGADVLRLWVSSVDY----TGDVMIGPQVLRQMSDIYRK 611
            ++   +     R+W   +       GD +I  + +  ++D++R+
Sbjct: 443 LRDRGDWNISRQRVWGVPIPVFYAENGDPIITEETIAHIADLFRE 487



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 137/217 (63%), Gaps = 4/217 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    ++G V  VP +     GAD+LRLWV+SVDYT DV +  +  +Q+S++YR
Sbjct: 586 TLDGNGRKMSKSLGNVI-VPSKVMNQMGADILRLWVASVDYTADVRVSDENFKQVSEVYR 644

Query: 611 KLRGTLRYLLGNLHDW-RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R TL++L GNL D+    + ++++D+  +DQY + +L+ +V+ +R+SYE+Y+F  I+ 
Sbjct: 645 KIRNTLKFLHGNLADFSEKEHRVAFEDMREMDQYMVMKLQKMVETVRKSYETYEFSTIYH 704

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  +   DLS+FY DVAKD +Y        RR+ QTV+   L++I+++ API+PH A++
Sbjct: 705 ALNNYCANDLSSFYLDVAKDVVYIESADHPHRRAMQTVMFDSLMAILKLSAPIIPHTADE 764

Query: 730 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTF 764
           +W  L F    +++     E V  + +  LDEKW  F
Sbjct: 765 LWSYLSFVEEESVQLTDFPEAVSNAAFEGLDEKWSRF 801


>gi|16804058|ref|NP_465543.1| isoleucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|386050994|ref|YP_005968985.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|404284516|ref|YP_006685413.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2372]
 gi|405759070|ref|YP_006688346.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2479]
 gi|81508283|sp|Q8Y5N8.1|SYI_LISMO RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|16411472|emb|CAD00097.1| isoleucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|346424840|gb|AEO26365.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|404234018|emb|CBY55421.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2372]
 gi|404236952|emb|CBY58354.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2479]
          Length = 921

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/468 (44%), Positives = 288/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN G   ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAGRPTYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            LHMGHALNK +KDII RYK +  +   YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  ELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMKQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P+L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L IL+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 115/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSL 769


>gi|217963834|ref|YP_002349512.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|386008785|ref|YP_005927063.1| ileS [Listeria monocytogenes L99]
 gi|386027394|ref|YP_005948170.1| isoleucyl-tRNA synthetase [Listeria monocytogenes M7]
 gi|254782418|sp|B8DBR2.1|SYI_LISMH RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|217333104|gb|ACK38898.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307571595|emb|CAR84774.1| ileS [Listeria monocytogenes L99]
 gi|336023975|gb|AEH93112.1| isoleucyl-tRNA synthetase [Listeria monocytogenes M7]
          Length = 921

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 208/468 (44%), Positives = 288/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN G   ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAGRPTYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            LHMGHALNK +KDII RYK +  +   YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  ELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P+L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L +L+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 115/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFHPTTNAVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y + +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMMIKLNDLVKNVKDSYEAFEFSAIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSL 769


>gi|436842242|ref|YP_007326620.1| isoleucyl-tRNA synthetase [Desulfovibrio hydrothermalis AM13 = DSM
           14728]
 gi|432171148|emb|CCO24519.1| isoleucyl-tRNA synthetase [Desulfovibrio hydrothermalis AM13 = DSM
           14728]
          Length = 938

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 211/479 (44%), Positives = 284/479 (59%), Gaps = 48/479 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T+ LPKT F M+AN   REPE+ K W++  V+ ++ + N D E +VLHDGPPYANG+
Sbjct: 4   YKKTLCLPKTKFPMKANLKQREPEMLKRWEEISVYDKMVEANADAEKYVLHDGPPYANGH 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMG A+NK+LKDII + + LQ  K  YVPGWDCHGLPIE KV Q L +  KK+L    +
Sbjct: 64  IHMGTAMNKVLKDIIVKSRNLQGMKAEYVPGWDCHGLPIEHKVEQDL-KKKKKELPTLII 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A+  V  Q   FKR GV  +W NPYLT+ PEYEAA     G+    G + RGK
Sbjct: 123 RKLCREYARKFVDIQRKEFKRLGVMGNWENPYLTMKPEYEAATARELGRFMESGSVVRGK 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG------ 338
           KP+HW    RTALAEAE+EY E H S SIY  F     P +   +L     D+       
Sbjct: 183 KPIHWCCDCRTALAEAEVEY-EDHTSPSIYVRF-----PLNDEKVLKALPEDVASKVDLS 236

Query: 339 ---LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
              + +WTTTPWT+P N AVAV+ +  Y V E+     GD                    
Sbjct: 237 RTYVCIWTTTPWTIPDNMAVAVHPEFDYCVAEVN----GD-------------------- 272

Query: 396 VFIIVASDLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
              I+A  L+P     +G  K  +  T+AG+ LE     HP  +R+ PVV+  DY+T +S
Sbjct: 273 -IYILAERLLPVCAETFGWEKWNVLATVAGAKLEGAVAKHPFYDRESPVVL-ADYVTLDS 330

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           GTG+VHTAPGHG+ED+ T  +YGL + SP+++EG F ++   F+G+ V  D N  V++ L
Sbjct: 331 GTGVVHTAPGHGREDFETGNRYGLEVYSPMNNEGVFLKDVEFFAGMKVF-DANPKVIEKL 389

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 570
           +E  +L+ ++   H YP+ WR K+P IFRAT QWF S+E    R+ A+ AI   VKW+P
Sbjct: 390 EEVGNLLAKQNITHSYPHCWRCKEPVIFRATTQWFISMEENDLRKKALKAIRDDVKWLP 448



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 117/191 (61%), Gaps = 8/191 (4%)

Query: 562 AIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 620
           +IG V  + PQE    +GA++LR+WVS+V+Y  DV I  ++L +M D YR++R T RY+L
Sbjct: 616 SIGNV--IAPQEIIDQHGAEILRMWVSAVNYQEDVRISDEILSRMVDTYRRVRNTCRYIL 673

Query: 621 GNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDL 679
           GNL  +    ++++ D+L  ID +AL  ++   + I+++Y  ++F K++  +      +L
Sbjct: 674 GNLDGFNPEADAVAVDELLPIDHFALDLVKRQHEVIQKAYTDFEFHKVYHTLHNLCTTEL 733

Query: 680 SNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT 739
           S+FY D+ KDRLY  G  S  RRS QT+L   +L +++ +APIL   AE+ + ++    +
Sbjct: 734 SSFYLDIIKDRLYVSGEKSLERRSAQTILWQTMLMLLKDMAPILSFTAEEAYSHM----S 789

Query: 740 LEDGSAAEFVF 750
            E    AE VF
Sbjct: 790 AEMKGDAETVF 800


>gi|384948138|gb|AFI37674.1| isoleucyl-tRNA synthetase, mitochondrial precursor [Macaca mulatta]
          Length = 1012

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 204/471 (43%), Positives = 285/471 (60%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRA---NALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+T+F M+        +E EI +     +++    ++     F LHDGPPY
Sbjct: 58  GRYRDTVLLPRTSFPMKLLGRQQPDKELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ ++   KV +VPGWDCHGLPIE+KVL  L  +A+ +L+
Sbjct: 118 ANGDPHVGHALNKILKDIANRFHMMSGSKVHFVPGWDCHGLPIEIKVLSELGREAQ-NLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +
Sbjct: 177 AMEIREKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++   P +   
Sbjct: 237 YRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSFL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN AV    + +YAVV               K S+ G++         I+
Sbjct: 296 VWTTQPWTIPANEAVCYMPESKYAVV---------------KCSKSGDLY--------IL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A+D V T+ +   T      T +G DLEN    HP+   +   ++  +++T   GTGLVH
Sbjct: 333 AADKVETVASTLETAFETISTFSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ EE   H YPYDWRTKKP + RA++QWF ++   + AA + + +VK++P
Sbjct: 453 LLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIKIAAKELLKKVKFIP 503



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 84/189 (44%), Positives = 112/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 749 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYC 808

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809 EKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 863 WISTSSIWK 871


>gi|422416550|ref|ZP_16493507.1| isoleucine--tRNA ligase [Listeria innocua FSL J1-023]
 gi|313623007|gb|EFR93300.1| isoleucine--tRNA ligase [Listeria innocua FSL J1-023]
          Length = 921

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 208/468 (44%), Positives = 288/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN G   ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAGRPTYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            LHMGHALNK +KDII RYK +  +   YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  ELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P+L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L +L+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 115/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    NS+SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNSVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSL 769


>gi|114572728|ref|XP_514209.2| PREDICTED: isoleucine--tRNA ligase, mitochondrial isoform 3 [Pan
           troglodytes]
 gi|410224418|gb|JAA09428.1| isoleucyl-tRNA synthetase 2, mitochondrial [Pan troglodytes]
 gi|410259032|gb|JAA17482.1| isoleucyl-tRNA synthetase 2, mitochondrial [Pan troglodytes]
 gi|410308538|gb|JAA32869.1| isoleucyl-tRNA synthetase 2, mitochondrial [Pan troglodytes]
 gi|410330099|gb|JAA33996.1| isoleucyl-tRNA synthetase 2, mitochondrial [Pan troglodytes]
          Length = 1012

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 202/471 (42%), Positives = 287/471 (60%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+T+F M+     +   E EI +     +++    ++     F LHDGPPY
Sbjct: 58  GRYRDTVLLPQTSFPMKLLGRQQPDTELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ ++   K+ +VPGWDCHGLPIE+KVL  L  +A+ +L+
Sbjct: 118 ANGDPHVGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSELGREAQ-NLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +
Sbjct: 177 AMEIRKKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++   P + + 
Sbjct: 237 YRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSIL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN AV    + +YAVV               K S+ G++         ++
Sbjct: 296 VWTTQPWTIPANEAVCYMPESKYAVV---------------KCSKSGDLY--------VL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A+D V ++ +   T      TL+G DLEN    HP+   +   ++  +++T   GTGLVH
Sbjct: 333 AADKVASVASTLETTFETISTLSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ EE   H YPYDWRTKKP + RA++QWF ++   + AA + + +VK++P
Sbjct: 453 LLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIP 503



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/189 (44%), Positives = 112/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 749 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 808

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L   L  +VR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809 EKENDPKRRSCQTALVEILDVMVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 863 WISTSSIWK 871


>gi|323489509|ref|ZP_08094736.1| isoleucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396640|gb|EGA89459.1| isoleucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 920

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 203/469 (43%), Positives = 282/469 (60%), Gaps = 43/469 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF-VLHDGPPYANGN 164
           YK T+ +PKT F MR N   REPE+ + W+D  ++ +V D+  G  F VLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGNLPNREPEMQQKWEDMNIYKQVQDRTAGRPFFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           LHMGHALNK+LKD+I R + +  +   YVPGWD HGLPIE    Q+L      +K+++ +
Sbjct: 63  LHMGHALNKVLKDMIVRSRSMMGFHAPYVPGWDTHGLPIE----QALTNKGVNRKEMSLA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R    ++A   +  Q + FKR GV  DW NPY+TL P YEA QIEVFG+M+ +GYIY+
Sbjct: 119 EFRKLCEEYAFQQIDNQRSQFKRIGVRGDWENPYVTLKPAYEARQIEVFGKMANKGYIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WSPSS ++LAEAE+EY +   S SIY  F +        G+L E        +W
Sbjct: 179 GLKPVYWSPSSESSLAEAEIEYHDKK-SPSIYVSFPVTDG----KGVLAE---GTNFIIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  ++V+AKL YA V +                              IVA 
Sbjct: 231 TTTPWTIPANLGISVHAKLDYAEVSVNGSQ-------------------------YIVAQ 265

Query: 403 DLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +L+  +  + G T   + + + G +LEN    HP+ +R   V++ G+++TT+SGTG VHT
Sbjct: 266 ELLKEVSEELGWTDAEVVRVIKGEELENILTKHPLYDRTSLVML-GEHVTTDSGTGCVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++D++   KYGL +L PVD+ G  T EA  F G +     N ++ + LD+  +L 
Sbjct: 325 APGHGEDDFLIGKKYGLDVLCPVDERGVMTAEAPGFEG-EFYDKANKSITEALDKVGALE 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                 H YP+DWRTKKP I+RAT QWF S+E FR   ++AI +  + P
Sbjct: 384 KLTFITHSYPHDWRTKKPVIYRATAQWFVSIEAFRDQILNAIKETSFTP 432



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 134/217 (61%), Gaps = 4/217 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    ++G V  VP +     GAD+LRLWV+SVDYT DV +  +  +Q+S++YR
Sbjct: 586 TLDGNGRKMSKSLGNVI-VPSKVMNQMGADILRLWVASVDYTADVRVSDENFKQVSEVYR 644

Query: 611 KLRGTLRYLLGNLHDW-RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R TL++L GNL D+    + ++++D+  +DQY   +L+ +V+ +R+ YE+Y+F  I+ 
Sbjct: 645 KIRNTLKFLHGNLADFNEQEHRVAFEDMREMDQYMAMKLQKMVETVRKGYETYEFSTIYH 704

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  +   DLS+FY DVAKD +Y        RR+ QTV+   L++I+++ API+PH A++
Sbjct: 705 ALNNYCANDLSSFYLDVAKDVVYIESADHPHRRAMQTVMFDSLMAILKLAAPIIPHTADE 764

Query: 730 VWQNLPFA--YTLEDGSAAEFVFESKWPVLDEKWRTF 764
           +W  L F    +++     E V    +  L++KW  F
Sbjct: 765 LWSYLSFVEEESVQLTDFPEAVLNPAFEGLNDKWSRF 801


>gi|335996872|ref|ZP_08562789.1| isoleucyl-tRNA synthetase [Lactobacillus ruminis SPM0211]
 gi|335351942|gb|EGM53433.1| isoleucyl-tRNA synthetase [Lactobacillus ruminis SPM0211]
          Length = 915

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 207/455 (45%), Positives = 289/455 (63%), Gaps = 37/455 (8%)

Query: 119 MRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGNLHMGHALNKILKD 177
           MR N  VRE E  K W++++V+ R    N+G+ +FVLHDGPPYANGN+HMGHA+NKI KD
Sbjct: 1   MRGNLPVREAERQKAWEENKVYERRQKLNEGKPSFVLHDGPPYANGNIHMGHAMNKISKD 60

Query: 178 IINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVK 237
           II R K +  ++  YVPGWD HGLPIE ++ ++  +  +K LT +  R K  ++A   V+
Sbjct: 61  IIVRSKSMMGFRAPYVPGWDTHGLPIEQQLKKAGVD--RKTLTVADFREKCREYALKQVE 118

Query: 238 AQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTAL 297
            Q   FKR G+  +W+NPYLTL PE+EAAQI VFG+M+ +G IY+G +PV+WS SS +AL
Sbjct: 119 GQKKDFKRLGIAGEWDNPYLTLHPEFEAAQIRVFGKMAEKGLIYKGLRPVYWSWSSESAL 178

Query: 298 AEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAV 357
           AEAE+EY +     + Y V           G+L+    +  L VWTTTPWT+PA+  V V
Sbjct: 179 AEAEVEYHDVVSPSAFYGV-----QVKDGKGVLD---TNTYLVVWTTTPWTIPASEGVTV 230

Query: 358 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-L 416
           +AK  YAVV+     EGD                D+K    ++A++LV     ++G K  
Sbjct: 231 DAKFDYAVVKP----EGD----------------DRK---FVLAAELVKENAERFGWKNY 267

Query: 417 VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 476
            + +TL G+DLE     HP  + +  + + GD++T ++GTGLVHTAPG+G +DY   +KY
Sbjct: 268 EVLETLKGADLEYVTARHPFYDDKELLTMIGDFVTLDAGTGLVHTAPGYGDDDYKVGMKY 327

Query: 477 GLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWR 535
           GLPI +PV+D+G  T++ G  F+G+    D N   +K L+E   L+ +  YEH YP+DWR
Sbjct: 328 GLPIYAPVNDQGYLTDDCGPDFAGV-FYDDANEVSLKKLEEANVLLKQMDYEHSYPFDWR 386

Query: 536 TKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           TKKP IFRAT QWFASV+  R   +DAI +VK++P
Sbjct: 387 TKKPIIFRATPQWFASVDKIRSEILDAIDEVKFLP 421



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 97/167 (58%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GA+++RLWV SVD + DV +      Q+S+ YRK R T+R++L N  D+  
Sbjct: 592 VPSEVVDKMGAEIIRLWVLSVDTSADVRVSMDSFSQISESYRKFRNTMRFMLANTTDFDP 651

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N+++YDDL   D+Y         K I + Y +Y F  I++ +  F+  +LS FY DVA
Sbjct: 652 AENTVAYDDLEACDKYMEVLANKFTKEILDDYANYNFMDIYKKLINFLTTELSAFYLDVA 711

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RRS QTVL   L+ + +++ P+LPH  E++W+ L
Sbjct: 712 KDVVYVEAEDSHKRRSMQTVLYDVLVRLTKLMTPVLPHTTEEIWEYL 758


>gi|227529019|ref|ZP_03959068.1| isoleucine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227351031|gb|EEJ41322.1| isoleucine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 931

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 213/469 (45%), Positives = 291/469 (62%), Gaps = 38/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR    V E +   +W++++V+      N+G+  F+LHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFPMRGKLPVTEAQRESVWEENKVYELRQKLNEGKPTFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHA+NKI KD I RYK +  ++  YVPGWD HGLPIE ++ ++  +  K  LT  +
Sbjct: 62  NIHIGHAMNKISKDFIVRYKSMSGFRSPYVPGWDTHGLPIEHQLTKAGYDRKKMSLT--E 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    K+A   V  Q   FKR GV  DWN+PYLTLD E+EAAQI VFG+ + +G +Y+ 
Sbjct: 120 FRDLCRKYALEQVDKQRKDFKRLGVSGDWNHPYLTLDKEFEAAQIRVFGEFAKKGLLYQA 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY   H   +  A F  V       G+L+    D  L VWT
Sbjct: 180 KKPVYWSWSSESALAEAEVEY---HDVTAKTAFF--VEQVKDGKGVLDS---DTYLVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWTVPA+ AVAVNAK  Y+VV+           PAN          D +K   +VA++
Sbjct: 232 TTPWTVPASEAVAVNAKFDYSVVK-----------PAN----------DDRK--FVVATE 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  L  K G     + K +AG DLE     HP  +R+  V +  DY+T ++GTGLVHTA
Sbjct: 269 LLEGLAEKLGWDDYQVVKHVAGKDLEGLTTQHPYLDRELLVGV-ADYVTADAGTGLVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G +DY    KY LPI +P++D+G  T+E G  F G+      ++++ K L++  +L+
Sbjct: 328 PGYGDDDYNFGKKYDLPIFAPINDQGVLTKENGDDFDGVFYQKADDISLQK-LEDNNALL 386

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +EEP +H YP+DWRTKKP IFRAT+QWF S+E  RQ  +DA+  VK+ P
Sbjct: 387 LEEPLKHSYPFDWRTKKPIIFRATDQWFVSIEKMRQNILDALENVKYHP 435



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D+    N++SY+ 
Sbjct: 615 GAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFNASENTVSYEY 674

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +DQY L +L + ++ +R  +++Y F   ++++  F+  DLS FY +VAKD LY    
Sbjct: 675 MSSVDQYMLVKLNHFLEKMRADFDNYDFLDAYRLLINFVNNDLSAFYMNVAKDVLYIEPE 734

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S TRRS QTV    LL++V+++ PILPH  E+VW
Sbjct: 735 NSQTRRSMQTVFYDILLTMVKLLTPILPHTTEEVW 769


>gi|46852147|ref|NP_060530.3| isoleucine--tRNA ligase, mitochondrial precursor [Homo sapiens]
 gi|94730583|sp|Q9NSE4.2|SYIM_HUMAN RecName: Full=Isoleucine--tRNA ligase, mitochondrial; AltName:
           Full=Isoleucyl-tRNA synthetase; Short=IleRS; Flags:
           Precursor
 gi|33112162|gb|AAP94033.1| isoleucine tRNA synthetase [Homo sapiens]
 gi|119613711|gb|EAW93305.1| isoleucine-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|187952611|gb|AAI37439.1| Isoleucyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
          Length = 1012

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 202/471 (42%), Positives = 287/471 (60%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+T+F M+     +   E EI +     +++    ++     F LHDGPPY
Sbjct: 58  GRYRDTVLLPQTSFPMKLLGRQQPDTELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ ++   K+ +VPGWDCHGLPIE+KVL  L  +A+ +L+
Sbjct: 118 ANGDPHVGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSELGREAQ-NLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +
Sbjct: 177 AMEIRKKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++   P + + 
Sbjct: 237 YRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSIL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN AV    + +YAVV               K S+ G++         ++
Sbjct: 296 VWTTQPWTIPANEAVCYMPESKYAVV---------------KCSKSGDLY--------VL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A+D V ++ +   T      TL+G DLEN    HP+   +   ++  +++T   GTGLVH
Sbjct: 333 AADKVASVASTLETTFETISTLSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ EE   H YPYDWRTKKP + RA++QWF ++   + AA + + +VK++P
Sbjct: 453 LLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIP 503



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/189 (44%), Positives = 112/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 749 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 808

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809 EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 863 WISTSSIWK 871


>gi|157960911|ref|YP_001500945.1| isoleucyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189082333|sp|A8H1H3.1|SYI_SHEPA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|157845911|gb|ABV86410.1| isoleucyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 940

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 197/470 (41%), Positives = 293/470 (62%), Gaps = 30/470 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVAD-KNDGENFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W ++ ++ ++ + + D + F+LHDGPPYANG+
Sbjct: 4   YKSTLNLPETEFPMRGNLANREPEMLKSWTENGLYQQIRESRKDAKPFILHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH++NKILKDII + K +  +   Y+PGWDCHGLPIELKV Q + +   K +T ++ 
Sbjct: 64  IHIGHSVNKILKDIIIKSKTMSGFDAPYIPGWDCHGLPIELKVEQKVGKPGHK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V  Q   F R GV+ADW NPYLT+D   EA  +    ++   G++++G 
Sbjct: 123 RQKCREYAAKQVDGQRDDFIRLGVFADWQNPYLTMDYSTEANIVRSLSKVIDNGHLHKGV 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL-LNEFLPDLGLAVWT 343
           KPVHW     +ALAEAE+EY E  +S +I   F +V  P   +   +NE+  ++ + +WT
Sbjct: 183 KPVHWCTDCGSALAEAEVEY-EDKMSPAIDVAFTVVDKPALLAKFGVNEYPHNISMVIWT 241

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+AV A ++Y +VE+  + EG + A                   +++A+D
Sbjct: 242 TTPWTLPANRALAVGANVEYTLVEM--VKEGQAQA-------------------LVLATD 280

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L  +   ++G +   +  T+AGSDLE  R+ HP  +   PV++ GD++T +SGTG+VHTA
Sbjct: 281 LYESCVERFGAESHTVLGTVAGSDLELLRFNHPFYDFDVPVIL-GDHVTVDSGTGVVHTA 339

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHGQ+D+V   KYGL + +PV D G +  +   F+GL V    N  VV+ L+E+ +L+ 
Sbjct: 340 PGHGQDDFVVGQKYGLEVANPVGDNGVYKPDTEIFAGLHVF-KANKNVVELLEEKGALLN 398

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
               +H YP+ WR K P IFRAT QWF S++  G RQ A+  I Q +W+P
Sbjct: 399 HVQIKHSYPHCWRHKTPIIFRATPQWFISMDQKGLRQQALGEIEQTQWIP 448



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 120/206 (58%), Gaps = 11/206 (5%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    ++G V  + PQ      GAD+LRLWV++ DY+G++ +  Q+L + +D Y
Sbjct: 598 TVDGQGRKMSKSVGNV--IAPQHVTNKLGADILRLWVAATDYSGEMTVSDQILNRSADAY 655

Query: 610 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL N++ +    + ++ +D+  +D++ + +   + + + E+Y+ Y F  + 
Sbjct: 656 RRIRNTARFLLANINGFNPETDMVAVEDMVALDRWVVRRAAALQQELLEAYDQYNFHLVT 715

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + +F  V+L +FY D+ KDR YT    S  RRSCQ+ L     ++VR IAPIL   A+
Sbjct: 716 QKLMQFCSVELGSFYLDIIKDRQYTAKEDSNARRSCQSALYLISEAMVRWIAPILSFTAD 775

Query: 729 DVWQNLPFAYTLEDGSAAEFVFESKW 754
           ++W+ LP       G   E+VF   W
Sbjct: 776 EIWKLLP-------GERGEYVFTETW 794


>gi|109018264|ref|XP_001099877.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Macaca
           mulatta]
          Length = 986

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/471 (43%), Positives = 285/471 (60%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRA---NALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+T+F M+        +E EI +     +++    ++     F LHDGPPY
Sbjct: 58  GRYRDTVLLPRTSFPMKLLGRQQPDKELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ ++   KV +VPGWDCHGLPIE+KVL  L  +A+ +L+
Sbjct: 118 ANGDPHVGHALNKILKDIANRFHMMSGSKVHFVPGWDCHGLPIEIKVLSELGREAQ-NLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +
Sbjct: 177 AMEIREKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++   P +   
Sbjct: 237 YRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSFL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN AV    + +YAVV               K S+ G++         ++
Sbjct: 296 VWTTQPWTIPANEAVCYMPESKYAVV---------------KCSKSGDLY--------VL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A+D V T+ +   T      T +G DLEN    HP+   +   ++  +++T   GTGLVH
Sbjct: 333 AADKVETVASTLETAFETISTFSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ EE   H YPYDWRTKKP + RA++QWF ++   + AA + + +VK++P
Sbjct: 453 LLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIKIAAKELLKKVKFIP 503



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/157 (43%), Positives = 93/157 (59%), Gaps = 7/157 (4%)

Query: 607 DIYRKLRGTLRYLLGNLHDWRV-GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFF 665
           D   KLR TLR+LLGN+ D+    +SI  +D+ +IDQY L  L+++   I E Y+ Y F 
Sbjct: 695 DDISKLRNTLRFLLGNVADFNPETDSIPVNDMYVIDQYMLHLLQDLANKITELYKQYDFG 754

Query: 666 KIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPH 725
           K+ ++++ F   +LS+FYF + KDRLY        RRSCQT L   L  IVR  APILPH
Sbjct: 755 KVVRLLRTFYTRELSHFYFSIIKDRLYCEKENDPRRRSCQTALVEILDVIVRSFAPILPH 814

Query: 726 LAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWR 762
           LAE+V+Q++P  Y  E  S    VF + W      W+
Sbjct: 815 LAEEVFQHIP--YIKEPKS----VFRTGWISTSSIWK 845


>gi|380814548|gb|AFE79148.1| isoleucyl-tRNA synthetase, mitochondrial precursor [Macaca mulatta]
          Length = 1012

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/471 (43%), Positives = 285/471 (60%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRA---NALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+T+F M+        +E EI +     +++    ++     F LHDGPPY
Sbjct: 58  GRYRDTVLLPRTSFPMKLLGRQQPDKELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ ++   KV +VPGWDCHGLPIE+KVL  L  +A+ +L+
Sbjct: 118 ANGDPHVGHALNKILKDIANRFHMMSGSKVHFVPGWDCHGLPIEIKVLSELGREAQ-NLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +
Sbjct: 177 AMEIREKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++   P +   
Sbjct: 237 YRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSFL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN AV    + +YAVV               K S+ G++         ++
Sbjct: 296 VWTTQPWTIPANEAVCYMPESKYAVV---------------KCSKSGDLY--------VL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A+D V T+ +   T      T +G DLEN    HP+   +   ++  +++T   GTGLVH
Sbjct: 333 AADKVETVASTLETAFETISTFSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ EE   H YPYDWRTKKP + RA++QWF ++   + AA + + +VK++P
Sbjct: 453 LLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIKIAAKELLKKVKFIP 503



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 84/189 (44%), Positives = 112/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 749 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYC 808

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809 EKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 863 WISTSSIWK 871


>gi|332231893|ref|XP_003265129.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Nomascus
           leucogenys]
          Length = 1012

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 201/471 (42%), Positives = 286/471 (60%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+T+F M+     +   E EI +     +++    ++     F LHDGPPY
Sbjct: 58  GRYRDTVLLPQTSFPMKLLGRQQPDTELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ ++   K+ +VPGWDCHGLPIE+KVL  L  +A+ +L+
Sbjct: 118 ANGDAHVGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSELGREAQ-NLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +
Sbjct: 177 AVEIREKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++   P + + 
Sbjct: 237 YRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSIL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN AV    + +YAVV               K S+ G++         ++
Sbjct: 296 VWTTQPWTIPANEAVCYMPESKYAVV---------------KCSKSGDLY--------VL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A+D V ++ +   T      T +G DLEN    HP+   +   ++  +++T   GTGLVH
Sbjct: 333 AADKVASVASTLETTFETMSTFSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ EE   H YPYDWRTKKP + RA++QWF ++   + AA + + +VK++P
Sbjct: 453 LLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAARELLKKVKFIP 503



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/189 (44%), Positives = 112/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689 PPYGADVLRWWVADSNVFTEVTIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 749 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 808

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809 EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 863 WISTSSIWK 871


>gi|291402374|ref|XP_002717549.1| PREDICTED: mitochondrial isoleucine tRNA synthetase [Oryctolagus
           cuniculus]
          Length = 1012

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/473 (42%), Positives = 284/473 (60%), Gaps = 29/473 (6%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGP 158
           E GRY+ TV LP+T+F M+     +   E E+ +     +++    ++     F LHDGP
Sbjct: 56  ESGRYRGTVLLPQTSFPMKRLGRQQPDTELELQQKCGFAELYSWQRERKVKTEFCLHDGP 115

Query: 159 PYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKD 218
           PYANG+ H+GHALNKILKDI NRY +++  KV +VPGWDCHGLPIE+KVL  L   ++ +
Sbjct: 116 PYANGDPHVGHALNKILKDIANRYHMMRGSKVHFVPGWDCHGLPIEIKVLSELGGKSQ-N 174

Query: 219 LTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQG 278
           L+  ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+ +F QM  +G
Sbjct: 175 LSALEIREKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTYDAKYEAKQLRIFYQMYDKG 234

Query: 279 YIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG 338
            +YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++  PP  + L++   P + 
Sbjct: 235 LVYRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPPPKLASLIDTSSP-VS 293

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
              WTT PWT+PAN AV    + +YA+V               K S+ G++         
Sbjct: 294 FLAWTTQPWTIPANQAVCYMPESKYALV---------------KCSKSGDLY-------- 330

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           I+A + V ++ +   T   I  T  G DLEN    HP+   +   ++  +++T   GTGL
Sbjct: 331 ILAEEKVASVASTLETTFEIISTFPGGDLENGSCSHPLIPDKVSPLLPANHVTMAKGTGL 390

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQ 517
           VHTAP HG EDY  + ++ LP+   VD++G FTE AG +     VL +G  AV+K L   
Sbjct: 391 VHTAPAHGLEDYSVASQHKLPVDCLVDEDGIFTEGAGPELQNKAVLDEGTDAVIKMLQTT 450

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             L+ EE   H YPYDWRTKKP + RA++QWF ++   +  A + +  VK++P
Sbjct: 451 KHLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINISDIKTTAKELLKTVKFIP 503



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 85/189 (44%), Positives = 112/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP  L    D   KLR TLR+LLGNL  +    +S+ 
Sbjct: 689 PPYGADVLRWWVAESNVFTEVTIGPSALSAARDDISKLRNTLRFLLGNLAGFNPETDSVP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            D++ +IDQY L  L+++   I ESY+ Y F K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 749 VDNMYVIDQYMLHLLQDLASKISESYKQYDFGKVIRLLQAFYTRELSNFYFSIIKDRLYC 808

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L+  L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809 EDENDPKRRSCQTALAKILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 863 WISTSSIWK 871


>gi|386811898|ref|ZP_10099123.1| isoleucyl-tRNA synthase [planctomycete KSU-1]
 gi|386404168|dbj|GAB62004.1| isoleucyl-tRNA synthase [planctomycete KSU-1]
          Length = 935

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/469 (43%), Positives = 286/469 (60%), Gaps = 28/469 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T++LP T F M+AN L +EPEI K W+  Q++  V     G E ++LHDGPPY  G 
Sbjct: 3   YKKTLNLPTTKFPMKANLLEKEPEIQKKWEKEQLYKEVRKARAGKEKYILHDGPPYPTGE 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+G  LNKILKD I R+  ++ Y   YVPGWDCHGLPIE +V+Q +  + K +LT  ++
Sbjct: 63  LHIGTGLNKILKDFIVRFYTMRGYDAPYVPGWDCHGLPIEHRVMQEVGAEIK-NLTKPEI 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  K+A+  VK Q   FK  GV  DW +PYLT +P+YEA  IEVF ++  +G IYR +
Sbjct: 122 RKKCKKYAEKFVKLQKEQFKALGVMGDWEHPYLTFNPQYEAGVIEVFEKLVKRGCIYRSQ 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD-LGLAVWT 343
           KP+HW    +TALAEAELEY     S SIY  F++       + LL     D L + +WT
Sbjct: 182 KPIHWCTRCQTALAEAELEY-RNETSPSIYVNFKITDN--GVNDLLKGIDNDALYVMIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN AVA++++ +YA +   +        P   K +  ++L D++  F++    
Sbjct: 239 TTPWTLPANLAVALHSEYEYAAIRYMN--------PRTHK-KEVSILADKRVEFVM---- 285

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
              +L    G + + K  + G  LE  +Y HP   R   +V+   Y+T   GTG VH AP
Sbjct: 286 ---SLLGIQGYEYLGK--VHGGVLEGIKYQHPFLKRVGSIVLAS-YVTLSDGTGCVHIAP 339

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHGQEDY+T +KY LP LSPV+  G FT+EAG+F+G ++  +GN +++K L++   L  +
Sbjct: 340 GHGQEDYLTGIKYQLPPLSPVNAVGIFTDEAGEFAGQNI-KEGNTSIIKKLEDAGILFYK 398

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             + H YP+ WR K P IFRATEQWF +++    RQ  ++ I Q +W+P
Sbjct: 399 TDFTHSYPHCWRCKDPVIFRATEQWFVNLDHNNLRQRILEEIKQAQWIP 447



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 68/156 (43%), Positives = 106/156 (67%), Gaps = 1/156 (0%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           +GAD+LRLW SS+DY  D+ +   ++ + SD YR++R T RYLL NL+D+    N+ SY+
Sbjct: 627 FGADILRLWTSSMDYQNDMNVSHNLIVRCSDAYRRIRNTFRYLLSNLYDFDPKVNTTSYE 686

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  ID++AL + + ++K++  +YES+QF ++F  I  F  V++S FY D+ KDRLYT  
Sbjct: 687 ELLEIDRWALHKTQELIKDVTSAYESFQFHRVFHNIYNFCTVEMSAFYLDILKDRLYTFA 746

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
             S  RR+ QTV+   L ++V++ API+ H AE+ W
Sbjct: 747 QNSKERRAAQTVIYYILPNLVKLSAPIIVHTAEEAW 782


>gi|295696445|ref|YP_003589683.1| isoleucyl-tRNA synthetase [Kyrpidia tusciae DSM 2912]
 gi|295412047|gb|ADG06539.1| isoleucyl-tRNA synthetase [Kyrpidia tusciae DSM 2912]
          Length = 928

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/472 (43%), Positives = 280/472 (59%), Gaps = 44/472 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y HT+ LPKT F M+ N   REPEI + WD+  ++ R  +   G   F+LHDGPPYANGN
Sbjct: 3   YSHTLHLPKTDFPMKGNLPKREPEIQRRWDEIGLYRRSVEMRRGRPKFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKD+I ++K +  ++  YVPGWD HGLPIE  +++S + + + ++   + 
Sbjct: 63  IHVGHALNKILKDMIVKFKTMDGFEAPYVPGWDTHGLPIEHAIIKSKNLN-RHEIDVLEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   +  Q   FKR GV  DW++PY+TL+P YEA QI VFG+M+ +GYIY+G 
Sbjct: 122 REMCRQYALEYIDRQRGQFKRLGVRGDWDHPYMTLEPGYEAVQIRVFGEMAKKGYIYQGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSA-----PPSTSGLLNEFLPDLGL 339
           KPV+W PS  TALAEAE+EY +  VS SIY  F +V       P  TS           +
Sbjct: 182 KPVYWCPSCETALAEAEIEYRD-KVSPSIYVKFPVVDGQGVVDPAGTS-----------V 229

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+ AN AVA+    +Y +VE+       S      K R  +VLK   +    
Sbjct: 230 VIWTTTPWTLVANQAVALGPDFRYVLVEV------GSERWVVAKDRLTHVLKAAGR---- 279

Query: 400 VASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPV-DNRQCPVVIGGDYITTESGTGL 458
                    +   G  L   K  AG  LE     HP    R+ PVV+G D++T ++GTG 
Sbjct: 280 ---------DPDAGRVL---KEFAGRALEGAILQHPFHKGRRAPVVLG-DHVTLDAGTGA 326

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQM 518
           VHTAPGHG EDY+  LKY LPI +P+DD G+FT EAG+          N  +   L  + 
Sbjct: 327 VHTAPGHGMEDYLVGLKYHLPIEAPIDDRGRFT-EAGQPVAGQFYAKANDVLCDLLRREG 385

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           S++ E    H+YP+ WR K P IFRATEQWFAS++ FRQ  +D I +V+W+P
Sbjct: 386 SMVAEGEIRHQYPHCWRCKNPVIFRATEQWFASIDKFRQEMLDEIEKVQWIP 437



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 10/201 (4%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWV+SVDY  D  +   +L+Q++++YRK+R T R+LLGNL+ +    +  SY+ 
Sbjct: 617 GADILRLWVASVDYRSDARVSDAILKQVAEVYRKIRNTFRFLLGNLNGFDPAAHRTSYEH 676

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +D++AL QL+ +V+    +Y +Y+F  +F  +  F  V +S FY DV KDRLY    
Sbjct: 677 MTELDRWALDQLQRLVERTSAAYRNYEFHLVFHAVHNFCAVQMSAFYLDVLKDRLYCSRE 736

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 756
               RRS QT +   L+++V+++API+ H A++VW  +P       G +A+      WP 
Sbjct: 737 ADPIRRSAQTAMYEILVTLVKLVAPIISHTADEVWGYIPGV----KGPSAQL---EDWPQ 789

Query: 757 LDEKWRTFPVGEIYFWGKILE 777
           +  +W+   +  +  W +ILE
Sbjct: 790 VRSEWKDDAL--MRKWERILE 808


>gi|426333832|ref|XP_004028473.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Gorilla gorilla
           gorilla]
          Length = 1012

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 202/471 (42%), Positives = 287/471 (60%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+T+F M+     +   E EI +     +++    ++     F LHDGPPY
Sbjct: 58  GRYRDTVLLPQTSFPMKLLGRQQPDTELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ ++   K+ +VPGWDCHGLPIE+KVL  L  +A+ +L+
Sbjct: 118 ANGDPHVGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSELGREAQ-NLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +
Sbjct: 177 AMEIRKKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++   P + + 
Sbjct: 237 YRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLAPLIDGSSP-VSIL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN AV    + +YAVV               K S+ G++         ++
Sbjct: 296 VWTTQPWTIPANEAVCYMPESKYAVV---------------KCSKSGDLY--------VL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A+D V ++ +   T      TL+G DLEN    HP+   +   ++  +++T   GTGLVH
Sbjct: 333 AADKVASVASTLETTFETISTLSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ EE   H YPYDWRTKKP + RA++QWF ++   + AA + + +VK++P
Sbjct: 453 LLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIP 503



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 85/189 (44%), Positives = 112/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNMADFNPETDSIP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 749 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 808

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809 EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 863 WISTSSIWK 871


>gi|46908248|ref|YP_014637.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|226224616|ref|YP_002758723.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|254825490|ref|ZP_05230491.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254854377|ref|ZP_05243725.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931813|ref|ZP_05265172.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254993251|ref|ZP_05275441.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|255521953|ref|ZP_05389190.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300763676|ref|ZP_07073673.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|386732756|ref|YP_006206252.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 07PF0776]
 gi|404281624|ref|YP_006682522.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2755]
 gi|404287442|ref|YP_006694028.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 7 str.
           SLCC2482]
 gi|405750366|ref|YP_006673832.1| isoleucyl-tRNA synthetase [Listeria monocytogenes ATCC 19117]
 gi|405753239|ref|YP_006676704.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2378]
 gi|405756172|ref|YP_006679636.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2540]
 gi|406704797|ref|YP_006755151.1| isoleucyl-tRNA synthetase [Listeria monocytogenes L312]
 gi|417315656|ref|ZP_12102332.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J1816]
 gi|424714889|ref|YP_007015604.1| Isoleucine--tRNA ligase [Listeria monocytogenes serotype 4b str.
           LL195]
 gi|424823772|ref|ZP_18248785.1| Isoleucyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
 gi|81403188|sp|Q71Y01.1|SYI_LISMF RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|259511508|sp|C1KWW3.1|SYI_LISMC RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|46881519|gb|AAT04814.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|225877078|emb|CAS05789.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258607776|gb|EEW20384.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583367|gb|EFF95399.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293594732|gb|EFG02493.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300515412|gb|EFK42462.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328466360|gb|EGF37517.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J1816]
 gi|332312452|gb|EGJ25547.1| Isoleucyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
 gi|384391514|gb|AFH80584.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 07PF0776]
 gi|404219566|emb|CBY70930.1| isoleucyl-tRNA synthetase [Listeria monocytogenes ATCC 19117]
 gi|404222439|emb|CBY73802.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2378]
 gi|404225372|emb|CBY76734.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2540]
 gi|404228259|emb|CBY49664.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2755]
 gi|404246371|emb|CBY04596.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 7 str.
           SLCC2482]
 gi|406361827|emb|CBY68100.1| isoleucyl-tRNA synthetase [Listeria monocytogenes L312]
 gi|424014073|emb|CCO64613.1| Isoleucine--tRNA ligase [Listeria monocytogenes serotype 4b str.
           LL195]
          Length = 921

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/468 (44%), Positives = 288/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN G   ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAGRKAYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            LHMGHALNK +KDII RYK +  +   YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  ELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEYQDKK-SASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P+L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L +L+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 115/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNAVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L ++VKN++++YE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDNYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSL 769


>gi|94730584|sp|Q4R646.2|SYIM_MACFA RecName: Full=Isoleucine--tRNA ligase, mitochondrial; AltName:
           Full=Isoleucyl-tRNA synthetase; Short=IleRS; Flags:
           Precursor
          Length = 993

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/471 (43%), Positives = 285/471 (60%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRA---NALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+T+F M+        +E EI +     +++    ++     F LHDGPPY
Sbjct: 39  GRYRDTVLLPQTSFPMKLLGRQQPDKELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 98

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ ++   KV +VPGWDCHGLPIE+KVL  L  +A+ +L+
Sbjct: 99  ANGDPHVGHALNKILKDIANRFHMMSGSKVHFVPGWDCHGLPIEIKVLSELGREAQ-NLS 157

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +
Sbjct: 158 AMEIREKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLV 217

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++   P +   
Sbjct: 218 YRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSFL 276

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN AV    + +YAVV               K S+ G++         ++
Sbjct: 277 VWTTQPWTIPANEAVCYMPESKYAVV---------------KCSKSGDLY--------VL 313

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A+D V T+ +   T      T +G DLEN    HP+   +   ++  +++T   GTGLVH
Sbjct: 314 AADKVETVASTLETAFETISTFSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVH 373

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V+K L    +
Sbjct: 374 TAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKN 433

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ EE   H YPYDWRTKKP + RA++QWF ++   + AA + + +VK++P
Sbjct: 434 LLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIKIAAKELLKKVKFIP 484



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 84/189 (44%), Positives = 112/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 670 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 729

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 730 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYC 789

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 790 EKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 843

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 844 WISTSSIWK 852


>gi|47093189|ref|ZP_00230963.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|47018440|gb|EAL09199.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           H7858]
          Length = 921

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/468 (44%), Positives = 288/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN G   ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAGRKAYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            LHMGHALNK +KDII RYK +  +   YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  ELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEYQDKK-SASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P+L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L +L+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEVLAPLDDHGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 115/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNAVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L ++VKN++++YE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDNYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSL 769


>gi|365904412|ref|ZP_09442171.1| isoleucyl-tRNA synthetase [Lactobacillus versmoldensis KCTC 3814]
          Length = 926

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/468 (44%), Positives = 285/468 (60%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N   +E E  K W D++V+ +    N+G+  F L DGPP+ANG
Sbjct: 2   RVKDTLNLGKTKFPMRGNLPNKESEWEKDWLDNKVYEKRQKLNEGKPTFELLDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K++  S+
Sbjct: 62  DIHMGHALNKISKDIIVRYKSMNGFRSPYVPGWDTHGLPIEQQLAKKGVK--RKEIGMSE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    KFA+  +K QM  FKR GV ADW+NPY+T  PE+E  +++VFG+M  +GYIYRG
Sbjct: 120 YRKMCQKFAEKEIKKQMDGFKRLGVSADWDNPYITYQPEFEKEEVKVFGEMVDKGYIYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS + LAEAE+EY +   S SI+  F++         LL+    D    +WT
Sbjct: 180 KKPVYWSPSSESTLAEAEIEYKDIK-SPSIFVAFKVRDG----KDLLDN---DTSFIIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P+N A+ VN K  Y  V+I +                     D KK   +VA D
Sbjct: 232 TTPWTIPSNEAICVNPKFDY--VQINA---------------------DGKKY--VVAED 266

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
            +  L+   G + V I K   G+DLE     HP+ + Q  ++I G+++T + GTGLVHTA
Sbjct: 267 RISFLKETLGWENVEILKEFKGTDLEGLTATHPLYD-QASLLILGNHVTLDDGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PG G +D+V  +KY LPI SP+D  G FT+E  ++ G+      N  +   + E  SL+ 
Sbjct: 326 PGFGADDFVVGMKYKLPIFSPIDAHGCFTDEIPEYKGV-FYDKANKMITDRMKENGSLLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              + H YP+DWRTKKP IFRAT QWFAS++GFRQ  +D +  V ++P
Sbjct: 385 LNFFTHSYPHDWRTKKPVIFRATPQWFASIDGFRQQVLDQLENVDFIP 432



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 99/159 (62%), Gaps = 1/159 (0%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           +GA+++RLWV+SV+ + DV +     +Q S+ YRK+R T+R++L N  D+    N + Y+
Sbjct: 611 FGAEIIRLWVASVNSSSDVSVSVDSFKQTSEAYRKIRNTIRFMLANTTDFDPKDNRVVYN 670

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           DL   D+Y + +L  ++ N++  Y+ Y F  + + + +F+  ++S FY D AKD +Y   
Sbjct: 671 DLRPEDKYIVMKLNELITNVKADYDKYDFANVNKSVLKFLTNEMSTFYLDFAKDVVYIDA 730

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
             S +RRS QTV+    ++I +++ PILPH  E V++ L
Sbjct: 731 EDSHSRRSMQTVIYDAAVAISKLLTPILPHTMEQVFEYL 769


>gi|420143358|ref|ZP_14650859.1| Isoleucine--tRNA ligase (Isoleucyl-tRNA synthetase) [Lactococcus
           garvieae IPLA 31405]
 gi|391856877|gb|EIT67413.1| Isoleucine--tRNA ligase (Isoleucyl-tRNA synthetase) [Lactococcus
           garvieae IPLA 31405]
          Length = 928

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/469 (43%), Positives = 291/469 (62%), Gaps = 39/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MRA    +E    K W++ +++      N+G+ +F+LHDGPPYANG
Sbjct: 2   KIKDTLNLGKTAFPMRAGLPNKESGWQKGWEEAKLYEARQALNEGKPSFMLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ ++     +K++    
Sbjct: 62  NIHVGHALNKISKDIIVRYKSMSGFRAPYVPGWDTHGLPIEQQLSKA--GMNRKEMDMLD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              +  K+A   V  Q + FK  GV ADW  PY+TL PEYEAAQI VFG+M+ +GYIY+G
Sbjct: 120 YLEECRKYALKQVDMQRSDFKSLGVLADWERPYMTLLPEYEAAQIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           +KP++WSPSS ++LAEAE+EY +   S SI+  F+         G L E   D+   +WT
Sbjct: 180 QKPIYWSPSSESSLAEAEIEYQDVR-SASIFVAFK----AKDVKGRLPE---DVEFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + V+   +Y+VV++ S                        + F+I +  
Sbjct: 232 TTPWTLPANMGIFVHPDYEYSVVKVGS------------------------RKFVIASEM 267

Query: 404 LVPTLEA-KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L    E  +W    V+ +TL GSD++     HP  +R+  +++ GDY+T +SGTGLVH+A
Sbjct: 268 LSKVAEILEWENPTVL-QTLKGSDMDMMTAHHPFYDRES-LIMNGDYVTLDSGTGLVHSA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY  S KY L +LSPVD+ G +T+EA    G+    +GN  V K+L+E+ +L+ 
Sbjct: 326 PGHGEDDYFFSRKYKLEVLSPVDNRGYYTDEAPGLEGV-FYDEGNKIVSKWLEEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
            + + H YP+DWRTKKP IFRAT QWFAS++ FR+  +  I QV W+ P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIFRATPQWFASIDDFRENILSEIEQVDWIIP 433



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 116/188 (61%), Gaps = 7/188 (3%)

Query: 569 VPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW- 626
           + P +  G  GAD+LRLWV+SVD   DV +  ++L Q+S++YRK+R T+R+L+ N  D+ 
Sbjct: 602 ILPSDVTGKLGADILRLWVASVDTEADVRVSMEILNQVSEVYRKIRNTMRFLIANTTDFD 661

Query: 627 RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
           +  N++SY++L  +D+Y L +   +VK +RE+Y+SY F  +++ +  F+  DLS FY D 
Sbjct: 662 KNTNAVSYENLRSVDKYMLVKFNTLVKAVREAYDSYNFMSVYKQVINFLTNDLSAFYLDF 721

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL-----PFAYTLE 741
           AKD +Y     +  RRS QTV+   L  + +++ PILPH AE++W  L      FAY  E
Sbjct: 722 AKDVVYIEAANAADRRSMQTVMYTMLADLTKLLVPILPHTAEEIWSYLEAETEEFAYLAE 781

Query: 742 DGSAAEFV 749
                +F 
Sbjct: 782 MPEVKDFT 789


>gi|397471288|ref|XP_003807228.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Pan paniscus]
          Length = 1012

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 202/471 (42%), Positives = 286/471 (60%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+T+F M+     +   E EI +     +++    ++     F LHDGPPY
Sbjct: 58  GRYRDTVLLPQTSFPMKLLGRQQPDTELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ ++   K+ +VPGWDCHGLPIE+KVL  L  +A+ +L+
Sbjct: 118 ANGDPHVGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSELGREAQ-NLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +
Sbjct: 177 AMEIRKKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++   P + + 
Sbjct: 237 YRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSIL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN AV    + +YAVV               K S+ G++         ++
Sbjct: 296 VWTTQPWTIPANEAVCYMPESKYAVV---------------KCSKSGDLY--------VL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A+D V +  +   T      TL+G DLEN    HP+   +   ++  +++T   GTGLVH
Sbjct: 333 AADKVASAASTLETTFETISTLSGIDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ EE   H YPYDWRTKKP + RA++QWF ++   + AA + + +VK++P
Sbjct: 453 LLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIP 503



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/189 (44%), Positives = 112/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 749 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 808

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L   L  +VR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809 EKENDPKRRSCQTALVEILDVMVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 863 WISTSSIWK 871


>gi|325190727|emb|CCA25221.1| isoleucyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 963

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/460 (45%), Positives = 288/460 (62%), Gaps = 49/460 (10%)

Query: 119 MRANALVREPEIHKLWDDH--QVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILK 176
           MRANA VRE  + K       Q F R  D  +   F+LHDGPP+ANG+LHMGH LNKILK
Sbjct: 1   MRANAAVREVGLQKKCVQQVLQHFAR-PDAQNRPRFLLHDGPPFANGSLHMGHFLNKILK 59

Query: 177 DIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAK--KDLTPSKLRAKAAKFAKA 234
           DII RYKL++ Y+V YVPGWDCHGLPIELK L    E AK  K+L P  +R  + K A  
Sbjct: 60  DIILRYKLMRGYRVEYVPGWDCHGLPIELKAL----EQAKKGKELCPLHIRQTSRKLALE 115

Query: 235 TVKAQMASFKRYGVWADW-NNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSS 293
            +K Q   F+R+GV ADW ++ Y T+DP+YE  Q ++  +M +Q  IYRG KPV+WSPSS
Sbjct: 116 AIKKQKKDFRRWGVLADWESHTYTTMDPQYEVRQYDILKEMLMQDRIYRGFKPVYWSPSS 175

Query: 294 RTALAEAELEYPEGHVSRSIYAVFRMVSAPPST-SGLLNEF-LPDLGLAVWTTTPWTVPA 351
           +TALAE+ELEY + H S++ Y +F +V A  S    LL +F    +   VWTTTPWT+P+
Sbjct: 176 KTALAESELEYFD-HTSQAAYILFPLVEAHSSAFKALLKQFQYEQVACVVWTTTPWTIPS 234

Query: 352 NAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPT---- 407
           N A+ V+ KL+Y++V++                          + ++++A DLV +    
Sbjct: 235 NVALCVDPKLRYSLVKLH-------------------------EKYLLMAEDLVDSFLDV 269

Query: 408 LEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQ 467
           L+   G+++V   T+ GSDL   ++  P+  +   V+I G ++TT+ GTG+VH APGHGQ
Sbjct: 270 LDRPLGSQVV--ATMRGSDLIASKFQQPL-GKNVSVMIPGKHVTTDLGTGIVHIAPGHGQ 326

Query: 468 EDYVTSLKYGL---PILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           EDY+  +++      IL PV+++G+FT EAG +  GL+VL +GN  V++ L+    L+  
Sbjct: 327 EDYIAWMEHQQGTSDILCPVNEDGRFTAEAGPELEGLEVLSEGNTKVLELLENHNQLVKV 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
            PY+H+YPYDWRTKKP I RAT QWFA +E     A+  +
Sbjct: 387 SPYKHRYPYDWRTKKPVILRATAQWFAKLEELHTIALQCL 426



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/194 (42%), Positives = 112/194 (57%), Gaps = 4/194 (2%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGN 630
           Q  P YGADV+R WV++ DYT DV IGP +++++S+  RK+R T R+LLGNL D+    +
Sbjct: 621 QGMPAYGADVIRYWVATTDYTSDVSIGPGIVQKVSEAVRKVRNTARFLLGNLADFHPEKD 680

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           SI Y  +  ID+Y L  L+ +  +   +Y+S+ F ++ QI+  F   DLS FY +  KDR
Sbjct: 681 SIPYASMQSIDKYMLHVLDQVNTSCTAAYDSFAFQRVQQILTNFTASDLSAFYMEACKDR 740

Query: 691 LYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGS-AAEFV 749
           LY     S  RRSCQTVL   L S+   IAP+L H AED+W +    Y   D S   E V
Sbjct: 741 LYCDPAASQRRRSCQTVLHHTLRSLTWSIAPVLCHTAEDIWMHQMAQYQQCDPSDVVESV 800

Query: 750 F--ESKWPVLDEKW 761
           F  E  W      W
Sbjct: 801 FTQEETWHAQPPSW 814


>gi|116873455|ref|YP_850236.1| isoleucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123466497|sp|A0AKC5.1|SYI_LISW6 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|116742333|emb|CAK21457.1| isoleucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 921

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/468 (44%), Positives = 287/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN G   ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNTGRKAYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            LHMGHALNK +KDII RYK +  +   YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  ELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEYQDKK-SASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLPNLREKLGFEDATVVKTVRGSELDRIVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L IL+P+DD G FT+EA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTDEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLKAVKGVNWTP 432



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 114/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV     +++ +++APILPH  E+VW +L
Sbjct: 732 DSNDRRAMQTVFYEAAVTLTKLLAPILPHTTEEVWNSL 769


>gi|392949179|ref|ZP_10314770.1| Isoleucyl-tRNA synthetase [Lactobacillus pentosus KCA1]
 gi|392435594|gb|EIW13527.1| Isoleucyl-tRNA synthetase [Lactobacillus pentosus KCA1]
          Length = 932

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 289/469 (61%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E E   LW +++V+ +    N+G+ +F+LHDGPPYANG
Sbjct: 2   RVKETLNLGKTKFKMRGNLPVKEVERQNLWAENKVYEQRQKLNEGKPSFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKI KD I RYK +  ++  YVPGWD HGLPIE K+ Q+  +  +K ++ ++
Sbjct: 62  DIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHGLPIEQKLKQAGYD--RKKMSDNE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    K+A   V  Q   FKR GV  +W+NPYLTL PE+EAAQ+ VFG    +  IYRG
Sbjct: 120 FRELCRKYALEQVDHQREEFKRLGVSGEWDNPYLTLKPEFEAAQVRVFGAFVKRHLIYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +ALAEAE+EY +     + Y   R++       G+L++   +  + VWT
Sbjct: 180 KKPVFWSWSSESALAEAEVEYHDVTSPSAFYGE-RVIDG----KGVLDD---NTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + V+A   Y VV+           PA +  +             ++A++
Sbjct: 232 TTPWTIPASEGITVDASFDYVVVQ-----------PAGESRK------------FVLAAE 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+     ++G + V + KT+ G+DLEN    HP D+ +  + + GD++T +SGTGLVHTA
Sbjct: 269 LLDENAERFGWEDVQVLKTVKGADLENVLCEHPFDHSRNLLTMLGDFVTLDSGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++DY    KYGLPI +PVD++G  TEE+G  F+G+    D N   +  L +   L+
Sbjct: 329 PGYGEDDYQIGQKYGLPIFAPVDNKGVLTEESGADFAGV-FYDDANKISLDKLKDAGLLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              PYEH YP+DWRTKKP IFRAT QWFASV   R   + +I  V++ P
Sbjct: 388 KYMPYEHSYPFDWRTKKPIIFRATPQWFASVGDMRDEILKSIDDVQFFP 436



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 102/155 (65%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    + ++++D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRFMLGNTTDFDPKKDRVAFED 675

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY   +L + V  I++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMAVRLNDFVAEIKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S +RRS QTV    L+++ ++  P+LPH  E++W
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW 770


>gi|313885240|ref|ZP_07818992.1| isoleucine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619931|gb|EFR31368.1| isoleucine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 929

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/471 (43%), Positives = 287/471 (60%), Gaps = 41/471 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MRAN   +E  +   W +  ++ +V  KN+G+  ++LHDGPPYANG
Sbjct: 2   KLKDTLNLGKTDFAMRANLPKKEVSLQAEWAEADLYNQVQAKNEGKPTWILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            +HMGHALNKI KD I RYK +  ++  YVPGWD HGLPIE  +++S ++  +K+++ + 
Sbjct: 62  QIHMGHALNKITKDFIIRYKSMSGFRSPYVPGWDTHGLPIESALIKS-EKVNRKEMSTAD 120

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V+ Q   F R GV  +W+NPYLTL PEYEA Q+ +FG+M+  GYIY+G
Sbjct: 121 FRRLCEEYALKQVEGQKEDFMRLGVAGEWDNPYLTLKPEYEAQQVRIFGKMAAAGYIYKG 180

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS T+LAEAE+EY +   S S+Y  F ++       G + E   D    +WT
Sbjct: 181 MKPVYWSPSSETSLAEAEVEYHDV-TSPSMYVAFEVLDG----KGRVPE---DAEFVIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+   A   YA+V++           A++K               IVA D
Sbjct: 233 TTPWTIPANLAITAKADATYALVQV-----------ADRK--------------FIVAQD 267

Query: 404 --LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
                  E +W    V+  T  G D E     HP+ +R   +++ GD++T +SGTGLVHT
Sbjct: 268 LLESLAEELEWADYQVL-DTYLGQDFEGMTAKHPLYDRSSLLIV-GDHVTLDSGTGLVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY   LKYGL ILSPVD+ G FT+EA  + G+  L  GN  +++ L++   L+
Sbjct: 326 APGHGEDDYQVGLKYGLDILSPVDNRGHFTDEAPGYEGMFYL-KGNKVILEDLEKAHRLL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQ-VKWVPP 571
                 H YP+DWRTKKP IFRAT QWFAS++ FRQ  +D++ Q V W  P
Sbjct: 385 KVTEITHSYPHDWRTKKPIIFRATPQWFASIDKFRQELLDSVEQDVTWHHP 435



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 113/192 (58%), Gaps = 8/192 (4%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV I  ++L+Q+S+ YRK+R T+R++L N++D+    N + Y +
Sbjct: 614 GADIIRLWVASVDYESDVRISKEILKQISEAYRKIRNTIRFMLSNVNDFDPEKNQVDYQE 673

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L   DQY L +   +V +I E YE Y F  I++ +  F+ VDLS FY D AKD LY    
Sbjct: 674 LRPEDQYLLAKYRVLVNDILEDYERYHFSSIYKNVINFVTVDLSAFYLDFAKDVLYIEAA 733

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP----FAYTLEDGSAAEFVFES 752
               RR+ QTV+   L  +++++ PIL H  E+ W  LP    +    +   A +   E+
Sbjct: 734 DDLNRRAMQTVIYEVLDGLIQLLTPILVHTMEEAWTVLPGKSGYVQLTDLPQAYDLALET 793

Query: 753 KWPVLDEKWRTF 764
               + EKW++F
Sbjct: 794 ---AIIEKWQSF 802


>gi|347727138|gb|AEP19927.1| isoleucyl-tRNA synthetase [Bacillus aquimaris]
          Length = 923

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 214/471 (45%), Positives = 288/471 (61%), Gaps = 45/471 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK T+ +PKT F MR N   REPE  K W++  ++ +V ++  G   FVLHDGPPYANG
Sbjct: 2   EYKDTLLMPKTEFPMRGNLPKREPETQKKWEEMSIYKKVQERTSGRPLFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           N+HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE    Q+L      +K++T 
Sbjct: 62  NIHMGHALNKVLKDFIVRYKSMNGFHAPYVPGWDTHGLPIE----QALTNKGVKRKEMTI 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R    ++A   V  Q   FK+ GV  DW+NPY+TL PEYEA QI+VFG M+ +GYIY
Sbjct: 118 AEFRKLCEEYAYEQVDNQRTQFKQLGVRGDWDNPYITLKPEYEAQQIKVFGDMAKKGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +GKKPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L E      + +
Sbjct: 178 KGKKPVYWSPSSESALAEAEIEYQDKR-SPSIYVGFDITDG----KGVLAE---GTQMII 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN  +AV+  L Y VV                          +K+   +VA
Sbjct: 230 WTTTPWTIPANLGIAVHKDLSYVVVS-------------------------EKEKQYVVA 264

Query: 402 SDLVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
            DL+  +    +W    V KK + G +LE+    HP+ +R+  +VI GD++TT+SGTG V
Sbjct: 265 EDLLEEVAKNLEWEDYSVSKK-VKGEELEHLVAKHPLYDRKS-LVILGDHVTTDSGTGCV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG++D++   KYGL +L PVDD+G  T EA  F GL      N  + + L E  +
Sbjct: 323 HTAPGHGEDDFLVGKKYGLDVLCPVDDKGVMTAEAPGFEGL-FYDKANKPITEKLQEVGA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+      H YP+DWRTKKP IFRAT QWFAS++ FR+  ++A+ + KW+P
Sbjct: 382 LLKLTFITHSYPHDWRTKKPVIFRATAQWFASIDKFRKELLEAVNETKWIP 432



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 122/186 (65%), Gaps = 2/186 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    ++G V  VP +     GAD+LRLWV+SVDY  DV +   +L+Q++++YR
Sbjct: 586 ALDGDGRKMSKSLGNVM-VPEKVMKQLGADILRLWVASVDYQSDVRVSDPILKQVAEVYR 644

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+LLGNL D+    NS+ YD L  +DQ+ L +L ++VKN++ SY+ Y+F  I+ 
Sbjct: 645 KIRNTYRFLLGNLADFDPKSNSVPYDQLREVDQFMLVKLNDLVKNVKSSYDKYEFASIYH 704

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  +DLS+FY D AKD LY     +  RR+ QTVL   L+++ ++++PIL H A++
Sbjct: 705 AVNNFCTLDLSSFYLDFAKDVLYIESENNEERRAMQTVLYECLVALTKLMSPILSHTADE 764

Query: 730 VWQNLP 735
           VW  LP
Sbjct: 765 VWSYLP 770


>gi|422422735|ref|ZP_16499688.1| isoleucine--tRNA ligase [Listeria seeligeri FSL S4-171]
 gi|313637043|gb|EFS02610.1| isoleucine--tRNA ligase [Listeria seeligeri FSL S4-171]
          Length = 921

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/468 (44%), Positives = 288/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN D  +++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNADRPSYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            LHMGHALNK +KDII RYK +  ++  YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  ELHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L    P   + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEYQDKK-SASIFVTFKVTDG----KGVLE---PGTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  L  K G +   I KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLAGLREKLGFEDATILKTVRGSELDCVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L +L+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLVGKKYNLEVLAPLDDRGVFTEEAPGFEGI-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   ++A+  V W P
Sbjct: 385 LEFITHSYPHDWRTKKPVIFRATSQWFASIDAFRDDLLEAVKSVNWTP 432



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 114/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N +SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFEPTTNGVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSAIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSKDRRAMQTVFYESVVTLTKLLAPILPHTTEEVWNSL 769


>gi|409386153|ref|ZP_11238618.1| Isoleucyl-tRNA synthetase [Lactococcus raffinolactis 4877]
 gi|399206563|emb|CCK19533.1| Isoleucyl-tRNA synthetase [Lactococcus raffinolactis 4877]
          Length = 932

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/472 (43%), Positives = 286/472 (60%), Gaps = 45/472 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MRA    +EP++ + WD+  ++     +N+G+ +FVLHDGPPYANG
Sbjct: 2   KIKETLNLGKTAFPMRAGLPNKEPKMQEAWDEANLYAYRLKENEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++H+GHA+NKI KDII RYK +  ++  YVPGWD HGLPIE    Q L +    +K+L  
Sbjct: 62  DIHVGHAMNKISKDIIIRYKNMAGFRAPYVPGWDTHGLPIE----QVLTKKGIKRKELDR 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++       +A   V  Q   FK  GV  DW NPY+TL PE+EAAQI VFGQMS  GYIY
Sbjct: 118 AEYLRMCRDYALTQVDLQRKGFKSLGVLGDWENPYVTLQPEFEAAQIRVFGQMSENGYIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G KP++WSPSS ++LAEAE+EY +   S SIY  F+       T GLL E    +   +
Sbjct: 178 KGAKPIYWSPSSESSLAEAEIEYQDVR-SASIYVAFKAT----DTKGLLPE---GVEFVI 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P+N  +  +    Y +V +                       D++    ++A
Sbjct: 230 WTTTPWTIPSNLGIFAHPDYDYVLVAVN----------------------DRQ---FVIA 264

Query: 402 SDLVPTLEAK--WGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           S+L+ T+  K  W    V+ +T+ GS+L+     HP  +R   +V+  +Y+T +SGTGLV
Sbjct: 265 SELLNTVAEKLEWADYKVL-QTIKGSELDGMVVKHPFYDRDT-LVMNAEYVTLDSGTGLV 322

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           H APGHG++DY  S KY L +LSP+DD G +T+EA    GL    +GN  V ++L+E  +
Sbjct: 323 HVAPGHGEDDYFFSRKYKLGVLSPIDDRGYYTDEAPGLEGL-FYDEGNKKVTEWLEENNA 381

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
           L+  E + H YP+DWRTKKP IFRAT QWFAS++ FR+  +  +  V W+ P
Sbjct: 382 LLKLEFFTHSYPHDWRTKKPVIFRATPQWFASIDKFRENILSEVENVDWIVP 433



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 113/182 (62%), Gaps = 6/182 (3%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW-RV 628
           P      YGAD+LRLWV+SVD T DV +   ++ Q S+ YRK+R TLR+L+ N  D+ + 
Sbjct: 604 PKDVTKQYGADILRLWVASVDNTSDVRVSMDLIGQTSEAYRKIRNTLRFLIANTSDFDKT 663

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            ++++++DL   D+Y L +L  +++++RE+Y+ Y F ++++ I  F+  DLS FY D AK
Sbjct: 664 KDAVAFEDLKGSDKYLLVRLNQVIQSVREAYDRYNFMEVYRTIFNFLTNDLSAFYLDFAK 723

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL-----PFAYTLEDG 743
           D +Y     S  RR  QTV+   L+ + +++ PI+PH AE++W  L      +AY  E  
Sbjct: 724 DIVYIETANSTERRRMQTVMYDVLVKLTKLLVPIVPHTAEEIWTYLEQEEEAYAYLTEMP 783

Query: 744 SA 745
           SA
Sbjct: 784 SA 785


>gi|422419644|ref|ZP_16496599.1| isoleucine--tRNA ligase [Listeria seeligeri FSL N1-067]
 gi|313632514|gb|EFR99522.1| isoleucine--tRNA ligase [Listeria seeligeri FSL N1-067]
          Length = 921

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/468 (44%), Positives = 288/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN D  +++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNADRPSYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            LHMGHALNK +KDII RYK +  ++  YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  ELHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L    P   + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEYQDKK-SASIFVTFKVTDG----KGVLE---PGTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLAGLREKLGFEDATLLKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L +L+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLVGKKYNLEVLAPLDDRGVFTEEAPGFEGI-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   ++A+  V W P
Sbjct: 385 LEFITHSYPHDWRTKKPVIFRATSQWFASIDAFRDDLLEAVKSVNWTP 432



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 114/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N +SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFEPTTNGVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSAIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSKDRRAMQTVFYESVVTLTKLLAPILPHTTEEVWNSL 769


>gi|289435362|ref|YP_003465234.1| hypothetical protein lse_2001 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171606|emb|CBH28152.1| ileS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 921

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/468 (44%), Positives = 289/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN D  +++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNADRPSYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            +HMGHALNK +KDII RYK +  ++  YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  EVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L    P   + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEYQDKK-SASIFVTFKVTDG----KGVLE---PGTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  L  K G +  ++ KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLAGLREKLGFEDAIVLKTVRGSELDRIVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L +L+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLVGKKYNLEVLAPLDDRGVFTEEAPGFEGI-FYDTANKMVTERLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   ++A+  V W P
Sbjct: 385 LEFITHSYPHDWRTKKPVIFRATSQWFASIDAFRDDLLEAVKSVNWTP 432



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 115/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N +SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFEPTTNGVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L+++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLDDLVKNVKDSYEAFEFSAIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSKDRRAMQTVFYESVVTLTKLLAPILPHTTEEVWNSL 769


>gi|47096662|ref|ZP_00234249.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254912578|ref|ZP_05262590.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936904|ref|ZP_05268601.1| isoleucyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|386047671|ref|YP_005966003.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|47014984|gb|EAL05930.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 1/2a
           str. F6854]
 gi|258609502|gb|EEW22110.1| isoleucyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590567|gb|EFF98901.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|345534662|gb|AEO04103.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J0161]
          Length = 921

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/468 (44%), Positives = 289/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN +   ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAERPTYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            +HMGHALNK +KDII RYK +  ++  YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  EVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMKQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P+L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L IL+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 115/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSL 769


>gi|169831567|ref|YP_001717549.1| isoleucyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|254782388|sp|B1I4A3.1|SYI_DESAP RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|169638411|gb|ACA59917.1| isoleucyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 930

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/497 (41%), Positives = 290/497 (58%), Gaps = 45/497 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  T++LP T F MRAN   REPEI + WD+ +V+  V  KN G   F+LHDGPPYANG+
Sbjct: 3   YSKTLNLPTTEFPMRANLPQREPEIGRFWDEIEVYQLVQAKNAGRPKFILHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G +LNKILKDI+ ++K +  Y   YVPGWD HGLPIE + ++ L +  +  L+P + 
Sbjct: 63  IHLGTSLNKILKDIVVKFKSMDGYNAPYVPGWDTHGLPIEQQAIKQL-KIKRSALSPVEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   V  Q A FKR GV  +W+NPYLTL P +E  QIEVFG+M+ +GYIY+G 
Sbjct: 122 RRMCREYALKFVDIQRAEFKRLGVRGEWHNPYLTLQPHFETRQIEVFGEMAKRGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           K V+W     TALAEAE+EY E   S SI+  F +V+      GLL +   D  + +WTT
Sbjct: 182 KSVYWCADCETALAEAEVEYAEKE-SPSIHVAFPVVNG----RGLLPD--QDAAIVIWTT 234

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +  Y +                        L+   + ++ VA DL
Sbjct: 235 TPWTIPSNVAICVHPEYAYVL------------------------LRSGGRAYL-VARDL 269

Query: 405 VPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
                   G     +++   G +LE     HP   R   VV+  DY+T E GTG VH AP
Sbjct: 270 AGNFRELLGDPGAGVEREYRGEELEGVVCRHPFVERDS-VVVLADYVTLEQGTGCVHIAP 328

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED+    +Y LP++SP++ +G FT EAG   G+  L D N  VV+ L+ + +L+  
Sbjct: 329 GHGEEDFALGQRYNLPVISPINGKGYFTAEAGNLDGIFYL-DANPVVVRELEARGALVGY 387

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLR 583
               H+YP+ WR K P  +RATEQWFAS++GFR+  ++AI +V+W+     PG+G D +R
Sbjct: 388 SRMRHQYPHCWRCKHPVFYRATEQWFASIDGFRRHLLEAIDRVQWI-----PGWGRDRIR 442

Query: 584 LWVSSVDYTGDVMIGPQ 600
             V+     GD  I  Q
Sbjct: 443 GMVAG---RGDWCISRQ 456



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 104/159 (65%), Gaps = 1/159 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GAD+LRLWV S DY GD+ + P +L+QMS+ YRK+R T R+LLGNL D+    ++++Y +
Sbjct: 619 GADILRLWVCSADYRGDLAVSPGILKQMSEAYRKIRNTFRFLLGNLQDFDPDRDTVAYTE 678

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+YAL +L  +   +  +Y  Y+F +++  +  + + DLS FY +V KDRLY    
Sbjct: 679 LTELDRYALLKLHRVTDRVLRAYREYEFHQVYHTLYNYCVTDLSAFYLNVIKDRLYCEPA 738

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
            S  RR  QTVL A L S+VR++ P+L +  E+VW + P
Sbjct: 739 RSVNRRGAQTVLYAVLDSLVRLLVPVLAYTTEEVWGHFP 777


>gi|262038685|ref|ZP_06012045.1| isoleucine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261747237|gb|EEY34716.1| isoleucine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 932

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/538 (38%), Positives = 318/538 (59%), Gaps = 55/538 (10%)

Query: 96  AEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLH 155
           +E +  E+  Y  T++LPKT+F M+AN   +EP   + W    ++ + + K++G+ FVLH
Sbjct: 2   SEEKNVEKPDYAGTLNLPKTSFKMKANLAQKEPLTLRDWKKTNIYEK-SLKDEGQYFVLH 60

Query: 156 DGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA 215
           DGPPYANG++H+GHALNK+LKDII +YK L+ Y   Y+PGWD HGLPIE K+++   E A
Sbjct: 61  DGPPYANGDIHIGHALNKVLKDIILKYKRLRGYNAPYIPGWDTHGLPIEWKIMEEYGEKA 120

Query: 216 KKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMS 275
            +++TP ++R +  K+A   V+ Q A F R G+  +W++PY+TL PEYEA Q++VF ++ 
Sbjct: 121 -RNMTPLQIRQECKKYALKWVEKQKAEFIRLGILGNWDDPYITLKPEYEAEQLKVFKEIY 179

Query: 276 LQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP 335
             GY+Y+G KPV+WSP++ TALAEAE+EY +  VS SIY          ++  LL++   
Sbjct: 180 ENGYVYKGLKPVYWSPTTETALAEAEIEYKDV-VSPSIYVKME------ASKDLLDKLGT 232

Query: 336 D-LGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQK 394
           D   + +WTTTPWT+PAN  +A+N    Y +                 K+  GN      
Sbjct: 233 DEASIVIWTTTPWTLPANLGIALNKDFDYGLY----------------KTEKGN------ 270

Query: 395 KVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
              +++A +L      +      + K   G+ LE   Y HP  +R+  +VI G+++T ++
Sbjct: 271 ---LVLAKELAEKAFGEMKLSYELIKEFKGNKLERTHYKHPFLDREG-LVILGEHVTLDA 326

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           GTG VHTAPGHG +DYV    YG+ ILSPVDD+G  T+EAGK+ GL      +  +V+ +
Sbjct: 327 GTGAVHTAPGHGVDDYVVGQAYGIGILSPVDDQGHMTKEAGKYEGL-FYKKASKVIVEDI 385

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPP- 571
           +    L+    + H YP+DWR+KKP I+RATEQWF SV+    RQ A+ A+  V++VP  
Sbjct: 386 EASGHLMAYSEFTHSYPHDWRSKKPVIYRATEQWFISVDESDVRQNALKALEDVEFVPEW 445

Query: 572 ---------QEAPGYGADVLRLWVSSVDY-----TGDVMIGPQVLRQMSDIYRKLRGT 615
                    +  P +     R+W   +       T +V+  P+++ ++ +  +K +GT
Sbjct: 446 GKNRINAMLETRPDWTISRQRVWGVPIPLFYNAETNEVIYEPEIMDKVIEAVKK-KGT 502



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 89/208 (42%), Positives = 128/208 (61%), Gaps = 8/208 (3%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP      YGAD+LRLWVSSVDY  DV I   +L+QMSD YR++R T R+L+GNL+D+  
Sbjct: 615 VPKDIIEKYGADILRLWVSSVDYREDVRISENILQQMSDAYRRIRNTARFLMGNLNDFDY 674

Query: 629 GNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            N  + Y+++  ID++AL +LE + +   E Y+ Y+F+ +FQ I  F  +D+S FY D+ 
Sbjct: 675 ENKKVDYEEMYEIDKWALHKLEELKEKTTEYYDKYEFYSLFQEITYFCSIDMSAFYLDIV 734

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KDRLY     S  RRS QTVL+  L  +VRVI+P+L   AE++W+ +P     E     E
Sbjct: 735 KDRLYCEEKDSIERRSAQTVLTEVLKVLVRVISPVLSFTAEEIWERIP-----ESLKKEE 789

Query: 748 FVFESKWPVLDEKWRTFPVGEIYFWGKI 775
            V  S+W  L+ K++   + +   W KI
Sbjct: 790 SVHLSEWVELEPKYKNNELAKK--WDKI 815


>gi|255955271|ref|XP_002568388.1| Pc21g13710 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590099|emb|CAP96268.1| Pc21g13710 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 995

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 210/474 (44%), Positives = 289/474 (60%), Gaps = 32/474 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK++F  R + + R   + +  DD   + R     D + FVLHDGPPYANG+L
Sbjct: 12  WTSTLTLPKSSFPPRVSPVDRTKYLKRCTDDLYAWQRRERPAD-QPFVLHDGPPYANGDL 70

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL-DED-AKKDLTPSK 223
           H+GHALNKILKDII R +L +  +VRYVPGWDCHGLPIELK LQ L D D   + ++P+ 
Sbjct: 71  HVGHALNKILKDIICRVQLARGKRVRYVPGWDCHGLPIELKALQGLRDADITSETVSPAV 130

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
           +R  A K A+ TVK QM  F+ + V ADW N + T+D ++E  Q+ +F +M  +G IYR 
Sbjct: 131 IRTSARKLARQTVKEQMKGFRGFAVMADWENHWKTMDKQFEMRQLGIFREMVDRGLIYRK 190

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL--PDLGLAV 341
            KPV+WSPSS TALAEAELEY E H S +    F +V  P     L N  L   DL   +
Sbjct: 191 FKPVYWSPSSGTALAEAELEYKEDHTSTAALVKFPLVDIPKYL--LENPLLRGKDLSAVI 248

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PANAA+AV+  L+Y +V   S   G      ++     N+LK+   V     
Sbjct: 249 WTTTPWTLPANAAIAVSESLEYTIV--LSEKHGHLLIAQSRFEYLQNMLKEDLSV----- 301

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
             +VP++    G++L  K T         R +      Q   +   D++T +SG+G+VH 
Sbjct: 302 --IVPSI---LGSELAEKTTY--------RPLFKGPEAQPQPIFAADFVTADSGSGMVHC 348

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDE 516
           APGHG +DY   L  G+P+ +PV+DEGKFT++A      + +G  VLG+GN AV+++++ 
Sbjct: 349 APGHGMDDYEACLARGIPVFAPVNDEGKFTDKAMPLDPTRLTGKPVLGEGNTAVLEWVES 408

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              L+ +  YEHKYPYDWR+K P I RATEQWFA V   R +A+ A+  V++VP
Sbjct: 409 CDQLLAQHKYEHKYPYDWRSKLPVIVRATEQWFADVADIRSSALRALEDVRFVP 462



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 92/158 (58%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
           G D LR+W +S DYT DV+IG QVL+ ++    K R T + LLG L D+   N + Y  L
Sbjct: 676 GPDALRMWAASSDYTRDVVIGRQVLQTVNTSLHKFRVTFKLLLGALADFHPENVVPYGQL 735

Query: 638 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
            ++D+ AL  L ++V   +++ ++++F+K    + R+  ++ S FY +  KDRLYT G  
Sbjct: 736 QLVDRIALKHLSDMVLTSQKACDNFEFYKGVSTMNRWANLEFSAFYMEAIKDRLYTLGED 795

Query: 698 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           S +RR+ QT L      +   +API P L E+ W+  P
Sbjct: 796 STSRRAAQTTLFYVYNHLQEALAPITPVLVEETWEYTP 833


>gi|260583475|ref|ZP_05851223.1| isoleucine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158101|gb|EEW93169.1| isoleucine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 929

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/470 (44%), Positives = 282/470 (60%), Gaps = 39/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ + KT F MR N   +E +  + W++  ++ +   KN+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQIGKTEFPMRGNLPTKELDYQQEWEEANLYAQRQLKNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKI KD I R K +  ++  +VPGWD HGLPIE  +  +   D KK ++ ++
Sbjct: 62  DVHMGHALNKISKDFIVRSKSMSGFRAPFVPGWDTHGLPIEQALANAEGVDRKK-MSVAE 120

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   +  Q   FKR GV   W+NPY+TL PE+EA QI VFG+M+  GYIY+G
Sbjct: 121 FRKLCAEYAWRQIDNQRTVFKRLGVTGTWDNPYVTLKPEFEAEQIRVFGKMAENGYIYKG 180

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F++        GLL E   D    +WT
Sbjct: 181 LKPIYWSPSSESSLAEAEIEYKDVE-SASIYVAFKVKDG----KGLLGE---DTSFVIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + V+    YA V                K+  G           +VA D
Sbjct: 233 TTPWTLPANLGIFVHPDYVYAQV----------------KTSAGT---------FVVAKD 267

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV +L A  G + V I +   GS LE     HP   R+  +V+ GDY+T ++GTGLVHTA
Sbjct: 268 LVESLTATLGWENVEILQEFPGSALEYMTAWHPFYERES-LVMNGDYVTLDAGTGLVHTA 326

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D+  S KY L +LSPVD +G +T+EA  F G+    D N  +   L E+ +L+ 
Sbjct: 327 PGHGEDDFYYSRKYNLAVLSPVDSQGCYTDEAPGFEGM-FYADANKVITDLLTEKGALLN 385

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQVKWVPP 571
              + H YP+DWRTKKP IFRAT QWFAS++ FRQ  +D I   VKW  P
Sbjct: 386 LSYFVHSYPHDWRTKKPVIFRATPQWFASIDAFRQEILDVIENDVKWYHP 435



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 110/166 (66%), Gaps = 1/166 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +E    GAD++RLWVSSVDY  DV I   +L Q+S++YRK+R T+R++L N  D+   
Sbjct: 606 PAKEMKTKGADIIRLWVSSVDYESDVRISDDILNQVSEVYRKIRNTMRFMLANTTDFDPK 665

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            ++++++DL  +DQY L +   +V +IR++Y++YQF  ++Q +  F  VDLS FY D AK
Sbjct: 666 AHAVAFEDLRTVDQYMLVRFNQLVDSIRKAYDNYQFSTVYQGVINFCTVDLSQFYLDFAK 725

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           D +Y      F RR+ QTVL   L+ + ++++PIL H  E+VW+ L
Sbjct: 726 DVVYIDQENGFERRAMQTVLYDILVKLTKLLSPILVHTTEEVWKYL 771


>gi|404414097|ref|YP_006699684.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC7179]
 gi|404239796|emb|CBY61197.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC7179]
          Length = 921

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/468 (44%), Positives = 289/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN +   ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAERPTYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            +HMGHALNK +KDII RYK +  ++  YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  EVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMKQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P+L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L IL+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 115/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSL 769


>gi|386044326|ref|YP_005963131.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|404411320|ref|YP_006696908.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC5850]
 gi|345537560|gb|AEO07000.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|404231146|emb|CBY52550.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC5850]
          Length = 921

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/468 (44%), Positives = 289/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN +   ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAERPTYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            +HMGHALNK +KDII RYK +  ++  YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  EVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMKQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P+L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L IL+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 115/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSL 769


>gi|339448180|ref|ZP_08651736.1| isoleucyl-tRNA synthetase [Lactobacillus fructivorans KCTC 3543]
          Length = 933

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 205/471 (43%), Positives = 289/471 (61%), Gaps = 41/471 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E E  K+W+D+Q++ +    N+G+ +FVLHDGPPYANG
Sbjct: 2   RIKDTLNLGKTKFKMRGNLPVKEVEREKVWEDNQLYQQRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           ++HMGHA+NKI KD+I R+K +  Y+  YVPGWD HGLPIE    Q L +    +K ++ 
Sbjct: 62  DIHMGHAMNKITKDMIVRFKSMNGYRAPYVPGWDTHGLPIE----QQLKKKGYNRKKMST 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           ++ R     +A   V  Q   FKR GV ADW+NPYLTL PEYEAA++ VFG+M+ +G IY
Sbjct: 118 NEFRKLCHDYALKQVDRQRDEFKRLGVSADWDNPYLTLMPEYEAAEVRVFGKMADRGLIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +G KPV WS SS +ALAEAE+EY +   S S +   +++      +G+L+    D  + V
Sbjct: 178 KGLKPVIWSWSSESALAEAEVEYHDV-TSPSAFFAEKVIDG----NGVLDN---DTYMVV 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P +  + V     Y++++                        D KK   ++ 
Sbjct: 230 WTTTPWTIPGSEGITVEPDFDYSIIQHDD---------------------DPKKY--VIG 266

Query: 402 SDLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           +DL+      +G K V   +T+ G DL+N +  HP D+ +  VV+ GD++T ++GTGLVH
Sbjct: 267 TDLLDQDAEMFGWKNVRTLQTVKGKDLDNIKAQHPFDSSRQLVVMNGDFVTNDAGTGLVH 326

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAPG G++DY   ++YGL + +PVD +G  T+EAG  F G+    D N   +  L EQ  
Sbjct: 327 TAPGFGEDDYNIGMQYGLDVFAPVDSKGYLTKEAGPDFEGV-FYEDANQIALDKLKEQGQ 385

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           LI   PY+H YP+DWRTKKP I+RAT QWFASV+  R+  +DAI  V + P
Sbjct: 386 LIHYMPYKHSYPFDWRTKKPVIYRATPQWFASVDKIRKEILDAIDTVGFNP 436



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 100/158 (63%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVD + DV +     + +SD Y+K+R T+RY+L N  D+    ++I Y+D
Sbjct: 616 GADIVRLWVTSVDTSADVRVSMGNFKVVSDSYKKIRNTIRYMLANTSDFDPESDAIKYED 675

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +DQY L +L  +++N+++ Y+ Y F  I + +  FI  DLS FY D AKD LY    
Sbjct: 676 MNSVDQYMLIRLNQLIQNVKDDYDQYDFMSINKELLSFITSDLSAFYLDFAKDILYIDPK 735

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
               RRS QTVL   L+++ +++ PI+PH  E++W  L
Sbjct: 736 NGQRRRSMQTVLYTILVALTKLMTPIIPHTTEEIWSFL 773


>gi|197120433|ref|YP_002132384.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196170282|gb|ACG71255.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 946

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 213/491 (43%), Positives = 290/491 (59%), Gaps = 45/491 (9%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG----ENFVLHDGPPYAN 162
           K++V+LPKT F M+AN   REPEI + W++  +F R+  +N G    + FVLHDGPPYAN
Sbjct: 4   KYSVNLPKTDFPMKANLPQREPEILRQWEEQAIFQRLVAQNAGRPGAKRFVLHDGPPYAN 63

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G++H+GHALNKILKD++ +Y+ L      Y+PGWDCHGLPIELKV + L    ++   P+
Sbjct: 64  GDIHIGHALNKILKDVVVKYRNLNGEVADYIPGWDCHGLPIELKVDKELGPKKRELDRPA 123

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
            + A   K+A+  ++ Q  SFKR GV+  W  PY T+   YEA  +  F + + +G++YR
Sbjct: 124 IIEA-CRKYAQKWIEKQRESFKRLGVFGRWETPYATMSRGYEAEIVRTFARAAEKGFLYR 182

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG---- 338
           GKKPV+W  + RTALAEAE+EY E H S SIY  F +VSA P          P L     
Sbjct: 183 GKKPVYWCITDRTALAEAEVEY-EQHRSPSIYVAFDLVSALPD---------PKLAGRPA 232

Query: 339 -LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQS---LLEGDSAAPANKKSRPGNVLKDQK 394
            L +WTTTPWT+PAN AVA +    Y   ++     ++  D  A       PG +     
Sbjct: 233 RLVIWTTTPWTLPANLAVAAHPDFTYVAYDLNGQVVVVAKDLLAAFLADVAPGEL----- 287

Query: 395 KVFIIVASDLVPTLEAK-WGTKLVIKKTLA----------GSDLENCRYVHPVDNRQCPV 443
            V  + A    P  EA   G   V+   LA          GS LE  RY HP  +R+  V
Sbjct: 288 SVSDVPAPHSPPAHEASTGGGGTVLAPQLAHPERVLAHLDGSALEGLRYRHPFLDRESQV 347

Query: 444 VIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVL 503
           ++ GD++T E+GTGLVHTAPGHGQEDYV  L+YGL +L+PVD  G+FTE AGK++G  + 
Sbjct: 348 IL-GDHVTLEAGTGLVHTAPGHGQEDYVVGLRYGLEVLNPVDGAGRFTERAGKYAGKKIF 406

Query: 504 GDGNVAVVKYLDEQMSLIME--EPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAA 559
            + N  +V  L     L+ +     EH YP+ WR   P +FRAT+QWF S+E    R+A 
Sbjct: 407 -EANPEIVADLHASGHLLSDPKASLEHSYPHCWRCHNPVVFRATDQWFLSLEHADLRKAT 465

Query: 560 MDAIGQVKWVP 570
           +  I +V+W+P
Sbjct: 466 LAEIDRVRWIP 476



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 97/160 (60%), Gaps = 1/160 (0%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLWVS+ DY  D+ +G Q+L  +++ YRK+R T+RY LG L  +    +++   
Sbjct: 654 YGADILRLWVSASDYRDDIGLGDQILAGLAEGYRKIRNTIRYALGALDGFDPARDAVPEA 713

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  ID++AL +L    + + ++YE Y+F   +    +F  V+LS  YFDV KDRLYT  
Sbjct: 714 ELEPIDRWALARLAAWDEKVAKAYEDYEFHLAYHATMQFCAVELSALYFDVIKDRLYTWK 773

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
                RRS QT L A    ++R++APIL   A + W  LP
Sbjct: 774 ADGRQRRSAQTALHAIAQDLIRLLAPILSFTASEAWTYLP 813


>gi|297661948|ref|XP_002809485.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Pongo abelii]
          Length = 1012

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 201/471 (42%), Positives = 285/471 (60%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+T+F M+     +   E EI +     +++    ++     F LHDGPPY
Sbjct: 58  GRYRDTVLLPQTSFPMKLLGRQQPDTELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ ++   K+ +VPGWDCHGLPIE+KVL  L   A ++L+
Sbjct: 118 ANGDPHVGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSELGR-AAQNLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +
Sbjct: 177 AMEIREKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++   P + + 
Sbjct: 237 YRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLTSLIDGSSP-VSIL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN AV    + +YAVV               K S+ G++         ++
Sbjct: 296 VWTTQPWTIPANEAVCYMPESKYAVV---------------KCSKSGDLY--------VL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A+D V ++ +   T      T +G DLEN    HP+   +   ++  +++T   GTGLVH
Sbjct: 333 AADKVASVASTLETTFETISTFSGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ EE   H YPYDWRTKKP + RA++QWF ++   + AA + + +VK++P
Sbjct: 453 LLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIP 503



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/189 (44%), Positives = 112/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP +L    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689 PPYGADVLRWWVADSNVFTEVAIGPSMLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 749 INDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 808

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809 EKENDPKRRSCQTALIEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 863 WISTSSIWK 871


>gi|220915135|ref|YP_002490439.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219952989|gb|ACL63373.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 946

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 212/491 (43%), Positives = 291/491 (59%), Gaps = 45/491 (9%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG----ENFVLHDGPPYAN 162
           K++V+LPKT F M+AN   REPEI + W++  +F R+  +N G    + FVLHDGPPYAN
Sbjct: 4   KYSVNLPKTDFPMKANLPQREPEILRQWEEQAIFQRLVAQNAGRPGAKRFVLHDGPPYAN 63

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G++H+GHALNKILKD++ +Y+ L      Y+PGWDCHGLPIELKV + L    ++   P+
Sbjct: 64  GDIHIGHALNKILKDVVVKYRNLNGEVADYIPGWDCHGLPIELKVDKELGPKKRELDRPA 123

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
            + A   K+A+  ++ Q  SFKR GV+  W  PY T+   YEA  +  F + + +G++YR
Sbjct: 124 IIEA-CRKYAQKWIEKQRESFKRLGVFGRWETPYATMSRGYEAEIVRTFARAAEKGFLYR 182

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG---- 338
           GKKPV+W  + RTALAEAE+EY E H S SIY  F +VSA P          P L     
Sbjct: 183 GKKPVYWCITDRTALAEAEVEY-EQHRSPSIYVAFDLVSALPD---------PKLAGRPA 232

Query: 339 -LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQS---LLEGDSAAPANKKSRPGNVLKDQK 394
            L +WTTTPWT+PAN AVA +    Y   ++     ++  D  A       PG +     
Sbjct: 233 RLVIWTTTPWTLPANLAVAAHPDFTYVAYDLNGQVVVVAKDLLAAFLADVAPGEL----- 287

Query: 395 KVFIIVASDLVPTLEAKWGTKLVI--------KKTLA---GSDLENCRYVHPVDNRQCPV 443
            V  + A    P  EA  G    +        ++ LA   GS LE  RY HP  +R+  V
Sbjct: 288 SVSDVPAPHSPPAHEAATGGGGTVLAPQLAHPERVLAHLDGSALEGLRYRHPFLDRESQV 347

Query: 444 VIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVL 503
           ++ GD++T E+GTGLVHTAPGHGQEDYV  L+YGL +L+PVD  G+FTE AGK++G  + 
Sbjct: 348 IL-GDHVTLEAGTGLVHTAPGHGQEDYVVGLRYGLEVLNPVDGAGRFTERAGKYAGKKIF 406

Query: 504 GDGNVAVVKYLDEQMSLIME--EPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAA 559
            + N  +V  L     L+ +     EH YP+ WR   P +FRAT+QWF S+E    R+A 
Sbjct: 407 -EANPEIVADLHASGHLLSDPKASLEHSYPHCWRCHNPVVFRATDQWFLSLEHADLRKAT 465

Query: 560 MDAIGQVKWVP 570
           +  I +V+W+P
Sbjct: 466 LAEIDRVRWIP 476



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 97/160 (60%), Gaps = 1/160 (0%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLWVS+ DY  D+ +G Q+L  +++ YRK+R T+RY LG L  +    +++   
Sbjct: 654 YGADILRLWVSASDYRDDIGLGDQILAGLAEGYRKIRNTIRYALGALDGFDPARDAVPEA 713

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  ID++AL +L    + + ++YE Y+F   +    +F  V+LS  YFDV KDRLYT  
Sbjct: 714 ELEPIDRWALARLAAWDEKVAKAYEDYEFHLAYHATMQFCAVELSALYFDVIKDRLYTWK 773

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
                RRS QT L A    ++R++APIL   A + W  LP
Sbjct: 774 ADGRQRRSAQTALHAIAQDLIRLLAPILSFTASEAWTYLP 813


>gi|423682086|ref|ZP_17656925.1| isoleucyl-tRNA synthetase [Bacillus licheniformis WX-02]
 gi|383438860|gb|EID46635.1| isoleucyl-tRNA synthetase [Bacillus licheniformis WX-02]
          Length = 922

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/467 (44%), Positives = 293/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REPEI   W+D  ++  V  + +G   FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGNLPNREPEIQGKWEDMDIYSLVQKRTEGRPMFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNK+LKD I R + +  Y   YVPGWD HGLPIE  + ++  +  +K++T ++ 
Sbjct: 63  IHMGHALNKVLKDFIVRSRSMSGYHAPYVPGWDTHGLPIETALTKN-KKVKRKEMTVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q A FKR GV  DW NPY+TL PE+EA QI+VFG+M+ +GYIY+GK
Sbjct: 122 RKLCEEYAWQQIEGQKAQFKRLGVRGDWENPYVTLKPEFEAQQIKVFGEMAKKGYIYKGK 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L        + +WTT
Sbjct: 182 KPVYWSPSSESALAEAEIEYHDKR-SPSIYVAFDVKDG----KGVLTN---GEKIVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  +AV+ +L+Y+VV             A   +R             ++AS L
Sbjct: 234 TPWTIPANLGIAVHPELEYSVV-------------ATGGAR------------YVMASAL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + ++    G     + +T+ G DLE+   VHP+  R   V++ G+++TT++GTG VHTAP
Sbjct: 269 IESVAKAIGFEDHEVVQTVKGKDLEHIVAVHPLYGRDSLVML-GEHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD++G  T EA  F GL      N  + + L+E+ +L+  
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGHMTSEAPGFEGL-FYDQANKPITEQLEEKGALLKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +   H YP+DWRTKKPTIFRAT QWFAS++ FR   ++A+ + KWVP
Sbjct: 387 DFITHSYPHDWRTKKPTIFRATAQWFASIKDFRDELLEAVKKTKWVP 433



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 113/169 (66%), Gaps = 1/169 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +    +GAD+LRLWV+SVDY  DV +   +L+Q++++YRK+R T R+L GN+ D+  
Sbjct: 604 VPAKIMNQFGADILRLWVASVDYQADVRVSDAILKQVAEVYRKIRNTFRFLHGNIADFDP 663

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++I+ +DL  +DQY L +L ++++ ++++YE Y F  I+  +  F  ++LS+FY D A
Sbjct: 664 AKDAIAVEDLREVDQYILIKLNSLIEKVKKAYEEYDFAVIYHAVHNFCAIELSSFYMDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           KD +Y        RRS QTV    LL++V++IAPILPH A+++W +  F
Sbjct: 724 KDVVYIEHADHKDRRSMQTVFYETLLALVKLIAPILPHTADEMWSHFTF 772


>gi|319649644|ref|ZP_08003800.1| isoleucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317398806|gb|EFV79488.1| isoleucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 923

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/470 (44%), Positives = 289/470 (61%), Gaps = 45/470 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK ++ +PKT F MR N   REPEI   W++  ++ +V ++  G   FVLHDGPPYANG+
Sbjct: 3   YKDSLLMPKTEFPMRGNLPKREPEIQAKWEEMNIYEKVQERTKGRPMFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           +H+GHALNKILKD I R K +  Y   YVPGWD HGLPIE    Q+L      +K+++ +
Sbjct: 63  IHIGHALNKILKDFIVRSKSMTGYNAPYVPGWDTHGLPIE----QALTNKGVKRKEMSIA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R    ++A   + +Q   FKR GV  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+
Sbjct: 119 EFRKLCEEYAYEQIDSQRGQFKRLGVRGDWENPYITLKPEYEAQQIKVFGEMAKKGYIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           GKKPV+WSPSS +ALAEAE+EY +   S SIY  F++           N    D  + +W
Sbjct: 179 GKKPVYWSPSSESALAEAEIEYKDKR-SPSIYVAFKVKDGK-------NVLDQDTHIVIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  ++++  L Y+VVE            AN K               +VA 
Sbjct: 231 TTTPWTIPANLGISIHPDLTYSVVE------------ANSKK-------------FMVAE 265

Query: 403 DLVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           DL+ ++  E +W    V+ +++ G+DLEN    HP+  R   V++ G+++TT++GTG VH
Sbjct: 266 DLLASVAKEFEWEDYKVV-QSVKGTDLENVVAEHPLYGRDSLVML-GEHVTTDAGTGCVH 323

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG++D+   +KYGL +L PVDD+G  T EA  F GL      N  + + L+E  +L
Sbjct: 324 TAPGHGEDDFHVGMKYGLDVLCPVDDKGNMTSEAPGFEGL-FYDAANKPITEKLEEAGAL 382

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +      H YP+DWRTKKP IFRAT QWFAS++ FR   ++A+ +  W P
Sbjct: 383 LKLTFITHSYPHDWRTKKPVIFRATAQWFASIKDFRNELLEAVKETNWYP 432



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 136/219 (62%), Gaps = 8/219 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    +IG V  VP +     GAD+LRLWV+SVDY  DV +   +L+Q++++YR
Sbjct: 586 TLDGEGRKMSKSIGNVV-VPAKVMNQLGADILRLWVASVDYQADVRVSDAILKQVAEVYR 644

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+LLGNL D+    +S+S+++L  +DQ+ L +L  ++KN+RESY+ Y+F  I+ 
Sbjct: 645 KIRNTFRFLLGNLDDFNPATDSVSFENLREVDQFMLVKLNKLIKNVRESYDRYEFASIYH 704

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  +DLS FY D AKD LY     +  RR+ QTVL   L+++ +++APIL H +++
Sbjct: 705 AVNNFCTLDLSAFYLDFAKDVLYIEAKDNAERRAIQTVLYESLIALTKLVAPILSHTSDE 764

Query: 730 VWQNLP----FAYTLEDGSAAEFVFESKWPVLDEKWRTF 764
           VW  +P     +  L D    + +  +K   L+EKW  F
Sbjct: 765 VWSFIPNVKEVSVQLTDMPEYQELPNAK--QLEEKWTAF 801


>gi|404408457|ref|YP_006691172.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2376]
 gi|404242606|emb|CBY64006.1| isoleucyl-tRNA synthetase [Listeria monocytogenes SLCC2376]
          Length = 921

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/468 (44%), Positives = 289/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN +   ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAERPTYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            +HMGHALNK +KDII RYK +  ++  YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  EVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMKQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P+L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L +L+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 115/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFHPTTNAVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSL 769


>gi|254827094|ref|ZP_05231781.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258599477|gb|EEW12802.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 921

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/467 (44%), Positives = 288/467 (61%), Gaps = 39/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN +   ++LHDGPPYANG 
Sbjct: 3   YKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAERPTYILHDGPPYANGE 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNK +KDII RYK +  ++  YVPGWD HGLPIE  + +   +  +K+++ ++ 
Sbjct: 63  VHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+GK
Sbjct: 121 RKLCAEYAMKQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WTT
Sbjct: 181 KPVYWSPSSESALAEAEIEY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  + VN  L Y V+E            A +K               +VA  L
Sbjct: 233 TPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEAL 267

Query: 405 VPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           +P L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTAP
Sbjct: 268 LPNLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTAP 326

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KY L IL+P+DD G FTEEA  F G+      N  V + L+E  +L+  
Sbjct: 327 GHGEDDFLIGKKYDLEILAPLDDRGVFTEEAPGFEGV-FYDTANKMVTERLEEVGALLKM 385

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 386 EFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 115/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y + +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMMIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSL 769


>gi|52080145|ref|YP_078936.1| isoleucyl-tRNA synthetase [Bacillus licheniformis DSM 13 = ATCC
           14580]
 gi|319646076|ref|ZP_08000306.1| isoleucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|404489033|ref|YP_006713139.1| isoleucyl-tRNA ligase [Bacillus licheniformis DSM 13 = ATCC 14580]
 gi|81825316|sp|Q65JV7.1|SYI_BACLD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|52003356|gb|AAU23298.1| isoleucyl-tRNA synthetase [Bacillus licheniformis DSM 13 = ATCC
           14580]
 gi|52348023|gb|AAU40657.1| isoleucyl-tRNA ligase IleS [Bacillus licheniformis DSM 13 = ATCC
           14580]
 gi|317391826|gb|EFV72623.1| isoleucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 922

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/467 (44%), Positives = 293/467 (62%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REPEI   W+D  ++  V  + +G   FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGNLPNREPEIQGKWEDMDIYSLVQKRTEGRPMFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNK+LKD I R + +  Y   YVPGWD HGLPIE  + ++  +  +K++T ++ 
Sbjct: 63  IHMGHALNKVLKDFIVRSRSMSGYHAPYVPGWDTHGLPIETALTKN-KKVKRKEMTVAEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   ++ Q A FKR GV  DW NPY+TL PE+EA QI+VFG+M+ +GYIY+GK
Sbjct: 122 RKLCEEYAWQQIEGQKAQFKRLGVRGDWENPYVTLKPEFEAQQIKVFGEMAKKGYIYKGK 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +        G+L        + +WTT
Sbjct: 182 KPVYWSPSSESALAEAEIEYHDKR-SPSIYVAFDVKDG----KGVLTN---GEKIVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  +AV+ +L+Y+VV         +A  A                  ++AS L
Sbjct: 234 TPWTIPANLGIAVHPELEYSVV---------AAGGAR----------------YVMASAL 268

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + ++    G     + +T+ G DLE+   VHP+  R   V++ G+++TT++GTG VHTAP
Sbjct: 269 IESVAKAIGFEDHEVVQTVKGKDLEHIVAVHPLYGRDSLVML-GEHVTTDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG++D++   KYGL +L PVD++G  T EA  F GL      N  + + L+E+ +L+  
Sbjct: 328 GHGEDDFIIGQKYGLDVLCPVDEKGHMTSEAPGFEGL-FYDQANKPITEQLEEKGALLKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +   H YP+DWRTKKPTIFRAT QWFAS++ FR   ++A+ + KWVP
Sbjct: 387 DFITHSYPHDWRTKKPTIFRATAQWFASIKDFRDELLEAVKKTKWVP 433



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 113/169 (66%), Gaps = 1/169 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +    +GAD+LRLWV+SVDY  DV +   +L+Q++++YRK+R T R+L GN+ D+  
Sbjct: 604 VPAKIMNQFGADILRLWVASVDYQADVRVSDAILKQVAEVYRKIRNTFRFLHGNIADFDP 663

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++I+ +DL  +DQY L +L ++++ ++++YE Y F  I+  +  F  ++LS+FY D A
Sbjct: 664 AKDAIAVEDLREVDQYILIKLNSLIEKVKKAYEEYDFAVIYHAVHNFCAIELSSFYMDFA 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           KD +Y        RRS QTV    LL++V++IAPILPH A+++W +  F
Sbjct: 724 KDVVYIEHADHKDRRSMQTVFYETLLALVKLIAPILPHTADEMWSHFTF 772


>gi|386054273|ref|YP_005971831.1| isoleucyl-tRNA synthetase [Listeria monocytogenes Finland 1998]
 gi|346646924|gb|AEO39549.1| isoleucyl-tRNA synthetase [Listeria monocytogenes Finland 1998]
          Length = 921

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/468 (44%), Positives = 289/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN +   ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAERPTYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            +HMGHALNK +KDII RYK +  ++  YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  EVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMKQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P+L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L +L+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 115/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y + +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMMIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSL 769


>gi|417885545|ref|ZP_12529699.1| isoleucine--tRNA ligase [Lactobacillus oris F0423]
 gi|341595467|gb|EGS38116.1| isoleucine--tRNA ligase [Lactobacillus oris F0423]
          Length = 931

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/469 (43%), Positives = 291/469 (62%), Gaps = 38/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L +T F MR    V E +  +LW+++QV+      N+G+ +FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGRTKFPMRGKLPVTEAQREQLWEENQVYQLRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHA+NKI KD I RYK +  Y+  YVPGWD HGLPIE ++ +S  +  +K ++ S+
Sbjct: 62  NIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQLTKSGYD--RKKMSTSE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    K+A   V  Q   FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ 
Sbjct: 120 FRDLCRKYALEQVDKQRTDFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQA 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY +     + +A             +L++   +  L VWT
Sbjct: 180 KKPVYWSWSSESALAEAEVEYHDVVAKTAFFA-----EQVKDGKDILDD---NTYLVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWTVPA+ AVAVN K  Y+VV+           PAN   +             +VA+D
Sbjct: 232 TTPWTVPASEAVAVNGKFDYSVVK-----------PANDDRQ------------FVVATD 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  +  K G   L + K L+G+DL+     HP  +R   +V   DY+T ++GTGLVHTA
Sbjct: 269 LLDGVADKLGWEDLEVVKHLSGNDLDGMVTKHPYIDRDI-LVGTADYVTADAGTGLVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G +DY   L++ LPI +P+ D+G  T+E G  F G+    D +   +K L+E  SL+
Sbjct: 328 PGYGDDDYHFGLEHNLPIFAPITDQGVLTKENGADFDGV-FYQDADDISLKKLEEAGSLL 386

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +EEP +H YP+DWRTKKP IFRAT+QWF S++  RQ  +DA+ +V + P
Sbjct: 387 LEEPLKHSYPFDWRTKKPIIFRATDQWFVSIDKMRQDILDALEEVNYQP 435



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/156 (41%), Positives = 101/156 (64%), Gaps = 1/156 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D++   +++SY+ 
Sbjct: 615 GAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTGDFKPTDDTVSYEK 674

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY L +L + +K +R  +++Y F   ++++  F+  DLS FY ++AKD LY    
Sbjct: 675 LNSVDQYMLVKLNHFLKEMRADFDNYDFLDAYKLLINFVNNDLSAFYMNLAKDVLYIEPA 734

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQ 732
            S  RRS QTV    LL++V+++ PILPH  E+VW+
Sbjct: 735 DSHARRSMQTVFYNILLTMVKLLTPILPHTTEEVWE 770


>gi|255025946|ref|ZP_05297932.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 921

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/468 (44%), Positives = 289/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN +   ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAERPTYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            +HMGHALNK +KDII RYK +  ++  YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  EVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMKQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P+L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T E+GTG VHTA
Sbjct: 267 LLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATAEAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L +L+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEVLAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 115/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY++
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNTVSYEN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y + +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMMIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSL 769


>gi|410667639|ref|YP_006920010.1| isoleucyl-tRNA synthetase IleS [Thermacetogenium phaeum DSM 12270]
 gi|409105386|gb|AFV11511.1| isoleucyl-tRNA synthetase IleS [Thermacetogenium phaeum DSM 12270]
          Length = 935

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/497 (41%), Positives = 294/497 (59%), Gaps = 44/497 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MRAN   REPEI + W+   ++ R+ +++ G+  ++LHDGPPYANGN
Sbjct: 4   YKATLNLPQTDFPMRANLPQREPEILRYWEKIGLYKRIQEQSKGKPKYILHDGPPYANGN 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH LNK LKDI+ +YK +  Y   YVPGWD HGLPIE + +++L  D  + + P++ 
Sbjct: 64  IHLGHTLNKTLKDIVVKYKTMAGYDAPYVPGWDTHGLPIEQQAIKTLGVDRHR-VAPAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   V  Q   FKR GV  DW++PYLTL P YEA QI +FG+M+ +GYIY+G 
Sbjct: 123 RRICREYALKYVDIQREEFKRLGVQGDWDHPYLTLHPTYEAVQIGIFGEMAKRGYIYKGM 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W     TALAEAE+EY E   S SIY +F     P      L        + +WTT
Sbjct: 183 KPVYWCTDCETALAEAEVEYQEDE-SDSIYVLF-----PIRDGKELINVDEKTYVLIWTT 236

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P N A++++   +Y + E+                       D ++V  IVA +L
Sbjct: 237 TPWTIPGNQAISLHPDYRYVLAEV-----------------------DGRRV--IVAEEL 271

Query: 405 VPTL-EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           +  + E K  T   I     G +LE  R  HP  +R   ++I G+++T E GTG VHTAP
Sbjct: 272 LRQVAEIKGETHPPILGAWQGRELEGIRCAHPFYDRDS-LLILGEHVTLEQGTGAVHTAP 330

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
            HG ED+    KYG+P+LS VD  G++  EAG F+G +V+ + N  V+  L+ +  L  +
Sbjct: 331 AHGTEDFEVCQKYGIPVLSLVDGSGRYLPEAGIFAG-EVIWESNQKVIAELERRGLLYHK 389

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLR 583
               H+YP+ WR K+P +FRATEQWFAS++GFR+ A+ AI  V+W+     P +G + +R
Sbjct: 390 SKIVHQYPHCWRCKEPLMFRATEQWFASIDGFRKEALKAIEGVRWI-----PAWGEERIR 444

Query: 584 LWVSSVDYTGDVMIGPQ 600
              S V   GD  I  Q
Sbjct: 445 ---SMVAERGDWCISRQ 458



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 125/203 (61%), Gaps = 8/203 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGADVLRLWV+S DY  D+ +   +++Q+++ YRK+R T R+LLGNL+D+    +S+ Y+
Sbjct: 616 YGADVLRLWVTSADYRNDMAVSLNIMKQLAEAYRKIRNTFRFLLGNLYDFDPEKDSLPYE 675

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
            L ++D++ LF+L  +++ +  +YE  +F  ++  I  F +VD+S+FY D+ KD LY G 
Sbjct: 676 QLSLLDKWILFRLHQLIQRVTRAYEDSEFHIVYHAISTFCVVDMSSFYLDITKDILYCGA 735

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             S  RR  QTVL      +VR++AP+L   AE++W  LP A        A  V  ++WP
Sbjct: 736 AESRERRGIQTVLYEAANVLVRLLAPVLCFTAEEIWSFLPGAR-----ERAVSVHLAEWP 790

Query: 756 VLDEKWRTFPVGEIYFWGKILEV 778
            ++ ++    + +   WGKIL +
Sbjct: 791 QVNRRYLDPELEKT--WGKILSL 811


>gi|291542661|emb|CBL15771.1| Isoleucyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 921

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 199/471 (42%), Positives = 279/471 (59%), Gaps = 38/471 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           Y  T++LPKT F MRA     EP   + W+D +V+  +   N+G+  F+LHDGPPYANG+
Sbjct: 5   YNSTLNLPKTDFPMRAGLPKSEPVTLQNWEDEKVYENLMKVNEGKPLFILHDGPPYANGD 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKD I RYK +  +K  YVPGWD HGLP ELK  +        +++  +L
Sbjct: 65  IHLGHALNKILKDFIVRYKNMAGFKAPYVPGWDTHGLPTELKARKKAGIGNSAEISVVEL 124

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    +F K  +  Q   FKR GV  +W+ PY+TL+ E+EA QI VF +M+ +GYIY+G 
Sbjct: 125 RKMCEEFVKGYINDQRTQFKRLGVIGEWDKPYITLNHEFEAEQIRVFAEMATKGYIYKGL 184

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD---LGLAV 341
           KPV+W P  +TALAEAE+EY E     SIY  F +        G+ +    D   +   +
Sbjct: 185 KPVYWCPECKTALAEAEIEYAEDPC-HSIYVKFNVT----DDKGVFSNMGIDPSKVKFVI 239

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTT WT+PAN A+ V  + +Y+V++      GD                     ++++A
Sbjct: 240 WTTTTWTLPANVAICVGPRFEYSVIKT-----GDE--------------------YLVMA 274

Query: 402 SDLVPT-LEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           S+L  + L+    T   +  T+ GS+LE  +  HP  +R+  +VI G+++T ESGTG VH
Sbjct: 275 SELYKSALDEAGITDFEVVATVKGSELEYIKTAHPFLDRE-SLVIVGEHVTLESGTGCVH 333

Query: 461 TAPGHGQEDYVTSLKY-GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           TAPGHG +DY     Y  +PI+ PVD  G  TEEAG+F+GL    + N  +  YL+E  S
Sbjct: 334 TAPGHGVDDYNVCQNYPEIPIICPVDSNGVLTEEAGQFAGL-TTDEANKKIAAYLEENGS 392

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L   +   H+YP+ WR K P +FRAT+QWF SV+ F+  A+DAI  VKW+P
Sbjct: 393 LFALKKIVHQYPHCWRCKTPILFRATDQWFCSVDDFKDEAVDAINTVKWIP 443



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 117/171 (68%), Gaps = 2/171 (1%)

Query: 569 VPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 627
           + PQ+    YGADVLRLWV+S DY  DV I   +L+Q+S+ YRK+R T RY+LGN+ D+ 
Sbjct: 614 ISPQDVIKQYGADVLRLWVASTDYQTDVHISKDILKQISESYRKIRNTARYILGNISDFN 673

Query: 628 VG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
              + + +D +  ID++AL +L +++  +R SY++Y+F  ++  I  F +VD+SNFY DV
Sbjct: 674 PDTDMVDFDKVLPIDKWALAKLNDLITKVRTSYDNYEFHIVYHSIHNFCVVDMSNFYLDV 733

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
            KDRLYT    S +RR+ QTV+   L ++ R+IAP+L + ++++W+ +P +
Sbjct: 734 LKDRLYTEKADSLSRRAAQTVIYVILDAMTRMIAPLLAYTSDEIWKYMPHS 784


>gi|350589265|ref|XP_003482824.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Sus
           scrofa]
          Length = 1055

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 200/476 (42%), Positives = 286/476 (60%), Gaps = 29/476 (6%)

Query: 99  EKKEEGRYKHTVDLPKTTFGMR---ANALVREPEIHKLWDDHQVFLRVADKNDGENFVLH 155
           +    G Y+ TV LP+T+F M+   +     E EI +     +++    ++     F LH
Sbjct: 53  QNSRNGSYRDTVLLPQTSFPMKLLGSQQPDTELEIQQKCGFSELYSWQRERKAKTEFCLH 112

Query: 156 DGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA 215
           DGPPYANG+ H+GHALNKILKDI NRY +++  K+ +VPGWDCHGLPIE+KVL  L   A
Sbjct: 113 DGPPYANGDPHVGHALNKILKDIANRYHMMRGSKIHFVPGWDCHGLPIEIKVLSELGGKA 172

Query: 216 KKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMS 275
           + +L+  ++R KA  FAKA ++ Q ++F R+G+ ADW+N Y T D +YEA Q+ +F QM 
Sbjct: 173 Q-NLSAMEIREKARSFAKAAIEKQKSAFIRWGIMADWDNCYYTFDGKYEARQLRIFYQMY 231

Query: 276 LQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP 335
            +G IYR  KPV+WSPSSRTALAEAELEY   HVSRS+Y  F ++   P  + L++   P
Sbjct: 232 DKGLIYRSYKPVYWSPSSRTALAEAELEYNPEHVSRSVYVKFPLLKPSPKLASLIDGSSP 291

Query: 336 DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
            +   VWTT PWT+PAN AV    + +YAVV               K S+ G+       
Sbjct: 292 -VSFLVWTTQPWTIPANQAVCYMPESKYAVV---------------KCSKSGD------- 328

Query: 396 VFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESG 455
            F I+A+D V ++ +  GT   +  T +G DLE+    HP+   +   ++  +++T   G
Sbjct: 329 -FYILAADKVTSVASTLGTTFEVISTFSGVDLESGTCTHPLIAERASPLLPANHVTMTKG 387

Query: 456 TGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYL 514
           TGLVHTAP HG EDY  + ++ L     V+++G FT+ AG +     VL +G   V+K L
Sbjct: 388 TGLVHTAPAHGMEDYSVASQHSLSTDCLVNEDGVFTDAAGPELQNKAVLEEGTEVVIKML 447

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               +L+ EE   H YPYDWRTKKP + RA++QWF ++   +  A D + +VK++P
Sbjct: 448 QAANNLLKEEELVHSYPYDWRTKKPVVIRASKQWFVNITDVKTTAKDLLKKVKFIP 503


>gi|332164770|ref|NP_001193724.1| isoleucyl-tRNA synthetase, mitochondrial [Bos taurus]
          Length = 1012

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 202/477 (42%), Positives = 282/477 (59%), Gaps = 31/477 (6%)

Query: 99  EKKEEGRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLH 155
           +    G Y+ TV LP+T+F M+     +   E EI +     +++    ++     F LH
Sbjct: 53  QNSSNGSYRDTVLLPQTSFPMKLLGRQQPDTELEIQQKCGFSELYSWQRERKVKAEFCLH 112

Query: 156 DGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA 215
           DGPPYANG+ H+GHALNKILKDI NRY +++  K+ +VPGWDCHGLPIE+KVL  L   A
Sbjct: 113 DGPPYANGDPHVGHALNKILKDIANRYHMMRGSKIHFVPGWDCHGLPIEIKVLSELGGKA 172

Query: 216 KKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMS 275
           + +L+  ++R KA  FAKA ++ Q  SF R+G+ ADWNN Y T D  YEA Q+ +F QM 
Sbjct: 173 Q-NLSAMEIREKARSFAKAAIEKQKLSFIRWGIMADWNNCYYTFDGRYEAKQLRIFYQMY 231

Query: 276 LQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP 335
            +G IYR  KPV WSPSSRTALAEAELEY   H+SRS+Y  F ++   P  + LL+   P
Sbjct: 232 DKGLIYRSYKPVFWSPSSRTALAEAELEYNPEHISRSVYVKFPLLKPSPKLASLLDGSSP 291

Query: 336 DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
            +   VWTT PWT+PAN AV    + +YAVV+  S   GD                    
Sbjct: 292 -VSFLVWTTQPWTIPANQAVCYMPESKYAVVKCSS--SGD-------------------- 328

Query: 396 VFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHP-VDNRQCPVVIGGDYITTES 454
              I+ +D V ++ +  GT   +  T +G DLEN    HP +  R+ P ++  +++T   
Sbjct: 329 -LYILGADKVTSVASTLGTTFEVISTFSGVDLENGSCAHPLISERESP-LLPANHVTMTK 386

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKY 513
           GTGLVHTAP HG EDY  + ++ L     V+++G FT+ AG +     VL +G  AV+  
Sbjct: 387 GTGLVHTAPAHGMEDYSVAAQHNLSTDCLVNEDGVFTDAAGPELQNKAVLKEGTDAVIMM 446

Query: 514 LDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L    +L+ EE   H YPYDWRTKKP + RA++QWF ++   +  A + + +VK++P
Sbjct: 447 LQAAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNITDIKTTAKELLKKVKFIP 503



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 81/189 (42%), Positives = 111/189 (58%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V I P +L    D   KLR TLR+LLGN+  +    +SI 
Sbjct: 689 PPYGADVLRWWVAESNVFTEVTISPSLLNAARDDISKLRNTLRFLLGNVAGFNPETDSIP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            + + +IDQY L  L+++   I +SY+ Y F K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 749 VNSMYVIDQYMLHLLQDLANKINDSYKQYDFGKVVRLLQAFYTRELSNFYFSIIKDRLYC 808

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L+  L  +VR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 809 ENADDPKRRSCQTALAEILDVMVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 862

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 863 WIKTSSIWK 871


>gi|15615108|ref|NP_243411.1| isoleucyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|81786425|sp|Q9K9V0.1|SYI_BACHD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|10175165|dbj|BAB06264.1| isoleucyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 921

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 215/468 (45%), Positives = 290/468 (61%), Gaps = 41/468 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           +K T+ +PKT F MR N   REP++ + W D  ++ +V  +  G   FVLHDGPPYANG+
Sbjct: 3   FKETLLMPKTDFPMRGNLPNREPQMQEEWKDMNIYEKVQARTKGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNK+LKD+I RYK +  +   YVPGWD HGLPIE  + +S  +  +K ++ ++ 
Sbjct: 63  IHMGHALNKVLKDMIVRYKSMAGFHAPYVPGWDTHGLPIEQALTKSGVD--RKSMSVAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    +FA+  +  Q   F R GV  DW NPY+TLD  +EA Q++VFG+M+ +GYIY+GK
Sbjct: 121 RKLCEEFARKQIDRQREQFMRLGVRGDWWNPYVTLDKGFEAQQVKVFGEMAKKGYIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F      P   G  N    D  + +WTT
Sbjct: 181 KPVYWSPSSESALAEAEIEYHDKR-SPSIYVAF------PVKDG-KNVLQQDEKIVIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  +AV+ +L+Y+VV +                      K +K V   VAS L
Sbjct: 233 TPWTIPANLGIAVHPELEYSVVAV----------------------KGEKYV---VASGL 267

Query: 405 VPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           V TLE+  +W    ++ +T+ G DLE     HP+  R   VV+ GD++T ++GTG VHTA
Sbjct: 268 VETLESALEWENPEIL-RTIKGVDLEYVVAEHPIYGRDSLVVL-GDHVTLDAGTGCVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG+EDY+   KYGL +L PVDD+G  T EA  F GL    + N  + + LDE  +L+ 
Sbjct: 326 PGHGEEDYIVGQKYGLDVLCPVDDKGYMTAEAPGFEGL-FYDEANKPITQKLDECGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                H Y +DWRTKKP I+RAT QWFAS+E FR   + AI +VKWVP
Sbjct: 385 LTFITHSYAHDWRTKKPVIYRATAQWFASIENFRDELLRAIQEVKWVP 432



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 124/186 (66%), Gaps = 2/186 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    ++G V  +P       GAD+LRLWV+SVDY  DV +  ++L+Q+S++YR
Sbjct: 586 TLDGEGKKMSKSLGNVV-IPNDVMKQLGADILRLWVASVDYQADVRVSDKILKQVSEVYR 644

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+LLGNLHD+    + ++ D L  +D+Y L +L +++  ++++Y+ YQF  ++ 
Sbjct: 645 KIRNTYRFLLGNLHDFHPATHRVAIDQLNGLDRYMLAKLNDVINRVKKAYDEYQFSTVYH 704

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  ++LS+FY D+AKD LY        RR+ QTV+   L+++ ++++PI+PH A++
Sbjct: 705 ELHNFCTIELSSFYMDIAKDTLYVKHADHPDRRATQTVMYDVLVALAKLLSPIIPHTADE 764

Query: 730 VWQNLP 735
           VW+++P
Sbjct: 765 VWKHIP 770


>gi|259046445|ref|ZP_05736846.1| isoleucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036861|gb|EEW38116.1| isoleucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 929

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 209/470 (44%), Positives = 282/470 (60%), Gaps = 39/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+ + KT F MR N   +E E  K W++  V+ +   KN+G+ +FVLHDGPPYANG
Sbjct: 2   KMKETLQIGKTEFPMRGNLPTKEVEYQKEWEEADVYGQRQAKNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            LHMGHALNKI KD I R K +  ++  YVPGWD HGLPIE  +  +   D KK L+ ++
Sbjct: 62  ALHMGHALNKISKDFIVRSKSMSGFRAPYVPGWDTHGLPIEQALANAEGVDRKK-LSIAE 120

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q A FKR GV   W+NPYLTL PE+EA QI VFG+M+  GYIY+G
Sbjct: 121 FRKLCAEYALRQVDNQRAEFKRLGVTGTWDNPYLTLQPEFEAEQIRVFGKMAENGYIYKG 180

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S SIY  F++        G++++   D    +WT
Sbjct: 181 LKPIYWSPSSESSLAEAEIEYKDVE-SPSIYVAFKVKDG----KGVVSD---DASFVIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + V+    YA V                        K +K  F +VA +
Sbjct: 233 TTPWTLPANLGIFVHPDYVYAEV------------------------KTEKGTF-VVAKE 267

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV +L    G + V + K   G++LE     HP   R+  V++ GDY+T ++GTGLVH+A
Sbjct: 268 LVNSLAETLGWESVEVVKEFRGNELEYATAWHPFYERESLVML-GDYVTLDAGTGLVHSA 326

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D+  S KY L +LSPVD++G +T EA  F G+      N  +   L +  SL+ 
Sbjct: 327 PGHGEDDFYYSRKYNLDVLSPVDNQGHYTAEAPGFEGM-FYAKANKVITDMLADNGSLLK 385

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQVKWVPP 571
              + H YP+DWRTKKP IFRAT QWFAS++ FRQ  +D I   VKW  P
Sbjct: 386 LSYFVHSYPHDWRTKKPVIFRATPQWFASIDTFRQDILDVIENDVKWYHP 435



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 111/166 (66%), Gaps = 1/166 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +E    GAD++RLWVSSVDY  DV I  ++L Q+S+ YRK+R T+R++L N  D+   
Sbjct: 606 PAKEMQTKGADIIRLWVSSVDYESDVRISTEILNQISEAYRKIRNTMRFMLANTTDFEPS 665

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            +++++ DL  +DQY + +  ++VK I E+YE+Y+F  I+Q +  F  VDLS FY D AK
Sbjct: 666 KHAVAFKDLRSVDQYMMIRFNDVVKTIEEAYENYEFSTIYQTVMNFCTVDLSQFYLDFAK 725

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           D +Y     ++ RR+ QTV+   L+ + ++++PIL H +E+VW+ L
Sbjct: 726 DVVYIEHEDNYQRRAMQTVIYDILVKLTKLLSPILVHTSEEVWKYL 771


>gi|284802465|ref|YP_003414330.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995607|ref|YP_003417375.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284058027|gb|ADB68968.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284061074|gb|ADB72013.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 921

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/468 (44%), Positives = 289/468 (61%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANG 163
            YK T+ +PKT F MR N   +EPE    W++ +++ ++ +KN +   ++LHDGPPYANG
Sbjct: 2   EYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAERPTYILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            +HMGHALNK +KDII RYK +  ++  YVPGWD HGLPIE  + +   +  +K+++ ++
Sbjct: 62  EVHMGHALNKTIKDIIVRYKSMAGFRSPYVPGWDTHGLPIETAIAKKGVK--RKEMSIAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R   A++A   V  Q   FKR G+  DW NPY+TL PEYEA QI+VFG+M+ +GYIY+G
Sbjct: 120 FRKLCAEYAMKQVDGQRTGFKRLGINGDWENPYITLLPEYEAEQIKVFGEMAKKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SI+  F++        G+L+E      + +WT
Sbjct: 180 KKPVYWSPSSESALAEAEIEY-QDKTSASIFVAFKVTDG----KGVLDE---GTNIVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN  L Y V+E            A +K               +VA  
Sbjct: 232 TTPWTIPANMGITVNPDLDYVVIE-----------SAGEK--------------YVVAEA 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+P+L  K G +   + KT+ GS+L+     HP  +R   +V+ G++ T ++GTG VHTA
Sbjct: 267 LLPSLREKLGFEDATVVKTVRGSELDRVVTKHPFYDRDS-LVMNGEHATADAGTGAVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++D++   KY L IL+P+DD G FTEEA  F G+      N  V + L+E  +L+ 
Sbjct: 326 PGHGEDDFLIGKKYDLEILAPLDDRGVFTEEAPGFEGV-FYDTANKMVTEKLEEVGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++ FR   + A+  V W P
Sbjct: 385 MEFITHSYPHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTP 432



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 114/158 (72%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S++YRK+R T+R+LLGN++D+    N++SY +
Sbjct: 612 GADIVRLWVASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFHPTTNAVSYKN 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y + +L ++VKN+++SYE+++F  I+  I  F  V+LS FY D AKD +Y    
Sbjct: 672 LREVDKYMMIKLNDLVKNVKDSYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV    ++++ +++APILPH  E+VW +L
Sbjct: 732 DSHDRRAMQTVFYEAVVTLTKLLAPILPHTTEEVWNSL 769


>gi|326915110|ref|XP_003203864.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Meleagris
           gallopavo]
          Length = 930

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 189/422 (44%), Positives = 260/422 (61%), Gaps = 27/422 (6%)

Query: 150 ENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQ 209
           + F LHDGPPYANG+ H+GHALNKILKDI NR+ +++ YKV YVPGWDCHGLPIELK L 
Sbjct: 23  QEFCLHDGPPYANGDPHVGHALNKILKDITNRFHMMRGYKVHYVPGWDCHGLPIELKALS 82

Query: 210 SLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIE 269
            +     ++L+P ++R KA +FA+  ++ Q A+F R+G+ ADW N Y T DP+YEA Q+ 
Sbjct: 83  EIK--GAENLSPVEIRQKAKEFAERAIEKQKAAFIRWGIMADWANCYCTFDPKYEANQLR 140

Query: 270 VFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL 329
           VF +M  +G+IY+  KPV WSPS++TALAEAELEY E HVSRS+Y  F ++ +PP  + +
Sbjct: 141 VFHKMYDKGFIYQDYKPVFWSPSAKTALAEAELEYNEQHVSRSVYMKFPLLKSPPKLASV 200

Query: 330 LNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNV 389
           ++   P   + VWTT PWTVPAN AV      +Y+VV+  +  E                
Sbjct: 201 IDGSSP-TSVLVWTTQPWTVPANQAVCYMPDAEYSVVKCATTGE---------------- 243

Query: 390 LKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDY 449
                   +I+A++ V +  A   T+  +  T  G DL +    HP    +   ++  ++
Sbjct: 244 -------HLILAANRVESTAAVLDTQFEVISTCKGEDLADGSCAHPTIPGRVSPLLPANH 296

Query: 450 ITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNV 508
           +T   GTGLVHTAP HG EDY  +  + LP    VD+ G FTE AG +    +VL +GN 
Sbjct: 297 VTMAKGTGLVHTAPAHGMEDYSVASHHQLPTECLVDERGHFTEAAGPELKNKNVLEEGNE 356

Query: 509 AVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
           AV+K L    SL+ EE Y H YPYDWRTKKP I RA++QWF +    +  A + + +VK 
Sbjct: 357 AVIKMLQAAGSLLKEEKYVHSYPYDWRTKKPMIIRASKQWFVNTANVKATAQEVLKKVKI 416

Query: 569 VP 570
           +P
Sbjct: 417 IP 418



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 113/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P YGADVLR WV+  +   +V+IGP VL    D   KLR TLR++LGN+  +    +SI 
Sbjct: 604 PPYGADVLRWWVAESNVFTEVLIGPVVLNAARDDINKLRNTLRFMLGNMAGFNPETDSIP 663

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
             ++ ++DQY L  L++    + E+Y+ Y + K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 664 PSEMYIVDQYMLHLLQDYGSKVTEAYKQYDYSKVVRLLQAFCSRNLSNFYFSIIKDRLYC 723

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQTVL+  L  +VR  APILPHLAE+V+Q+LP+         +E VF + 
Sbjct: 724 EEEKDPKRRSCQTVLAEALDVVVRSFAPILPHLAEEVFQHLPYK------KDSEGVFRTG 777

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 778 WINASSGWK 786


>gi|115402377|ref|XP_001217265.1| hypothetical protein ATEG_08679 [Aspergillus terreus NIH2624]
 gi|114189111|gb|EAU30811.1| hypothetical protein ATEG_08679 [Aspergillus terreus NIH2624]
          Length = 1519

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 220/538 (40%), Positives = 303/538 (56%), Gaps = 43/538 (7%)

Query: 49  LFDSRGSSSLKFLSFLNVTCYSICSGDEFC--SSSKRRSRGPVMAAKKAAEGEKKEEGRY 106
           LF+   + ++  L    +  Y I     +C  S+S    RG +  +    E  +     +
Sbjct: 473 LFEVLKNGAINLLKPFALVQYEIYVFAYYCNNSTSLAGDRGGICFSGSMPELPRTLTRSW 532

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLH 166
             T+ LPK+TF  R     +   + +  DD   + R     D   FVLHDGPPYANG+LH
Sbjct: 533 SSTLKLPKSTFPARVTPADQTKYLRRCTDDLYAWQRRERPAD-RPFVLHDGPPYANGDLH 591

Query: 167 MGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQS---LDEDAKKDLTPSK 223
           +GHALNKILKDII R +L    +VRYVPGWDCHGLPIELK L +   L ++A   +T + 
Sbjct: 592 VGHALNKILKDIICRVQLGLGKRVRYVPGWDCHGLPIELKALDAQRDLGKEADGPVTAAV 651

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
           +R  A K A  TVK QM  F+ + V ADW + + T+D ++E  Q+ VF +M  +G IYR 
Sbjct: 652 IRKAARKLAARTVKDQMKGFRGFAVMADWESHWKTMDKDFEKRQLGVFREMVEKGLIYRR 711

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL--PDLGLAV 341
            KPV+WSPS+ TALAEAELEY + HVS +    F +VS P  T    N  L    L   +
Sbjct: 712 FKPVYWSPSTGTALAEAELEYKDDHVSTAALVKFPLVSIP--THLAQNPLLQGKKLSAVI 769

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PANA +AV+A LQY VV+                         ++   +++A
Sbjct: 770 WTTTPWTLPANAVIAVHADLQYTVVQ------------------------SEEHGHLLIA 805

Query: 402 SDLVPTLEAKWGTKL-VIKKTLAGSDLENCRYVHPV---DNRQCPVVIGGDYITTESGTG 457
              +  LE+     L VI  ++ GS+L +     P+      +   +I  D++T +SG+G
Sbjct: 806 QSRLEYLESMLKEDLSVIVPSILGSELADQTTYRPIFKGSKAEDQPIIAADFVTADSGSG 865

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVK 512
           LVH APGHG +DY   +  G+P L+PVDD G+FT+ A      + SG  VLG+GN A ++
Sbjct: 866 LVHCAPGHGMDDYDACVSRGIPALAPVDDHGRFTDLAMPDDPARLSGKSVLGEGNDAALE 925

Query: 513 YLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Y++ Q  L+ +  YEHKYPYDWR+K P I RATEQWFA V   R AA+ A+  V +VP
Sbjct: 926 YVESQGYLLAKHQYEHKYPYDWRSKLPIIIRATEQWFADVADIRGAAVKALEDVNFVP 983



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 95/160 (59%)

Query: 578  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
            G D LR+WV+S DYT DV+IG QVL+ ++    K R T + LLG L D+RV + + Y+ L
Sbjct: 1194 GPDALRMWVASSDYTRDVVIGKQVLQTVNTSLHKYRVTFKLLLGALSDFRVESQVPYEQL 1253

Query: 638  PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
               D+ AL  L  +V+  +++  +++F+K    I R+  ++ S FY +  KDRLYT    
Sbjct: 1254 QQSDRIALMHLAEMVRTCQKACANFEFYKAVNAINRWANLEFSAFYMETIKDRLYTYSEN 1313

Query: 698  SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
            S +RR+ QT L      +  V+API P L E+ W++ P A
Sbjct: 1314 STSRRAAQTTLFHIYHYLQEVLAPITPMLVEETWEHTPEA 1353


>gi|332638200|ref|ZP_08417063.1| isoleucyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 929

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 206/469 (43%), Positives = 289/469 (61%), Gaps = 38/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MR N    E +   +W +++V+ +    N+G+ +F+LHDGPPYANG
Sbjct: 2   KMKQTLNLGKTKFPMRGNLPQTELQRENIWFENKVYEQRQKMNEGKPSFMLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHA+NKI KDII RYK +  +   +VPGWD HGLPIE ++ ++  +  +K + P  
Sbjct: 62  NIHIGHAMNKISKDIIVRYKSMNGFYAPFVPGWDTHGLPIEQQLTKAGKD--RKAVGPVI 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R  A +FA+  VK QMA FKR G+ ADW+NPYLTL PE+EAAQ+ VFG+M+ +  IYRG
Sbjct: 120 WRKMAEEFARKQVKTQMADFKRLGISADWDNPYLTLLPEFEAAQLRVFGEMAKKNLIYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +ALA AE+EY   H   S  A F          GLL+    D     WT
Sbjct: 180 KKPVFWSWSSESALAMAEIEY---HDIESDTAFFS--ERVKDGKGLLDN---DTYFIAWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWTVPA+ A+A+NA  +Y+ ++ +          ++KK               IVAS 
Sbjct: 232 TTPWTVPASQALALNADFEYSQIQPKG---------SDKK--------------YIVASA 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  +  K+G  +  +  T  G +LE     HP  +R+  +V+  DY+T ++GTG VHTA
Sbjct: 269 LLGAVAPKFGWDEYEVVATFTGKELEMATTEHPFMDREI-LVVNADYVTADAGTGAVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D+ T  +Y +P++  VDD+GK T EAG  F G+    D +   ++ L+E  +LI
Sbjct: 328 PGFGEDDFATGQRYNMPVIMNVDDQGKMTAEAGPDFEGV-FYQDADKVSLQKLEEADALI 386

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           + EP  H YP+DWRTKKP IFRA  QWFAS++ FRQ  +DA+  VK+ P
Sbjct: 387 LHEPVVHSYPFDWRTKKPVIFRAVPQWFASIDSFRQDILDALDDVKFQP 435



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 113/193 (58%), Gaps = 9/193 (4%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+SVD + DV +   +L Q S+ YRK+R T+R+LL N  D+    ++I++DD
Sbjct: 615 GAEIIRLWVTSVDSSADVRVSMDLLSQTSETYRKIRNTMRFLLANTADFDPKADTIAFDD 674

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L   DQY   +   +V +I+ +Y+ Y F  + +++  FI VDLS FY D AKD LY    
Sbjct: 675 LVAADQYFYARFNKLVADIKAAYDVYDFQAVNKLVINFINVDLSAFYLDFAKDILYVEAP 734

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLEDGSAAEFVFE 751
               RRS QTVL   L+ + +++ PILPH AE++++ L      FAY  E  + A+    
Sbjct: 735 KGHARRSLQTVLYKVLVDLDKLLLPILPHTAEEIFEYLEHEEGDFAYLTEMPAVADIANA 794

Query: 752 SKWPVLDEKWRTF 764
            +   L  KW  F
Sbjct: 795 DE---LMAKWSEF 804


>gi|227891035|ref|ZP_04008840.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867124|gb|EEJ74545.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 948

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 207/478 (43%), Positives = 292/478 (61%), Gaps = 37/478 (7%)

Query: 96  AEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVL 154
            E E+ +  + K T++L KT F MR N  VRE E    W++++V+ +    N+G+ +FVL
Sbjct: 10  TERERMDLMKVKDTLNLGKTKFPMRGNLPVREVERQNEWEENKVYEQRQKLNEGKPSFVL 69

Query: 155 HDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDED 214
           HDGPPYANGN+HMGHA+NKI KD I R K +  ++  YVPGWD HGLPIE ++ ++  + 
Sbjct: 70  HDGPPYANGNIHMGHAMNKISKDFIVRSKSMMGFRAPYVPGWDTHGLPIEQQLKKAGVD- 128

Query: 215 AKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQM 274
            +K L+ ++ R    ++A   V  Q   FKR GV  +W+NPYLTL PEYEA QI VFG+M
Sbjct: 129 -RKALSVAEFREMCRQYALEQVDKQRKDFKRLGVAGEWDNPYLTLKPEYEAQQIRVFGKM 187

Query: 275 SLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL 334
           + +G IY+GKKPV WS SS +ALAEAE+EY +     + Y             G+L+E  
Sbjct: 188 AEKGLIYKGKKPVFWSWSSESALAEAEVEYHDVTSPSAFYG-----EQVVDGKGVLDE-- 240

Query: 335 PDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQK 394
            +  + VWTTTPWT+PA+  + ++A   YAVV+                        D++
Sbjct: 241 -NTYMVVWTTTPWTIPASEGITIDATFDYAVVQHDD---------------------DER 278

Query: 395 KVFIIVASDLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTE 453
           K   ++A+DLV      +G   + I KT+ G++LEN    HP    +  V + GD++TT+
Sbjct: 279 K--YVLAADLVNADAELFGWNDVKIVKTVKGAELENVLCQHPFYPERKLVTMLGDFVTTD 336

Query: 454 SGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVK 512
           +GTGLVHTAPG G++D+   +KYGL +  PVDD+G  TE+ G+ F+GL    D N   +K
Sbjct: 337 AGTGLVHTAPGFGEDDFNIGVKYGLDVYVPVDDKGYMTEDTGEDFAGL-FYEDANEVSLK 395

Query: 513 YLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            L+E   L+ +  YEH YP+DWRTKKP IFRAT QWFASV+  R   + AI +V++ P
Sbjct: 396 KLEEAGVLLKQMDYEHSYPFDWRTKKPIIFRATPQWFASVDKIRDQILGAINEVQFFP 453



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 103/167 (61%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GA+++RLWV SVD + DV +     +Q+++ YRK R T+R+LL N  D+  
Sbjct: 624 VPSEVIDKMGAEIIRLWVLSVDTSADVRVSMGSFQQIAESYRKFRNTVRFLLANTTDFDP 683

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N++++D++  ID+Y    +    K I ++Y +Y+F +I++ +  FI  DLS FY DVA
Sbjct: 684 AKNAVAFDEMESIDKYMTVLVNKFTKEILDAYANYEFMEIYKKLINFITTDLSAFYMDVA 743

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RRS QTVL   ++ + +++ PILPH  E++W+ L
Sbjct: 744 KDVVYIEAPDSKKRRSMQTVLYDVVVRLTKLMTPILPHTTEEIWKYL 790


>gi|312869509|ref|ZP_07729664.1| isoleucine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094956|gb|EFQ53245.1| isoleucine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 931

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 210/470 (44%), Positives = 292/470 (62%), Gaps = 40/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L +T F MR    V E +  +LW++++V+      N+G+ +FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGRTKFPMRGKLPVTEAQREQLWEENKVYQLRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHA+NKI KD I RYK +  Y+  YVPGWD HGLPIE ++ +S  +  +K ++ S+
Sbjct: 62  NIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQLTKSGYD--RKKMSTSE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    K+A   V  Q   FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ 
Sbjct: 120 FRDLCRKYALEQVDKQRTDFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQA 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD-LGLAVW 342
           KKPV+WS SS +ALAEAE+EY   H   +  A F    A     G  N+ L D   L VW
Sbjct: 180 KKPVYWSWSSESALAEAEVEY---HDVVAKTAFF----AEQVKDG--NDILDDNTYLVVW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWTVPA+ AVAVN K  Y+VV+           PAN   +             +VA+
Sbjct: 231 TTTPWTVPASEAVAVNGKFDYSVVK-----------PANDDRQ------------FVVAT 267

Query: 403 DLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           DL+  +  K G     + K L+G+DL+     HP  +R   +V   DY+T ++GTGLVHT
Sbjct: 268 DLLDGVADKLGWEDFEVVKHLSGNDLDGMVTKHPYIDRNI-LVGTADYVTADAGTGLVHT 326

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSL 520
           APG+G +DY   L++ LPI +P++D+G  T+E G  F G+    D +   +K L+E  SL
Sbjct: 327 APGYGDDDYHFGLEHNLPIFAPINDQGVLTKENGADFDGV-FYQDADDISLKKLEEAGSL 385

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++EEP +H YP+DWRTKKP IFRAT+QWF S++  RQ  +DA+ +V + P
Sbjct: 386 LLEEPLKHSYPFDWRTKKPIIFRATDQWFVSIDKMRQDILDALEEVNYQP 435



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/156 (41%), Positives = 101/156 (64%), Gaps = 1/156 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D++   +++SY+ 
Sbjct: 615 GAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTGDFKPTDDTVSYEK 674

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY L +L + +K +R  +++Y F   ++++  F+  DLS FY ++AKD LY    
Sbjct: 675 LNSVDQYMLVKLNHFLKEMRADFDNYDFLDAYKLLINFVNNDLSAFYMNLAKDVLYIEPA 734

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQ 732
            S  RRS QTV    LL++V+++ PILPH  E+VW+
Sbjct: 735 DSHARRSMQTVFYNILLTMVKLLTPILPHTTEEVWE 770


>gi|86156442|ref|YP_463227.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85772953|gb|ABC79790.1| Isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 946

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 214/496 (43%), Positives = 292/496 (58%), Gaps = 55/496 (11%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG----ENFVLHDGPPYAN 162
           K++V+LPKT F M+AN   REPEI + W++  +F R+  +N G    + FVLHDGPPYAN
Sbjct: 4   KYSVNLPKTDFPMKANLPQREPEILRQWEEQAIFQRLVAQNAGRPGAKRFVLHDGPPYAN 63

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G++H+GHALNKILKD++ +Y+ L      Y+PGWDCHGLPIELKV + L    ++   P+
Sbjct: 64  GDIHIGHALNKILKDVVVKYRNLNGEVADYIPGWDCHGLPIELKVDKELGPKKRELDRPA 123

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
            + A   K+A+  ++ Q  SFKR GV+  W  PY T+   YEA  +  F + + +G++YR
Sbjct: 124 IIEA-CRKYAQKWIEKQRESFKRLGVFGRWETPYATMSRGYEAEIVRTFARAAEKGFLYR 182

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG---- 338
           GKKPV+W  + RTALAEAE+EY E H S SIY  F +VS  P          P L     
Sbjct: 183 GKKPVYWCITDRTALAEAEVEY-EQHRSPSIYVAFDLVSKLPD---------PKLAGRPA 232

Query: 339 -LAVWTTTPWTVPANAAVAVNAKLQY--------AVVEIQSLLEGDSAAPANKKSRPGNV 389
            L +WTTTPWT+PAN AVA + +  Y         VV  + LL G  A          +V
Sbjct: 233 RLVIWTTTPWTLPANLAVAAHPEFTYVAYDLNGQVVVVAKDLLAGFLA----------DV 282

Query: 390 LKDQKKVFIIVASDLVPTLEAKWGTKLVI--------KKTLA---GSDLENCRYVHPVDN 438
              +  V  + A    P  EA  G    +        ++ LA   GS LE  RY HP  +
Sbjct: 283 APGELSVTDVPAPHSPPAHEAATGGGGTVLAPHLAHPERVLAHLDGSALEGLRYRHPFLD 342

Query: 439 RQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFS 498
           R+  V++ GD++T E+GTGLVHTAPGHGQEDYV  L+YGL +L+PVD  G+FTE AGK++
Sbjct: 343 RESQVIL-GDHVTLEAGTGLVHTAPGHGQEDYVVGLRYGLEVLNPVDGAGRFTERAGKYA 401

Query: 499 GLDVLGDGNVAVVKYLDEQMSLIME--EPYEHKYPYDWRTKKPTIFRATEQWFASVE--G 554
           G  +  + N  +V  L     L+ +     EH YP+ WR   P +FRAT+QWF S+E   
Sbjct: 402 GKKIF-EANPEIVADLAASGHLLSDPKASLEHSYPHCWRCHNPVVFRATDQWFLSLEHAD 460

Query: 555 FRQAAMDAIGQVKWVP 570
            R+A +  I +V+W+P
Sbjct: 461 LRKATLAEIDRVRWIP 476



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 97/160 (60%), Gaps = 1/160 (0%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLWVS+ DY  D+ +G Q+L  +++ YRK+R T+RY LG L  +    +++   
Sbjct: 654 YGADILRLWVSASDYRDDIGLGDQILAGLAEGYRKIRNTIRYALGALDGFDPARDAVPEA 713

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  ID++AL +L    + + ++YE Y+F   +    +F  V+LS  YFDV KDRLYT  
Sbjct: 714 ELEPIDRWALARLAAWDEKVAKAYEDYEFHLAYHATMQFCAVELSALYFDVIKDRLYTWK 773

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
                RRS QT L A    ++R++APIL   A + W  LP
Sbjct: 774 ADGRQRRSAQTALHAIAQDLIRLLAPILSFTASEAWSYLP 813


>gi|406983150|gb|EKE04397.1| hypothetical protein ACD_20C00084G0017 [uncultured bacterium]
          Length = 945

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 194/478 (40%), Positives = 290/478 (60%), Gaps = 34/478 (7%)

Query: 100 KKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLR-VADKNDGENFVLHDGP 158
           +K++  YK T++LP+T F M+ANA VRE E+ K W+++ ++ + ++ + + E FVLHDGP
Sbjct: 3   EKQKVDYKTTLNLPQTDFKMKANAAVREVELQKYWEENNIYEKNISQRKNSEKFVLHDGP 62

Query: 159 PYANGN-LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKK 217
           PY + N +H+G ALNKILKDI+ +YK    +   YVPG+D HGLPIE  V++S+ +  ++
Sbjct: 63  PYLSSNKIHIGTALNKILKDIVTKYKAQSGFYSPYVPGYDGHGLPIENAVVKSI-KGGRE 121

Query: 218 DLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQ 277
            +TP +LR K  +FA   +K Q  +FKR GVW +W +PY+T+ P++EA Q+ +FG++  +
Sbjct: 122 AITPEELRKKCREFAMTNLKGQEENFKRLGVWGNWEHPYVTISPDFEAEQVRIFGEIHKK 181

Query: 278 GYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD- 336
           GY+Y+G KPV+W     TALAEAE+EY + H S S+Y  F   +     +    E   D 
Sbjct: 182 GYVYKGLKPVYWCADCETALAEAEVEYAD-HKSHSVYVKFTFENEEAKKAYQTAELNIDN 240

Query: 337 -LGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
            L + +WTTTPWT+PAN A+ ++ +LQYA V+                       K+ ++
Sbjct: 241 PLSMVIWTTTPWTLPANLAICLHPRLQYAFVQ-----------------------KEGEQ 277

Query: 396 VFIIVASDLVPTL--EAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITT 452
              I+A DL+ +      W      I  T  G   E     HP+ +R   ++I G+++TT
Sbjct: 278 EVYIIAVDLMESFATNVSWEENGFKILGTSTGDKFEYLNAKHPLFDRN-SLIILGEHVTT 336

Query: 453 ESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVK 512
           E+GTG VHTAPGHG EDY    +Y + +LSP+ ++G FTE+AG+F G+      N  +V+
Sbjct: 337 EAGTGAVHTAPGHGLEDYEVGTRYRIGVLSPLTNKGIFTEDAGQFQGMR-YDKANEVIVQ 395

Query: 513 YLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            L ++ +L+      H YP+ WR K P I+RATEQWF  V  FR  A+ AI  VKW+P
Sbjct: 396 ELRDKNALLGYGEILHSYPHCWRCKHPVIYRATEQWFIDVNAFRADALKAINDVKWIP 453



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 95/235 (40%), Positives = 141/235 (60%), Gaps = 13/235 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           ++G  +    ++G V  V PQ     YGADVLRLW +SVDYT DV I   +++Q+ ++YR
Sbjct: 611 LDGSGRKMSKSLGNV--VEPQTIINKYGADVLRLWTASVDYTNDVRISENIIQQLVEVYR 668

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+LLGNL+D+    N + Y +L  ID+YAL +L+ +V+++  +++ Y+F++ +Q
Sbjct: 669 KVRNTSRFLLGNLYDFDPAANCVEYANLSDIDKYALHKLQKLVESVSTAFDKYEFYRYYQ 728

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
           +IQ F   D S+FY D+ KDRLYT G  S  RRS QTVL   L  + R++ P+ PHLAED
Sbjct: 729 LIQNF-TSDFSSFYLDIVKDRLYTAGKDSLARRSSQTVLFETLHVLARLLVPVTPHLAED 787

Query: 730 VWQNLPFAYTL-EDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVT 783
           VW      Y L       E +  S WP +  ++    V +   W  I E+  +VT
Sbjct: 788 VW-----LYVLPSQKGNIESILLSDWPRVKPEYLNNEVNDK--WNAIAELREIVT 835


>gi|384500360|gb|EIE90851.1| hypothetical protein RO3G_15562 [Rhizopus delemar RA 99-880]
          Length = 942

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 224/555 (40%), Positives = 309/555 (55%), Gaps = 57/555 (10%)

Query: 95  AAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDH---QVFLRVADKNDGEN 151
           ++ G K +E  Y  T+ LPKT+F +RANA  RE     L+ D     ++      N  + 
Sbjct: 36  SSTGLKAKENPYTKTLLLPKTSFPLRANAATRE----HLFRDRCTKDLYPWQLKNNPKDT 91

Query: 152 FVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL 211
           F+LHDGPPYANGN+H GHALNKI+KDIINR+KLLQ +K+ Y PGWDCHGLPIELK L+ +
Sbjct: 92  FILHDGPPYANGNVHAGHALNKIVKDIINRHKLLQGHKIYYRPGWDCHGLPIELKALEQI 151

Query: 212 DEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVF 271
            ++ +  L+  ++R  A   A   V  Q   F  +G+  DW NPYLTL  ++E  Q+ V 
Sbjct: 152 RQN-ESTLSAVEIRKLAKSKALFEVDKQKKDFMSWGIMGDWENPYLTLTKDFEMRQLVVL 210

Query: 272 GQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLN 331
            +M  +GYIYR  KPV+WSPSS++ALAEAELEY E HVS S+Y  F     P       +
Sbjct: 211 REMIKKGYIYRQLKPVYWSPSSKSALAEAELEYKENHVSTSLYVQF-----PIKVDCWKD 265

Query: 332 EFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLK 391
           + +  L   +WTTTPWT+P+N A+ V+ +L Y +V+ Q+                     
Sbjct: 266 KQVHAL---IWTTTPWTLPSNRAICVHPELDYHLVQSQT--------------------- 301

Query: 392 DQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYIT 451
                  I+  D +  L+ +   +L +  T+ GS L    Y HP+   Q P V+ G ++T
Sbjct: 302 ---GQHWIIGKDRLEALQEELDQRLTVLDTVKGSALVGSSYQHPISKEQYP-VLAGKHVT 357

Query: 452 TESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAV 510
            ESGT LVHTAPGHG EDY   L   +   S VD+EGKFT EAG +F G     +GN  V
Sbjct: 358 AESGTALVHTAPGHGLEDYEVCLANNIQPFSWVDEEGKFTSEAGPQFEGKFAFREGNETV 417

Query: 511 VKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++ LD   S++ +  Y HKYPYDWRTK+P + RAT QWFA+VE  ++ A  +I  +  V 
Sbjct: 418 IELLD--ASIVKKSDYTHKYPYDWRTKQPVMLRATAQWFANVEDLQKKAT-SINHIIQVL 474

Query: 571 PQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGN 630
            ++    G D    W    D    V + P+  RQ   IY++   T+     +   W +  
Sbjct: 475 TEK----GTDA--WWEEEDDL---VFVAPE-YRQDGKIYKRGYDTMDVWFDSGTSWTMLQ 524

Query: 631 SISYDDL--PMIDQY 643
            +   DL  P+ D Y
Sbjct: 525 GLFERDLSKPVADVY 539



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/217 (38%), Positives = 124/217 (57%), Gaps = 6/217 (2%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           ++ P YG+DVLRLWV++ DYT D+ IGP ++  +SD  RK+R T R+LLGNLHD+ + + 
Sbjct: 585 KKNPAYGSDVLRLWVANCDYTKDMTIGPSIIATISDHLRKIRTTARFLLGNLHDFDLKHY 644

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           + Y+ L  IDQY L +L     N+  + + Y F K  Q +Q F    LS+FYFDV KDRL
Sbjct: 645 VDYNHLQEIDQYMLHELYKYNHNVTTAMDDYSFNKAVQHVQNFTNNTLSSFYFDVIKDRL 704

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 751
           Y    ++ +RR  QTVL   L S    I+P + H AE++++N    Y     +    VF+
Sbjct: 705 YNESQSALSRRMAQTVLYEVLKSYTTSISPFVCHTAEEIYEN----YRQLTPAPQSSVFK 760

Query: 752 SKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNET 788
           + W   D+KW    + E   W  +L +   V  + E+
Sbjct: 761 TGWLYSDDKWNNTVLNEK--WSMLLNLKSEVNQIIES 795


>gi|335429595|ref|ZP_08556493.1| isoleucyl-tRNA synthetase [Haloplasma contractile SSD-17B]
 gi|334889605|gb|EGM27890.1| isoleucyl-tRNA synthetase [Haloplasma contractile SSD-17B]
          Length = 912

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/469 (42%), Positives = 285/469 (60%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANG 163
            YK T+ +PKT F MR N   REPE+ K W++  ++ ++ +KN D   ++LHDGPPYANG
Sbjct: 4   EYKDTLLMPKTDFKMRGNLGNREPELQKHWEEMDLYHKIIEKNNDKPTYILHDGPPYANG 63

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNK+LKD + R+K +  +K  Y+PGWD HGLPIE   L    +  +K+L+PS+
Sbjct: 64  NIHMGHALNKVLKDFVVRFKNMSGFKSPYIPGWDTHGLPIE-TALTKKKKVKRKELSPSE 122

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K A++A   V+ Q   FKR GV  +W  PY+TL   YEA Q+++F +M  +G IY+G
Sbjct: 123 FREKCAEYALEQVENQKEQFKRLGVMGEWEQPYITLQKNYEARQLKLFAKMVEKGLIYKG 182

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            +PV+WS SS TALAEAE+EY +   S +IY  F ++       G       D    +WT
Sbjct: 183 LRPVYWSWSSETALAEAEIEYHDKK-SPAIYVAFNVMDGKGVLDG-------DEQFIIWT 234

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+ ++ +L+Y+VV    L++G+                       IVASD
Sbjct: 235 TTPWTIPANLAICLHPELEYSVV----LVDGNK---------------------YIVASD 269

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           LV +L  E +W     I KT  G++LE+ +  HP+ +R   + + G+++T ++ TG VHT
Sbjct: 270 LVESLTEEFEWSNPKTI-KTYQGAELEHVKTKHPLYDRVSLITL-GEHVTADA-TGCVHT 326

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++D+    +YGL  L PVDD G  T+EA  F GL +    N A+ + L+   +LI
Sbjct: 327 APGHGEDDFNIGKQYGLEPLCPVDDRGIMTKEAPGFEGLHI-DKANKAITEKLEATGALI 385

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                 H YP+DWRTKKP IFR T QW+AS++G +   M  I  VKW+P
Sbjct: 386 KLSFINHSYPHDWRTKKPIIFRVTPQWYASIDGLKDTMMKEIESVKWLP 434



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 103/159 (64%), Gaps = 1/159 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWVSSVDY  DV I   +++Q+++ YRK R T R+LLGNLHD+    + + Y+ 
Sbjct: 613 GADILRLWVSSVDYQADVRISDNMMKQIAESYRKFRNTFRFLLGNLHDFDPKSDYVDYEK 672

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
              +DQY   +L ++VK +  +YE+++F  +++ +  ++   LS+FY D  KD LY    
Sbjct: 673 RNEVDQYVTCKLNDLVKEVLHAYENFEFDVVYRKMTNYVTQFLSSFYLDFTKDILYIEKD 732

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
            S  RRS Q+VL  ++  + R++APIL H  ++V+Q +P
Sbjct: 733 NSLDRRSIQSVLYDNIDRLSRLLAPILSHTTDEVYQYIP 771


>gi|345329562|ref|XP_001511676.2| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like
           [Ornithorhynchus anatinus]
          Length = 1007

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/427 (44%), Positives = 266/427 (62%), Gaps = 26/427 (6%)

Query: 145 DKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIE 204
           ++   E+F LHDGPPYANG+ H+GHALNKILKDI NR+ +++  KV YVPGWDCHGLPIE
Sbjct: 97  ERKSKEDFCLHDGPPYANGDPHIGHALNKILKDIANRFHMMRGSKVHYVPGWDCHGLPIE 156

Query: 205 LKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYE 264
           LK L     D +  L+P ++R KA +FAKA +  Q ++F R+GV ADW+N Y T D +YE
Sbjct: 157 LKALSEFGGDTQS-LSPMEIREKAREFAKAAIAKQKSAFIRWGVMADWDNCYYTFDGKYE 215

Query: 265 AAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPP 324
           A Q++VF QM  +G +YR  KPV WSPS+RTALAEAELEY   HVSRS+Y  F +++ PP
Sbjct: 216 ARQLKVFHQMYDKGLVYRDFKPVFWSPSARTALAEAELEYVPEHVSRSVYVRFPLLNPPP 275

Query: 325 STSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKS 384
             + LL+   P + + +WTT PWT+PAN AV    KL+Y++V+  +  E           
Sbjct: 276 QLASLLDGSSP-VSVLIWTTQPWTIPANQAVCYMPKLKYSLVKCSNSGE----------- 323

Query: 385 RPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVV 444
                         I+ ++ V ++ A +GTK  +  T  G+DLE+    HP    +   +
Sbjct: 324 ------------LYILGAERVGSVAATFGTKFEVISTFVGADLESGSCAHPTIPGRVSPL 371

Query: 445 IGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVL 503
           +  +++T  +GTGLVHTAP HG EDY  +  + L +   VD+ G FTE AG +     VL
Sbjct: 372 LPANHVTMTAGTGLVHTAPAHGMEDYSVASDHKLSMDCLVDENGVFTEGAGSELQNKSVL 431

Query: 504 GDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
            +G   V+K L    +L+ EE + H YPYDWRTKKP I RA++QWF ++   +  A + +
Sbjct: 432 EEGTDIVIKMLQSASNLLKEEKFIHSYPYDWRTKKPVIIRASKQWFVNISDIKATAKELL 491

Query: 564 GQVKWVP 570
            +VK++P
Sbjct: 492 KKVKFIP 498



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 108/189 (57%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   DV IG   L    +   KLR T+R+LLGNL  +     SI 
Sbjct: 684 PPYGADVLRWWVADSNVFADVTIGSASLAAAREDVNKLRNTVRFLLGNLAGFNPETESIP 743

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +++ +IDQ+ L  L++    + E+Y+ Y F K+ + +Q F   +LS FYF + KDRLY 
Sbjct: 744 TEEMYVIDQFMLHLLQDFANKVTEAYKQYDFGKVIRQLQVFQNRELSKFYFSIIKDRLYC 803

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
            G     RRSCQTVL+  L  +VR  APILPHLAE+V+Q+LPF          + VF + 
Sbjct: 804 EGEKDPKRRSCQTVLAEILDVVVRSFAPILPHLAEEVFQHLPFE------KEPKGVFRTG 857

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 858 WCSTSPVWK 866


>gi|410986531|ref|XP_003999563.1| PREDICTED: LOW QUALITY PROTEIN: isoleucine--tRNA ligase,
           mitochondrial [Felis catus]
          Length = 1012

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 203/476 (42%), Positives = 282/476 (59%), Gaps = 29/476 (6%)

Query: 99  EKKEEGRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLH 155
           +    GRY+ TV LP+T+F M+     +   E EI +     +++    ++     F LH
Sbjct: 52  QNSSNGRYRDTVLLPQTSFPMKLLGRQQPDTELEIQQKCGFSELYSWQRERKVKTEFCLH 111

Query: 156 DGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA 215
           DGPPYANG+ H+GHALNKILKDI NRY +++  K+ +VPGWDCHGLPIE+KVL  L   A
Sbjct: 112 DGPPYANGDPHVGHALNKILKDIANRYHMMRGSKIHFVPGWDCHGLPIEIKVLSELGGKA 171

Query: 216 KKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMS 275
           + +L+  ++R KA  FA A ++ Q ++F R+G+ ADWNN Y T D +YEA Q+ +F QM 
Sbjct: 172 Q-NLSAVEIREKARSFAAAAIEKQRSAFIRWGIMADWNNCYYTFDGKYEAKQLRLFYQMY 230

Query: 276 LQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP 335
            +G IYR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P    L++   P
Sbjct: 231 EKGLIYRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLVSLIDGSSP 290

Query: 336 DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
            +   VWTT PWT+PAN AV      +YAVV               K S+ G++      
Sbjct: 291 -VSFLVWTTQPWTIPANQAVCYMPDSKYAVV---------------KCSKSGDLY----- 329

Query: 396 VFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESG 455
              I+A+D V ++ +   T L +  T +G DLEN    HP+   +   ++  +++T   G
Sbjct: 330 ---ILAADKVTSIASVLETTLEVISTFSGVDLENGTCTHPLIPGKASPLLPANHVTMTKG 386

Query: 456 TGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYL 514
           TGLVHTAP HG EDY  + ++ L     VD++G FTE AG +     VL +G   V+K L
Sbjct: 387 TGLVHTAPAHGMEDYSVASQHNLSTDCLVDEDGVFTEVAGPELENKAVLEEGTDVVIKML 446

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                L+ EE   H YPYDWRTKKP + RA++QWF ++   +  A + + +VK++P
Sbjct: 447 QASKHLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNITDIKATAKELLKKVKFIP 502



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 77/189 (40%), Positives = 110/189 (58%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP  L    D   KLR TLR+LLGN+  +    ++I 
Sbjct: 688 PPYGADVLRWWVAESNVFTEVTIGPAALNAARDDINKLRNTLRFLLGNVSGFNPETDAIP 747

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I +SY+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 748 VNDMYVIDQYMLHLLQDLANKITDSYKQYDFGKVVRLLRAFYTRELSNFYFSIIKDRLYC 807

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L+  L  +VR  APILPHLAE+ +Q++P+          + VF + 
Sbjct: 808 ESAGDPGRRSCQTALAEILDVMVRSFAPILPHLAEEAFQHIPYV------KEPKSVFRTG 861

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 862 WIRTSSIWK 870


>gi|167623065|ref|YP_001673359.1| isoleucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189082332|sp|B0TJA9.1|SYI_SHEHH RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|167353087|gb|ABZ75700.1| isoleucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 940

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 194/470 (41%), Positives = 289/470 (61%), Gaps = 30/470 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVAD-KNDGENFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W+++ ++ ++ + + D + F+LHDGPPYANG+
Sbjct: 4   YKSTLNLPETEFPMRGNLANREPEMLKSWNENGLYQQIRESRKDAKPFILHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH++NKILKDII + K +  +   Y+PGWDCHGLPIELKV Q + +   K +T ++ 
Sbjct: 64  IHIGHSVNKILKDIIIKSKTMSGFDAPYIPGWDCHGLPIELKVEQKVGKPGHK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V  Q   F R GV+ADW NPYLT+D   EA  +    ++   G++++G 
Sbjct: 123 RQKCREYAAKQVDGQREDFIRLGVFADWQNPYLTMDFSTEANIVRSLSKVIENGHLHKGV 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL-LNEFLPDLGLAVWT 343
           KPVHW     +ALAEAE+EY E  +S +I   F  V      +   L ++  ++ + +WT
Sbjct: 183 KPVHWCTDCGSALAEAEVEY-EDKMSPAIDVAFTAVDKSALLAKFGLADYAHNISMVIWT 241

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+AV A ++Y +VE+                     +KD +   +++A+D
Sbjct: 242 TTPWTLPANRALAVAANVEYTLVEM---------------------VKDGQTQALVLATD 280

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L  +   ++G +   +  T+AGSDLE  R+ HP  +   PV++ GD++T +SGTG+VHTA
Sbjct: 281 LYESCIERFGAESHTVLGTVAGSDLELLRFNHPFYDFDVPVIL-GDHVTVDSGTGVVHTA 339

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHGQ+D+V   KYGL + +PV D G +  +   F+GL V    N  VV+ L+E+ +L+ 
Sbjct: 340 PGHGQDDFVVGQKYGLEVANPVGDNGVYKPDTEIFAGLHVF-KANKNVVELLEEKGALLS 398

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
               +H YP+ WR K P IFRAT QWF S++  G R  A+  I Q KW+P
Sbjct: 399 HVQIKHSYPHCWRHKTPIIFRATPQWFISMDQKGLRTQAISEIEQTKWIP 448



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 121/206 (58%), Gaps = 11/206 (5%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    ++G V  + PQ      GAD+LRLWV++ DY+G++ +  Q+L + +D Y
Sbjct: 598 TVDGQGRKMSKSVGNV--ISPQHVTNKLGADILRLWVAATDYSGEMTVSDQILNRSADAY 655

Query: 610 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL N++ +  V + ++ +D+  +D++ + +   + + + E+Y+ Y F  + 
Sbjct: 656 RRIRNTARFLLANINGFDPVSDMVAIEDMVALDRWVVRRAAALQQELLEAYDEYNFHLVT 715

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + +F  V+L +FY D+ KDR YT    S  RRSCQ+ L     ++VR IAPIL   A+
Sbjct: 716 QKLMQFCSVELGSFYLDIIKDRQYTAKGDSNARRSCQSALYLISEAMVRWIAPILSFTAD 775

Query: 729 DVWQNLPFAYTLEDGSAAEFVFESKW 754
           ++W+ LP       G   E+VF   W
Sbjct: 776 EIWKLLP-------GERGEYVFTETW 794


>gi|417788478|ref|ZP_12436161.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius NIAS840]
 gi|334308655|gb|EGL99641.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius NIAS840]
          Length = 931

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 288/469 (61%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MR N  VRE E    W++++V+ +    N+G+ +FVLHDGPPYANG
Sbjct: 2   KVKDTLNLGKTKFPMRGNLPVREVERQNEWEENKVYEQRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHA+NKI KD I R K +  ++  YVPGWD HGLPIE ++ ++  +  +K L+ ++
Sbjct: 62  NIHMGHAMNKISKDFIVRSKSMMGFRAPYVPGWDTHGLPIEQQLKKAGVD--RKALSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   FKR GV  +W+NPYLTL PEYEA QI VFG+M+ +G IY+G
Sbjct: 120 FREMCRQYALEQVDKQRKDFKRLGVAGEWDNPYLTLKPEYEAQQIRVFGKMAEKGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +ALAEAE+EY +     + Y             G+L+E   +  + VWT
Sbjct: 180 KKPVFWSWSSESALAEAEVEYHDVTSPSAFYG-----EQVVDGKGVLDE---NTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + ++A   YAVV+                        D++K   ++A+D
Sbjct: 232 TTPWTIPASEGITIDATFDYAVVQHDD---------------------DERK--YVLAAD 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV      +G   + I KT+ G++LEN    HP    +  V + GD++TT++GTGLVHTA
Sbjct: 269 LVNADAELFGWNDVKIVKTVKGAELENVLCQHPFYPERKLVTMLGDFVTTDAGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D+   +KYGL +  PVDD+G  TE+ G+ F+GL    D N   +K L+E   L+
Sbjct: 329 PGFGEDDFNIGVKYGLDVYVPVDDKGYMTEDTGEDFAGL-FYEDANEVSLKKLEEAGVLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +  YEH YP+DWRTKKP IFRAT QWFASV+  R   + AI +V++ P
Sbjct: 388 KQMDYEHSYPFDWRTKKPIIFRATPQWFASVDKIRDQILGAINEVQFFP 436



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 103/167 (61%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GA+++RLWV SVD + DV +     +Q+++ YRK R T+R+LL N  D+  
Sbjct: 607 VPSEVIDKMGAEIIRLWVLSVDTSADVRVSMGSFQQIAESYRKFRNTVRFLLANTTDFDP 666

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +++++D++  ID+Y    +    K I ++Y +Y+F +I++ +  FI  DLS FY DVA
Sbjct: 667 AKDAVAFDEMESIDKYMTVLVNKFTKEILDAYANYEFMEIYKKLINFITTDLSAFYMDVA 726

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RRS QTVL   ++ + +++ PILPH  E++W+ L
Sbjct: 727 KDVVYIEAPDSKKRRSMQTVLYDVVVRLTKLMTPILPHTTEEIWKYL 773


>gi|421769067|ref|ZP_16205776.1| Isoleucyl-tRNA synthetase [Lactobacillus rhamnosus LRHMDP2]
 gi|421771330|ref|ZP_16207990.1| Isoleucyl-tRNA synthetase [Lactobacillus rhamnosus LRHMDP3]
 gi|411185463|gb|EKS52591.1| Isoleucyl-tRNA synthetase [Lactobacillus rhamnosus LRHMDP2]
 gi|411185916|gb|EKS53042.1| Isoleucyl-tRNA synthetase [Lactobacillus rhamnosus LRHMDP3]
          Length = 928

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 203/469 (43%), Positives = 284/469 (60%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ KTTF MRA     EP   K WD+  V+ +    N+G+  F+LHDGPP+ANG
Sbjct: 2   KIKDTLNMGKTTFPMRAGLPKNEPIWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K+++ + 
Sbjct: 62  NIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVK--RKEMSMTD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA   +  Q   FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G
Sbjct: 120 YRELCRQFAMKEIDKQRTDFKRLGVMGDWEHPYITLQHAYEASEIRVFGAMAKKGYIYHG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS + LAEAE+EY +   S SIY  F +V       G+L++   D  L +WT
Sbjct: 180 LKPVYWSWSSESTLAEAEIEYHDDK-SPSIYVAFPVVDG----KGILDQ---DTSLVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN +  Y  V++                       +QK V   VA++
Sbjct: 232 TTPWTIPANYGIAVNPRFDYVQVQV----------------------GEQKYV---VAAE 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    ++ KT  G++++     HP+ +R   +V+  D++T ++GTGLVHT
Sbjct: 267 LLDRVAEEVGWEQPKIL-KTFKGTEMDKMTAKHPLYDRTS-LVMNADHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY   +KYGLP++S VD +G   E A  F G+    D N  V K LDE+ +L+
Sbjct: 325 APGHGEDDYKVGMKYGLPVISVVDAKGYLNENAPGFEGV-FYDDANKLVTKALDEKGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS+E FR   + AI  V + P
Sbjct: 384 KLDFFTHSYPHDWRTKKPVIFRATTQWFASIEAFRDQILKAIDTVDFKP 432



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/167 (39%), Positives = 105/167 (62%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R TLR+++ N  D+  
Sbjct: 603 VPSTIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTLRFMVANTGDFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++YD L  +D+Y L +L  ++ N++E+Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDAVAYDQLGSVDRYLLVRLNQVIANVKEAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y        RRS QTV+   LL + +++ PILPH AE+VW  L
Sbjct: 723 KDVVYIEAANDPKRRSMQTVMYTALLDLTKLLTPILPHTAEEVWPYL 769


>gi|417810109|ref|ZP_12456789.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius GJ-24]
 gi|335349981|gb|EGM51479.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius GJ-24]
          Length = 931

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 288/469 (61%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MR N  VRE E    W++++V+ +    N+G+ +FVLHDGPPYANG
Sbjct: 2   KVKDTLNLGKTKFPMRGNLPVREVERQNEWEENKVYEQRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHA+NKI KD I R K +  ++  YVPGWD HGLPIE ++ ++  +  +K L+ ++
Sbjct: 62  NIHMGHAMNKISKDFIVRSKSMMGFRAPYVPGWDTHGLPIEQQLKKAGVD--RKALSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   FKR GV  +W+NPYLTL PEYEA QI VFG+M+ +G IY+G
Sbjct: 120 FREMCRQYALEQVDKQRKDFKRLGVAGEWDNPYLTLKPEYEAQQIRVFGKMAEKGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +ALAEAE+EY +     + Y             G+L+E   +  + VWT
Sbjct: 180 KKPVFWSWSSESALAEAEVEYHDVTSPSAFYG-----EQVVDGKGVLDE---NTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + ++A   YAVV+                        D++K   ++A+D
Sbjct: 232 TTPWTIPASEGITIDATFDYAVVQHDD---------------------DERK--YVLAAD 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV      +G   + I KT+ G++LEN    HP    +  V + GD++TT++GTGLVHTA
Sbjct: 269 LVNADAELFGWNDVKIVKTVKGAELENVLCQHPFYPERKLVTMLGDFVTTDAGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D+   +KYGL +  PVDD+G  TE+ G+ F+GL    D N   +K L+E   L+
Sbjct: 329 PGFGEDDFNIGVKYGLDVYVPVDDKGYMTEDTGEDFAGL-FYEDANEVSLKKLEEAGVLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +  YEH YP+DWRTKKP IFRAT QWFASV+  R   + AI +V++ P
Sbjct: 388 KQMDYEHSYPFDWRTKKPIIFRATPQWFASVDKIRDQILGAINEVQFFP 436



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 104/167 (62%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GA+++RLWV SVD + DV +  +  +Q+++ YRK R T+R+LL N  D+  
Sbjct: 607 VPSEVIDKMGAEIIRLWVLSVDTSADVRVSMESFQQIAESYRKFRNTVRFLLANTTDFDP 666

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +++++D++  ID+Y    +    K I ++Y +Y+F +I++ +  FI  DLS FY DVA
Sbjct: 667 AKDAVAFDEMESIDKYMTVLVNKFTKEILDAYANYEFMEIYKKLINFITTDLSAFYMDVA 726

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RRS QTVL   ++ + +++ PILPH  E++W+ L
Sbjct: 727 KDVVYIEAPDSKKRRSMQTVLYDVVVRLTKLMTPILPHTTEEIWKYL 773


>gi|406670579|ref|ZP_11077824.1| isoleucine-tRNA ligase [Facklamia hominis CCUG 36813]
 gi|405582095|gb|EKB56101.1| isoleucine-tRNA ligase [Facklamia hominis CCUG 36813]
          Length = 927

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 207/470 (44%), Positives = 283/470 (60%), Gaps = 39/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANG 163
           + K T++L +T F MRAN   +E E+   W++  ++ ++ +KN   E +VLHDGPPYANG
Sbjct: 2   KLKETLNLGQTDFAMRANLPNKEKELQVEWEEADLYQKIQEKNISREPWVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            +HMGHALNKI KD I RYK +  Y+  YVPGWD HGLPIE   LQ      +K+ + + 
Sbjct: 62  KIHMGHALNKITKDFIVRYKSMSGYRSPYVPGWDTHGLPIE-TALQKNKGINRKEYSITD 120

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   VK QM +FKR GV  DW++PYLTL PEYEA QI VF +M+ +GYIY+G
Sbjct: 121 FRDLCKEYALEQVKGQMKTFKRLGVSGDWDHPYLTLAPEYEAQQIRVFAKMAEKGYIYKG 180

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV WS SS ++LAEAE+EY +   S SIY  F++       +G+++E        +WT
Sbjct: 181 AKPVFWSWSSESSLAEAEVEY-QDVTSPSIYVAFKVRKG----NGVVDE---QAEFVIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+A      Y  V++                       D++    IVA +
Sbjct: 233 TTPWTLPANMAIAALKAATYVQVKV-----------------------DERH--FIVAQE 267

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ ++  + G     I+KT  G   E     HP  +R   +V  GD++T +SGTGLVHTA
Sbjct: 268 LLESIAKEIGWQDYSIEKTYKGEQFEGVEAQHPFYDRPSKLVF-GDHVTLDSGTGLVHTA 326

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY   L+YGL +LSPVD +G FT EA  F GL  L  G   V++ ++E  SL+ 
Sbjct: 327 PGHGEDDYWVGLEYGLDVLSPVDSKGHFTNEAPGFEGLFYL-KGQKKVLEIIEENGSLLH 385

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQVKWVPP 571
              + H YP+DWRTKKP I+RAT QWFAS++ FR   +D +  +VKW  P
Sbjct: 386 YSEFVHSYPHDWRTKKPVIYRATPQWFASIDKFRDELLDNVEHKVKWHHP 435



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 100/159 (62%), Gaps = 1/159 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GAD++RLWV++VDY  DV +  ++L+Q+S+ YRK+R T+R++LG ++D+    +++S D 
Sbjct: 614 GADIIRLWVATVDYESDVRVSNEILKQVSESYRKIRNTIRFMLGLVNDFDPNKDAVSKDK 673

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D Y     +    ++   YE Y +  +++ +  F+  DLS FY +VAKD +Y    
Sbjct: 674 LSALDAYMFANFQTFKDDLLTDYEEYHYSSLYKRVMNFVSTDLSAFYLNVAKDIVYIDSQ 733

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
            SF RRS QTV+   L  ++ ++ PIL H  E+ W++LP
Sbjct: 734 NSFNRRSMQTVIYQVLKELLILLTPILVHTCEEAWKSLP 772


>gi|90962017|ref|YP_535933.1| isoleucyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|123391348|sp|Q1WTA9.1|SYI_LACS1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|90821211|gb|ABD99850.1| Isoleucyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 931

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 288/469 (61%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MR N  VRE E    W++++V+ +    N+G+ +FVLHDGPPYANG
Sbjct: 2   KVKDTLNLGKTKFPMRGNLPVREVERQNEWEENKVYEQRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHA+NKI KD I R K +  ++  YVPGWD HGLPIE ++ ++  +  +K L+ ++
Sbjct: 62  NIHMGHAMNKISKDFIVRSKSMMGFRAPYVPGWDTHGLPIEQQLKKAGVD--RKALSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   FKR GV  +W+NPYLTL PEYEA QI VFG+M+ +G IY+G
Sbjct: 120 FREMCRQYALEQVDKQRKDFKRLGVAGEWDNPYLTLKPEYEAQQIRVFGKMAEKGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +ALAEAE+EY +     + Y             G+L+E   +  + VWT
Sbjct: 180 KKPVFWSWSSESALAEAEVEYHDVTSPSAFYG-----EQVVDGKGVLDE---NTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + ++A   YAVV+                        D++K   ++A+D
Sbjct: 232 TTPWTIPASEGITIDATFDYAVVQHDD---------------------DERK--YVLAAD 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV      +G   + I KT+ G++LEN    HP    +  V + GD++TT++GTGLVHTA
Sbjct: 269 LVNADAELFGWNDVKIVKTVKGAELENVLCQHPFYPERKLVTMLGDFVTTDAGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D+   +KYGL +  PVDD+G  TE+ G+ F+GL    D N   +K L+E   L+
Sbjct: 329 PGFGEDDFNIGVKYGLDVYVPVDDKGYMTEDTGEDFAGL-FYEDANEVSLKKLEEAGVLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +  YEH YP+DWRTKKP IFRAT QWFASV+  R   + AI +V++ P
Sbjct: 388 KQMDYEHSYPFDWRTKKPIIFRATPQWFASVDKIRDQILGAINEVQFFP 436



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 103/167 (61%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GA+++RLWV SVD + DV +     +Q+++ YRK R T+R+LL N  D+  
Sbjct: 607 VPSEVIDKMGAEIIRLWVLSVDTSADVRVSMGSFQQIAESYRKFRNTVRFLLANTTDFDP 666

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N++++D++  ID+Y    +    K I ++Y +Y+F +I++ +  FI  DLS FY DVA
Sbjct: 667 AKNAVAFDEMESIDKYMTVLVNKFTKEILDAYANYEFMEIYKKLINFITTDLSAFYMDVA 726

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RRS QTVL   ++ + +++ PILPH  E++W+ L
Sbjct: 727 KDVVYIEAPDSKKRRSMQTVLYDVVVRLTKLMTPILPHTTEEIWKYL 773


>gi|390630016|ref|ZP_10258006.1| Isoleucyl-tRNA synthetase [Weissella confusa LBAE C39-2]
 gi|390484807|emb|CCF30354.1| Isoleucyl-tRNA synthetase [Weissella confusa LBAE C39-2]
          Length = 929

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 288/469 (61%), Gaps = 38/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MR N    E +   +W +++V+ +    N+G+ +F+LHDGPPYANG
Sbjct: 2   KMKQTLNLGKTKFPMRGNLPQTELQRENIWFENKVYEQRQKMNEGKPSFMLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHA+NKI KDII RYK +  +   +VPGWD HGLPIE ++ ++  +  +K + P  
Sbjct: 62  NIHIGHAMNKISKDIIVRYKSMNGFYAPFVPGWDTHGLPIEQQLTKAGKD--RKAVGPVI 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R  A +FA+  VK QMA FKR G+ ADW+NPYLTL PE+EAAQ+ VFG+M+ +  IYRG
Sbjct: 120 WRKMAEEFARKQVKTQMADFKRLGISADWDNPYLTLLPEFEAAQLRVFGEMAKKNLIYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +ALA AE+EY   H   S  A F          GLL+    D     WT
Sbjct: 180 KKPVFWSWSSESALAMAEIEY---HDIESNTAFFS--ERVKDGKGLLDN---DTYFIAWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWTVPA+ A+A+NA  +Y+ ++ +          ++KK               IVAS 
Sbjct: 232 TTPWTVPASQALALNADFEYSQIQPKG---------SDKK--------------YIVASA 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  +  K+G  +  +  T  G +LE     HP  +R+  +V+  DY+T ++GTG VHTA
Sbjct: 269 LLGAVAPKFGWDEYEVVATFTGKELEMVTTEHPFMDREI-LVVNADYVTADAGTGAVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D+ T  +Y +P++  VDD+GK T EAG  F G+    D +   ++ L+E  +LI
Sbjct: 328 PGFGEDDFATGQRYNMPVIMNVDDQGKMTAEAGPDFEGV-FYQDADKVALQKLEEADALI 386

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           + EP  H YP+DWRTKKP IFRA  QWFAS++ FRQ  +DA+  V + P
Sbjct: 387 LHEPVVHSYPFDWRTKKPVIFRAVPQWFASIDSFRQDILDALDDVTFQP 435



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 113/183 (61%), Gaps = 8/183 (4%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+SVD + DV +   +L Q S+ YRK+R T+R+LL N  D+    +++++DD
Sbjct: 615 GAEIIRLWVTSVDSSADVRVSMDLLSQTSETYRKIRNTMRFLLANTSDFDPKADTVAFDD 674

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L   DQY   +   +V +I+ +Y+ Y F  + +++  FI VDLS FY D AKD LY    
Sbjct: 675 LVAADQYFYARFNKLVADIKAAYDVYDFQAVNKLVINFINVDLSAFYLDFAKDILYVEAP 734

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 756
               R S QTVL   L+ + +++ PILPH AE++++ L      E+G   +F + ++ PV
Sbjct: 735 KGHARLSLQTVLYKVLVDLDKLLLPILPHTAEEIFEYLEH----EEG---DFAYLTEMPV 787

Query: 757 LDE 759
           +++
Sbjct: 788 VED 790


>gi|365903046|ref|ZP_09440869.1| isoleucyl-tRNA synthetase [Lactobacillus malefermentans KCTC 3548]
          Length = 933

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 217/527 (41%), Positives = 302/527 (57%), Gaps = 60/527 (11%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGNL 165
           K T++L KT F MR N  V+E E  K W+D+ V+      N+G+  F+LHDGPPYANG++
Sbjct: 4   KDTLNLGKTKFKMRGNLPVKEVERQKAWEDNNVYQLRQKINEGKPTFILHDGPPYANGDI 63

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           HMGHALNKI KD I RYK +  Y+  YVPGWD HGLPIE + L  +  D KK ++ ++ R
Sbjct: 64  HMGHALNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEQQ-LTKMGYDRKK-MSTTEFR 121

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
               K+A   V  Q   FKR GV  +W+NPYLTL PE+EA +I VFG+M+ +G IY+GKK
Sbjct: 122 QLCRKYALEQVDRQREEFKRLGVAGEWDNPYLTLKPEFEAQEIRVFGEMAKKGLIYKGKK 181

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PV WS SS +A+AEAE+EY +     + Y   ++V       G+L+  +    L VWTTT
Sbjct: 182 PVFWSWSSESAMAEAEVEYHDVTSPSAFYGE-KVVDG----KGILDNEV--TYLVVWTTT 234

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PA+  + V+A   Y+VV+                        D+ +   ++A++LV
Sbjct: 235 PWTIPASEGITVDANFDYSVVK-----------------------HDEDERQFVIATELV 271

Query: 406 PTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
                K+G K +   KTL GS L+     HP    +  V + G+++T E+GTGLVHTAPG
Sbjct: 272 SEAAEKFGWKDIQTVKTLKGSQLDRVLCQHPFYPERKLVTMLGNFVTLEAGTGLVHTAPG 331

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIME 523
            G +D+   +KYGL +L PVDD+G  T EAGK F G+    D N   +  L EQ  L+  
Sbjct: 332 FGMDDWQVGMKYGLDVLVPVDDKGFMTAEAGKDFEGV-FYDDANQIALDKLKEQNLLLDY 390

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVL- 582
            PYEH YP+DWRTKKP IFRAT QWFASV+  +   + AI  V++      PG+G   L 
Sbjct: 391 MPYEHSYPFDWRTKKPVIFRATPQWFASVDKIKDEILGAIDDVEFF-----PGWGKRRLY 445

Query: 583 --------------RLWVSSVDY----TGDVMIGPQVLRQMSDIYRK 611
                         R+W   +       G+ +I P+ +  ++D++ +
Sbjct: 446 NMIKDRGDWVISRQRVWGVPLPIFYGEDGEAIITPETINHVADLFEQ 492



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 102/166 (61%), Gaps = 1/166 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +     GA+++RLWVSSVD + DV +      ++SD Y+KLR TLRYLL N  D+   
Sbjct: 609 PAEVIKRMGAEIIRLWVSSVDSSADVRVSMDAFAKISDSYKKLRNTLRYLLANTSDFDPK 668

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            N+++ DDL   D++ L +L + +  +   YE + F  I++ +  F+I DLS FY D AK
Sbjct: 669 TNAVADDDLESADKFMLIKLNDFISEVEADYEKFDFLNIYKKLMNFVITDLSAFYLDFAK 728

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           D LY     S TRRS QTV    L+S+V+++ PILPH  E++W+ L
Sbjct: 729 DLLYIDSVDSQTRRSMQTVFYKVLVSLVKLLTPILPHTTEEIWEFL 774


>gi|297569151|ref|YP_003690495.1| isoleucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925066|gb|ADH85876.1| isoleucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 946

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 207/482 (42%), Positives = 274/482 (56%), Gaps = 46/482 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           Y+ T++LP+T F M+AN   REPE+ K W +  ++  +         +VLHDGPPYANG+
Sbjct: 3   YRSTLNLPQTDFPMKANLARREPEMLKKWAEEGLYENLCRATAHRPLYVLHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKDII + K +  Y   YVPGWDCHGLPIEL V + L E  K  +   + 
Sbjct: 63  LHMGHALNKILKDIILKSKRMSGYHCPYVPGWDCHGLPIELNVDKELGEQ-KAAIGKLEF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   +  Q   F+R GV   W  PYLT+D  YEAA    F    L G + R +
Sbjct: 122 REKCRRYADQWIAVQSEEFQRLGVLGHWQQPYLTIDYRYEAAIAREFNNFLLNGLVSRSR 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPST-----SGLLNEFLPDLGL 339
           KPVHW  S RTALAEAE+EY +   S SIY  F +  A           L  +  P+L L
Sbjct: 182 KPVHWCASCRTALAEAEVEYAD-QTSPSIYVKFPLQPAAAKALAEKHPNLSPDLFPNLFL 240

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN AVA++    YA VE+     G++                     +I
Sbjct: 241 VIWTTTPWTLPANVAVALHPDFTYAAVEVN----GET---------------------LI 275

Query: 400 VASDLVPTLEAKWGT-KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A +LV  + A  G  +  +  TLA +DL     +HP   R    +I  DY+T E+GTG 
Sbjct: 276 MAEELVEQVAAACGLGEYRVVTTLAAADLLGHSCLHPFMGRD-SRIIAADYVTLEAGTGC 334

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQM 518
           VHTAPGHG+EDY++ LK+ LP+LSPVDD G FT E G ++G+ +L  GN  ++  L +  
Sbjct: 335 VHTAPGHGREDYLSGLKHDLPVLSPVDDRGHFTAEGGPYAGMFIL-KGNKQIIADLQQSG 393

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWF------ASVEG----FRQAAMDAIGQVKW 568
           +L+ E+   H YP+ WR KKP IFRATEQWF      A + G     R+ A+ AI    W
Sbjct: 394 ALLGEQKISHSYPHCWRCKKPVIFRATEQWFIGMDIPAGIAGEQTTLREKALKAINNADW 453

Query: 569 VP 570
           +P
Sbjct: 454 IP 455



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 108/186 (58%), Gaps = 3/186 (1%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 611
           V+G  +    +IG V   P Q    +GA++LRLW +S DY  D+ I   +L+Q++D YRK
Sbjct: 610 VDGKGKKMSKSIGNVI-APGQIIEKHGAEILRLWAASEDYRDDIRISDNILKQLADAYRK 668

Query: 612 LRGTLRYLLGNLHDW--RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           +R T+R+LLGNLHD+      +    ++  +D++ L + E + +  R  Y+S++F +++ 
Sbjct: 669 IRNTVRFLLGNLHDFDPTAPGAPPEAEMDELDRWILARFEQLKEKTRTGYDSFEFHQVYH 728

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  V LS  Y D+ KDRLYT       RR+ Q V+      ++R++APIL  LA +
Sbjct: 729 GLYNFCTVSLSALYLDIVKDRLYTMPADHPQRRAAQAVMYEICDGLLRLLAPILSFLAAE 788

Query: 730 VWQNLP 735
            W+ LP
Sbjct: 789 AWEYLP 794


>gi|357419771|ref|YP_004932763.1| isoleucyl-tRNA synthetase [Thermovirga lienii DSM 17291]
 gi|355397237|gb|AER66666.1| Isoleucyl-tRNA synthetase [Thermovirga lienii DSM 17291]
          Length = 930

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 206/469 (43%), Positives = 280/469 (59%), Gaps = 37/469 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK+T++LP+T+F MRAN   +EPE+ + W+   ++ ++ + + + E FVLHDGPPYANGN
Sbjct: 5   YKNTLNLPQTSFPMRANLAKKEPELLRFWNSINLYEKLKESHSESERFVLHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A NKILKD I +YK ++ Y   YVPGWD HGLPIEL+VL+    D  K + P+KL
Sbjct: 65  IHIGTAFNKILKDFIPKYKWMKGYFAPYVPGWDTHGLPIELRVLKEKKIDKDK-VEPAKL 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A+  +  Q + F+R GV  DW+NPY+T   +YEAAQI VF  M  +G +Y+GK
Sbjct: 124 REYCMEYAQKYIDIQRSEFRRLGVLGDWDNPYITYKSQYEAAQIGVFADMVERGLVYKGK 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGL--AVW 342
           KPV W    +TALA AE+EY E   S SIY     V+ P      L E L D      +W
Sbjct: 184 KPVFWCIDCQTALAAAEIEY-EDESSPSIY-----VAYPFKDCEKLAEELKDRQCYTVIW 237

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PA+ AVAV+    Y+ VE                S  G V         ++A 
Sbjct: 238 TTTPWTLPASMAVAVHPDYSYSFVE----------------SEDGRVF--------LLAE 273

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +L   +E   G +      T+ G +LE  R  HP  +R+ P+V+  DY+  + GTG VHT
Sbjct: 274 ELKSAVEKDTGIRFTKTLLTVKGRELELKRLQHPFYDREVPMVL-ADYVGLDQGTGCVHT 332

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG ED+ T +KYGL +L+PVDD+G F        GL  L +G   V+  L E   L+
Sbjct: 333 APGHGIEDFETGVKYGLDVLNPVDDKGFFVANTPLVGGLS-LEEGAKKVLSVLSESGRLL 391

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +    H YP+ WR KKP IFRATEQWF SV+ FR+ A++ I +V+WVP
Sbjct: 392 GKSQITHSYPHCWRCKKPVIFRATEQWFVSVDSFREKALNEIDKVEWVP 440



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/239 (37%), Positives = 141/239 (58%), Gaps = 20/239 (8%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    ++G V  + PQE    YGAD+LRLWV+S DY  DV I   +L+ + + YR
Sbjct: 596 VDGEGRKMSKSLGNV--IAPQEIINKYGADILRLWVASTDYRNDVRISENILKNLVESYR 653

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+LLGNL+D+    +S++++    +D++ + +L+++VK + + ++ Y F     
Sbjct: 654 RIRNTARFLLGNLYDFEPAKDSVNHERPEEMDKWIISRLQSLVKRVTKGFDEYAFHLPTY 713

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
           +I  F + DLS FY DV+KDRLYT    S  RRSCQT L   L+++ +V++PIL   AE+
Sbjct: 714 MIHHFCVNDLSAFYLDVSKDRLYTEKPNSHKRRSCQTALWEILMTLTKVLSPILSFTAEE 773

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKWP-----VLDEKWRTFPVGEIYFWGKILEVIVVVT 783
           +WQ +       DGS  E VF + WP     ++DE+  +        W +ILEV   +T
Sbjct: 774 IWQEMKKI----DGSLEESVFMASWPQVHLDLVDEELES-------KWARILEVRAKIT 821


>gi|227512214|ref|ZP_03942263.1| isoleucyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227084608|gb|EEI19920.1| isoleucyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 942

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 203/469 (43%), Positives = 292/469 (62%), Gaps = 36/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E E  K W++++V+ +    N+G+ +FVLHDGPPYANG
Sbjct: 9   RVKDTLNLGKTKFKMRGNLPVKEVERQKAWEENRVYEQRQKLNEGKLSFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHA+NKI KDII RYK +  Y+  YVPGWD HGLPIE K+ Q+  +  +K ++ + 
Sbjct: 69  DIHMGHAMNKISKDIIVRYKSMTGYRAPYVPGWDTHGLPIEQKLTQAGYD--RKKMSTND 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V+ QM  FKR GV  DW++PYLTL  E+EAA++ VFG  + +G IY+G
Sbjct: 127 FRKLCQEYAMKQVQRQMDEFKRLGVSGDWDHPYLTLQHEFEAAEVRVFGAFAKRGLIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY +     + Y   +++       G+L E   +  + VWT
Sbjct: 187 KKPVYWSWSSESALAEAEVEYHDVTSPSAFYGE-KVIDG----KGVLEE--DNTFMVVWT 239

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + V+A   YAVV+ +                      D++K   ++AS+
Sbjct: 240 TTPWTIPASEGITVDADFDYAVVQPED---------------------DERK--FVIASE 276

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+   E+ +G K V I KT+ G D+E     HP D+ +  + + GD++T ++GTGLVHTA
Sbjct: 277 LLEKDESLFGWKNVKIVKTVKGRDMEGILAEHPFDHSRKLLTMLGDFVTLDAGTGLVHTA 336

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++D+    KYGL I +PVDD G  T+E+G+ F+G+    D N   +  L +   L+
Sbjct: 337 PGYGEDDFNIGRKYGLDIFAPVDDRGYLTKESGEDFAGV-FYEDANKIALDKLKKAGLLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              P  H YP+DWRTKKP IFRAT QWFASV+  +   ++AI  V + P
Sbjct: 396 DYMPLNHSYPFDWRTKKPIIFRATPQWFASVDKIKDDILNAIEDVTFYP 444



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 95/155 (61%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+SVD + DV +  +   ++SD Y+K+R T+R+LL N  D+    N++++D+
Sbjct: 624 GAEIVRLWVTSVDTSADVRVSQENFVKISDAYKKIRNTMRFLLANTSDFDPKTNAVAFDE 683

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +   DQY    L   +   R+S+E Y F   ++    F+  DLS FY D+AKD +Y    
Sbjct: 684 MESQDQYMTVLLNKFLGEARDSFEQYDFLTFYKKFLNFVTTDLSAFYLDMAKDIVYIDKK 743

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
               RRS QTV+   + ++ +++ P+LPH AE++W
Sbjct: 744 DGHKRRSMQTVMYHTVTTLTKLMTPVLPHTAEEIW 778


>gi|348520728|ref|XP_003447879.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like
           [Oreochromis niloticus]
          Length = 1014

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 211/502 (42%), Positives = 292/502 (58%), Gaps = 42/502 (8%)

Query: 78  CSSSKRRSRGPVMAAKKAAEGEKKEEGR----YKHTVDLPKTTFGMRANA---LVREPEI 130
           C+SS RR  G          G+  E G     Y+ +V LPKT F M+      L RE +I
Sbjct: 36  CTSS-RRCHG---TGSGEVNGQPAENGSSNALYRDSVLLPKTEFPMKLTGQKLLDRELQI 91

Query: 131 HKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKV 190
            +      ++    ++     F LHDGPPYANG+ H+GHALNKILKDI NR+++L+  +V
Sbjct: 92  QQECGFADLYSWQRERKAKNKFCLHDGPPYANGDPHVGHALNKILKDIRNRFEMLRGRQV 151

Query: 191 RYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWA 250
            Y+PGWDCHGLPIELK L  L       L+P ++R KA +FA+  +  Q A+F+R+GV A
Sbjct: 152 HYIPGWDCHGLPIELKALGDL---GTSGLSPLQIRQKAREFAEGAIARQKAAFQRWGVMA 208

Query: 251 DWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVS 310
           DW+  Y T D  YEAAQ++VF +M  +G IY+  KPV WSPSS TALAEAELEY   HVS
Sbjct: 209 DWDQCYYTFDGTYEAAQLKVFQEMHSKGLIYQDYKPVFWSPSSGTALAEAELEYNPEHVS 268

Query: 311 RSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQS 370
           R+IYA F +V+ PP  +    + L  + + VWTT PWT+PAN AV      QY+VV+   
Sbjct: 269 RAIYATFPLVTLPPKIAS--QKGLESVSVLVWTTQPWTIPANQAVCYMPNAQYSVVK--- 323

Query: 371 LLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENC 430
                         R  N  K       +VA++   ++ A  GT L    T  GS LE  
Sbjct: 324 --------------RVDNSEK------FLVATERTASIAALLGTDLQTVGTFTGSLLEGG 363

Query: 431 RYVHP-VDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGK 489
              HP + ++Q P ++  +++T   GTGLVHTAP HG EDY  + ++ LP+   VD++GK
Sbjct: 364 ICKHPTIPDKQVP-LLPANHVTMVKGTGLVHTAPAHGMEDYSVASQFKLPVECMVDEDGK 422

Query: 490 FTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQW 548
           F E AG +   L V+ +GN  V+  L +  +L+ EE   H YPYDWRTK+P + R ++QW
Sbjct: 423 FNELAGAELQKLSVVTEGNDKVISMLKQCNALLKEEQCVHSYPYDWRTKQPVVIRPSKQW 482

Query: 549 FASVEGFRQAAMDAIGQVKWVP 570
           F + E  +  A +A+ +V+ +P
Sbjct: 483 FINTETLKDKAKEALQKVRVLP 504



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/190 (40%), Positives = 105/190 (55%), Gaps = 9/190 (4%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH--DWRVGNSI 632
           P YGADVLR WV+  +   +V IGP VL    D   KLR TL++LLGNL   D R+  ++
Sbjct: 690 PAYGADVLRWWVAESNVFSEVQIGPSVLNSARDSISKLRNTLKFLLGNLQGFDPRL-QAV 748

Query: 633 SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLY 692
               +  IDQY L  L      + ++Y  +   ++ +++Q FI  +LS+FYF + KDRLY
Sbjct: 749 DPKQMHYIDQYMLHLLREYSIKVTDAYSEFDAGRVIRVLQAFITRELSSFYFSIIKDRLY 808

Query: 693 TGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFES 752
                S  RRSCQTVL   L  + R IAPILPH+AE+V+ + P           E +F+S
Sbjct: 809 CDAEDSLGRRSCQTVLEEILDGVTRSIAPILPHMAEEVYLHAP------GHDEGETLFKS 862

Query: 753 KWPVLDEKWR 762
            W      WR
Sbjct: 863 GWIKSSSVWR 872


>gi|448821700|ref|YP_007414862.1| Isoleucine--tRNA ligase [Lactobacillus plantarum ZJ316]
 gi|448275197|gb|AGE39716.1| Isoleucine--tRNA ligase [Lactobacillus plantarum ZJ316]
          Length = 932

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/469 (43%), Positives = 285/469 (60%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E E   +W +++V+ +    N+G+ +F+LHDGPPYANG
Sbjct: 2   RVKETLNLGKTKFKMRGNLPVKEVERQNVWAENKVYEQRQKLNEGKPSFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKI KD I RYK +  ++  YVPGWD HGLPIE K+ Q+  +  +K +T ++
Sbjct: 62  DIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHGLPIEQKLKQAGYD--RKKMTDNE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    K+A   V  Q   FKR GV  +W+NPYLTL PE+EAAQ+ VFG  + +  IYRG
Sbjct: 120 FRELCRKYALEQVDRQRDEFKRLGVAGEWDNPYLTLKPEFEAAQVRVFGAFAKRHLIYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           +KPV WS SS +ALAEAE+EY +     + Y    +        G+L++   D  + VWT
Sbjct: 180 QKPVFWSWSSESALAEAEVEYHDVTSPSAFYGEHVI-----DGKGVLDD---DTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + ++A   Y VV+           PA +  +             ++A++
Sbjct: 232 TTPWTIPASEGITIDASFDYVVVQ-----------PAGENRK------------FVLAAE 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+     ++G + V + KT+ G++LEN    HP DN +  V + GD++T +SGTGLVHTA
Sbjct: 269 LLDENAERFGWEDVQVLKTVKGAELENILCEHPFDNSRHLVTMLGDFVTLDSGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++DY    +Y LPI +PVDD+G  T EAG  F+G+    D N   +  L     L+
Sbjct: 329 PGYGEDDYRIGKQYDLPIFAPVDDKGFLTAEAGDDFAGV-FYDDANKIALDKLKAAGLLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              PYEH YP+DWRTKKP IFRAT QWFASV   R   + ++  V++ P
Sbjct: 388 KYMPYEHSYPFDWRTKKPIIFRATPQWFASVGDMRDEILKSMDDVEFFP 436



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    N ++Y+D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRFMLGNTADFDPKTNRVAYED 675

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY   +L   V   ++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMETRLNEFVAETKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S +RRS QTV    L+++ ++  P+LPH  E++W
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW 770


>gi|300768835|ref|ZP_07078729.1| isoleucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300493568|gb|EFK28742.1| isoleucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 932

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/469 (43%), Positives = 285/469 (60%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E E   +W +++V+ +    N+G+ +F+LHDGPPYANG
Sbjct: 2   RVKETLNLGKTKFKMRGNLPVKEVERQNVWAENKVYEQRQKLNEGKPSFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKI KD I RYK +  ++  YVPGWD HGLPIE K+ Q+  +  +K +T ++
Sbjct: 62  DIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHGLPIEQKLKQAGYD--RKKMTDNE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    K+A   V  Q   FKR GV  +W+NPYLTL PE+EAAQ+ VFG  + +  IYRG
Sbjct: 120 FRELCRKYALEQVDRQRDEFKRLGVAGEWDNPYLTLKPEFEAAQVRVFGAFAKRHLIYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           +KPV WS SS +ALAEAE+EY +     + Y    +        G+L++   D  + VWT
Sbjct: 180 QKPVFWSWSSESALAEAEVEYHDVTSPSAFYGEHVI-----DGKGVLDD---DTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + ++A   Y VV+           PA +  +             ++A++
Sbjct: 232 TTPWTIPASEGITIDASFDYVVVQ-----------PAGENRK------------FVLAAE 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+     ++G + V + KT+ G++LEN    HP DN +  V + GD++T +SGTGLVHTA
Sbjct: 269 LLDENAKRFGWEDVQVLKTVKGAELENILCEHPFDNSRHLVTMLGDFVTLDSGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++DY    +Y LPI +PVDD+G  T EAG  F+G+    D N   +  L     L+
Sbjct: 329 PGYGEDDYRIGKQYDLPIFAPVDDKGFLTAEAGDDFAGV-FYDDANKIALDKLKAAGLLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              PYEH YP+DWRTKKP IFRAT QWFASV   R   + ++  V++ P
Sbjct: 388 KYMPYEHSYPFDWRTKKPIIFRATPQWFASVGDMRDEILKSMDDVEFFP 436



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    N ++Y+D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRFMLGNTADFDPKTNRVAYED 675

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY   +L   V   ++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMETRLNEFVAETKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S +RRS QTV    L+++ ++  P+LPH  E++W
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW 770


>gi|227524054|ref|ZP_03954103.1| isoleucyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088793|gb|EEI24105.1| isoleucyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 942

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 203/469 (43%), Positives = 289/469 (61%), Gaps = 36/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E E  K W++++V+ +    N+G+ +FVLHDGPPYANG
Sbjct: 9   RVKDTLNLGKTKFKMRGNLPVKEVERQKAWEENRVYEQRQKLNEGKPSFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHA+NKI KDII RYK +  Y+  YVPGWD HGLPIE K+ Q+  +  +K ++ + 
Sbjct: 69  DIHMGHAMNKISKDIIVRYKSMTGYRAPYVPGWDTHGLPIEQKLTQAGYD--RKKMSTND 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V+ QM  FKR GV  DW++PYLTL  E+EAA++ VFG  + +G IY+G
Sbjct: 127 FRKLCQEYAMKQVQRQMDEFKRLGVSGDWDHPYLTLQHEFEAAEVRVFGAFAKRGLIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY +     + Y             G+L E   +  + VWT
Sbjct: 187 KKPVYWSWSSESALAEAEVEYHDVTSPSAFYG-----EKVTDGKGVLEE--DNTFMVVWT 239

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + V+A   YAVV+ +                      D++K   ++AS+
Sbjct: 240 TTPWTIPASEGITVDADFDYAVVQPED---------------------DERK--FVIASE 276

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+   E+ +G K V I KT+ G D+E     HP D+ +  + + GD++T ++GTGLVHTA
Sbjct: 277 LLEKDESLFGWKNVKIVKTVKGRDMEGILAEHPFDHSRKLLTMLGDFVTLDAGTGLVHTA 336

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++D+    KYGL I +PVDD G  T+E+G+ F+G+    D N   +  L +   L+
Sbjct: 337 PGYGEDDFNIGRKYGLDIFAPVDDRGYLTKESGEDFAGV-FYEDANKIALDKLKKAGLLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              P  H YP+DWRTKKP IFRAT QWFASV+  +   ++AI  V + P
Sbjct: 396 DYMPLNHSYPFDWRTKKPIIFRATPQWFASVDKIKDDILNAIEDVTFYP 444



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 95/155 (61%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+SVD + DV +  +   ++SD Y+K+R T+R+LL N  D+    N++++D+
Sbjct: 624 GAEIVRLWVTSVDTSADVRVSQENFVKISDAYKKIRNTMRFLLANTSDFDPKTNAVAFDE 683

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +   DQY    L   +   R+S+E Y F   ++    F+  DLS FY D+AKD +Y    
Sbjct: 684 MESQDQYMTVLLNKFLGEARDSFEQYDFLTFYKKFLNFVTTDLSAFYLDMAKDIVYIDKK 743

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
               RRS QTV+   + ++ +++ P+LPH AE++W
Sbjct: 744 DGHKRRSMQTVMYHTVTTLTKLMTPVLPHTAEEIW 778


>gi|418275726|ref|ZP_12891049.1| isoleucine-tRNA synthetase [Lactobacillus plantarum subsp.
           plantarum NC8]
 gi|376009277|gb|EHS82606.1| isoleucine-tRNA synthetase [Lactobacillus plantarum subsp.
           plantarum NC8]
          Length = 932

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/469 (43%), Positives = 285/469 (60%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E E   +W +++V+ +    N+G+ +F+LHDGPPYANG
Sbjct: 2   RVKETLNLGKTKFKMRGNLPVKEVERQNVWAENKVYEQRQKLNEGKPSFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKI KD I RYK +  ++  YVPGWD HGLPIE K+ Q+  +  +K +T ++
Sbjct: 62  DIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHGLPIEQKLKQAGYD--RKKMTDNE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    K+A   V  Q   FKR GV  +W+NPYLTL PE+EAAQ+ VFG  + +  IYRG
Sbjct: 120 FRELCRKYALEQVDRQRDEFKRLGVAGEWDNPYLTLKPEFEAAQVRVFGAFAKRHLIYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           +KPV WS SS +ALAEAE+EY +     + Y    +        G+L++   D  + VWT
Sbjct: 180 QKPVFWSWSSESALAEAEVEYHDVTSPSAFYGEHVI-----DGKGVLDD---DTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + ++A   Y VV+           PA +  +             ++A++
Sbjct: 232 TTPWTIPASEGITIDASFDYVVVQ-----------PAGENRK------------FVLAAE 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+     ++G + V + KT+ G++LEN    HP DN +  V + GD++T +SGTGLVHTA
Sbjct: 269 LLDENAERFGWEDVQVLKTVKGAELENILCEHPFDNSRHLVTMLGDFVTLDSGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++DY    +Y LPI +PVDD+G  T EAG  F+G+    D N   +  L     L+
Sbjct: 329 PGYGEDDYRIGKQYDLPIFAPVDDKGFLTAEAGDDFAGV-FYDDANKIALDKLKAAGLLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              PYEH YP+DWRTKKP IFRAT QWFASV   R   + ++  V++ P
Sbjct: 388 KYMPYEHSYPFDWRTKKPIIFRATPQWFASVGDMRDEILKSMDDVEFFP 436



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    N ++Y+D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRFMLGNTADFDPKTNRVAYED 675

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY   +L   V   ++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMETRLNEFVAETKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S +RRS QTV    L+++ ++  P+LPH  E++W
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW 770


>gi|380032930|ref|YP_004889921.1| isoleucine-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|81631129|sp|Q88V89.1|SYI_LACPL RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|342242173|emb|CCC79407.1| isoleucine-tRNA synthetase [Lactobacillus plantarum WCFS1]
          Length = 932

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/469 (43%), Positives = 285/469 (60%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E E   +W +++V+ +    N+G+ +F+LHDGPPYANG
Sbjct: 2   RVKETLNLGKTKFKMRGNLPVKEVERQNVWAENKVYEQRQKLNEGKPSFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKI KD I RYK +  ++  YVPGWD HGLPIE K+ Q+  +  +K +T ++
Sbjct: 62  DIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHGLPIEQKLKQAGYD--RKKMTDNE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    K+A   V  Q   FKR GV  +W+NPYLTL PE+EAAQ+ VFG  + +  IYRG
Sbjct: 120 FRELCRKYALEQVDRQRDEFKRLGVAGEWDNPYLTLKPEFEAAQVRVFGAFAKRHLIYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           +KPV WS SS +ALAEAE+EY +     + Y    +        G+L++   D  + VWT
Sbjct: 180 QKPVFWSWSSESALAEAEVEYHDVTSPSAFYGEHVI-----DGKGVLDD---DTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + ++A   Y VV+           PA +  +             ++A++
Sbjct: 232 TTPWTIPASEGITIDASFDYVVVQ-----------PAGENRK------------FVLAAE 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+     ++G + V + KT+ G++LEN    HP DN +  V + GD++T +SGTGLVHTA
Sbjct: 269 LLDENAERFGWEDVQVLKTVKGAELENILCEHPFDNSRHLVTMLGDFVTLDSGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++DY    +Y LPI +PVDD+G  T EAG  F+G+    D N   +  L     L+
Sbjct: 329 PGYGEDDYRIGKQYDLPIFAPVDDKGFLTAEAGDDFAGV-FYDDANKIALDKLKAAGLLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              PYEH YP+DWRTKKP IFRAT QWFASV   R   + ++  V++ P
Sbjct: 388 KYMPYEHSYPFDWRTKKPIIFRATPQWFASVGDMRDEILKSMDDVEFFP 436



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    N ++Y+D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRFMLGNTADFDPKANRVAYED 675

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY   +L   V   ++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMETRLNEFVAETKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S +RRS QTV    L+++ ++  P+LPH  E++W
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW 770


>gi|308180989|ref|YP_003925117.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308046480|gb|ADN99023.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 932

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/469 (43%), Positives = 285/469 (60%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E E   +W +++V+ +    N+G+ +F+LHDGPPYANG
Sbjct: 2   RVKETLNLGKTKFKMRGNLPVKEVERQNVWAENKVYEQRQKLNEGKPSFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKI KD I RYK +  ++  YVPGWD HGLPIE K+ Q+  +  +K +T ++
Sbjct: 62  DIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHGLPIEQKLKQAGYD--RKKMTDNE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    K+A   V  Q   FKR GV  +W+NPYLTL PE+EAAQ+ VFG  + +  IYRG
Sbjct: 120 FRELCRKYALEQVDRQRDEFKRLGVAGEWDNPYLTLKPEFEAAQVRVFGAFAKRHLIYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           +KPV WS SS +ALAEAE+EY +     + Y    +        G+L++   D  + VWT
Sbjct: 180 QKPVFWSWSSESALAEAEVEYHDVTSPSAFYGEHVI-----DGKGVLDD---DTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + ++A   Y VV+           PA +  +             ++A++
Sbjct: 232 TTPWTIPASEGITIDASFDYVVVQ-----------PAGENRK------------FVLAAE 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+     ++G + V + KT+ G++LEN    HP DN +  V + GD++T +SGTGLVHTA
Sbjct: 269 LLDENAERFGWEDVQVLKTVKGAELENILCEHPFDNSRHLVTMLGDFVTLDSGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++DY    +Y LPI +PVDD+G  T EAG  F+G+    D N   +  L     L+
Sbjct: 329 PGYGEDDYRIGKQYDLPIFAPVDDKGFLTAEAGDDFAGV-FYDDANKIALDKLKAAGLLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              PYEH YP+DWRTKKP IFRAT QWFASV   R   + ++  V++ P
Sbjct: 388 KYMPYEHSYPFDWRTKKPIIFRATPQWFASVGDMRDEILKSMDDVEFFP 436



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    N ++Y+D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRFMLGNTADFDPKANRVAYED 675

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY   +L   V   ++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMETRLNEFVAETKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S +RRS QTV    L+++ ++  P+LPH  E++W
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW 770


>gi|26335861|dbj|BAC31631.1| unnamed protein product [Mus musculus]
          Length = 560

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/471 (42%), Positives = 279/471 (59%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+T+F M+     +   E EI +     Q++    ++     F LHDGPPY
Sbjct: 58  GRYRDTVLLPQTSFPMKLLGRQQSDMELEIQQKCGFSQLYSCQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ +++  KV +VPGWDCHGLPIE KVL  L  DA+  L+
Sbjct: 118 ANGDPHVGHALNKILKDIANRFHMMRGSKVHFVPGWDCHGLPIETKVLSELGVDAQ-SLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FA+A ++ Q ++F R+GV ADWNN Y T DP+YEA Q+ VF QM  +G +
Sbjct: 177 AMEIREKARSFAQAAIEKQKSAFVRWGVMADWNNCYYTFDPKYEAKQLRVFYQMYEKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV+WSPSSRTALAEAELEY   HVSRSIY  F ++  PP    L +   P + + 
Sbjct: 237 YRSYKPVYWSPSSRTALAEAELEYNPEHVSRSIYVRFPLLRPPPKLESLTDASSP-VSVL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN A+    + +YAVV               K S  G++         I+
Sbjct: 296 VWTTQPWTIPANQAICYMPEAKYAVV---------------KCSASGHLY--------IL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A D +  + +   T   +    +G DLE     HP+   +   ++   ++T   GTGLVH
Sbjct: 333 AEDKIAPVASALETTFDVVAAFSGVDLEGGTCSHPLTPDKVSPLLPATHVTMAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD+ G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYSVASQHSLPMDCLVDEGGMFTDAAGPELQNKAVLKEGTDVVIKMLQATKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++ EE   H YP DWRTK P + RA++QWF ++   + AA +++  VK++P
Sbjct: 453 VLKEENIVHSYPCDWRTKTPVLIRASKQWFVNITDIKAAAKESLKTVKFIP 503


>gi|91202863|emb|CAJ72502.1| strongly similar to isoleucine tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 938

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 199/474 (41%), Positives = 276/474 (58%), Gaps = 39/474 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRV-ADKNDGENFVLHDGPPYANGN 164
           YK T++LP T F M+AN L +EP I K W+   ++ ++ A + + + ++LHDGPPY  G 
Sbjct: 3   YKKTLNLPATKFSMKANLLEKEPLIQKKWEKDVLYEQIRAARTNKKKYILHDGPPYPTGE 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+G  LNKILKD I R+  ++ Y   YVPGWDCHGLPIE +V+Q +  + K  LT +++
Sbjct: 63  LHIGTGLNKILKDFIVRFFTMEGYDAPYVPGWDCHGLPIEHRVMQEVGSEVKH-LTKTEI 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  K+A+  V  Q   FK  GV  DW +PYLT  P YEA  IEVF ++   GY+YR +
Sbjct: 122 RKKCKKYAEKFVTIQKKQFKALGVLGDWEHPYLTFTPAYEAGVIEVFAKLVENGYVYRSR 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-----L 339
           KP+HW     TALAEAELEY +   S S+Y  F++          L  F PD G     L
Sbjct: 182 KPIHWCTRCATALAEAELEYHDK-TSPSVYVHFKI-------KDTLKNFFPDDGNEGVSL 233

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN A+A++    Y  +               +   P    K  KK   +
Sbjct: 234 MIWTTTPWTLPANLAIALHPGYDYTAI---------------RYFHP----KTNKKEVSL 274

Query: 400 VASDLVPTLEAKWGTKLVIK-KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A   +  +    G K   K  T+ G +LE  +Y H   +R   VV+  DY+T   GTG 
Sbjct: 275 LADGRIDEVLQSLGIKDFKKLGTVKGIELEGVKYQHAFMDRTGFVVM-ADYVTLSDGTGC 333

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQM 518
           VH APGHGQED++T +KY LP+LSPV+ EG FT EAG+F+G +++ +GN +++  LD   
Sbjct: 334 VHIAPGHGQEDFITGIKYHLPVLSPVNAEGVFTGEAGEFAGQNII-EGNTSIINKLDAVG 392

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           +L+ +    H YP+ WR K P IFRATEQWF +++    R   +  I  VKW+P
Sbjct: 393 ALLQKTNITHSYPHCWRCKNPVIFRATEQWFVNLDHNNLRSTVLKEIKNVKWIP 446



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 72/161 (44%), Positives = 108/161 (67%), Gaps = 1/161 (0%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           +GAD+LRLW SS+DY  D+ +   ++ + SD YR++R T RYLL NL+D+    N+I +D
Sbjct: 626 FGADILRLWTSSMDYQHDMGVSRNLINRCSDAYRRIRNTFRYLLSNLYDFNPHENAIPHD 685

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
            L  ID++A+ + + ++K I  +YE+ QF K+F  I  F  V++S+FY D+ KDRLYT  
Sbjct: 686 ALLEIDRWAIHKTQELIKQITVNYETLQFHKVFHSIHNFCAVEMSSFYLDILKDRLYTFA 745

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
             S  RR+ QT L   LL++V++ API+ H AE+VW N+ F
Sbjct: 746 KDSRERRAAQTALHTILLTLVKLSAPIIVHTAEEVWSNIEF 786


>gi|345797961|ref|XP_536121.3| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial, partial [Canis
           lupus familiaris]
          Length = 963

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/476 (42%), Positives = 279/476 (58%), Gaps = 29/476 (6%)

Query: 99  EKKEEGRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLH 155
           +    GRY+ TV LP+T+F M+     +   E EI +     +++    ++     F LH
Sbjct: 4   QSSSNGRYRDTVLLPQTSFPMKLLGRQQPDTELEIQQKCGFSELYSWQRERKVKTEFCLH 63

Query: 156 DGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA 215
           DGPPYANG+ H+GHALNKILKDI NRY +++  KV +VPGWDCHGLPIE+KVL  L   A
Sbjct: 64  DGPPYANGDPHVGHALNKILKDIANRYHMMRGSKVHFVPGWDCHGLPIEIKVLSELGGKA 123

Query: 216 KKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMS 275
           + +L+  ++R KA  FA+A +K Q ++F R+GV ADWNN Y T D +YEA Q+ +F QM 
Sbjct: 124 Q-NLSAVEIRKKARSFAEAAIKKQRSAFIRWGVMADWNNCYYTFDGKYEAKQLRIFYQMY 182

Query: 276 LQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP 335
            +G +YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P    L++   P
Sbjct: 183 EKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLVSLIDGSSP 242

Query: 336 DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
            +   VWTT  WT+PAN AV      +YA+V+  +   GD                    
Sbjct: 243 -VSFLVWTTQAWTIPANQAVCYMPDSKYAIVKCST--SGD-------------------- 279

Query: 396 VFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESG 455
              ++A+D V ++ +   T   +  T +G+DLE     HP+   +   ++   ++T   G
Sbjct: 280 -LYVLAADKVTSVASALETTFEVISTFSGADLEGGTCAHPLIPDKASPLLPASHVTMTKG 338

Query: 456 TGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYL 514
           TGLVHTAP HG EDY  + ++ LP    VD++G FT+ AG K     VL +G   V+K L
Sbjct: 339 TGLVHTAPAHGMEDYSVASQHNLPTDCLVDEDGVFTDVAGPKLQNKAVLEEGTDVVIKML 398

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                L+ EE   H YPYDWRTKKP + RA++QWF ++   +  A + + +VK++P
Sbjct: 399 QAAKHLLKEERLVHSYPYDWRTKKPVVIRASKQWFVNITDIKATAKELLKKVKFIP 454



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 112/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V I P VL    D   KLR TLR+LLGN+  +    +SI 
Sbjct: 640 PPYGADVLRWWVAESNVFTEVTISPSVLNAARDDISKLRNTLRFLLGNVAGFNPETDSIP 699

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +++ +IDQY L  L+++   I +SY+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 700 VNNMHVIDQYMLHLLQDLANKITDSYKQYDFGKVVRLLRAFYTRELSNFYFSIIKDRLYC 759

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L+  L  +VR  APILPHLAE+V+Q++P+A         + VF + 
Sbjct: 760 EKAGDPKRRSCQTALAEILDVMVRSFAPILPHLAEEVFQHVPYA------KEPKSVFRTG 813

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 814 WIRTSSIWK 822


>gi|410925971|ref|XP_003976452.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial-like [Takifugu
           rubripes]
          Length = 1001

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 203/469 (43%), Positives = 282/469 (60%), Gaps = 32/469 (6%)

Query: 106 YKHTVDLPKTTFGMRANA---LVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYAN 162
           Y+ TV LP+T F M+      L +E +I K      ++     +   + F +HDGPPYAN
Sbjct: 51  YRDTVLLPRTDFPMKVTGQKLLDQEVDIQKKCGFADLYAWQRKRKAKKEFCVHDGPPYAN 110

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G+ H+GHALNKILKDI NR+++L+  +V YVPGWDCHGLPIELK   +L E     LTP 
Sbjct: 111 GDPHVGHALNKILKDIRNRFEMLRGRRVHYVPGWDCHGLPIELK---ALGEIKTSSLTPL 167

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           ++R KA  FA+  +  Q A+F+R+GV ADW+N Y T    YEAAQ++VF +M  +G+IY+
Sbjct: 168 QIRQKARAFAEEAIARQKAAFQRWGVMADWDNCYYTHHGVYEAAQLQVFQEMHSKGFIYQ 227

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
             KPV WSPSSRTALAEAELEY   HVSR+IYA F + +APP+    ++  L  + + VW
Sbjct: 228 DHKPVFWSPSSRTALAEAELEYNAHHVSRAIYATFPLTTAPPNIGSDVD--LDGVSVLVW 285

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TT PWT+PAN AV    K QY+VV+       DSA               QK   +++A+
Sbjct: 286 TTQPWTIPANQAVCYMPKAQYSVVK-----RADSA---------------QK---LLLAT 322

Query: 403 DLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           +   +L +  GT+L    TL GS LE     HP+       ++  +++T   GTGLVHTA
Sbjct: 323 ERTASLSSLLGTELETVGTLTGSQLEGGICRHPLVPDSFVPLLPANHVTMVKGTGLVHTA 382

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           P HG +DY  +  + L +   VD++G+FTE AG +   L V+ +G   V+  L +  +L+
Sbjct: 383 PAHGMDDYSVASNFNLSVECLVDEDGRFTELAGAELQDLAVMSEGTDKVISMLRDCGALV 442

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            EEP  H YPYDWRTK+P I R + QWF +    +  A +A+ +V  +P
Sbjct: 443 KEEPCVHSYPYDWRTKQPVIIRPSRQWFINTASLKDKAKEALQKVHILP 491



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 102/181 (56%), Gaps = 7/181 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSIS 633
           P YGADVLR W +  +   ++ IG  VL    D   KLR +LR+LLGNLH +     +++
Sbjct: 677 PPYGADVLRWWAAESNMFSEIHIGANVLNSARDSINKLRNSLRFLLGNLHGFNPQVQAVA 736

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
             D+  IDQY L  L      + ++Y  +   ++ +++Q FI  DLS+FYF + KDRLY 
Sbjct: 737 PADMHYIDQYMLHLLHKYSIKVTDAYSEFDAGRVIRVLQAFITSDLSSFYFSIIKDRLYC 796

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
               S  RRSCQTVL   L  + R +AP+LPHLAE+V+ + P          A+ +F S 
Sbjct: 797 DPDDSLGRRSCQTVLEKVLDGVTRSMAPVLPHLAEEVYLHSP------GHEEAQSLFRSG 850

Query: 754 W 754
           W
Sbjct: 851 W 851


>gi|183221665|ref|YP_001839661.1| isoleucyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911741|ref|YP_001963296.1| isoleucyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|254782416|sp|B0SBW4.1|SYI_LEPBA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|254782417|sp|B0STE5.1|SYI_LEPBP RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|167776417|gb|ABZ94718.1| Isoleucine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780087|gb|ABZ98385.1| Isoleucyl-tRNA synthetase (Isoleucine--tRNA ligase; IleRS)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 915

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/471 (42%), Positives = 283/471 (60%), Gaps = 43/471 (9%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVAD-KNDGENFVLHDGPPYA 161
           E  Y  TV LP+T+F M+A+   REP   K+W D +VFL + + +    +FVLHDGPPYA
Sbjct: 7   ENPYSKTVLLPETSFPMKADLAKREPGQIKVWKDQKVFLNMKEIRKSKPSFVLHDGPPYA 66

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGN H+GH+LNKILKDII + K L  Y+   +PGWDCHGLPIE++VL++L ++A ++  P
Sbjct: 67  NGNFHVGHSLNKILKDIIIKSKTLSGYQTDMIPGWDCHGLPIEVQVLKNLGKEA-RNTGP 125

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           S+LR K  ++A   V  Q     R+  + D NN YLT+ PE+EA  +EVFG +  +GYIY
Sbjct: 126 SELRKKCREYAAEFVGKQGEDLNRFLCFWDENNKYLTMAPEFEARIVEVFGSLFAKGYIY 185

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +GKKPV+W     TA AEAE+EY + HVS SIY  F +                D    +
Sbjct: 186 KGKKPVYWCIDLATAHAEAEIEY-QNHVSPSIYVKFAVKGE------------TDTHCLI 232

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN A+  N +L Y      SL + D+                     +I+A
Sbjct: 233 WTTTPWTLPANLAICFNEELPY------SLFQSDAHGR------------------LILA 268

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
             L   +E K G  L   K+L+ +DL+   ++HP  +R+  + + G+++T ++GTG VHT
Sbjct: 269 DGLKEAVEQKTGITLTKIKSLSNADLKQMVFLHPFLDRES-IPLFGNHVTLDAGTGCVHT 327

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG +DY      GLP LSPVDD G++T+E     G+ +  D N  +V+ L E+ +L+
Sbjct: 328 APGHGTDDYRVGTAAGLPTLSPVDDYGRYTDEFEMMKGIKIW-DANPKIVELLREKNALV 386

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
               + H YP+ WR+KKP IFRAT QWF S++  G R  ++ AI +V+W+P
Sbjct: 387 HFSEFTHSYPHSWRSKKPLIFRATPQWFFSIDHNGLRDESLKAIDKVQWIP 437



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 98/158 (62%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 636
           YGAD+LRLWVS+ D+  DV IG   ++ +S+ YRK+R T RYLLGN     +  ++  ++
Sbjct: 617 YGADILRLWVSTQDFRDDVKIGKDSIKTVSEAYRKIRNTFRYLLGNTSAETLTWNLKKEE 676

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  ID+Y L +L  +   +++ Y++YQF +++  I  F  VDLS  YF++ +DR+Y    
Sbjct: 677 LDTIDKYYLHKLAKLNDEVKKLYDTYQFHQVYHKILGFCTVDLSQDYFEIIRDRMYCDAK 736

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S TRRS +  L+  L  + +++APIL    E+VW + 
Sbjct: 737 ESKTRRSSEYTLAVILEVLSKLLAPILSFTTEEVWTSF 774


>gi|194468388|ref|ZP_03074374.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194453241|gb|EDX42139.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 950

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 209/469 (44%), Positives = 290/469 (61%), Gaps = 38/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L +T F MR    V E +  +LW++++V+      N+G+  FVLHDGPPYANG
Sbjct: 21  RVKDTLNLGRTKFPMRGKLPVTEAQREQLWEENKVYELRQKLNEGKPTFVLHDGPPYANG 80

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHA+NKI KD I RYK +  Y+  YVPGWD HGLPIE ++ +S  +  K  LT  +
Sbjct: 81  NIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQLTKSGYDRKKMSLT--E 138

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ 
Sbjct: 139 FRDLCREYALKQVDKQRTDFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQA 198

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY +  V+++ + V ++        G L+    D  L VWT
Sbjct: 199 KKPVYWSWSSESALAEAEVEYHDV-VAKTAFFVEQIKDG----KGRLDN---DTYLVVWT 250

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWTVPA+ AVAVN K  Y+VV+           PAN          D +K   +VA+D
Sbjct: 251 TTPWTVPASEAVAVNPKFDYSVVK-----------PAN----------DDRK--FVVATD 287

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  L  K G     +   L G +LE     HP  +R   V +  DY+T ++GTGLVHTA
Sbjct: 288 LLEKLAEKLGWEDYEVVDHLMGQELEGMTTQHPYLDRDLLVGL-ADYVTADAGTGLVHTA 346

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G EDY    KY LPI +P++D+G  T+E G  F G+    D +   ++ L+E  +L+
Sbjct: 347 PGYGDEDYNFGKKYDLPIFAPINDQGVLTKENGDGFEGV-FYQDADDVSLQKLEENNALL 405

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++EP +H YP+DWRTK+P IFRAT+QWF S+E  RQ  +DA+  VK+ P
Sbjct: 406 LQEPLQHSYPFDWRTKQPIIFRATDQWFVSIEKMRQNILDALEDVKYHP 454



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D+    N++SY+ 
Sbjct: 634 GAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYEK 693

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L + +K +RE +++Y F   ++++  F+  DLS FY ++AKD LY    
Sbjct: 694 LQSVDKYMLVKLNHFLKTMREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAE 753

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S  RRS QTV    LL++V+++ PILPH  E+VW
Sbjct: 754 NSEVRRSMQTVFYDILLTLVKLLTPILPHTTEEVW 788


>gi|452851098|ref|YP_007492782.1| Isoleucyl-tRNA synthetase [Desulfovibrio piezophilus]
 gi|451894752|emb|CCH47631.1| Isoleucyl-tRNA synthetase [Desulfovibrio piezophilus]
          Length = 938

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 206/470 (43%), Positives = 279/470 (59%), Gaps = 36/470 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLR-VADKNDGENFVLHDGPPYANGN 164
           YK T+ LPKT F M+AN   REPE+ K W+D + + + VA  +  + +VLHDGPPYANG+
Sbjct: 4   YKKTLLLPKTQFPMKANLKQREPEMLKFWEDTEAYEKMVAASDSKKEYVLHDGPPYANGH 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMG ALNK+LKDI+ + + +Q  + +YVPGWDCHGLPIE KV Q L +   K+L    +
Sbjct: 64  IHMGTALNKVLKDIVIKSRNIQGQQAQYVPGWDCHGLPIEHKVEQEL-KKKNKELDTLTI 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A   +  Q   FKR GV   W  PY+T++PEYEAA     G+   +  + RGK
Sbjct: 123 RKICRSYAAKWLDTQRKEFKRLGVLGVWETPYMTMNPEYEAATARELGKFMERDGVVRGK 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KP++W    RTALAEAE+EY E H S SIY  F +  A  +   L N  +  L +A+WTT
Sbjct: 183 KPIYWCCDCRTALAEAEVEY-EDHTSPSIYVRFPL--ADENAQKLGNIDISRLYIAIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P N  VAV+    YA+V+                             F I+A  L
Sbjct: 240 TPWTIPDNMGVAVHPDFDYAIVK-------------------------SNNDFYILAEGL 274

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           +    AK+G     I KT+ G++LE  +  HP+ NR  P+V+  DY+T E+GTG VHTAP
Sbjct: 275 LEECSAKFGWESPEIIKTIRGAELEGLQAKHPIYNRPSPIVL-ADYVTLETGTGCVHTAP 333

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED+ T LKY L + SP++D G+F  E   FSGL+V  + N AV+K L +  +L+  
Sbjct: 334 GHGREDFETGLKYRLEVYSPMNDRGEFLPEVEFFSGLNVW-EANPAVIKKLTDIGNLLAS 392

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 570
           E   H YP+ WR KKP IFRAT QWF  ++    R  ++DAI  +V W+P
Sbjct: 393 EDISHSYPHCWRCKKPVIFRATTQWFVGMDENSLRDRSLDAIRNKVDWIP 442



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 109/174 (62%), Gaps = 3/174 (1%)

Query: 562 AIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 620
           +IG V  + PQE    YGA++LR+WVS+ +Y  D+ I  + L ++ D YR++R T RYLL
Sbjct: 610 SIGNV--IAPQEIIDKYGAEILRMWVSASNYQEDIRISDETLNRLVDAYRRIRNTCRYLL 667

Query: 621 GNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
            NL+D+     ++ +DL  +D+YAL  +      I+ +Y+S++F K++  +    +VDLS
Sbjct: 668 SNLNDFDPQKKVAANDLLPLDKYALDMVSRHHAEIQNAYKSFEFHKVYHTLHNLCVVDLS 727

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            FY D+ KDRLY    +   RRS QTVL   LL +++ +APIL   AE+ +Q++
Sbjct: 728 AFYLDIIKDRLYVEEESGLKRRSAQTVLWQILLMLLQDMAPILSFTAEEAFQSM 781


>gi|26341092|dbj|BAC34208.1| unnamed protein product [Mus musculus]
          Length = 1012

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/471 (42%), Positives = 279/471 (59%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+T+F M+     +   E EI +     +++    ++     F LHDGPPY
Sbjct: 58  GRYRDTVLLPQTSFPMKLLGRQQSDMELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ +++  KV +VPGWDCHGLPIE KVL  L  DA+  L+
Sbjct: 118 ANGDPHVGHALNKILKDIANRFHMMRGSKVHFVPGWDCHGLPIETKVLSELGVDAQ-SLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FA+A ++ Q ++F R+GV ADWNN Y T DP+YEA Q+ VF QM  +G +
Sbjct: 177 AMEIREKARSFAQAAIEKQKSAFVRWGVMADWNNCYYTFDPKYEAKQLRVFYQMYEKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV+WSPSSRTALAEAELEY   HVSRSIY  F ++  PP    L +   P + + 
Sbjct: 237 YRSYKPVYWSPSSRTALAEAELEYNPEHVSRSIYVRFPLLRPPPKLESLTDASSP-VSVL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN A+    + +YAVV               K S  G++         I+
Sbjct: 296 VWTTQPWTIPANQAICYMPEAKYAVV---------------KCSASGHLY--------IL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A D +  + +   T   +    +G DLE     HP+   +   ++   ++T   GTGLVH
Sbjct: 333 AEDKIAPVASALETTFDVVAAFSGVDLEGGTCSHPLTPDKVSPLLPATHVTMAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD+ G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYSVASQHSLPMDCLVDEGGMFTDAAGPELQNKAVLKEGTDVVIKMLQATKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++ EE   H YP DWRTK P + RA++QWF ++   + AA +++  VK++P
Sbjct: 453 VLKEENIVHSYPCDWRTKTPVLIRASKQWFVNITDIKAAAKESLKTVKFIP 503



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/189 (39%), Positives = 111/189 (58%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGAD+LR W++  +   ++ IGP VL    D   KLR TLR+LLGNL  +    +S+ 
Sbjct: 689 PPYGADILRWWIAESNVFTEMTIGPSVLSAARDDISKLRNTLRFLLGNLTGFNPETDSVP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
             ++ +IDQY L  +++    I +SY+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 749 VKNMYVIDQYMLHLIQDFATKITDSYKQYDFGKVVRLLKAFYTRELSSFYFSIVKDRLYC 808

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L+  L  +VR  APILPHLAE+V+Q++P+       +  + VF + 
Sbjct: 809 ENEKDPKRRSCQTALAEILDVLVRAFAPILPHLAEEVFQHIPYV------TEPKSVFRTG 862

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 863 WINTSSIWK 871


>gi|194227336|ref|XP_001488103.2| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial [Equus
           caballus]
          Length = 1012

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/476 (42%), Positives = 285/476 (59%), Gaps = 29/476 (6%)

Query: 99  EKKEEGRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLH 155
           +   +GRY+ TV LP+T+F M+     +   E EI +     +++    ++     F LH
Sbjct: 53  QNSTDGRYRDTVLLPQTSFPMKLLGRQQPDTELEIQQKCGFSELYSWQRERKVKTEFCLH 112

Query: 156 DGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA 215
           DGPPYANG+ H+GHALNKILKDI NR+ +++  K+ +VPGWDCHGLPIELKVL  L   A
Sbjct: 113 DGPPYANGDPHVGHALNKILKDIANRFHMMRGSKIHFVPGWDCHGLPIELKVLSELGGKA 172

Query: 216 KKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMS 275
           + +L+  ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D  YEA Q+ +F QM 
Sbjct: 173 Q-NLSAVEIREKARSFAKAAIEKQKSAFIRWGIMADWNNCYCTFDGSYEARQLRIFYQMY 231

Query: 276 LQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP 335
            +G IYR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++   P
Sbjct: 232 DKGLIYRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGS-P 290

Query: 336 DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
            +   VWTT PWT+PAN AV    + +YA+V               K S+ G++      
Sbjct: 291 PVSFLVWTTQPWTIPANQAVCYMPESKYALV---------------KCSKSGDLY----- 330

Query: 396 VFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESG 455
              I+A+D V ++ +   T   +  T +G DLE+    HP+   +   ++  +++T   G
Sbjct: 331 ---ILAADKVTSVASVLETTFEVISTFSGVDLESGTCTHPLIPEKVSPLLPANHVTMTKG 387

Query: 456 TGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYL 514
           TGLVHTAP HG EDY  + ++ L     VD++G FT+ AG +     VL +G   V+K L
Sbjct: 388 TGLVHTAPAHGMEDYSVASQHNLSTDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKML 447

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               +L+ EE   H YPYDWRTKKP + RA++QWF ++   +  A + + +VK++P
Sbjct: 448 QAAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNLTDVKTTAKELLKKVKFIP 503



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/189 (42%), Positives = 113/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+  +    +SI 
Sbjct: 689 PPYGADVLRWWVAESNVFTEVTIGPSVLNAARDDISKLRNTLRFLLGNVTGFNPETDSIP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +++ +IDQY L  L+++   I +SY+ Y F K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 749 VNNMYVIDQYMLHLLQDLANKITDSYKQYDFGKVIRLLQAFYTRELSNFYFSIIKDRLYC 808

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L+  L  +VR  APILPHLAE+V+Q++P++         + VF + 
Sbjct: 809 ENAEDPKRRSCQTALAQILDVMVRSFAPILPHLAEEVFQHIPYS------KEPKSVFRTG 862

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 863 WINTSSIWK 871


>gi|317129281|ref|YP_004095563.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474229|gb|ADU30832.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 920

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 209/466 (44%), Positives = 279/466 (59%), Gaps = 36/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N   REP++ + WD ++++ +V  + +G   F+LHDGPPYANG+
Sbjct: 4   YKDTLLMPKTDFPMRGNLPNREPQMQEDWDSNKLYEKVQKRTEGRPLFILHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKILKD I RYK +  +   YVPGWD HGLPIE  + +    D KK LT ++ 
Sbjct: 64  IHMGHALNKILKDFIVRYKSMTGFHAPYVPGWDTHGLPIETALTKKGKVDRKK-LTIAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   +  Q   FKR GV  DW NPY+TLD  YEA QI+VFG+M+ +GYIY+GK
Sbjct: 123 REKCEEYALKQIDNQREQFKRLGVRGDWENPYVTLDHGYEAQQIKVFGEMAKKGYIYKGK 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +V       G       D    +WTT
Sbjct: 183 KPVYWSPSSESALAEAEIEYHDKR-SPSIYVAFDVVDGKDVLDG-------DEKYVIWTT 234

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+  L Y VV++            NK              FI+    L
Sbjct: 235 TPWTIPANLGISVHPDLDYVVVKVD----------GNK--------------FIVAQGLL 270

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
                        I KT+ G  LEN    HP  +R   V++ G+++T E+GTG VHTAPG
Sbjct: 271 EQLETELEWQDYEILKTVKGIKLENTVAKHPFYDRSSLVMV-GEHVTLEAGTGCVHTAPG 329

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG++D++   KYGL +L PVDD+G  TEEA  F GL    + N  + + L E  +L+   
Sbjct: 330 HGEDDFIVGQKYGLDVLCPVDDKGVMTEEAPMFEGL-FYDEANKPITEKLKEVGALLHLS 388

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              H YP+DWRTKKP ++RAT QWFAS++ FR+  +  I +V WVP
Sbjct: 389 FMTHSYPHDWRTKKPVMYRATAQWFASIKDFREDLLKEINEVNWVP 434



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 125/190 (65%), Gaps = 2/190 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    ++G V  VP +     GAD+LRLWVSSVDY  DV +   +L+Q++++YR
Sbjct: 588 TLDGEGRKMSKSVGNVV-VPDKVMKQLGADILRLWVSSVDYQADVRVSDNILKQVAEVYR 646

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R++LGN+HD+    + ++++D+  +DQY + +L  +VK++R SYE +QF  ++ 
Sbjct: 647 KIRNTFRFMLGNIHDFNPETDKVNFEDMSELDQYMIVKLNQLVKDVRNSYEEFQFGSVYN 706

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  ++LS+FY D+AKD LY    +   RR  QTV+   L+++ ++++PIL H  ++
Sbjct: 707 KVHNFCTIELSSFYMDLAKDTLYIQHASHPDRRGIQTVMYETLVALTKLMSPILSHTTDE 766

Query: 730 VWQNLPFAYT 739
           VW+++P   T
Sbjct: 767 VWKHIPGVTT 776


>gi|145245972|ref|XP_001395235.1| isoleucyl-tRNA synthetase [Aspergillus niger CBS 513.88]
 gi|134079947|emb|CAK48431.1| unnamed protein product [Aspergillus niger]
          Length = 1005

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/480 (42%), Positives = 283/480 (58%), Gaps = 42/480 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R     R   + +  DD   + +  ++   + FVLHDGPPYANG+L
Sbjct: 12  WSSTLKLPKSTFPARVTPADRTKYLQRCTDDLYAWQQ-RERPASQPFVLHDGPPYANGDL 70

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDE----DAKKDLTP 221
           H+GHALNK+LKDII R +L    ++RYVPGWDCHGLPIELK L++  E    +  + ++ 
Sbjct: 71  HIGHALNKVLKDIICRVQLGLGKRIRYVPGWDCHGLPIELKALEAQKELQGQEHNRPVSA 130

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           + +R  A K A  TVKAQM  F+ + V ADW N + T+D  +E  Q+ VF +M  +G IY
Sbjct: 131 ALVRKAARKLADRTVKAQMKGFRSFAVMADWENHWKTMDKAFEKRQLGVFREMVDKGLIY 190

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPP--STSGLLNEFLPDLGL 339
           R  KPV+WSPS+ TALAEAELEY E HVS +    + + S P   +   LL +   ++  
Sbjct: 191 RRFKPVYWSPSTGTALAEAELEYKEDHVSTAALVKYPLASIPEHLAQDPLLKD--KEISA 248

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PANAA++V+  L Y +VE  +                        + +++
Sbjct: 249 VIWTTTPWTLPANAAISVHPSLDYTIVESDT------------------------QGYLL 284

Query: 400 VASDLVPTLEAKWGTKL-VIKKTLAGSDLENCRYVHPV---DNRQCPVVIGGDYITTESG 455
           +A   +  LE      L VI   + GS L +     P+    + +   +I  D++T +SG
Sbjct: 285 IAQSRLEYLEGILKEDLSVIVPAIPGSKLADQTTYRPLFKGSDAEPQPIIAADFVTADSG 344

Query: 456 TGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAV 510
           +GLVH APGHG EDY   L  G+P  +PVDD GKFT++A      + SG  VL DGN AV
Sbjct: 345 SGLVHCAPGHGMEDYEACLSRGIPAFAPVDDNGKFTDKAMPSDPTRLSGKSVLSDGNAAV 404

Query: 511 VKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++Y++ Q  LI +  YEHKYPYDWR+K P I RATEQWFA V   R +AM A+  V +VP
Sbjct: 405 LEYVESQGLLITKHRYEHKYPYDWRSKLPIIIRATEQWFADVADIRGSAMTALEDVNFVP 464



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 100/168 (59%), Gaps = 3/168 (1%)

Query: 573 EAPGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           +AP Y   G D LR+WV+S DYT DV+IG QVL+ ++    K R T + LLG L D+R+ 
Sbjct: 671 QAPVYDALGPDALRMWVASSDYTRDVVIGKQVLQTVNTSLHKYRVTFKLLLGALSDFRLE 730

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
           + + YD L  +D+ AL  L + V   +++ E+++F+K    I R+  ++ S FY +  KD
Sbjct: 731 DRLPYDQLQQVDRIALKHLSDTVLACQKACENFEFYKAVNAINRWANLEFSAFYMEAIKD 790

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           RLYT    S +RR+ QT L      +  V+API P L E+ W++ P A
Sbjct: 791 RLYTYAENSTSRRAAQTTLFHIYHHLQEVLAPITPLLVEETWEHTPEA 838


>gi|254556997|ref|YP_003063414.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|254045924|gb|ACT62717.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum JDM1]
          Length = 932

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/469 (42%), Positives = 285/469 (60%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E E   +W +++V+ +    N+G+ +F+LHDGPPYANG
Sbjct: 2   RVKETLNLGKTKFKMRGNLPVKEVERQNVWAENKVYEQRQKLNEGKPSFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKI KD I RYK +  ++  YVPGWD HGLPIE K+ Q+  +  +K +T ++
Sbjct: 62  DIHMGHALNKITKDFIVRYKSMNGFRAPYVPGWDTHGLPIEQKLKQAGYD--RKKMTDNE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    K+A   V  Q   FKR GV  +W+NPYLTL PE+EAAQ+ VFG  + +  IYRG
Sbjct: 120 FRELCRKYALEQVDRQRDEFKRLGVAGEWDNPYLTLKPEFEAAQVRVFGAFAKRHLIYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           +KPV WS SS +ALAEAE+EY +     + Y    +        G+L++   D  + VWT
Sbjct: 180 QKPVFWSWSSESALAEAEVEYHDVTSPSAFYGEHVI-----DGKGVLDD---DTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + ++A   Y +V+           PA +  +             ++A++
Sbjct: 232 TTPWTIPASEGITIDASFDYVLVQ-----------PAGENRK------------FVLAAE 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+     ++G + V + KT+ G++LEN    HP DN +  V + GD++T +SGTGLVHTA
Sbjct: 269 LLDENAKRFGWEDVQVLKTVKGAELENILCEHPFDNSRHLVTMLGDFVTLDSGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++DY    +Y LPI +PVDD+G  T EAG  F+G+    D N   +  L     L+
Sbjct: 329 PGYGEDDYRIGKQYDLPIFAPVDDKGFLTAEAGDDFAGV-FYDDANKIALDKLKAAGLLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              PYEH YP+DWRTKKP IFRAT QWFASV   R   + ++  V++ P
Sbjct: 388 KYMPYEHSYPFDWRTKKPIIFRATPQWFASVGDMRDEILKSMDDVEFFP 436



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++R+WV+SVD + DV +  +  +Q++D Y+K R T+R++LGN  D+    N ++Y+D
Sbjct: 616 GAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRFMLGNTADFDPKTNRVAYED 675

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY   +L   V   ++ Y+ Y F  I++ +  F+ VDLSNFY D+AKD +Y    
Sbjct: 676 LASVDQYMETRLNEFVAETKDHYDHYDFLDIYKKLINFLTVDLSNFYLDIAKDIMYIDAE 735

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S +RRS QTV    L+++ ++  P+LPH  E++W
Sbjct: 736 DSHSRRSMQTVFYDVLVALTKLFTPMLPHTTEEIW 770


>gi|385840600|ref|YP_005863924.1| Isoleucyl-tRNA synthetase(Isoleucine--tRNA ligase) (IleRS)
           [Lactobacillus salivarius CECT 5713]
 gi|300214721|gb|ADJ79137.1| Isoleucyl-tRNA synthetase(Isoleucine--tRNA ligase) (IleRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 931

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/469 (43%), Positives = 288/469 (61%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MR N  VRE E    W++++V+ +    N+G+ +FVLHDGPPYANG
Sbjct: 2   KVKDTLNLGKTKFPMRGNLPVREVERQNEWEENKVYEQRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHA+NKI KD I R K +  ++  YVPGWD HGLPIE ++ ++  +  +K L+ ++
Sbjct: 62  NIHMGHAMNKISKDFIVRSKSMMGFRAPYVPGWDTHGLPIEQQLKKAGVD--RKALSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   FKR GV  +W+NPYLTL PEYEA QI VFG+M+ +G IY+G
Sbjct: 120 FREMCRQYALEQVDKQRKDFKRLGVAGEWDNPYLTLKPEYEAQQIRVFGKMAEKGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +ALAEAE+EY +     + Y             G+L++   +  + VWT
Sbjct: 180 KKPVFWSWSSESALAEAEVEYHDVTSPSAFYG-----EQVVDGKGVLDK---NTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + ++A   YAVV+                        D++K   ++A+D
Sbjct: 232 TTPWTIPASEGITIDATFDYAVVQHDD---------------------DERK--YVLAAD 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV      +G   + I KT+ G++LEN    HP    +  V + GD++TT++GTGLVHTA
Sbjct: 269 LVNADAELFGWNDVKIVKTVKGAELENVLCQHPFYPERKLVTMLGDFVTTDAGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D+   +KYGL +  PVDD+G  TE+ G+ F+GL    D N   +K L+E   L+
Sbjct: 329 PGFGEDDFNIGVKYGLDVYVPVDDKGYMTEDTGEDFAGL-FYEDANEVSLKKLEEAGVLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +  YEH YP+DWRTKKP IFRAT QWFASV+  R   + AI +V++ P
Sbjct: 388 KQMDYEHSYPFDWRTKKPIIFRATPQWFASVDKIRDQILGAINEVQFFP 436



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 103/167 (61%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GA+++RLWV SVD + DV +     +Q+++ YRK R T+R+LL N  D+  
Sbjct: 607 VPSEVIDKMGAEIIRLWVLSVDTSADVRVSMGSFQQIAESYRKFRNTVRFLLANTTDFDP 666

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +++++D++  ID+Y    +    K I ++Y +Y+F +I++ +  FI  DLS FY DVA
Sbjct: 667 AKDAVAFDEMESIDKYMTVLVNKFTKEILDAYANYEFMEIYKKLINFITTDLSAFYMDVA 726

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RRS QTVL   ++ + +++ PILPH  E++W+ L
Sbjct: 727 KDVVYIEAPDSKKRRSMQTVLYDVVVRLTKLMTPILPHTTEEIWKYL 773


>gi|227544867|ref|ZP_03974916.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|338204195|ref|YP_004650340.1| isoleucine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185141|gb|EEI65212.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|336449435|gb|AEI58050.1| isoleucine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 950

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 208/469 (44%), Positives = 291/469 (62%), Gaps = 38/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L +T F MR    V E +  +LW++++V+      N+G+  FVLHDGPPYANG
Sbjct: 21  RVKDTLNLGRTKFPMRGKLPVTEAQREQLWEENKVYELRQKLNEGKPTFVLHDGPPYANG 80

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHA+NKI KD I RYK +  Y+  YVPGWD HGLPIE ++ +S  +  K  LT  +
Sbjct: 81  NIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQLTKSGYDRKKMSLT--E 138

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ 
Sbjct: 139 FRDLCREYALKQVDKQRTDFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQA 198

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY +  V+++ + V ++        G L+    D  L VWT
Sbjct: 199 KKPVYWSWSSESALAEAEVEYHDV-VAKTAFFVEQIKDG----KGRLDN---DTYLVVWT 250

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWTVPA+ AVAVN K  Y+VV+           PAN          D +K   +VA+D
Sbjct: 251 TTPWTVPASEAVAVNPKFDYSVVK-----------PAN----------DDRK--FVVATD 287

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  L  K G     +   L G +LE     HP  +R   V +  DY+T ++GTGLVHTA
Sbjct: 288 LLEKLAEKLGWEDYEVVDHLMGQELEGMTTQHPYLDRDLLVGL-ADYVTADAGTGLVHTA 346

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G +DY    KY LPI +P++D+G  T+E G+ F G+    D +   ++ L+E  +L+
Sbjct: 347 PGYGDDDYNFGKKYDLPIFAPINDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALL 405

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++EP +H YP+DWRTK+P IFRAT+QWF S+E  RQ  +DA+  VK+ P
Sbjct: 406 LQEPLQHSYPFDWRTKQPIIFRATDQWFVSIEKMRQNILDALEDVKYHP 454



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D+    N++SY+ 
Sbjct: 634 GAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYEK 693

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L + +K +RE +++Y F   ++ +  F+  DLS FY ++AKD LY    
Sbjct: 694 LQSVDKYMLVKLNHFLKTMREDFDNYDFLDAYKALINFVNNDLSAFYMNIAKDVLYIEAE 753

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S  RRS QTV    LL++V+++ PILPH  E+VW
Sbjct: 754 NSEVRRSMQTVFYDILLTLVKLLTPILPHTTEEVW 788


>gi|288553142|ref|YP_003425077.1| isoleucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544302|gb|ADC48185.1| isoleucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 921

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 207/467 (44%), Positives = 287/467 (61%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N    EP+  + W++  ++  V  + +G   FVLHDGPPYANG+
Sbjct: 3   YKQTLLMPKTDFPMRGNLPNNEPKRQEKWNEQDIYQAVQKRTEGRPLFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNK+LKD I RYK +  +   YVPGWD HGLPIE  + ++  +  +K++T +  
Sbjct: 63  IHMGHALNKVLKDFIVRYKSMNGFHAPYVPGWDTHGLPIETALTKN-GKVKRKEMTVAAF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A+  V  Q   F R GV  DW NPY+TLD EYEA QI+VFG M+ +GYIY+GK
Sbjct: 122 RKLCEEYAREQVSRQCEQFMRLGVRGDWWNPYVTLDKEYEAQQIKVFGDMAKKGYIYKGK 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F +       +G       D  + +WTT
Sbjct: 182 KPVYWSPSSESALAEAEIEYHDKR-SPSIYVAFNIKDGKNVLAG-------DEKIIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++V+ +L Y VV++                       D+K V   VA+ L
Sbjct: 234 TPWTIPANLGISVHPELDYNVVKVN----------------------DEKYV---VAAGL 268

Query: 405 VPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           +  L+A++  + V ++KT+ G +LE+    HP+  R   +V+ GD++T ++GTG VHTAP
Sbjct: 269 LEKLQAEFEWEQVEVEKTVKGQELEHVVATHPLYGRDS-LVMCGDHVTLDAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+EDY+   KYGL +L PVDD+G  TEEA  F G+      N  + + LDE  +L+  
Sbjct: 328 GHGEEDYLVGQKYGLDVLCPVDDKGNMTEEAPGFEGM-FYDQANKPITEKLDEVGALMKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               H Y +DWRTKKP I+RAT QWFAS+  FR   + AI  V+W+P
Sbjct: 387 TFITHSYAHDWRTKKPVIYRATAQWFASIADFRDELLQAINDVEWIP 433



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 118/186 (63%), Gaps = 2/186 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +++G  +    ++G V  VP       GAD+LRLWV+SVDY  DV +  ++L+Q+S+ YR
Sbjct: 587 ALDGQGRKMSKSVGNVV-VPNDVMKQLGADILRLWVASVDYQSDVRVSDKILKQVSESYR 645

Query: 611 KLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T R+LLGNLHD+    N +  +DL  +  + L +L  +++ ++++Y+ YQF  ++ 
Sbjct: 646 KIRNTFRFLLGNLHDFDPAVNRVKNEDLDGVHLFMLVKLNEVIEKVKDAYDQYQFSTVYH 705

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            I  F  ++LS+FY D+AKD LY        RR  QTV+   +L++ ++++PIL H A++
Sbjct: 706 TIHNFCTIELSSFYMDLAKDTLYIEHADHAERRKIQTVMYESVLTLTKLVSPILSHTADE 765

Query: 730 VWQNLP 735
           VW+ +P
Sbjct: 766 VWEEIP 771


>gi|408790499|ref|ZP_11202118.1| Isoleucyl-tRNA synthetase [Lactobacillus florum 2F]
 gi|408520223|gb|EKK20311.1| Isoleucyl-tRNA synthetase [Lactobacillus florum 2F]
          Length = 933

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 283/469 (60%), Gaps = 36/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E E  + WD +Q++ +    N+G+  FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFKMRGNLPVKELERQQEWDANQLYEQRQKLNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKI KD+I RYK +  Y+  YVPGWD HGLPIE + L++   D +K +  + 
Sbjct: 62  DIHMGHALNKITKDLIVRYKSMSGYRAPYVPGWDTHGLPIEQQ-LKNAGYD-RKQMDTNA 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   V  Q A FKR GV  DW++PYLTL PEYEAA+I VFG+M+ QG IY+G
Sbjct: 120 FRKLCHDYALKQVDRQRAEFKRLGVTGDWDHPYLTLQPEYEAAEIRVFGKMAAQGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV WS SS +ALAEAE+EY +     + +A   +        G+L+E  PD  + VWT
Sbjct: 180 LKPVIWSWSSESALAEAEIEYHDVESPSAFFAEKVL-----DGKGVLDE--PDTYMIVWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  V +    +Y+VV+                        D      ++A++
Sbjct: 233 TTPWTIPASEGVTIAPDFEYSVVQ-----------------------HDDDPNRYVLATE 269

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+      +G K V   KT+ G  L+    +HP D  +  V + GD++T ++GTG+VHTA
Sbjct: 270 LLQKDAELFGWKNVQTIKTVPGRALDRITALHPFDENKQLVTMLGDFVTADAGTGMVHTA 329

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++DY+   +YGLPI +PVD++G  T+ AG  F+G+    D N   +  L +Q  LI
Sbjct: 330 PGYGEDDYLIGKQYGLPIFAPVDNKGYLTKAAGPDFAGV-FYEDANQVALDKLKQQGQLI 388

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              PY+H YP+DWRTKKP I+RAT QWFASV+  R   + AI  V + P
Sbjct: 389 HYMPYKHSYPFDWRTKKPVIYRATPQWFASVDQIRDQILAAIETVTFRP 437



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 101/158 (63%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GAD++RLWV+SVD   DV +  +  +++SD Y+K+R T+RYLL N  D+    +++SY+ 
Sbjct: 617 GADIVRLWVTSVDTDSDVRVSMENFKKVSDGYKKIRNTIRYLLANTSDFEPDEDAVSYEQ 676

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQ+ + +L  ++  +R +Y+ Y F  + + + +FI  DLS FY D AKD LY    
Sbjct: 677 LNPVDQFIMIKLNQLITEVRTAYDQYDFMTVNKKLFQFITGDLSAFYLDFAKDILYIDSA 736

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RRS QTVL   L+ + +++ PI+PH  E++WQ L
Sbjct: 737 NSQRRRSMQTVLYQSLVVLTKLLTPIIPHTTEEIWQFL 774


>gi|38490690|ref|NP_941055.1| isoleucine--tRNA ligase, mitochondrial precursor [Mus musculus]
 gi|81896262|sp|Q8BIJ6.1|SYIM_MOUSE RecName: Full=Isoleucine--tRNA ligase, mitochondrial; AltName:
           Full=Isoleucyl-tRNA synthetase; Short=IleRS; Flags:
           Precursor
 gi|26339478|dbj|BAC33410.1| unnamed protein product [Mus musculus]
 gi|30931090|gb|AAH52403.1| Isoleucine-tRNA synthetase 2, mitochondrial [Mus musculus]
          Length = 1012

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/471 (42%), Positives = 279/471 (59%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+T+F M+     +   E EI +     +++    ++     F LHDGPPY
Sbjct: 58  GRYRDTVLLPQTSFPMKLLGRQQSDMELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ +++  KV +VPGWDCHGLPIE KVL  L  DA+  L+
Sbjct: 118 ANGDPHVGHALNKILKDIANRFHMMRGSKVHFVPGWDCHGLPIETKVLSELGVDAQ-SLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FA+A ++ Q ++F R+GV ADWNN Y T DP+YEA Q+ VF QM  +G +
Sbjct: 177 AMEIREKARSFAQAAIEKQKSAFVRWGVMADWNNCYYTFDPKYEAKQLRVFYQMYEKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV+WSPSSRTALAEAELEY   HVSRSIY  F ++  PP    L +   P + + 
Sbjct: 237 YRSYKPVYWSPSSRTALAEAELEYNPEHVSRSIYVRFPLLRPPPKLESLTDASSP-VSVL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN A+    + +YAVV               K S  G++         I+
Sbjct: 296 VWTTQPWTIPANQAICYMPEAKYAVV---------------KCSASGHLY--------IL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A D +  + +   T   +    +G DLE     HP+   +   ++   ++T   GTGLVH
Sbjct: 333 AEDKIAPVASALETTFDVVAAFSGVDLEGGTCSHPLTPDKVSPLLPATHVTMAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD+ G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYSVASQHSLPMDCLVDEGGMFTDAAGPELQNKAVLKEGTDVVIKMLQATKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++ EE   H YP DWRTK P + RA++QWF ++   + AA +++  VK++P
Sbjct: 453 VLKEENIVHSYPCDWRTKTPVLIRASKQWFVNITDIKAAAKESLKTVKFIP 503



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 111/189 (58%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGAD+LR W++  +   +V IGP VL    D   KLR TLR+LLGNL  +    +S+ 
Sbjct: 689 PPYGADILRWWIAESNVFTEVTIGPSVLSAARDDISKLRNTLRFLLGNLTGFNPETDSVP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
             ++ +IDQY L  +++    I +SY+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 749 VKNMYVIDQYMLHLIQDFATKITDSYKQYDFGKVVRLLKAFYTRELSSFYFSIVKDRLYC 808

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L+  L  +VR  APILPHLAE+V+Q++P+       +  + VF + 
Sbjct: 809 ENEKDPKRRSCQTALAEILDVLVRAFAPILPHLAEEVFQHIPYV------TEPKSVFRTG 862

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 863 WINTSSIWK 871


>gi|403277474|ref|XP_003930385.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Saimiri
           boliviensis boliviensis]
          Length = 1012

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 198/471 (42%), Positives = 283/471 (60%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+TTF M+     +   E +I +     +++    ++     F LHDGPPY
Sbjct: 58  GRYRDTVLLPQTTFPMKLLGRQQPDTELDIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ ++   K+ +VPGWDCHGLPIE+KVL  L  +A+ +L+
Sbjct: 118 ANGDPHVGHALNKILKDIANRFHMMTGSKIHFVPGWDCHGLPIEVKVLSELGGEAQ-NLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FAKA ++ Q  +F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +
Sbjct: 177 AIEIREKARSFAKAAIEKQKLAFIRWGIMADWNNCYFTFDGKYEAKQLRTFYQMYEKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++   P +   
Sbjct: 237 YRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSFL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTT PWT+PAN AV    + +YAVV               K S+ G++         ++
Sbjct: 296 IWTTQPWTIPANQAVCYMPESKYAVV---------------KCSKSGDLY--------VL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A+D V ++ +   T      T +G +LEN    HP+   +   ++  +++T   GTGLVH
Sbjct: 333 AADKVASVASTLETTFETISTFSGVELENGTCSHPLIPDKASPLLPANHVTMAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYSVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ EE   H YPYDWRTKKP + RA++QWF ++   +  A + + +VK++P
Sbjct: 453 LLKEEKLVHSYPYDWRTKKPVVIRASKQWFINISDIKTTAKELLKKVKFIP 503



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/189 (44%), Positives = 111/189 (58%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 689 PPYGADVLRWWVAESNVFTEVTIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I E Y+ Y F K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 749 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLQTFYTRELSNFYFSIIKDRLYC 808

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++PF          + VF + 
Sbjct: 809 EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIPFI------KEPKSVFRTG 862

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 863 WISTSSIWK 871


>gi|301300414|ref|ZP_07206616.1| isoleucine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852016|gb|EFK79698.1| isoleucine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 931

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/469 (43%), Positives = 288/469 (61%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MR N  VRE E    W++++V+ +    N+G+ +FVLHDGPPYANG
Sbjct: 2   KVKDTLNLGKTKFPMRGNLPVREVERQNEWEENKVYEQRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHA+NKI KD I R K +  ++  YVPGWD HGLPIE ++ ++  +  +K L+ ++
Sbjct: 62  NIHMGHAMNKISKDFIVRSKSMMEFRTPYVPGWDTHGLPIEQQLKKAGVD--RKALSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   FKR GV  +W+NPYLTL PEYEA QI VFG+M+ +G IY+G
Sbjct: 120 FREMCRQYALEQVDKQRKDFKRLGVAGEWDNPYLTLKPEYEAQQIRVFGKMAEKGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +ALAEAE+EY +     + Y             G+L++   +  + VWT
Sbjct: 180 KKPVFWSWSSESALAEAEVEYHDVTSPSAFYG-----EQVVDGKGVLDK---NTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + ++A   YAVV+                        D++K   ++A+D
Sbjct: 232 TTPWTIPASEGITIDATFDYAVVQHDD---------------------DERK--YVLAAD 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV      +G   + I KT+ G++LEN    HP    +  V + GD++TT++GTGLVHTA
Sbjct: 269 LVNADAELFGWNDVKIVKTVKGAELENVLCQHPFYPERKLVTMLGDFVTTDAGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D+   +KYGL +  PVDD+G  TE+ G+ F+GL    D N   +K L+E   L+
Sbjct: 329 PGFGEDDFNIGVKYGLDVYVPVDDKGYMTEDTGEDFAGL-FYEDANEVSLKKLEEAGVLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +  YEH YP+DWRTKKP IFRAT QWFASV+  R   + AI +V++ P
Sbjct: 388 KQMDYEHSYPFDWRTKKPIIFRATPQWFASVDKIRDQILGAINEVQFFP 436



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 103/167 (61%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GA+++RLWV SVD + DV +     +Q+++ YRK R T+R+LL N  D+  
Sbjct: 607 VPSEVIDKMGAEIIRLWVLSVDTSADVRVSMGSFQQIAESYRKFRNTVRFLLANTTDFDP 666

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +++++D++  ID+Y    +    K I ++Y +Y+F +I++ +  FI  DLS FY DVA
Sbjct: 667 AKDAVAFDEMESIDKYMTVLVNKFTKEILDAYANYEFMEIYKKLINFITTDLSAFYMDVA 726

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RRS QTVL   ++ + +++ PILPH  E++W+ L
Sbjct: 727 KDVVYIEAPDSKKRRSMQTVLYDVVVRLTKLMTPILPHTTEEIWKYL 773


>gi|212526158|ref|XP_002143236.1| isoleucyl-tRNA synthetase, putative [Talaromyces marneffei ATCC
           18224]
 gi|210072634|gb|EEA26721.1| isoleucyl-tRNA synthetase, putative [Talaromyces marneffei ATCC
           18224]
          Length = 1001

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/474 (42%), Positives = 287/474 (60%), Gaps = 30/474 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LP++TF  RA    +   + +  D+   + R  ++   + FVLHDGPPYANG L
Sbjct: 5   WTSTLKLPRSTFPARAPVADQTKYLRRCSDELYAWQR-ENRPASDTFVLHDGPPYANGEL 63

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAK---KDL-TP 221
           H+GHALNKILKDIINR +L +  ++ Y PGWDCHGLPIELK LQ+  +D     K L + 
Sbjct: 64  HVGHALNKILKDIINRTQLSRGKRIHYAPGWDCHGLPIELKALQAQQKDGNDFSKGLGSA 123

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           + +R  A K A+ TVK QM  F+ +GV ADW   Y TLD ++E +Q+ +F +M  +G IY
Sbjct: 124 ATIRKAARKLAEKTVKEQMRGFQGWGVMADWEGHYKTLDKKFEMSQLGIFREMVEKGLIY 183

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           R  KPV+WSPS+ TALAEAELEY E H+S + +  F +V  P             L   +
Sbjct: 184 RRFKPVYWSPSTGTALAEAELEYNENHISTTAFVRFPLVKVPEQIRSNPLVDTDSLSAVI 243

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PANAA+A++  L Y +V  +S   G      ++ +   ++LK+  +V     
Sbjct: 244 WTTTPWTLPANAAIAISESLNYLIV--KSSNHGQLLIAESRLTYFQDMLKEDLQV----- 296

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
             LVP+++   G++L  + T         R + P D  +   ++  D++T +SG+GLVH 
Sbjct: 297 --LVPSIQ---GSELCQETTY--------RPLFPRDGIEEQPIVAADFVTADSGSGLVHC 343

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDE 516
           APGHG +DY   L  G+   +PV+DEG+FT+EA        SG  VL +GN  V++Y++ 
Sbjct: 344 APGHGMDDYEVCLAQGIRAFAPVNDEGRFTDEAMPHKPSFLSGKSVLDEGNTLVLQYVES 403

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              L+ +  YEHKYPYDWR+KKP I RATEQWFA V   R++A+ ++  V +VP
Sbjct: 404 TNQLLNQHKYEHKYPYDWRSKKPIIIRATEQWFADVANIRESALASLEDVTFVP 457



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 94/159 (59%), Gaps = 1/159 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           G D LRLWV+S DYT DV+IG QVL+ ++    K R T + LLG L D+    N   Y+D
Sbjct: 674 GPDALRLWVASSDYTRDVVIGQQVLQTVNTSLHKFRVTFKLLLGALGDFDPKVNMRQYED 733

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  ID+ AL QL  +V   R ++++++F+K    + R+  ++ S FY +  KDRLYT   
Sbjct: 734 LHKIDRQALMQLTRLVDTCRNAFDNFEFYKAVNALNRWANLEFSAFYMETLKDRLYTEAE 793

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
            S +RR+ QT L      +  V+API P L E+ W++ P
Sbjct: 794 NSASRRAAQTTLFYIYTYLQEVLAPITPLLVEESWEHTP 832


>gi|320101891|ref|YP_004177482.1| isoleucyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319749173|gb|ADV60933.1| isoleucyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 972

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 210/468 (44%), Positives = 271/468 (57%), Gaps = 27/468 (5%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENF-VLHDGPPYANGN 164
           YK T++LPKTTF M+AN   REP+    W    ++ ++     G    VLHDGPPYANG 
Sbjct: 8   YKATLNLPKTTFDMKANLTQREPQRQAQWLQRDLYGQIRQARRGAPVKVLHDGPPYANGE 67

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGH LNK+LKD + R+  LQ Y   YVPGWDCHGLPIE KV++ L   A++ L  S++
Sbjct: 68  IHMGHLLNKVLKDFVVRWWTLQGYDSPYVPGWDCHGLPIEHKVVRDLGPKARQ-LDASQI 126

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    + A   V  Q A F+R GV  DW  PYLTLD  YEA  ++V   +  +GY++R K
Sbjct: 127 RQLCHEEAMKWVNIQSAQFQRLGVLGDWQRPYLTLDHRYEAGIVDVLADLVEKGYVFRQK 186

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           K +HW    RTALAEAELEY +   S SIY +F M S  PS  G   E   D    +WTT
Sbjct: 187 KAIHWDIHDRTALAEAELEY-QDITSPSIYVLFPMTSGVPSCWGGQPE---DWSAMIWTT 242

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+AV+ +L YA V  +     D    A ++     VL  Q  V  ++A   
Sbjct: 243 TPWTLPANLAIAVHPRLDYAGVRYR-----DPETGAERR-----VLLCQSLVAKVMAERS 292

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           V        ++  I     G+DLE   Y H   +R    V+  DY+  E GTGLVHTAPG
Sbjct: 293 V--------SQYDIVGVCKGADLEIATYRHVFLDRTGRFVL-ADYVAAEDGTGLVHTAPG 343

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG EDY T L YGLP   PVD+ G++T++A  +     + + N  VV+ L E  +L    
Sbjct: 344 HGAEDYRTGLAYGLPAYCPVDESGRYTDDAPDWLRGKGVFEANPLVVQRLKEDGTLFHSA 403

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           P  H YP+ WR+KKP IFRATEQWF  V+  G RQ  ++ IGQV W+P
Sbjct: 404 PVRHSYPHGWRSKKPIIFRATEQWFIKVDHNGLRQRVLEQIGQVTWLP 451



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 111/188 (59%), Gaps = 13/188 (6%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP  E   YGADVLRL+V+S+DY  DV +G   +++ S+ YRK+R T R+LL NL D++ 
Sbjct: 639 VPATET--YGADVLRLYVASMDYADDVRVGETGIKEASEAYRKIRNTFRFLLANLEDYQR 696

Query: 629 GNSISY----DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYF 684
            +   +     DL  +D++ L +L  ++++   SY +++F+++ Q I +F+ VDLS+FY 
Sbjct: 697 FDPERHAPQPSDLVELDRWILGRLNALIRDCEASYNAFEFYRVVQKITQFVNVDLSSFYL 756

Query: 685 DVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGS 744
           D  KDRLY        RRS Q  L      + R+++PIL H  E++W+ LP       GS
Sbjct: 757 DAIKDRLYAELPEGPERRSAQFALFRLHDVLTRLLSPILVHTCEELWERLP-------GS 809

Query: 745 AAEFVFES 752
           AA    ES
Sbjct: 810 AATAKPES 817


>gi|184153233|ref|YP_001841574.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|254782415|sp|B2G6L2.1|SYI_LACRJ RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|183224577|dbj|BAG25094.1| isoleucyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
          Length = 931

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 208/469 (44%), Positives = 290/469 (61%), Gaps = 38/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L +T F MR    V E +  +LW++++V+      N+G+  FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGRTKFPMRGKLPVTEAQREQLWEENKVYELRQKLNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHA+NKI KD I RYK +  Y+  YVPGWD HGLPIE ++ +S  +  K  LT  +
Sbjct: 62  NIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQLTKSGYDRKKMSLT--E 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ 
Sbjct: 120 FRDLCREYALKQVDKQRTDFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQA 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY +  V+++ + V ++        G L+    D  L VWT
Sbjct: 180 KKPVYWSWSSESALAEAEVEYHDV-VAKTAFFVEQIKDG----KGRLDN---DTYLVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWTVPA+ AVAVN K  Y+VV            PAN          D +K   +VA+D
Sbjct: 232 TTPWTVPASEAVAVNPKFDYSVVN-----------PAN----------DDRK--FVVATD 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  L  K G     +   L G +LE     HP  +R   V +  DY+T ++GTGLVHTA
Sbjct: 269 LLEKLAEKLGWEDYEVVDHLMGQELEGMTTQHPYLDRDLLVGL-ADYVTADAGTGLVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G +DY    KY LPI +P++D+G  T+E G+ F G+    D +   ++ L+E  +L+
Sbjct: 328 PGYGDDDYNFGKKYDLPIFAPINDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALL 386

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++EP +H YP+DWRTK+P IFRAT+QWF S+E  RQ  +DA+  VK+ P
Sbjct: 387 LQEPLQHSYPFDWRTKQPIIFRATDQWFVSIEKMRQNILDALEDVKYHP 435



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D+    N++SY+ 
Sbjct: 615 GAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYEK 674

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L + +K +RE +++Y F   ++++  F+  DLS FY ++AKD LY    
Sbjct: 675 LQSVDKYMLVKLNHFLKTMREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAE 734

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S  RRS QTV    LL++V+++ PILPH  E+VW
Sbjct: 735 NSEVRRSMQTVFYDILLTLVKLLTPILPHTTEEVW 769


>gi|148543832|ref|YP_001271202.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|148530866|gb|ABQ82865.1| Isoleucyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
          Length = 960

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 208/469 (44%), Positives = 290/469 (61%), Gaps = 38/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L +T F MR    V E +  +LW++++V+      N+G+  FVLHDGPPYANG
Sbjct: 31  RVKDTLNLGRTKFPMRGKLPVTEAQREQLWEENKVYELRQKLNEGKPTFVLHDGPPYANG 90

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHA+NKI KD I RYK +  Y+  YVPGWD HGLPIE ++ +S  +  K  LT  +
Sbjct: 91  NIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQLTKSGYDRKKMSLT--E 148

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ 
Sbjct: 149 FRDLCREYALKQVDKQRTDFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQA 208

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY +  V+++ + V ++        G L+    D  L VWT
Sbjct: 209 KKPVYWSWSSESALAEAEVEYHDV-VAKTAFFVEQIKDG----KGRLDN---DTYLVVWT 260

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWTVPA+ AVAVN K  Y+VV            PAN          D +K   +VA+D
Sbjct: 261 TTPWTVPASEAVAVNPKFDYSVVN-----------PAN----------DDRK--FVVATD 297

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  L  K G     +   L G +LE     HP  +R   V +  DY+T ++GTGLVHTA
Sbjct: 298 LLEKLAEKLGWEDYEVVDHLMGQELEGMTTQHPYLDRDLLVGL-ADYVTADAGTGLVHTA 356

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G +DY    KY LPI +P++D+G  T+E G+ F G+    D +   ++ L+E  +L+
Sbjct: 357 PGYGDDDYNFGKKYDLPIFAPINDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALL 415

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++EP +H YP+DWRTK+P IFRAT+QWF S+E  RQ  +DA+  VK+ P
Sbjct: 416 LQEPLQHSYPFDWRTKQPIIFRATDQWFVSIEKMRQNILDALEDVKYHP 464



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D+    N++SY+ 
Sbjct: 644 GAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYEK 703

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L + +K +RE +++Y F   ++++  F+  DLS FY ++AKD LY    
Sbjct: 704 LQSVDKYMLVKLNHFLKTMREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAE 763

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S  RRS QTV    LL++V+++ PILPH  E+VW
Sbjct: 764 NSEVRRSMQTVFYDILLTLVKLLTPILPHTTEEVW 798


>gi|227364736|ref|ZP_03848785.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682637|ref|ZP_08162154.1| isoleucine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|227070195|gb|EEI08569.1| isoleucyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324978476|gb|EGC15426.1| isoleucine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 950

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 208/469 (44%), Positives = 290/469 (61%), Gaps = 38/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L +T F MR    V E +  +LW++++V+      N+G+  FVLHDGPPYANG
Sbjct: 21  RVKDTLNLGRTKFPMRGKLPVTEAQREQLWEENKVYELRQKLNEGKPTFVLHDGPPYANG 80

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHA+NKI KD I RYK +  Y+  YVPGWD HGLPIE ++ +S  +  K  LT  +
Sbjct: 81  NIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQLTKSGYDRKKMSLT--E 138

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ 
Sbjct: 139 FRDLCREYALKQVDKQRTDFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQA 198

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY +  V+++ + V ++        G L+    D  L VWT
Sbjct: 199 KKPVYWSWSSESALAEAEVEYHDV-VAKTAFFVEQIKDG----KGRLDN---DTYLVVWT 250

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWTVPA+ AVAVN K  Y+VV            PAN          D +K   +VA+D
Sbjct: 251 TTPWTVPASEAVAVNPKFDYSVVN-----------PAN----------DDRK--FVVATD 287

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  L  K G     +   L G +LE     HP  +R   V +  DY+T ++GTGLVHTA
Sbjct: 288 LLEKLAEKLGWEDYEVVDHLMGQELEGMTTQHPYLDRDLLVGL-ADYVTADAGTGLVHTA 346

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G +DY    KY LPI +P++D+G  T+E G+ F G+    D +   ++ L+E  +L+
Sbjct: 347 PGYGDDDYNFGKKYDLPIFAPINDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALL 405

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++EP +H YP+DWRTK+P IFRAT+QWF S+E  RQ  +DA+  VK+ P
Sbjct: 406 LQEPLQHSYPFDWRTKQPIIFRATDQWFVSIEKMRQNILDALEDVKYHP 454



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 100/155 (64%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D+    N++SY+ 
Sbjct: 634 GAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYEK 693

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L + +K +RE +++Y F   ++++  F+  DLS FY ++AKD LY    
Sbjct: 694 LQSVDKYMLVKLNHFLKTMREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAE 753

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S  RRS QTV    LL++V+++ PILPH  E+VW
Sbjct: 754 NSEVRRSMQTVFYDILLTLVKLLTPILPHTTEEVW 788


>gi|402297356|ref|ZP_10817128.1| isoleucyl-tRNA ligase [Bacillus alcalophilus ATCC 27647]
 gi|401727406|gb|EJT00596.1| isoleucyl-tRNA ligase [Bacillus alcalophilus ATCC 27647]
          Length = 924

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 212/469 (45%), Positives = 288/469 (61%), Gaps = 40/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
            YK T+ +PKT F MR N    EP+  + W    ++ +V ++  G+  F+LHDGPPYANG
Sbjct: 3   EYKKTLLMPKTNFPMRGNLPQNEPKRQEKWSSEDIYQKVQERTKGKPLFILHDGPPYANG 62

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKILKD+I RYK +  +   YVPGWD HGLPIE  + +S  +  +K+++ + 
Sbjct: 63  DIHMGHALNKILKDMIVRYKSMSGFHAPYVPGWDTHGLPIETALTKS-GKVKRKEMSVAA 121

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   F R GV  DW NPY+TLD  YEA QI+VFG M+ +GYIY+G
Sbjct: 122 FRKLCEEYALKQVDRQREQFLRLGVRGDWWNPYITLDKAYEAQQIKVFGDMAKKGYIYKG 181

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS +ALAEAE+EY +   S SIY  F +V    +  G       D    +WT
Sbjct: 182 KKPVYWSPSSESALAEAEIEYHDKR-SPSIYVAFDVVDGKKALEG-------DEKFIIWT 233

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A++V+  L+Y+VV +++          NK                +VAS 
Sbjct: 234 TTPWTIPANLAISVHPDLEYSVVLVEN----------NK---------------YVVASG 268

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+ TL  E  W T  V+ KT+ GS+LE     HP+  R   VVI G+++T ++GTG VHT
Sbjct: 269 LLETLVKELDWATHEVL-KTVKGSELEFVLTQHPIYER-TSVVILGEHVTLDAGTGCVHT 326

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY+   KYGL +L PVDD+G  T+EA  F GL      N  + + L+E  +L+
Sbjct: 327 APGHGEDDYLVGQKYGLDVLCPVDDKGYLTDEAPGFEGL-FYDAANKPIGEKLEEVGALL 385

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                 H Y +DWRTKKP I+RAT QWFAS+E FR   + AI +V+W+P
Sbjct: 386 KLSFITHSYAHDWRTKKPVIYRATAQWFASIENFRSELLKAIEEVEWIP 434



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 112/168 (66%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           +P       GAD+LRLWV+SVDY  DV +  ++L+Q+S+ YRK+R T R+LLGNLHD+  
Sbjct: 605 IPNDVMKQLGADILRLWVASVDYQADVRVSDEILKQVSESYRKIRNTFRFLLGNLHDFNP 664

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + ++ + L  ++ + L +L  +V+ ++ +YE Y F  ++ I+  F  ++LS+FY D+A
Sbjct: 665 TTDQVADEQLDGVNLFMLVKLNEVVEKVKTAYEEYNFSGVYHILHNFCTIELSSFYMDLA 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY   +    RR+ QTV+   ++ + ++I+PILPH A++VW+N+P
Sbjct: 725 KDTLYIEHSDHPARRAIQTVMYETVVKLSKLISPILPHTADEVWENIP 772


>gi|116334043|ref|YP_795570.1| isoleucyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|122269273|sp|Q03QI3.1|SYI_LACBA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|116099390|gb|ABJ64539.1| Isoleucyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 937

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 290/469 (61%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E +  K W +++++      N+G+  F+LHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFKMRGNLPVKEVDRQKAWAENKMYEARQKLNEGKPTFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            +HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ ++  +  +K ++ ++
Sbjct: 62  PIHMGHALNKISKDIIVRYKSMSGFRAPYVPGWDTHGLPIEQQLTKAGYD--RKKMSTAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   FKR GV A+W+NPYLTL PE+EAA++ VFG+M+ +G IY+G
Sbjct: 120 FRDLCREYALKQVDQQREGFKRLGVSAEWDNPYLTLKPEFEAAEVRVFGEMAKRGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +A+AEAE+EY +     + Y   ++V       G+L+    D  L VWT
Sbjct: 180 KKPVYWSWSSESAMAEAEVEYHDVTSPSAFYGE-QVVDG----KGVLDT---DTYLVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P +  + ++A ++YAVV+           PAN          D +K   ++A+D
Sbjct: 232 TTPWTIPGSEGITIDAGIEYAVVK-----------PAN----------DDRK--FVLAAD 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV      +G + V + KT+ G DL+N    HP    +  VV+ GD++TTESGTGLVHTA
Sbjct: 269 LVDQNAEMFGWEDVQVIKTVMGQDLDNVTAQHPFIADRKLVVMLGDFVTTESGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D+     Y LP+L PVDD+G  T EAG  F+G+    D N   +  L    +L+
Sbjct: 329 PGLGEDDFNVGALYHLPVLVPVDDKGYMTAEAGADFAGV-FYEDANQIALDKLKAANALL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              PYEH YP+DWRTKKP IFRAT QWFASV+  R   +  +  VK+ P
Sbjct: 388 KYMPYEHSYPFDWRTKKPVIFRATPQWFASVDKIRDEILAQLKDVKFQP 436



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVD + DV +  +   ++SD Y+KLR T+RYLL N  D+    ++I+ DD
Sbjct: 616 GADIVRLWVTSVDSSADVRVSTEAFVKISDSYKKLRNTMRYLLANTSDFDPQTDAIAVDD 675

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D++ L+QL    K++R  Y+ Y F  I++ +  F++ DLS FY D AKD LY    
Sbjct: 676 LQPVDRHMLYQLNEFAKSVRAHYDHYDFLNIYKELINFVVSDLSAFYLDFAKDILYIEAA 735

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RRS QTV     +S+ ++I PILPH AE++W  L
Sbjct: 736 DSPVRRSMQTVFYQIAVSLTKLITPILPHTAEEIWDFL 773


>gi|350637532|gb|EHA25889.1| hypothetical protein ASPNIDRAFT_212883 [Aspergillus niger ATCC
           1015]
          Length = 1524

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 205/480 (42%), Positives = 282/480 (58%), Gaps = 42/480 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R     R   + +  DD   + +  ++   + FVLHDGPPYANG+L
Sbjct: 531 WSSTLKLPKSTFPARVTPADRTKYLQRCTDDLYAWQQ-RERPASQPFVLHDGPPYANGDL 589

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDE----DAKKDLTP 221
           H+GHALNK+LKDII R +L    ++RYVPGWDCHGLPIELK L++  E    +    ++ 
Sbjct: 590 HIGHALNKVLKDIICRVQLGLGKRIRYVPGWDCHGLPIELKALEAQKELQGQEHNGPVSA 649

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           + +R  A K A  TVKAQM  F+ + V ADW N + T+D  +E  Q+ VF +M  +G IY
Sbjct: 650 ALVRKAARKLADRTVKAQMKGFRSFAVMADWENHWKTMDKAFEKRQLGVFREMVDKGLIY 709

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPP--STSGLLNEFLPDLGL 339
           R  KPV+WSPS+ TALAEAELEY E HVS +    + + S P   +   LL +   ++  
Sbjct: 710 RRFKPVYWSPSTGTALAEAELEYKEDHVSTAALVKYPLASIPEHLAQDPLLKD--KEISA 767

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PANAA++V+  L Y +VE  +                        + +++
Sbjct: 768 VIWTTTPWTLPANAAISVHPSLDYTIVESDT------------------------QGYLL 803

Query: 400 VASDLVPTLEAKWGTKL-VIKKTLAGSDLENCRYVHPV---DNRQCPVVIGGDYITTESG 455
           +A   +  LE      L VI   + GS L +     P+    + +   +I  D++T +SG
Sbjct: 804 IAQSRLEYLEGILKEDLSVIVPAIPGSKLADQTTYRPLFKGSDAEPQPIIAADFVTADSG 863

Query: 456 TGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAV 510
           +GLVH APGHG EDY   L  G+P  +PVDD GKFT++A      + SG  VL DGN AV
Sbjct: 864 SGLVHCAPGHGMEDYEACLSRGIPAFAPVDDNGKFTDKAMPSDPTRLSGKSVLSDGNAAV 923

Query: 511 VKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++Y++ Q  LI +  YEHKYPYDWR+K P I RATEQWFA V   R +AM A+  V +VP
Sbjct: 924 LEYVESQGLLITKHRYEHKYPYDWRSKLPIIIRATEQWFADVADIRGSAMTALEDVNFVP 983



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 100/168 (59%), Gaps = 3/168 (1%)

Query: 573  EAPGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
            +AP Y   G D LR+WV+S DYT DV+IG QVL+ ++    K R T + LLG L D+R+ 
Sbjct: 1190 QAPVYDALGPDALRMWVASSDYTRDVVIGKQVLQTVNTSLHKYRVTFKLLLGALSDFRLE 1249

Query: 630  NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
            + + YD L  +D+ AL  L + V   +++ E+++F+K    I R+  ++ S FY +  KD
Sbjct: 1250 DRLPYDQLQQVDRIALKHLSDTVLACQKACENFEFYKAVNAINRWANLEFSAFYMEAIKD 1309

Query: 690  RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
            RLYT    S +RR+ QT L      +  V+API P L E+ W++ P A
Sbjct: 1310 RLYTYAENSTSRRAAQTTLFHIYHHLQEVLAPITPLLVEETWEHTPEA 1357


>gi|26331214|dbj|BAC29337.1| unnamed protein product [Mus musculus]
          Length = 1012

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 200/471 (42%), Positives = 278/471 (59%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LPKT+F M+     +   E EI +     +++    ++     F LHDGPPY
Sbjct: 58  GRYRDTVLLPKTSFPMKLLGRQQSDMELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           A G+ H+GHALNKILKDI NR+ +++  KV +VPGWDCHGLPIE KVL  L  DA+  L+
Sbjct: 118 AKGDPHVGHALNKILKDIANRFHMMRGSKVHFVPGWDCHGLPIETKVLSELGVDAQ-SLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FA+A ++ Q ++F R+GV ADWNN Y T DP+YEA Q+ VF QM  +G +
Sbjct: 177 AMEIREKARSFAQAAIEKQKSAFVRWGVMADWNNCYYTFDPKYEAKQLRVFYQMYEKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV+WSPSSRTALAEAELEY   HVSRSIY  F ++  PP    L +   P + + 
Sbjct: 237 YRSYKPVYWSPSSRTALAEAELEYNPEHVSRSIYVRFPLLRPPPKLESLTDASSP-VSVL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN A+    + +YAVV               K S  G++         I+
Sbjct: 296 VWTTQPWTIPANQAICYMPEAKYAVV---------------KCSASGHLY--------IL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A D +  + +   T   +    +G DLE     HP+   +   ++   ++T   GTGLVH
Sbjct: 333 AEDKIAPVASALETTFDVVAAFSGVDLEGGTCSHPLTPDKVSPLLPATHVTMAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD+ G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYSVASQHSLPMDCLVDEGGMFTDAAGPELQNKAVLKEGTDVVIKMLQATKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++ EE   H YP DWRTK P + RA++QWF ++   + AA +++  VK++P
Sbjct: 453 VLKEENIVHSYPCDWRTKTPVLIRASKQWFVNITDIKAAAKESLKTVKFIP 503



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 111/189 (58%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGAD+LR W++  +   +V IGP VL    D   KLR TLR+LLGNL  +    +S+ 
Sbjct: 689 PPYGADILRWWIAESNVFTEVTIGPSVLSAARDDISKLRNTLRFLLGNLTGFNPETDSVP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
             ++ +IDQY L  +++    I +SY+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 749 VKNMYVIDQYMLHLIQDFATKITDSYKQYDFGKVVRLLKAFYTRELSSFYFSIVKDRLYC 808

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L+  L  +VR  APILPHLAE+V+Q++P+       +  + VF + 
Sbjct: 809 ENEKDPKRRSCQTALAEILDVLVRAFAPILPHLAEEVFQHIPYV------TEPKSVFRTG 862

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 863 WINTSSIWK 871


>gi|377809541|ref|YP_005004762.1| isoleucine--tRNA ligase [Pediococcus claussenii ATCC BAA-344]
 gi|361056282|gb|AEV95086.1| isoleucine--tRNA ligase [Pediococcus claussenii ATCC BAA-344]
          Length = 929

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 207/471 (43%), Positives = 289/471 (61%), Gaps = 41/471 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V E +   +W +++++ +    N+G+ +FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFKMRGNLPVNEKKREDIWFENKIYEKRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           N+HMGHA+NKI KDII RYK +  ++  YVPGWD HGLPIE    Q L +D   +K ++ 
Sbjct: 62  NIHMGHAMNKISKDIIVRYKSMNGFRSPYVPGWDTHGLPIE----QQLAKDGYDRKKMST 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           S+ R    ++A   V  Q   FKR G+ A+W+NPYLTL PE+EA +I+ FG+M+ QG IY
Sbjct: 118 SEFRKLCREYALKQVDKQREDFKRLGISAEWDNPYLTLMPEFEAEEIKTFGKMAEQGLIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RGKKPV WS SS +A+AEAE+EY +     + YA  +++               D  + V
Sbjct: 178 RGKKPVFWSWSSESAMAEAEVEYHDVTSPSAFYAE-KVIDGKDVLDN-------DTYVVV 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PA+  V ++A   YAVV+     EG+S                      +VA
Sbjct: 230 WTTTPWTIPASEGVTIDANFDYAVVQ----PEGESRK-------------------FVVA 266

Query: 402 SDLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           ++L+ ++  K+G T +   K + GS+L+     HP    +  VV+ G+++T ++GTGLVH
Sbjct: 267 NELLSSVSEKFGWTNVKTIKLVKGSELDRILVQHPFIEDRKLVVMLGNFVTLDAGTGLVH 326

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMS 519
           TAPG G++D+  S +YGL I+ PVDD+G  T EAG  F G+    D N   +  L +   
Sbjct: 327 TAPGFGEDDFWVSKEYGLDIVVPVDDKGVMTAEAGSDFEGV-FYEDANQIALDKLKDLNL 385

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L++E PYEH YP+DWRTKKP IFRAT QWFASV+  R + +DAI  VK+ P
Sbjct: 386 LLLEMPYEHSYPFDWRTKKPVIFRATPQWFASVDKIRDSILDAITDVKFKP 436



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 99/167 (59%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP +     GA+++RLWV S+D + DV +  +   ++SD Y+K+R T+RYLL N  D+  
Sbjct: 607 VPEEIIQKMGAEIIRLWVLSIDSSSDVRVSQENFVKISDSYKKIRNTIRYLLANTSDFDP 666

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + ++  +L   D+Y L +   ++  + +SYE+Y F  +F+ +  F+I DLS FY D A
Sbjct: 667 KEDRVAVSELNTEDKYMLNRFNQVIGELNQSYEAYDFINVFKTLMNFMINDLSAFYLDFA 726

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RRS QTV    L+ + + + P+LPH  E++W+ L
Sbjct: 727 KDVVYIEPAKSLKRRSMQTVFYDILVGLTKWMTPVLPHTTEEIWEYL 773


>gi|121709383|ref|XP_001272405.1| isoleucyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
 gi|119400554|gb|EAW10979.1| isoleucyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
          Length = 1003

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 213/476 (44%), Positives = 282/476 (59%), Gaps = 36/476 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R     +   + +  D+   + R     D   FVLHDGPPYANG L
Sbjct: 12  WSSTLKLPKSTFPARVTPADQTKYLKRCTDELYAWQRRERPAD-RPFVLHDGPPYANGEL 70

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDE--DAKKDLTPSK 223
           H+GHALNKILKDII R +L Q  +VRYVPGWDCHGLPIELK L    E  +    +  + 
Sbjct: 71  HVGHALNKILKDIICRVQLAQGKRVRYVPGWDCHGLPIELKALVQQKELGETGGSIGAAA 130

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
           +R  A K A  TVK QM  F+ +GV ADW   + T+D E+E  Q+ VF +M  +G IYR 
Sbjct: 131 IRKAARKLAGKTVKEQMKGFRSFGVMADWEGHWKTMDKEFEKRQLGVFREMVEKGLIYRR 190

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPS+ TALAEAELEY + HVS +    F +VS PP+ +      + DL   +WT
Sbjct: 191 FKPVYWSPSTGTALAEAELEYKDDHVSTAALVKFPLVSLPPTLAQDPLVQVKDLSAVIWT 250

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PANA +AV+  L+YA+V  QS   G      ++     N+LK+          D
Sbjct: 251 TTPWTLPANAVIAVHESLEYAIV--QSDTHGQLLVAQSRLEYLENLLKE----------D 298

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHP----VDNRQCPVVIGGDYITTESGTGLV 459
           L            VI  ++ GS L +     P    V+    P +I  D++T +SG+GLV
Sbjct: 299 LT-----------VIIPSILGSQLADQTTYRPLFKSVEAEPQP-IIAADFVTADSGSGLV 346

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYL 514
           H APGHG +DY   +  G+P  +PVDD+G+FT++A      + SG  VLGDGN AV++Y+
Sbjct: 347 HCAPGHGMDDYEACVPRGIPAFAPVDDQGRFTDKAMPKDPARLSGKSVLGDGNAAVLEYI 406

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           D +  L+ +  YEHKYPYDWR+K P I RATEQWFA V   R  A+ A+  VK+VP
Sbjct: 407 DSEGFLLAQHQYEHKYPYDWRSKLPIIIRATEQWFADVADIRGRAVRALEDVKFVP 462



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 89/158 (56%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
           G D LR+W +  DYT DV++G QVL+ ++    K R T + LLG L D++  + + Y  L
Sbjct: 676 GPDALRMWAAGSDYTRDVVMGKQVLQTVNTSLHKFRVTFKLLLGALSDFQPSDQLPYGQL 735

Query: 638 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
             +D+ AL  L  +V   R++   ++F+K    + R+  ++ S FY +  KDRLYT G  
Sbjct: 736 QQVDRMALMHLSEMVLACRKACNDFEFYKAVNAMNRWANLEFSAFYMEAIKDRLYTYGEN 795

Query: 698 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           S +RR  QT L      +  V+API P L E+ W++ P
Sbjct: 796 SISRRGAQTTLFHIYQYLQEVLAPITPLLIEETWEHAP 833


>gi|402830017|gb|AFR11458.1| isoleucyl-tRNA-synthetase [Lactobacillus brevis]
          Length = 937

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 290/469 (61%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E +  K W +++++      N+G+  F+LHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFKMRGNLPVKEVDRQKAWAENKMYEARQKLNEGKPTFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
            +HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ ++  +  +K ++ ++
Sbjct: 62  PIHMGHALNKISKDIIVRYKSMSGFRAPYVPGWDTHGLPIEQQLTKAGYD--RKKMSTAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   FKR GV A+W+NPYLTL PE+EAA++ VFG+M+ +G IY+G
Sbjct: 120 FRDLCREYALKQVDQQREGFKRLGVSAEWDNPYLTLKPEFEAAEVRVFGEMAKRGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +A+AEAE+EY +     + Y   ++V       G+L+    D  L VWT
Sbjct: 180 KKPVYWSWSSESAMAEAEVEYHDVTSPSAFYGE-QVVDG----KGVLDT---DTYLVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P +  + ++A ++YAVV+           PAN          D +K   ++A+D
Sbjct: 232 TTPWTIPGSEGITIDAGIEYAVVK-----------PAN----------DDRK--FVLAAD 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV      +G + V + KT+ G DL+N    HP    +  VV+ GD++TTESGTGLVHTA
Sbjct: 269 LVDQNAEMFGWEDVQVIKTVMGQDLDNVTAQHPFIADRKLVVMLGDFVTTESGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D+     Y LP+L PVDD+G  T EAG  F+G+    D N   +  L    +L+
Sbjct: 329 PGLGEDDFNVGALYHLPVLVPVDDKGYMTAEAGADFAGV-FYEDANQIALDKLKAANALL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              PYEH YP+DWRTKKP IFRAT QWFASV+  R   +  +  VK+ P
Sbjct: 388 KYMPYEHSYPFDWRTKKPVIFRATPQWFASVDKIRDEILAQLKDVKFQP 436



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+SVD + DV +  +   ++SD Y+KLR T+RYLL N  D+    ++I+ DD
Sbjct: 616 GADIVRLWVTSVDSSADVRVSTEAFVKISDSYKKLRNTMRYLLANTSDFDPQTDAIAVDD 675

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D++ L+QL    K++R  Y+ Y F  I++ +  F++ DLS FY D AKD LY    
Sbjct: 676 LQPVDRHMLYQLNEFTKSVRAHYDHYDFLNIYKELINFVVSDLSAFYLDFAKDILYIEAA 735

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RRS QTV     +S+ ++I PILPH AE++W  L
Sbjct: 736 DSPIRRSMQTVFYQIAVSLTKLITPILPHTAEEIWDFL 773


>gi|187734702|ref|YP_001876814.1| isoleucyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187424754|gb|ACD04033.1| isoleucyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 909

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 197/529 (37%), Positives = 296/529 (55%), Gaps = 58/529 (10%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN---FVLHDGPP 159
           E  YK T+ LP+T F MR +    EP   K W+D  ++ R+  +   +    F+LHDGPP
Sbjct: 5   EKNYKDTILLPETGFPMRGDLTKNEPVRLKKWEDTGLYERILSRRMAQGAPRFLLHDGPP 64

Query: 160 YANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDL 219
           +ANG++HMG ALNKILKD++ + K +  Y   Y+PGWDCHGLPIE KV+Q       +DL
Sbjct: 65  FANGDVHMGTALNKILKDLVLKSKTMAGYAAPYIPGWDCHGLPIEFKVVQK-----ARDL 119

Query: 220 TPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGY 279
             +++R + A+FAK  +  Q  SF+R GV+ DW NPYLT+ P YEA  + VF ++   G 
Sbjct: 120 DAAEIRRRCAEFAKGFIDIQRTSFRRLGVFGDWENPYLTMKPAYEANILRVFAKLVEDGA 179

Query: 280 IYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGL 339
           +Y+ +KPV WS  + TALAEAE++Y E  VS S++  F ++  P               +
Sbjct: 180 VYQSRKPVQWSYGAYTALAEAEIDYKE-KVSSSVFVRFPLLDNPLGLKA---------SM 229

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN  +A++ +  Y                       G  +K+ +   +I
Sbjct: 230 VIWTTTPWTLPANVGLALHPRFTYVA---------------------GRFMKNGQTENLI 268

Query: 400 VASDLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +  DL+     K G  L    +   G++LENC   HP  +R   +++  D++TT++GTG+
Sbjct: 269 IVKDLLDAFAQKTGWALAETIREFKGAELENCEARHPFLSRTSTIIL-ADFVTTDTGTGI 327

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG--KFSGLDVLGDGNVAVVKYLDE 516
           VH APGHG +DY    +YGLP+LSPVDD+GK+TEE G     G  V  D N  ++  L++
Sbjct: 328 VHIAPGHGADDYNVGRQYGLPVLSPVDDDGKYTEEVGVPSLVGKHVF-DANKDIISMLEQ 386

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP----- 571
             +L   E Y H+YP+ WR+K P IFRA EQ+F S++  R  A++ I +V+W+P      
Sbjct: 387 GNNLFGVEEYRHQYPHCWRSKTPIIFRAVEQFFISMDKLRPQALEEIDKVQWLPAWGRNR 446

Query: 572 -----QEAPGYGADVLRLWVSSV----DYTGDVMIGPQVLRQMSDIYRK 611
                +  P +     R W   +    D  G  ++   ++R+++D+  K
Sbjct: 447 IYGTVEARPDWCISRQRTWGVPLPVFFDENGKAVLDAALVRKIADMVEK 495



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 110/185 (59%), Gaps = 6/185 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD++RLW +SVD+  +V  G  + +Q+++ YR+LR TLR LLGN+  +     +++ +
Sbjct: 618 YGADIVRLWAASVDWQNEVPFGEDLFKQVTEPYRRLRNTLRILLGNISGFDFAAQAVAPE 677

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
            +P++D++ L +L  +++   ++YE+Y F K F  I +F   DLS  Y D  KDRLY   
Sbjct: 678 HMPILDRWILERLNAVIRETLKAYEAYDFRKAFSAINQFCTSDLSALYVDTTKDRLYCDA 737

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
           ++S  RR+ QT ++    ++ R++APIL   A++ W+     Y   +GS  E  F +  P
Sbjct: 738 SSSVRRRATQTAMTIIFKALCRLLAPILAFTADEAWE-----YAGYEGSVHEQDFPAPMP 792

Query: 756 VLDEK 760
             D +
Sbjct: 793 EYDTQ 797


>gi|339445028|ref|YP_004711032.1| isoleucyl-tRNA synthetase [Eggerthella sp. YY7918]
 gi|338904780|dbj|BAK44631.1| isoleucyl-tRNA synthetase [Eggerthella sp. YY7918]
          Length = 950

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 202/482 (41%), Positives = 287/482 (59%), Gaps = 29/482 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T++LPKT F MRAN    EP+    W++ +++ RV +KN DG+ FVLHDGPPYANG 
Sbjct: 5   YKETMNLPKTDFAMRANLPENEPKRLAKWEEERIYERVLEKNKDGKPFVLHDGPPYANGP 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA NKILKD +N+    + Y   YVPGWDCHG PIE  V ++L  +    +    L
Sbjct: 65  IHIGHAFNKILKDFVNKSHAQRGYFTPYVPGWDCHGQPIEHMVEKTLGPEKMAKIDQPTL 124

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A+  +  Q   FKR GV  DW +PYLT  P YEA  +EVF +M L G +YRG+
Sbjct: 125 RRLCREWAEKYIDIQRDGFKRLGVNGDWEHPYLTFTPNYEAGNVEVFKKMYLDGSVYRGR 184

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPP--STSGLLNEFLPDLGLAVW 342
           KP+HW     TALAEAE+EY +   S SI+  F++ + P    T+G+      D  + +W
Sbjct: 185 KPIHWCKRCHTALAEAEIEYSD-ETSPSIFVKFKLDTVPGMFETAGVTG----DAYILIW 239

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN AV++     Y +V+     +G +   A +           ++V  I   
Sbjct: 240 TTTPWTLPANTAVSLAPDADYVMVQA----DGSNMIMARELV---------EQVAEIAGW 286

Query: 403 DLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           +    +E   GT + +K    G +L    Y  PV       +I GD++T ++GTG VHTA
Sbjct: 287 EDWSLVEEATGTLVSLK----GRELTGLTYTCPVRQDLKGTIIYGDHVTLDTGTGCVHTA 342

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHGQ+DY+ +L++ +P+L PVDD G FT+EAG FSGLDV  + N  ++ +L E+ +L+ 
Sbjct: 343 PGHGQDDYLVALEFDVPLLMPVDDNGCFTDEAGPFSGLDV-DEANPVIINWLRERGTLVA 401

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVPPQEAPGYGA 579
           E+   H YP+ WR  +P IFRAT+QWF S++    R+ A+ AI   V+W+P   A   G+
Sbjct: 402 EKSILHSYPHCWRCHEPVIFRATDQWFVSMDKNSLREDALSAIENDVEWIPAWAANRIGS 461

Query: 580 DV 581
            V
Sbjct: 462 MV 463



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/190 (37%), Positives = 115/190 (60%), Gaps = 3/190 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSI--SYD 635
           GADVLRLWV+SVDY+ DV I  ++L++ S+ YR++R T R+LLG+L D+     +   +D
Sbjct: 635 GADVLRLWVASVDYSQDVSISDEILQRTSEAYRRIRNTFRFLLGSLDDFDDATDMVEDFD 694

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  +DQ+ L +L +++ ++  +Y  Y+F  +++ +  +I+ DLS  Y D  KDRLY+  
Sbjct: 695 ELEPMDQWMLVRLSHLLADVEAAYNDYKFHLVYRAVYDYIVNDLSAVYMDATKDRLYSEA 754

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             S  RR+ QTVL   L  +VRV+AP+L    ++VW++ P A    +G        + WP
Sbjct: 755 PDSPRRRAVQTVLMDILEVLVRVLAPVLSFTTDEVWEHYPQAIREREGRPTNVQL-AGWP 813

Query: 756 VLDEKWRTFP 765
            L +   T P
Sbjct: 814 TLRDFVPTLP 823


>gi|227509388|ref|ZP_03939437.1| isoleucyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227191100|gb|EEI71167.1| isoleucyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 942

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 202/469 (43%), Positives = 291/469 (62%), Gaps = 36/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E E  K W++++V+ +    N+G+ +FVLHDGPPYANG
Sbjct: 9   RVKDTLNLGKTKFKMRGNLPVKEVERQKAWEENRVYEQRQKLNEGKPSFVLHDGPPYANG 68

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHA+NKI KDII RYK +  Y+  YVPGWD HGLPIE K+ Q+  +  +K ++ + 
Sbjct: 69  DIHMGHAMNKISKDIIVRYKSMTGYRAPYVPGWDTHGLPIEQKLTQAGYD--RKKMSTND 126

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V+ QM  FKR GV  DW++PYLTL  E+EAA++ VFG  + +G IY+G
Sbjct: 127 FRKLCQEYAMKQVQRQMDEFKRLGVSGDWDHPYLTLQHEFEAAEVRVFGAFAKRGLIYKG 186

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY +     + Y   +++       G+L +   +  + VWT
Sbjct: 187 KKPVYWSWSSESALAEAEVEYHDVTSPSAFYGE-KVIDG----KGVLED--DNTFMVVWT 239

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + V+A   YAVV+ +                      D++K   ++AS+
Sbjct: 240 TTPWTIPASEGITVDADFDYAVVQPED---------------------DERK--FVIASE 276

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+   E  +G K V I KT+ G D+E     HP D+ +  + + GD++T ++GTGLVHTA
Sbjct: 277 LLEKDEGLFGWKNVKIVKTVKGRDMEGILAEHPFDHSRKLLTMLGDFVTLDAGTGLVHTA 336

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++D+    KYGL I +PVDD G  T+E+G+ F+G+    D N   +  L +   L+
Sbjct: 337 PGYGEDDFNIGRKYGLDIFAPVDDRGYLTKESGEDFAGV-FYEDANKIALDKLKKAGLLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              P  H YP+DWRTKKP IFRAT QWFASV+  +   ++AI  V + P
Sbjct: 396 DYMPLNHSYPFDWRTKKPIIFRATPQWFASVDKIKDDILNAIEDVTFYP 444



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 95/155 (61%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+SVD + DV +  +   ++SD Y+K+R T+R+LL N  D+    N++++D+
Sbjct: 624 GAEIVRLWVTSVDTSADVRVSQENFVKISDAYKKIRNTMRFLLANTSDFDPKTNAVAFDE 683

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +   DQY    L   +   R+S+E Y F   ++    F+  DLS FY D+AKD +Y    
Sbjct: 684 MESQDQYMTVLLNKFLGEARDSFEQYDFLTFYKKFLNFVTTDLSAFYLDMAKDIVYIDKK 743

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
               RRS QTV+   + ++ +++ P+LPH AE++W
Sbjct: 744 DGHKRRSMQTVMYHAVTTLTKLMTPVLPHTAEEIW 778


>gi|377831352|ref|ZP_09814329.1| isoleucyl-tRNA synthetase [Lactobacillus mucosae LM1]
 gi|377554779|gb|EHT16481.1| isoleucyl-tRNA synthetase [Lactobacillus mucosae LM1]
          Length = 931

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 202/469 (43%), Positives = 291/469 (62%), Gaps = 38/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T+++ KT F MR      E +  KLW+D++V+ +    N G+  F+LHDGPPYANG
Sbjct: 2   RVKDTLNIGKTKFPMRGRLPETEAQREKLWEDNKVYEQRQKLNQGKPTFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHA+NKI KD I RYK +  ++  YVPGWD HGLPIE + L  +  D KK ++ ++
Sbjct: 62  NIHIGHAMNKISKDFIVRYKSMAGFRAPYVPGWDTHGLPIEHQ-LTKMGYDRKK-MSTTE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    KFA   V  Q   FKR GV  +W+NPYLTL  E+EA QI+VFG  + +G +Y+ 
Sbjct: 120 FRDLCRKFALEQVDKQRTDFKRLGVSGEWDNPYLTLAKEFEAQQIKVFGAFAKKGLLYQA 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY +  V+++ Y   +++       G L+    D  L  WT
Sbjct: 180 KKPVYWSWSSESALAEAEVEYHDV-VAKTAYFCEQVIDG----KGRLDN---DTYLVGWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+ AVAVN K+ YAVV+           PAN          D +K   ++A +
Sbjct: 232 TTPWTIPASEAVAVNPKIIYAVVK-----------PAN----------DDRK--FVIADE 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV     K+G  +  +   L+G D++     HP ++++  +V+ GD++T E+GTGLVHTA
Sbjct: 269 LVAKCAEKFGWDEYEVVDRLSGQDMDRMTSKHPYNDKEM-LVVNGDHVTLEAGTGLVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G +DY    KYGLPI +P++D+G  T E G +F G+    D +   +  L +  +L+
Sbjct: 328 PGYGDDDYQVGKKYGLPIFAPMNDQGVLTAENGPEFDGV-FYQDADDISLDLLKKHHALL 386

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +EP EH YP+DWRTKKP +FRAT+QWF S++  R   ++A+ +VK+ P
Sbjct: 387 KQEPLEHSYPFDWRTKKPIVFRATDQWFVSIDKMRDEILNAVDEVKYYP 435



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 100/164 (60%), Gaps = 1/164 (0%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +     GA+++RLWV S D + DV +     +Q+SD YRKLR T R+LL N  D+   
Sbjct: 607 PNKVVKQMGAEIIRLWVMSADTSADVRVSMDTFKQISDAYRKLRNTFRFLLANTADFDAN 666

Query: 630 N-SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
           + ++SY+ L  +DQY + +L   +K +R+ ++ Y F   ++ +  F+  DLS FY +VAK
Sbjct: 667 DDTVSYEKLESVDQYMVVKLNRFLKEMRDLFDEYDFMTAYKKLINFVNNDLSAFYMNVAK 726

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQ 732
           D LY     S  RRS QTV    L+++V+++ PILPH  E+VW+
Sbjct: 727 DVLYVEAKDSHARRSMQTVFYDILVTLVKLLTPILPHTTEEVWE 770


>gi|432940699|ref|XP_004082722.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial-like [Oryzias
           latipes]
          Length = 1007

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 204/470 (43%), Positives = 282/470 (60%), Gaps = 34/470 (7%)

Query: 106 YKHTVDLPKTTFGMR--ANALV-REPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYAN 162
           Y+ +V LP+T F M+    ALV RE +I +  D  +++    ++   + F LHDGPPYAN
Sbjct: 54  YRDSVLLPRTEFPMKLVGRALVEREVQIQQECDFAELYSWQRERKAKKKFSLHDGPPYAN 113

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G  H+GHALNKILKDI NR+++L+  +V YVPGWDCHGLPIELK L  L       LTP 
Sbjct: 114 GAPHVGHALNKILKDIRNRFEVLRGRQVHYVPGWDCHGLPIELKALGGL---CASGLTPL 170

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           ++R +A +FA+  +  Q A+F+R+GV ADW   Y T D  YEAAQ++VF +M  +G +Y+
Sbjct: 171 QIRQRAREFAEGAIAQQKAAFQRWGVMADWEQCYYTFDGPYEAAQLKVFQEMYSKGLVYQ 230

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
             KPV WSPSSRTALAEAELEY   HVSR++YA F + + PP       E L D+ L VW
Sbjct: 231 DYKPVFWSPSSRTALAEAELEYNPEHVSRAVYATFALTTPPPGLPA--EEGLDDVSLLVW 288

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TT PWT+PAN AV      +Y+VV+                       +      ++VA+
Sbjct: 289 TTQPWTLPANQAVCYMPNAEYSVVK-----------------------RADTSQLLLVAA 325

Query: 403 DLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVD-NRQCPVVIGGDYITTESGTGLVHT 461
           +    L A  GT+L    T  GS LE     HP++   Q P ++  +++T   GTGLVHT
Sbjct: 326 ERAAGLAALLGTELRSVSTFTGSQLEGGMCTHPMNPGVQVP-LLPANHVTMAKGTGLVHT 384

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSL 520
           AP HG EDY  + ++ LP+   VDD+G+FTE AG +  GL VL +G   V+  L E  +L
Sbjct: 385 APAHGMEDYSVASQFKLPVDCMVDDDGRFTELAGPQLQGLSVLTEGTEKVISMLRENGAL 444

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++E+   H YPYDWRTK+P + R ++QWF +    R  A + + +V+ +P
Sbjct: 445 VLEQQCVHSYPYDWRTKQPVLIRPSKQWFINTLSLRDKAKEVLQKVQVLP 494



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 94/164 (57%), Gaps = 3/164 (1%)

Query: 574 APGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH--DWRVGNS 631
           AP YGADVLR WV+  +   ++ IG   L    D   KLR TLR+LLGNL   D R   S
Sbjct: 678 APAYGADVLRWWVAESNIFSELQIGSNALNSARDSISKLRNTLRFLLGNLQGFDPRT-QS 736

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
           +    +  +DQY L  L      + ++Y  +   ++ +++Q F+  DLS+FYF + KDRL
Sbjct: 737 VDAKRMHYVDQYMLHLLRQFSMKVTDAYSEFDASRVIRLLQAFVTRDLSSFYFSIIKDRL 796

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           Y     S  RRSCQT L   L  + R +APILPHLAE+V+Q  P
Sbjct: 797 YCDPEDSPGRRSCQTALEEILDGVTRSVAPILPHLAEEVYQLAP 840


>gi|296230059|ref|XP_002760545.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Callithrix
           jacchus]
          Length = 1009

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 200/471 (42%), Positives = 281/471 (59%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           G Y+ TV LP+TTF M+     +   E EI +     +++    ++     F LHDGPPY
Sbjct: 58  GSYRDTVLLPQTTFPMKLLGRQQPDTELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ ++   K+ +VPGWDCHGLPIE+KVL  L  +A+ +L+
Sbjct: 118 ANGDPHVGHALNKILKDIANRFHMMTGSKIHFVPGWDCHGLPIEVKVLSELGGEAQ-NLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FAKA ++ Q  +F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +
Sbjct: 177 AIEIREKARSFAKAAIEKQKLAFIRWGIMADWNNCYFTFDGKYEAKQLRNFYQMYEKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++      + L++   P +   
Sbjct: 237 YRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSSKLASLIDSSSP-VSFL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN AV    + +YAVV               K S+ G+        F I+
Sbjct: 296 VWTTQPWTIPANQAVCYMPESKYAVV---------------KCSKSGD--------FYIL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A+D V ++ +   T      T +G DLEN    HP+   +   ++  +++T   GTGLVH
Sbjct: 333 AADKVASVASALETTFETISTFSGVDLENGTCRHPLIPDKASPLLPANHVTMAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   V+++G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYSVASQHNLPMDCLVNEDGIFTDVAGPELQNKAVLEEGTDVVIKMLQTAKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ EE   H YPYDWRTKKP + RA++QWF ++   +  A + + +VK++P
Sbjct: 453 LLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIKTTAKELLKKVKFIP 503



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/189 (45%), Positives = 111/189 (58%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 686 PPYGADVLRWWVAESNVFTEVTIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 745

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I E Y+ Y F K+ +++Q F   +LSNFYF V KDRLY 
Sbjct: 746 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLQTFYTRELSNFYFSVIKDRLYC 805

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L   L  IVR  APILPHLAE+ +Q++P  Y  E  S    VF + 
Sbjct: 806 EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEAFQHIP--YITEPKS----VFRTG 859

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 860 WISTSSIWK 868


>gi|342218617|ref|ZP_08711227.1| isoleucine--tRNA ligase [Megasphaera sp. UPII 135-E]
 gi|341589487|gb|EGS32762.1| isoleucine--tRNA ligase [Megasphaera sp. UPII 135-E]
          Length = 931

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 195/472 (41%), Positives = 284/472 (60%), Gaps = 39/472 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFL-RVADKNDGENFVLHDGPPYANGN 164
           Y  T+ LP+T F MR N   REPE    W DH ++  R+  + +G  F+LHDGPPYANG 
Sbjct: 3   YGKTLHLPETEFPMRGNLPKREPEFLAFWQDHDIYHKRLEQRKNGPKFILHDGPPYANGK 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHALNK+LKDI+ +YK  + +  +YVPGWD HGLPIE  V+++   + + ++TP  L
Sbjct: 63  LHIGHALNKVLKDIVLKYKTQRGFYTKYVPGWDTHGLPIEHAVIKNTGLN-RHEMTPLAL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   +A   +  Q   F R+GV  DW NPYLTL    E  QI VFG+M+ +G+IY+G 
Sbjct: 122 RKKCHDYAMEQMNLQRQEFIRFGVLGDWENPYLTLQHHIEVEQIGVFGKMAKKGHIYKGM 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMV---SAPPSTSGLLNEFLPDLGLAV 341
           K V+W P   TALAEAE+EY +   S S++  F+ V   +A P  + L N +       +
Sbjct: 182 KTVYWCPHCETALAEAEIEYKDDK-SFSLFVKFQAVQVGTALPKGADLKNVY-----ALI 235

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N A++ NA   Y  V I     G+             +L  Q +V +++ 
Sbjct: 236 WTTTPWTIPCNLAISANAAFTYVWVRI-----GEEY-----------LLMAQDRVAVVME 279

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +  +   E       V+ +TL G D+++  + HP+  R  P+++ G+++T ++GTGLVHT
Sbjct: 280 AAHITDYE-------VLPETLTGEDIKSFVFRHPLYERNSPILL-GEHVTLDAGTGLVHT 331

Query: 462 APGHGQEDYVTSLKYGLPILSP---VDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQM 518
           AP HGQ+D+    + G P L P   VD  G++T +  ++ G+ V  D NV V+K L    
Sbjct: 332 APDHGQDDFDVCKQSGKPELQPLGTVDSSGRYTNKVPRYEGVFVF-DNNVPVIKDLAAVN 390

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +L  +E + H+YP+ WR K+P I+RATEQWF+SV+G+RQ A+ AI  V+W+P
Sbjct: 391 ALFAKETFRHQYPHCWRCKEPIIYRATEQWFSSVDGYRQEALQAIDNVQWIP 442



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/207 (42%), Positives = 134/207 (64%), Gaps = 9/207 (4%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    ++G    V PQE    YGADV+RLWVSS DY GD+ + P++L+Q+SD+Y
Sbjct: 597 TVDGEGRKMSKSVGNT--VAPQEVIEKYGADVMRLWVSSADYQGDIRLSPKILKQLSDVY 654

Query: 610 RKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           RK+R T RYLLG+L D+    ++++YD L  +D++AL +LE +++++ ESYE+YQF  ++
Sbjct: 655 RKIRNTFRYLLGSLADFDPQRDAVAYDQLTDLDKWALMRLEEVIESVTESYETYQFHVMY 714

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
             I  F  +DLS  Y D+ KDRLYT    +  RRS QTV+   L+++V++ AP+L   AE
Sbjct: 715 HTIHNFCTIDLSAVYLDIIKDRLYTEKQDALLRRSAQTVMYEVLMTLVKITAPVLSFTAE 774

Query: 729 DVWQNLPFAYTLEDGSAAEFVFESKWP 755
           +VWQ +P  +        E V  + WP
Sbjct: 775 EVWQFMPVGF-----KDKESVHLTDWP 796


>gi|395531401|ref|XP_003767767.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Sarcophilus
           harrisii]
          Length = 998

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 195/469 (41%), Positives = 281/469 (59%), Gaps = 29/469 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYAN 162
           ++ TV LPKT+  M+     +   E EI +     +++     +N  ENF LHDGPPYAN
Sbjct: 52  HRQTVLLPKTSMPMKLVGRQQTDMELEIQQKCGFSKLYSWQEKRNVRENFCLHDGPPYAN 111

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G  H+GHALNKILKDI NR+++++  KV +VPGWDCHGLPIELK L  L E A+ +L+P 
Sbjct: 112 GEAHVGHALNKILKDITNRFQMMRGAKVHFVPGWDCHGLPIELKALSELGEKAQ-NLSPM 170

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           ++R  A  FA+A ++ Q ++F R+G+ ADW+N Y T D +YEA Q+++F QM  +  IYR
Sbjct: 171 EIRKTARAFAEAAIEKQKSAFIRWGIMADWDNCYYTFDKKYEAQQLKMFYQMYTKDLIYR 230

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
             KPV WSPS+RTALAEAELEY   HVS SIYA F ++  PP  + +L    P +   +W
Sbjct: 231 AYKPVFWSPSARTALAEAELEYNPKHVSHSIYAKFPLLKPPPLLASVLEGSSP-VSAIIW 289

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TT PWT+PAN AV    +  Y++V+  +  E                       F I+A+
Sbjct: 290 TTQPWTIPANQAVCYMPESNYSIVKCTNSGE-----------------------FYILAA 326

Query: 403 DLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           + V ++    GT+  +  T  G+DLEN   VHP+   +   ++   ++    GTG+VH A
Sbjct: 327 EKVSSVATVLGTEFEVISTFLGADLENGSCVHPIIADRVSPLLPAQHVNLSKGTGMVHIA 386

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           P HG EDY+ + ++ LP+   VD++G FTE AG +    + L +G   V+K L    +L+
Sbjct: 387 PAHGMEDYIVASRHELPMDCLVDEDGNFTEAAGSELENKNALEEGTDTVIKMLQSTKNLL 446

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            EE   H YPYDWRTKKP I R+++QWF  +      A +++ +VK++P
Sbjct: 447 KEEDITHSYPYDWRTKKPVIIRSSKQWFVKIGNMTATAKESLKKVKFIP 495



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 111/189 (58%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P YGAD+LR WV+      +V IG ++L    D   KLR TLR+LLGNL D+    +S+ 
Sbjct: 679 PPYGADILRWWVAESHIFSEVKIGSRILNAARDNIDKLRNTLRFLLGNLADFNPKTDSVP 738

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
           ++++ +IDQY L  L++  K + ++Y  Y F K+ + +Q F    LSNFYF + KDRLY 
Sbjct: 739 FEEMYIIDQYMLHLLQDFGKKVTDAYRQYDFGKVIRHLQAFYPSQLSNFYFSIIKDRLYC 798

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L+  L  +VR IAPILPHLAE+V+Q++P+          + VF S 
Sbjct: 799 EKENDLKRRSCQTALAEILDVMVRAIAPILPHLAEEVFQHIPYE------KEPKSVFRSG 852

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 853 WITTSTLWK 861


>gi|259503041|ref|ZP_05745943.1| isoleucine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259168907|gb|EEW53402.1| isoleucine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 931

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 203/469 (43%), Positives = 290/469 (61%), Gaps = 38/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L +T F MR    V E +  +LW++++V+      N+G+ +FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGRTKFPMRGKLPVTEAQREQLWEENKVYQLRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHA+NKI KD I RYK +  Y+  YVPGWD HGLPIE ++ +S  +  +K ++ S+
Sbjct: 62  NIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQLTKSGYD--RKKMSTSE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    K+A   V  Q   FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ 
Sbjct: 120 FRDLCRKYALEQVDKQRTDFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQA 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY +     + +A            G L++   +  L VWT
Sbjct: 180 KKPVYWSWSSESALAEAEVEYHDVVAKTAFFA-----EQVKDGKGRLDD---NTYLVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWTVPA+ AVAVNAK  Y+VV+           PAN   +             +VA+D
Sbjct: 232 TTPWTVPASEAVAVNAKFDYSVVK-----------PANDDRQ------------FVVATD 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  +  K G     +    +G+ L+     HP  +R   +V   DY+T ++GTGLVHTA
Sbjct: 269 LLDGVADKLGWEDFEVVDHFSGAALDGMVTKHPYLDRDI-LVGTADYVTADAGTGLVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G +DY   L++ LPI +P++D+G  ++E G  F+G+    D +   +K L+E  SL+
Sbjct: 328 PGYGDDDYHFGLEHNLPIFAPINDQGVLSKENGADFAGV-FYQDADDISLKKLEETGSLL 386

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +EEP +H YP+DWRTKKP IFRAT+QWF S++  RQ  +DA+  VK+ P
Sbjct: 387 LEEPLKHSYPFDWRTKKPIIFRATDQWFVSIDKMRQDILDALEDVKYQP 435



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/156 (41%), Positives = 102/156 (65%), Gaps = 1/156 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D++   +++SY+ 
Sbjct: 615 GAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFKPTDDTVSYEK 674

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY L +L + +K +R  +++Y F   ++++  F+  DLS FY ++AKD LY    
Sbjct: 675 LNSVDQYMLVKLNHFLKQMRADFDNYDFLDAYKLLINFVNNDLSAFYMNLAKDVLYIEPA 734

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQ 732
            S  RRS QTV    LL++V+++ PILPH AE+VW+
Sbjct: 735 DSHARRSMQTVFYNILLTMVKLLTPILPHTAEEVWE 770


>gi|366088730|ref|ZP_09455203.1| isoleucyl-tRNA synthetase [Lactobacillus acidipiscis KCTC 13900]
          Length = 932

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 204/469 (43%), Positives = 290/469 (61%), Gaps = 36/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  VRE E  + W++++++ +    N+G+ +FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFPMRGNLPVREVERQQEWEENKIYEKRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII R K +  ++  YVPGWD HGLPIE ++ ++  +  +K ++ + 
Sbjct: 62  NIHMGHALNKISKDIIVRSKSMMGFRAPYVPGWDTHGLPIEQQLKKAGVD--RKSMSVND 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A   V  Q   FKR GV A+WN PY++LDP +EA +I VFG+M+ +G IY+G
Sbjct: 120 FREKCREYALKQVDKQRKDFKRLGVAAEWNRPYVSLDPSFEAHEIRVFGKMAEKGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +ALAEAE+EY +     + Y   +++       G+L+E   +  + VWT
Sbjct: 180 KKPVFWSWSSESALAEAEVEYHDVTSPSAFYGE-KVIDG----RGVLDE--DETYMVVWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P +  + ++A   YAVV+ +                      D+KK   ++A++
Sbjct: 233 TTPWTIPGSEGITIDAGFDYAVVQPEG---------------------DEKKY--VLAAE 269

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV      +G  K+ + KT+ GS+LEN    HP    +  V + GD++T ++GTGLVHTA
Sbjct: 270 LVDQNAELFGWQKVQVLKTVKGSELENVLTEHPFYPERKLVTMLGDFVTLDAGTGLVHTA 329

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D+    +YGL I+ PVDD+G  T EAG  F G+    D N   +  L++   L+
Sbjct: 330 PGFGEDDFNVGQQYGLDIVVPVDDKGYLTAEAGPDFEGV-FYDDANQISLDKLEKAGLLL 388

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E  YEH YP+DWRTKKP IFRAT QWFASV+  RQ  +D I  VK+ P
Sbjct: 389 REMDYEHSYPFDWRTKKPIIFRATPQWFASVDKIRQQILDQIDGVKFFP 437



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 109/191 (57%), Gaps = 9/191 (4%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GA+++RLWVSSVD + DV +     +Q+S+ YRK+R T+R+LL N  D+  
Sbjct: 608 VPEKVIKQMGAEIIRLWVSSVDSSADVRVSMGSFQQISESYRKIRNTIRFLLANTTDFDP 667

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + + Y +L  ID+Y   ++ +  K++ + Y  Y F  I++ +  FI +DLS FY DVA
Sbjct: 668 ETDQVPYQELESIDKYMQVRINHFTKDVLDDYAKYDFMNIYKRLINFITIDLSAFYLDVA 727

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD +Y     S  RRS QTVL    + + +++ PI+PH  E++W+ L            E
Sbjct: 728 KDIVYIEAADSHKRRSMQTVLYDVAVRLTKLLTPIIPHTTEEIWKYLK--------EPEE 779

Query: 748 FVFESKWPVLD 758
           FV  ++ P +D
Sbjct: 780 FVQLAEMPAVD 790


>gi|70982524|ref|XP_746790.1| isoleucyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66844414|gb|EAL84752.1| isoleucyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
 gi|159122969|gb|EDP48089.1| isoleucyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
          Length = 1009

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 209/477 (43%), Positives = 281/477 (58%), Gaps = 38/477 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R     +   + +  D+   + R     D   FVLHDGPPYANG+L
Sbjct: 12  WSSTLKLPKSTFPARVTPADQTKYLQRCTDELYAWQRRERPAD-RPFVLHDGPPYANGDL 70

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDE--DAKKDLTPSK 223
           H+GHALNKILKDII R +L +  +VRYVPGWDCHGLPIELK L    E  +    +  + 
Sbjct: 71  HIGHALNKILKDIICRVQLAKGKRVRYVPGWDCHGLPIELKALDLQKELGNTGGSIGAAA 130

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
           +R  A K A  TVK QM  F+ +GV ADW+  + T+D E+E  Q+ VF +M  +G IYR 
Sbjct: 131 IRRAARKLAGRTVKEQMKGFRSFGVMADWDGHWKTMDKEFEKRQLGVFREMVDKGLIYRR 190

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPS+ TALAEAELEY + HVS +    F +VS PP  +      L DL   +WT
Sbjct: 191 FKPVYWSPSTGTALAEAELEYKDDHVSTAALVRFPLVSVPPQLAQDPLVQLKDLSAVIWT 250

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PANA +AV+  L Y +V  QS   G                       +++A  
Sbjct: 251 TTPWTLPANAVIAVHGSLDYMIV--QSDTHGQ----------------------LLIAQS 286

Query: 404 LVPTLEAKWGTKL-VIKKTLAGSDLENCRYVHPV----DNRQCPVVIGGDYITTESGTGL 458
            +  LE      L VI  ++ GS+L +     P+    D    P +I  D++T +SG+GL
Sbjct: 287 RLEYLEHMLKEDLTVIIPSIRGSELADQTKYRPLFKSADAEPQP-IIAADFVTADSGSGL 345

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKY 513
           VH APGHG +DY   +  G+P  +PVDD G+FT++A      + SG  VLG+G VAV++Y
Sbjct: 346 VHCAPGHGMDDYEACVPRGIPAFAPVDDHGRFTDKAMPSDPTRLSGKSVLGEGTVAVLEY 405

Query: 514 LDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++ Q  L+ +  YEHKYPYDWR+K P I RATEQWFA V   R +A+ A+  V++VP
Sbjct: 406 IESQGYLLAKHEYEHKYPYDWRSKLPIIIRATEQWFADVADIRDSAVKALEDVRFVP 462



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 97/164 (59%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
           G D LR+WV+S DYT DV+IG QVL+ ++    K R T + LLG L D+R  + + Y  L
Sbjct: 674 GPDALRMWVASSDYTRDVVIGKQVLQTVNTSLHKFRVTFKLLLGALSDFRPQDQLPYSQL 733

Query: 638 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
             +D+ AL  L  +V   +++ E+++F+K    + R+  +  S FY +  KDRLYT G +
Sbjct: 734 QQVDRMALLHLSEMVLTCQKACENFEFYKAVNAMNRWANLQFSAFYMEAIKDRLYTYGES 793

Query: 698 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLE 741
           S +RR+ QT L      +  ++API P L E+ W++ P A  L+
Sbjct: 794 STSRRAAQTTLFHIYNYLQEILAPITPLLVEETWEHTPEAIKLQ 837


>gi|366086109|ref|ZP_09452594.1| isoleucyl-tRNA synthetase [Lactobacillus zeae KCTC 3804]
          Length = 928

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 202/468 (43%), Positives = 281/468 (60%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ KTTF MRA     EP   K WD+  V+ +    N+G+  F+LHDGPP+ANG
Sbjct: 2   KIKDTLNMGKTTFPMRAGLPKNEPVWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K+++ + 
Sbjct: 62  NIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVK--RKEMSMTD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA   +  Q   FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G
Sbjct: 120 YRELCRQFAMKEIDKQRTDFKRLGVMGDWEHPYITLHHAYEASEIRVFGAMAKKGYIYHG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS + LAEAE+EY +   S SIY  F +V       GLL++   D  L +WT
Sbjct: 180 LKPVYWSWSSESTLAEAEIEYHDDK-SPSIYVAFPVVDG----KGLLDQ---DTSLVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +AVN +  Y  V++     GD                       +VA++
Sbjct: 232 TTPWTIPANYGIAVNPRFDYVQVQV-----GDHK--------------------YVVAAE 266

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  +  + G  +  I KT  G+ ++     HP+ +R   +V+  D++T ++GTGLVHTA
Sbjct: 267 LLDRVAEEIGWDQPKILKTFKGTAMDKMTAKHPLYDRTS-LVMEADHVTLDAGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY   +KYGLP++S VD +G   E A  F G+    D N  + K L E+ +L+ 
Sbjct: 326 PGHGEDDYKVGMKYGLPVISVVDAKGYMNENAPGFEGV-FYDDANKLITKALTEKGALLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            + + H YP+DWRTKKP IFRAT QWFASVE FR   + AI  V + P
Sbjct: 385 LDFFTHSYPHDWRTKKPVIFRATTQWFASVEAFRDQILKAIDTVDFKP 432



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 103/167 (61%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R TLR+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTLRFMVANTGDFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++I+YDDL  +D+Y + +L  ++  ++ +Y+ Y F  + + I  F++ DLS FY DVA
Sbjct: 663 QKDAIAYDDLGSVDRYLMVRLNQVIAKVKAAYDVYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y        RRS QTV+   LL + +++ PILPH AE+VW  L
Sbjct: 723 KDVVYIEAQNDPKRRSMQTVMYTALLDLTKLLTPILPHTAEEVWPYL 769


>gi|313673045|ref|YP_004051156.1| isoleucyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939801|gb|ADR18993.1| Isoleucyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 931

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 203/525 (38%), Positives = 305/525 (58%), Gaps = 43/525 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVAD-KNDGENFVLHDGPPYANGN 164
           YK++++LPKT + M+ N   +EP+  K W+++ ++ ++ + +N  + +VLHDGPPYANGN
Sbjct: 3   YKNSLNLPKTDYPMKGNLNEQEPKRIKKWEENGLYKKMLEARNPDKKYVLHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKD I + K  + +   YVPGWDCHGLPIE +V + L  D K ++  S++
Sbjct: 63  IHIGHALNKILKDFIVKIKNAEGFYAPYVPGWDCHGLPIEHQVDKQLG-DKKYEIPKSEI 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A+  +  Q   FKR GV  DW+NPY+T+D +YEA  ++   +    G IY+G 
Sbjct: 122 RKMCRNYAEKFIDIQREEFKRLGVVGDWDNPYITMDYQYEAITLKELYKFFNNGGIYKGS 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W     TALAEAE+EY + H S SIY  F +        G+      DL + +WTT
Sbjct: 182 KPVYWCIDCVTALAEAEVEY-DDHTSYSIYVKFPVYEETKLKLGVQG----DLNVVIWTT 236

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  VA + + +Y+++ I            NK  + G +L        I+AS+L
Sbjct: 237 TPWTLPANLGVAFHPEFKYSIIRILD--------TNNKNLKKGEML--------IIASEL 280

Query: 405 VPTLEAKWGTKLVIK-KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  L  ++G     + K + G + EN +  HP  +R+  ++I G+++T + GTG+VHTAP
Sbjct: 281 VEKLMGQFGVDSYEEVKQILGVEFENGKCKHPFYDRE-SLMILGEHVTLDQGTGIVHTAP 339

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHGQEDY   LKYGL I +PVDD G F ++   F+GL+V    N  +V+++D   +LI+ 
Sbjct: 340 GHGQEDYEVGLKYGLDIYNPVDDHGNFKKDVELFAGLNV-NKANKIIVEHIDNNGTLILS 398

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP---------- 571
              +H YP+ WR KKP I+RAT QWF S+E    R  A+  I +V+W P           
Sbjct: 399 GNIQHSYPHCWRCKKPVIYRATPQWFISMEANDLRTKALSEIKKVRWTPSWGENRITAMI 458

Query: 572 QEAPGYGADVLRLW-----VSSVDYTGDVMIGPQVLRQMSDIYRK 611
           +  P +     R W     V S    G+++I  ++  ++ D + K
Sbjct: 459 ENRPDWCISRQRSWGVPIAVFSCTECGEIIINEEIQNKVLDAFMK 503



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 121/206 (58%), Gaps = 9/206 (4%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    ++G V  V PQE    YGA++LRLWV++ DYT DV I   +++++ + YR
Sbjct: 603 VDGKGRKMSKSLGNV--VKPQEIIEKYGAEILRLWVAAEDYTEDVRISEDIIKRLVESYR 660

Query: 611 KLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           K+R T RYLLGNL+D+      + +D L  +D+Y L++ + +   I ++ ++YQF   + 
Sbjct: 661 KIRNTARYLLGNLYDFSHNKDYVEFDKLMELDKYILYKWQLVKDRIYKANQNYQFHIFYH 720

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F I DLS FY D+ KDR+Y+    S+ RRS QT +   +  +  V++PIL   A++
Sbjct: 721 TLINFCINDLSAFYLDIIKDRVYSYRADSYQRRSAQTAMFQLIKEMAIVMSPILSFTADE 780

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKWP 755
           +W+ +P     +     EFVF   +P
Sbjct: 781 IWEYMP-----DFSGKKEFVFLETFP 801


>gi|74184865|dbj|BAE39055.1| unnamed protein product [Mus musculus]
          Length = 1012

 Score =  368 bits (945), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 199/471 (42%), Positives = 278/471 (59%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+T+F M+     +   E  I +     +++    ++     F LHDGPPY
Sbjct: 58  GRYRDTVLLPQTSFPMKLLGRQQSDMELGIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ +++  KV +VPGWDCHGLPIE KVL  L  DA+  L+
Sbjct: 118 ANGDPHVGHALNKILKDIANRFHMMRGSKVHFVPGWDCHGLPIETKVLSELGVDAQ-SLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FA+A ++ Q ++F R+GV ADWNN Y T DP+YEA Q+ VF QM  +G +
Sbjct: 177 AMEIREKARSFAQAAIEKQKSAFVRWGVMADWNNCYYTFDPKYEAKQLRVFYQMYEKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV+WSPSSRTALAEAELEY   HVSRSIY  F ++  PP    L +   P + + 
Sbjct: 237 YRSYKPVYWSPSSRTALAEAELEYNPEHVSRSIYVRFPLLRPPPKLESLTDASSP-VSVL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN A+    + +YAVV               K S  G++         I+
Sbjct: 296 VWTTQPWTIPANQAICYMPEAKYAVV---------------KCSASGHLY--------IL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A D +  + +   T   +    +G DLE     HP+   +   ++   ++T   GTGLVH
Sbjct: 333 AEDKIAPVASALETTFDVVAAFSGVDLEGGTCSHPLTPDKVSPLLPATHVTMAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD+ G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYSVASQHSLPMDCLVDEGGMFTDAAGPELQNKAVLKEGTDVVIKMLQATKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++ EE   H YP DWRTK P + RA++QWF ++   + AA +++  VK++P
Sbjct: 453 VLKEENIVHSYPCDWRTKTPVLIRASKQWFVNITDIKAAAKESLKTVKFIP 503



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/189 (39%), Positives = 110/189 (58%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGAD+LR W++  +   +V IGP VL    D   KLR TLR+LLGNL  +    +S+ 
Sbjct: 689 PPYGADILRWWIAESNVFTEVTIGPSVLSAARDDISKLRNTLRFLLGNLTGFNPETDSVP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
             ++ +IDQY L  +++    I +SY+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 749 VKNMYVIDQYMLHLIQDFATKITDSYKQYDFGKVVRLLKAFYTRELSSFYFSIVKDRLYC 808

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRS QT L+  L  +VR  APILPHLAE+V+Q++P+       +  + VF + 
Sbjct: 809 ENEKDPKRRSYQTALAEILDVLVRAFAPILPHLAEEVFQHIPYV------TEPKSVFRTG 862

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 863 WINTSSIWK 871


>gi|429204843|ref|ZP_19196124.1| isoleucyl-tRNA ligase [Lactobacillus saerimneri 30a]
 gi|428146705|gb|EKW98940.1| isoleucyl-tRNA ligase [Lactobacillus saerimneri 30a]
          Length = 931

 Score =  368 bits (945), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 204/469 (43%), Positives = 289/469 (61%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ +T F MR N  V+E E   +W++++V+ +    N+G+  F+LHDGPPYANG
Sbjct: 2   KIKDTLNIGRTKFPMRGNLPVKEAERENIWEENKVYEQRQKLNEGKPTFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHA+NKI KD I R K +  +   YVPGWD HGLPIE ++ ++  +  +K L+ ++
Sbjct: 62  NIHMGHAMNKISKDFIVRSKSMSGFSSPYVPGWDTHGLPIEQQLKKAGVD--RKTLSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A   V  Q   FKR GV ADW++PY+TLDP+YEA QI VFG+M+ +G IY+G
Sbjct: 120 FREKCREYALKQVSMQRKDFKRLGVSADWDHPYVTLDPQYEAQQIRVFGKMAEKGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +ALAEAE+EY +   S S +   +++       G+L+    D  L VWT
Sbjct: 180 KKPVFWSWSSESALAEAEVEYHDV-TSPSAFFAEKVIDG----KGVLDN---DTYLVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P +  V ++AK  Y+VV+           PAN          D +K   ++A++
Sbjct: 232 TTPWTIPGSEGVTIDAKFNYSVVK-----------PAN----------DDRK--FVIATE 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV      +G       K + G +LE  +  HP    +  +V+ GD++T E+GTGLVHTA
Sbjct: 269 LVAKDAELFGWEDYETVKVVKGEELELVKTQHPFYPEKELIVMLGDFVTLEAGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D+    +YGLPI  PV+D+G  T+EAG  F+G+    D N   +  L +   LI
Sbjct: 329 PGFGEDDFNVGKQYGLPIFVPVNDQGYLTDEAGADFAGV-FYEDANDIALDKLSKAGLLI 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +  Y H YP+DWRTKKP IFRAT QWFASV+  RQ  +DAI  VK+ P
Sbjct: 388 KQMEYNHSYPFDWRTKKPIIFRATPQWFASVDKIRQDILDAISGVKFHP 436



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 109/191 (57%), Gaps = 9/191 (4%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GA+++RLWV SVD + DV +     +Q+S+ YRK+R TLR+LL N  D+  
Sbjct: 607 VPEKVIKQMGAEIIRLWVLSVDTSADVRVSMGSFQQISESYRKVRNTLRFLLANTADFDP 666

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + +++ DL  ID+Y L +  +  K I + Y +Y F  I++    FII DLS FY +VA
Sbjct: 667 QADRVAFADLESIDKYMLVKANHFTKEILDDYANYAFMDIYKKTMNFIISDLSAFYMNVA 726

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KD +Y     S  RRS QTVL    + + +++ P+LPH  E+VW+ L          A E
Sbjct: 727 KDVVYIEAADSAKRRSMQTVLYDIAVRLTKLLTPVLPHTTEEVWEYLK--------EAEE 778

Query: 748 FVFESKWPVLD 758
           + + S+ P ++
Sbjct: 779 YAYLSEMPAVE 789


>gi|423332887|ref|ZP_17310669.1| isoleucyl-tRNA synthase [Lactobacillus reuteri ATCC 53608]
 gi|337728005|emb|CCC03094.1| isoleucyl-tRNA synthase [Lactobacillus reuteri ATCC 53608]
          Length = 931

 Score =  368 bits (944), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 206/469 (43%), Positives = 290/469 (61%), Gaps = 38/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L +T F MR    V E +  +LW++++V+      N+G+  FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGRTKFPMRGKLPVTEAQREQLWEENKVYELRQKLNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHA+NKI KD I RYK +  Y+  YVPGWD HGLPIE ++ +S  +  K  LT  +
Sbjct: 62  NIHIGHAMNKISKDFIVRYKSMSGYRAPYVPGWDTHGLPIEHQLTKSGYDRKKMSLT--E 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V  Q   FKR GV  +W++PYLTLD E+EAAQI VFG+ + +G +Y+ 
Sbjct: 120 FRDLCREYALKQVDKQRTDFKRLGVSGEWDHPYLTLDKEFEAAQIRVFGEFAKKGLLYQA 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY +  V+++ + V ++        G L+    D  L VWT
Sbjct: 180 KKPVYWSWSSESALAEAEVEYHDV-VAKTAFFVEQIKDG----KGRLDN---DTYLVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWTVPA+ AVAVN K  Y+VV+           PAN          D +K   +VA+D
Sbjct: 232 TTPWTVPASEAVAVNPKFDYSVVK-----------PAN----------DDRK--FVVATD 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+  L  K G     +   L G + E     HP  +R   V +  DY+T ++GTGLVHTA
Sbjct: 269 LLEKLAEKLGWEDYEVVDHLMGQEFEGMTTQHPYLDRDLLVGL-ADYVTADAGTGLVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G +DY    KY LPI +P++D+G  T+E G+ F G+    D +   ++ L+E  +L+
Sbjct: 328 PGYGDDDYNFGKKYDLPIFAPINDQGVLTKENGEGFEGV-FYQDADDVSLQKLEENNALL 386

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++EP +H YP+DWRTK+P IFRAT+QWF S+E  RQ  ++A+  VK+ P
Sbjct: 387 LQEPLQHSYPFDWRTKQPIIFRATDQWFVSIEKMRQNILNALEDVKYHP 435



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 100/158 (63%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV S D + DV +     +Q+S+ YRKLR T R+LL N  D+    N++SY  
Sbjct: 615 GAEIIRLWVMSADTSADVRVSMGTFQQISEAYRKLRNTFRFLLANTSDFNPEENTVSYGK 674

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y L +L + +K +RE +++Y F   ++++  F+  DLS FY ++AKD LY    
Sbjct: 675 LQSVDKYMLVKLNHFLKTMREDFDNYDFLDAYKVLINFVNNDLSAFYMNIAKDVLYIEAE 734

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RRS QTV    LL++V+++ PILPH  E+VW  L
Sbjct: 735 NSEVRRSMQTVFYDILLTLVKLLTPILPHTTEEVWSYL 772


>gi|319937141|ref|ZP_08011548.1| isoleucyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807507|gb|EFW04100.1| isoleucyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 910

 Score =  368 bits (944), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 198/467 (42%), Positives = 283/467 (60%), Gaps = 40/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N   +EP   + W D  ++ +V  +N+G++ FV HDGPPYANGN
Sbjct: 3   YKDTLLMPKTEFEMRGNLPKKEPAYVQRWQDSAMYEKVVKQNEGKDTFVFHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH +NK++KD+I RYK ++ +   ++PGWD HGLPIE   +Q L  + +K +T ++ 
Sbjct: 63  MHIGHMMNKVIKDVICRYKNMEGFYTPFIPGWDTHGLPIE-NAIQKLGVN-RKAMTTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V  QM    R G +AD+ +PYLTL PE+EA QI+VF +M+++G IY+G 
Sbjct: 121 REKCREYALEQVHKQMEQCIRVGTFADYKHPYLTLMPEFEANQIDVFAKMAMEGLIYKGL 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S +I+  F    A     G+L+    D    +WTT
Sbjct: 181 KPVYWSPSSESALAEAEVEYHDVK-SPTIFVKF----AVKDGKGILDN---DTSFVIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+ +NA   YA+V+                          +K  +IV  +L
Sbjct: 233 TPWTIPANLAICLNADYTYALVQ-------------------------SEKGKLIVLDEL 267

Query: 405 VPTLEAKWG--TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           V +L  K+G   K V+++   GS+LE     HP+ +R+  +VI GD++T E+GTG VHTA
Sbjct: 268 VDSLWEKFGLEEKEVLQR-FKGSELEMVTCQHPLYDRE-SLVILGDHVTAEAGTGCVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PG G +D+V   KYGL I   VD  GK  E+ G++     + D N  V   LDE   L+ 
Sbjct: 326 PGFGMDDFVVGQKYGLDIYCNVDAHGKMMEDCGEWLAGQYVDDANKTVTMKLDELGVLLK 385

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
            E   H YP+DWRTKKP IFRAT+QWF S++  R+  +  I +V W+
Sbjct: 386 LEFITHSYPHDWRTKKPIIFRATDQWFCSIDKIREKLLSEIDKVNWL 432



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 104/188 (55%), Gaps = 5/188 (2%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +    YGAD+LRLW +S+ Y  DV I  ++++Q+++ YRK+R T+R++LGNL D++  
Sbjct: 604 PIKMVNQYGADILRLWATSIAYQSDVRISDEIMKQVAENYRKMRNTMRFVLGNLSDFKSC 663

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
           + +    L  +DQY L +L  +VK  +E+   Y F +  Q+I       LS FY D  KD
Sbjct: 664 DVVETSKLEGVDQYMLVELNQLVKGYKEALNQYDFSEANQLILNCFTNTLSAFYMDFTKD 723

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 749
            LY        RR  QTVL  +  +++++++P+L   AE++  +        D + AE V
Sbjct: 724 ILYIEKADGLRRRQVQTVLYHYAKTMMKLLSPVLVFTAEELHDHFHC-----DENKAESV 778

Query: 750 FESKWPVL 757
           F    P L
Sbjct: 779 FLEPKPEL 786


>gi|238506599|ref|XP_002384501.1| isoleucyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|220689214|gb|EED45565.1| isoleucyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 1006

 Score =  368 bits (944), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 200/474 (42%), Positives = 282/474 (59%), Gaps = 32/474 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R     +   + +  D+   + R     D + FVLHDGPPYANG L
Sbjct: 12  WSSTLKLPKSTFPARVTPADQAKYLRRCTDELYAWQRRERPAD-KPFVLHDGPPYANGEL 70

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD--EDAKKDLTPSK 223
           H+GHALNKILKD+I R +L    +VRYVPGWDCHGLPIELK L++    +DA   ++ + 
Sbjct: 71  HIGHALNKILKDLICRVQLGLGKRVRYVPGWDCHGLPIELKALEAQKGLQDAGGSVSAAV 130

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
           +R +A   A+ TVK QM  F+ + V  DW N + T+D E+E  Q+ VF +M  +G IYR 
Sbjct: 131 IRKEARALARRTVKEQMKGFRSFAVMGDWENHWKTMDKEFEKRQLGVFREMVDKGLIYRR 190

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPS+ TALAEAELEY + HVS +    F ++S P   +      + DL   +WT
Sbjct: 191 FKPVYWSPSTGTALAEAELEYKDDHVSTAALVKFPLLSIPSHLAQNPLLQVKDLTAVIWT 250

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI--IVA 401
           TTPWT+PANA +AV+  L+Y +V  QS   G      ++     ++LK+   V I  ++ 
Sbjct: 251 TTPWTLPANAVIAVHPDLEYTIV--QSDTHGHLLVAQSRLQYLEHILKEDLSVIIPSVLG 308

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           S+L          +   +    G+D E      P        +I  D++T +SG+GLVH 
Sbjct: 309 SEL--------ADRTTYRPLFKGADAEP----QP--------IIAADFVTADSGSGLVHC 348

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDE 516
           APGHG EDY   L  G+   +PVDD G+FT++A      + SG  VL +GN  +++YL+ 
Sbjct: 349 APGHGMEDYEACLSRGITAFAPVDDHGRFTDKAMPSDPTRLSGKSVLDEGNATILEYLES 408

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Q  L+ +  YEHKYPYDWR+K+P I RATEQWFA V   R++A+ A+  +++VP
Sbjct: 409 QGHLLSKHRYEHKYPYDWRSKRPIIIRATEQWFADVGDIRESAVKALEDIRFVP 462



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 96/160 (60%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
           G D LR+WV+S DYT DV+IG QVL+ ++    K R T + LLG L D+R+ N + Y+ L
Sbjct: 674 GPDALRMWVASSDYTRDVVIGKQVLQTVNTSLHKYRVTFKLLLGALSDFRLDNQVPYNQL 733

Query: 638 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
              D+ AL  L  ++ + +++ E+++F+K    + R+  ++ S FY +  KDRLYT G  
Sbjct: 734 QQADRIALKHLSEMILSCQKACENFEFYKAVNALNRWANLEFSAFYMEAIKDRLYTYGEN 793

Query: 698 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           S +RR+ QT L      +   +API P L E+ W++ P A
Sbjct: 794 SASRRAAQTTLFHIYRHLQEALAPITPMLVEETWEHTPEA 833


>gi|389580209|ref|ZP_10170236.1| isoleucyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
 gi|389401844|gb|EIM64066.1| isoleucyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
          Length = 931

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 195/469 (41%), Positives = 277/469 (59%), Gaps = 35/469 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T++LP T F M+AN   REPE+ K W+   ++ ++ +++ D   F+LHDGPPYANG+
Sbjct: 3   YKKTLNLPSTQFAMKANLPQREPEMIKAWEQKNIYKKLREQSKDKPLFILHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHA+NKILKDII R + +  +   YVPGWDCHGLPIE  V + L    KK++TP ++
Sbjct: 63  LHMGHAINKILKDIIIRSRQMCGFNAPYVPGWDCHGLPIEHNVDKKLGS-RKKEMTPVEV 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  ++A + V  Q   FKR+GV  DW+ PYLT+D  YEA   +  G+  L G ++ GK
Sbjct: 122 RRECREYAASFVDIQREEFKRFGVSGDWDAPYLTMDYPYEACIAKECGEFGLSGDMFLGK 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KP++W  +  TALAEAE+EY + H S SIY  F       +   L +     + + +WTT
Sbjct: 182 KPIYWCCNCETALAEAEIEYHD-HTSPSIYVKF---PVEDNAKDLFDADGETVSVVIWTT 237

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  V ++    YA V                        K Q +  +I+A +L
Sbjct: 238 TPWTLPANLGVCLHPDFVYAAV------------------------KTQNQGVLIIAKEL 273

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V T+  ++G +   I   L+  DLEN    HP  +R   ++I GD++T E+GTG VHTAP
Sbjct: 274 VETVMGEFGISDYAIIADLSAKDLENRNCKHPFYDRD-SLIILGDHVTLEAGTGCVHTAP 332

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG +D++   +YGL   SPV+D G F++    F G  +    N  + K L+E+ +L+ +
Sbjct: 333 GHGADDHIAGNRYGLECYSPVEDNGTFSQGVELFEGQFIF-KANAEINKTLEEKGALLKQ 391

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           E   H YP+ WR KKP I+RAT QWF S++  G RQ A+D I  V W+P
Sbjct: 392 ENMSHSYPHCWRCKKPVIYRATPQWFISMDNLGLRQKALDEINNVHWIP 440



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 106/161 (65%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 636
           YGADVLRLW +S DY GDV I   +++Q+SD YR++R T R+LLGN   +        ++
Sbjct: 620 YGADVLRLWAASADYRGDVSISDNIIKQLSDAYRRIRNTCRFLLGNFTGFEPSQVRPIEN 679

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +D++ L +L  +VK  R +Y++Y+F  I+  +  F +VDLS+FY D+ KDR+YT   
Sbjct: 680 MAELDRFILHRLHYVVKRCRAAYDAYEFHVIYHTLHNFCVVDLSSFYLDIIKDRVYTSPE 739

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
            S TR+  QTV+   L ++V+++APILP  AE+++ ++P  
Sbjct: 740 NSDTRKDAQTVMFMILDALVKIMAPILPFTAEEIYTHMPLG 780


>gi|344296469|ref|XP_003419929.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial [Loxodonta
           africana]
          Length = 1012

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 197/471 (41%), Positives = 281/471 (59%), Gaps = 29/471 (6%)

Query: 104 GRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           G+Y+ TV LP+T+F M+     +   E EI +     +++    ++     F LHDGPPY
Sbjct: 58  GKYRDTVLLPQTSFPMKLLGRQQPDTELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NRY +++  K+ +VPGWDCHGLPIE+KVL  L E A+  L+
Sbjct: 118 ANGDAHVGHALNKILKDIANRYHMMKGSKIHFVPGWDCHGLPIEIKVLSELGEKAQ-SLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FAKA  + Q ++F R+G+ ADW+N Y T D +YEA Q+ +F +M  +G +
Sbjct: 177 AVEIREKARSFAKAAAEKQKSAFTRWGIMADWDNCYYTFDKKYEANQLRIFYEMYEKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV WSPSSRTALAEAELEY   H+SRS+Y  F +    P  + LL+     + + 
Sbjct: 237 YRAYKPVFWSPSSRTALAEAELEYNPEHISRSVYVKFPVSRPSPVLAPLLDGS-STVSVL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN AV      +YAVV               K +  G+V         I+
Sbjct: 296 VWTTQPWTIPANQAVCYMLDAKYAVV---------------KCANSGDVY--------IL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A+D V ++ +   TK  +  T  G+DLEN    HP+   +   ++   ++T   GTGLVH
Sbjct: 333 AADKVTSVASALETKFEVISTFLGADLENGTCTHPIFPDKVSPLLPASHVTVAKGTGLVH 392

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ L +   V+++G FT+ AG +     VL +G   V+K L    +
Sbjct: 393 TAPAHGMEDYSVASQHSLSMDCLVNEDGIFTDGAGPELQNKAVLEEGTDVVIKMLQAAKN 452

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ EE   H YPYDWRTKKP + RA++QWF ++   +  A + + +VK++P
Sbjct: 453 LLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNIADIKPTAKELLKKVKFIP 503



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 80/164 (48%), Positives = 101/164 (61%), Gaps = 1/164 (0%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP  L    D   KLR TLR+LLGNL  +    +SI 
Sbjct: 689 PPYGADVLRWWVAESNVLTEVTIGPSALNAARDDINKLRNTLRFLLGNLSGFNPETDSIP 748

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
             D+ ++DQY L  L+     I ESY+ Y F K+ +++Q F   +LSNFYF V KDRLY 
Sbjct: 749 TKDMYVLDQYMLHLLQGFANKITESYKQYDFGKVVRLLQAFYTRELSNFYFSVVKDRLYC 808

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P+A
Sbjct: 809 ESEDDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIPYA 852


>gi|405983211|ref|ZP_11041521.1| isoleucine-tRNA ligase [Slackia piriformis YIT 12062]
 gi|404389219|gb|EJZ84296.1| isoleucine-tRNA ligase [Slackia piriformis YIT 12062]
          Length = 948

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 196/477 (41%), Positives = 282/477 (59%), Gaps = 41/477 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YKH+++LPKT F MRAN    EP+  + W +  ++ RV +KN DGE F+LHDGPPYANG 
Sbjct: 5   YKHSMNLPKTDFAMRANLPENEPKRLEKWVEQDIYHRVLEKNKDGEPFILHDGPPYANGP 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA NKILKD + +    + Y   Y+PGWDCHG PIE +V + L  +  K+L  SK+
Sbjct: 65  IHIGHAFNKILKDFVVKSHAQRGYFTPYIPGWDCHGQPIEHEVEKKLGTEKMKELPQSKV 124

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A+  V  Q   FKR GV  DW +PYLT  P +E+A +EVF QM L G +YRG+
Sbjct: 125 RELCREWAERFVDVQREGFKRLGVNGDWEHPYLTFQPSFESANVEVFKQMYLDGAVYRGR 184

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAP-PSTSGLLNEFLPDLGLAVWT 343
           KP+HW     TALAEAE+EY +  +S SIY  F++   P P  +  ++    +  + +WT
Sbjct: 185 KPIHWCKHCHTALAEAEIEYAD-EMSPSIYVNFKLNEVPEPFVAAGVD--ADNAYVLIWT 241

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN AV+   +++Y  VE            A+ K             F++ A +
Sbjct: 242 TTPWTLPANTAVSFGPEIKYCFVE------------ADGK-------------FMLFAHE 276

Query: 404 LVPTLE--AKWGTKLVIKKT-----LAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGT 456
           +V  +   A W    V++       + G       YV PV       +I GD++T ++GT
Sbjct: 277 MVEQVAEVAGWENYRVVEADGEPVLMNGDQFGGVTYVCPVIQDNVGRIIWGDHVTLDAGT 336

Query: 457 GLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDE 516
           G VHTAPGHG +DY+   ++G+  + PVDD+G+FT+    F+GLD   + N  ++++L E
Sbjct: 337 GAVHTAPGHGVDDYLVGQEFGIETIMPVDDDGRFTDYVPLFAGLDT-DEANPKIIEWLKE 395

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 570
           Q +L+      H YP+ WR  +P IFRAT+QWF S+E  G R+AA+D I   V+W+P
Sbjct: 396 QGTLVAHVDINHSYPHCWRCHQPVIFRATDQWFVSMEKTGLREAALDQIRNHVQWIP 452



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/201 (39%), Positives = 115/201 (57%), Gaps = 4/201 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH--DWR 627
           P +    YGADVLRLWV+S DY+ DV IG  +L++ SD YR+ R T R+LLGNL   DW 
Sbjct: 628 PREVTDKYGADVLRLWVASTDYSVDVSIGDTILQRTSDAYRRFRNTFRFLLGNLDGFDWE 687

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + + + DL  ID +A+ +L  ++  +   Y+ Y+F  +F+ +  ++I DLS  Y DV 
Sbjct: 688 -RDCVDFADLKPIDVWAMLRLREVLHEVERGYDEYKFHSVFRALYDYVITDLSAVYMDVI 746

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KDRLY     S +RR+ QTVL   L  +VRV++PIL    ++VW++ P A    +G    
Sbjct: 747 KDRLYAEAPNSVSRRAAQTVLMNILEVMVRVMSPILSFTCDEVWEHYPEAERNREGRPVN 806

Query: 748 FVFESKWPVLDEKWRTFPVGE 768
               + WP   +     P GE
Sbjct: 807 VQL-AGWPTDADFAPALPEGE 826


>gi|309809437|ref|ZP_07703295.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308170109|gb|EFO72144.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 928

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 196/469 (41%), Positives = 289/469 (61%), Gaps = 40/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L  T F MR N  VRE E  K W+D+ ++ +    N+G   F +HDGPP+ANG
Sbjct: 2   KIKDTLNLGNTKFKMRGNLPVREAEWQKQWEDNNLYEQRLKLNEGHPRFDMHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK ++ +   +VPGWD HGLPIE ++ +      +K+L  ++
Sbjct: 62  NIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKK--GVKRKELNMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A + ++ Q   FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+G
Sbjct: 120 YRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS + LAEAE+EY +   + SI+  F+++        LL+    +  L +WT
Sbjct: 180 KKPVYWSWSSESTLAEAEVEYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+ VN K  Y++V++                       D+K    +VA+ 
Sbjct: 233 TTPWTIPANEAICVNPKFDYSLVQVN----------------------DKK---FVVATG 267

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    V+ K+  GS++E  +  HP+ +++  +VI G ++T + GTGLVHT
Sbjct: 268 LLEKVAQEIGWDEYHVV-KSFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APG G +D+   LKY LPI SPVD +G +T+E  + +G+    D +  +++ L    +L+
Sbjct: 326 APGFGADDFNVGLKYNLPIFSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 385 KLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 97/158 (61%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +DQY   +L  ++    ++Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLDAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
               RRS QTV+   L+ + +++ PILPH  E++W  L
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYL 770


>gi|309804256|ref|ZP_07698333.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308163659|gb|EFO65929.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 928

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 196/469 (41%), Positives = 290/469 (61%), Gaps = 40/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L  T F MR N  VRE E  K W+D+ ++ +    N+G   F +HDGPP+ANG
Sbjct: 2   KIKDTLNLGNTKFKMRGNLPVREAEWQKQWEDNDLYEQRLKLNEGHPRFDMHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK ++ +   +VPGWD HGLPIE ++ +   +  +K+L  ++
Sbjct: 62  NIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVK--RKELNMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A + ++ Q   FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+G
Sbjct: 120 YRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS + LAEAE+EY +   + SI+  F+++        LL+    +  L +WT
Sbjct: 180 KKPVYWSWSSESTLAEAEVEYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+ VN K  Y++V++                       D+K    +VA+ 
Sbjct: 233 TTPWTIPANEAICVNPKFDYSLVQVN----------------------DKK---FVVATG 267

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    V+ K+  GS++E  +  HP+ +++  +VI G ++T + GTGLVHT
Sbjct: 268 LLEKVAQEIGWDEYHVV-KSFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APG G +D+   LKY LPI SPVD +G +T+E  + +G+    D +  +++ L    +L+
Sbjct: 326 APGFGADDFNVGLKYNLPIFSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 385 KLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 97/158 (61%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +DQY   +L  ++    E+Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
               RRS QTV+   L+ + +++ PILPH  E++W  L
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYL 770


>gi|158256300|dbj|BAF84121.1| unnamed protein product [Homo sapiens]
          Length = 940

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 189/420 (45%), Positives = 263/420 (62%), Gaps = 26/420 (6%)

Query: 152 FVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL 211
           F LHDGPPYANG+ H+GHALNKILKDI NR+ ++   K+ +VPGWDCHGLPIE+KVL  L
Sbjct: 37  FCLHDGPPYANGDPHVGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSEL 96

Query: 212 DEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVF 271
             +A+ +L+  ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+  F
Sbjct: 97  GREAQ-NLSAMEIRKKAGSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLRTF 155

Query: 272 GQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLN 331
            QM  +G +YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++
Sbjct: 156 YQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLID 215

Query: 332 EFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLK 391
              P + + VWTT PWT+PAN AV    + +YAVV               K S+ G++  
Sbjct: 216 GSSP-VSILVWTTQPWTIPANEAVCYMPESKYAVV---------------KCSKSGDLY- 258

Query: 392 DQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYIT 451
                  ++A+D V ++ +   T      TL+G DLEN    HP+   +   ++  +++T
Sbjct: 259 -------VLAADKVASVASTLETTFETISTLSGVDLENGTCSHPLIPDKASPLLPANHVT 311

Query: 452 TESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAV 510
              GTGLVHTAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V
Sbjct: 312 MAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVV 371

Query: 511 VKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +K L    +L+ EE   H YPYDWRTKKP + RA++QWF ++   + AA + + +VK++P
Sbjct: 372 IKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINITDIKTAAKELLKKVKFIP 431



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/189 (44%), Positives = 112/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 617 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 676

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 677 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSNFYFSIIKDRLYC 736

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 737 EKENDPKRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 790

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 791 WISTSSIWK 799


>gi|425773281|gb|EKV11642.1| Isoleucyl-tRNA synthetase, putative [Penicillium digitatum Pd1]
 gi|425778928|gb|EKV17029.1| Isoleucyl-tRNA synthetase, putative [Penicillium digitatum PHI26]
          Length = 997

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 206/477 (43%), Positives = 287/477 (60%), Gaps = 38/477 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK++F  R + + R   + +  DD   + R     D + FVLHDGPPYANG+L
Sbjct: 12  WTSTLKLPKSSFPPRVSPVDRTKYLKRCTDDLYAWQRRERPAD-QPFVLHDGPPYANGDL 70

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL-DED-AKKDLTPSK 223
           H+GHALNKILKDII R +L +  +VRYVPGWDCHGLPIELK LQ L +ED A   ++ + 
Sbjct: 71  HVGHALNKILKDIICRIQLGRGKRVRYVPGWDCHGLPIELKALQGLRNEDLASGSVSAAV 130

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
           +R  A K A+ TVK QM  F+   V ADW N + T+D ++E  Q+ +F  M  +G IYR 
Sbjct: 131 IRTSARKLARQTVKEQMKVFRGCAVMADWENHWKTMDKQFEMRQLGIFRGMVDRGLIYRK 190

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL--PDLGLAV 341
            KPV+WSPS+ TALAEAELEY + H+S +    F +V  P   S   N  L   D+   +
Sbjct: 191 FKPVYWSPSTSTALAEAELEYKDDHISTAALVRFPLVDIPTHLSE--NPLLRGKDVSAVI 248

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PANAA+AV+  L+Y +V                  + G++L  Q + F  + 
Sbjct: 249 WTTTPWTLPANAAIAVSESLEYTIV---------------LSEKHGHLLIAQAR-FEYLQ 292

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPV---DNRQCPVVIGGDYITTESGTGL 458
           S L   L        VI  ++ GS+L       P+      Q   +   D++T +SG+G+
Sbjct: 293 SMLKEDLS-------VIVPSILGSELAEQTTYRPLFKGPEAQPQPIFAADFVTADSGSGM 345

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKY 513
           VH APGHG +DY   L  G+P+ +PV+DEG+FT++A      + +G  VLG+GN AV+++
Sbjct: 346 VHCAPGHGMDDYEACLARGIPVFAPVNDEGQFTDKAMPLDPTRLAGKPVLGEGNTAVLEW 405

Query: 514 LDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++    L+ +  YEHKYPYDWR+K P I RATEQWFA V   R +A+ A+  V++VP
Sbjct: 406 VESCGQLLAQHKYEHKYPYDWRSKLPIIVRATEQWFADVADIRTSALRALEDVRFVP 462



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 97/169 (57%), Gaps = 3/169 (1%)

Query: 570 PPQEAPGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW 626
           P  + P Y   G D LR+W +S DYT DV+IG QVL+ ++    K R T + LLG L D+
Sbjct: 666 PENQEPVYDALGPDALRMWAASSDYTRDVVIGKQVLQTVNTSLHKFRVTFKLLLGALADF 725

Query: 627 RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
             GN + Y  L ++D+ AL  L ++V   +++ ++++F+K    + R+  ++ S FY + 
Sbjct: 726 HPGNIVPYGRLQLVDRIALKHLSDMVLASQKACDNFEFYKGVSTMNRWANLEFSAFYMEA 785

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
            KDRLYT G  S +RR+ QT L      +   + PI P L E+ W++ P
Sbjct: 786 IKDRLYTLGEDSTSRRAAQTTLFYIYNHLQEALGPITPVLVEETWEHTP 834


>gi|293400858|ref|ZP_06645003.1| isoleucine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305884|gb|EFE47128.1| isoleucine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 908

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 197/468 (42%), Positives = 277/468 (59%), Gaps = 38/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANG 163
            YK T+ +PKT F MR     +EP   K W +  ++ ++  K +G E F+LHDGPPYANG
Sbjct: 2   EYKETLLMPKTKFEMRGKLPSKEPGFQKRWKEQNIYEKMLKKREGCEPFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++H+GHALNKILKD+I R K +  YKV Y+PGWD HGLPIE   +Q L  + +K++  + 
Sbjct: 62  DIHLGHALNKILKDVIIRSKFMDGYKVPYIPGWDTHGLPIE-TAIQKLGHN-RKEMELAD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   V+ Q A F   GV  D+++PY+TL  E+EA QIE+FG+M++ G IY+G
Sbjct: 120 FRKLCYNYAMEQVEKQKAGFLSLGVVGDYDHPYITLTKEFEAHQIEIFGKMAMNGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS TALAEAE+EY +   S +I+  F +        G+L+    D    +WT
Sbjct: 180 LKPVYWSPSSETALAEAEIEYKDVK-SPTIFVKFPVKDG----KGILDS---DTSFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+ +N    YA+V                         + +K  +IV  +
Sbjct: 232 TTPWTIPANLAICLNKDYTYALV-------------------------NSEKGKLIVLEE 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV  L  K+G +   + KT  GS+LE     HP+ +R+  ++I GD++T ++GTG VHTA
Sbjct: 267 LVDALWEKFGLQEKQLLKTFKGSELEMITCQHPLYDRE-SLIILGDHVTADAGTGCVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PG G +D+    KYGLP    VD+ G    +AG++     + D N  V + LDE  +L+ 
Sbjct: 326 PGFGADDFFVGQKYGLPAYCNVDEHGCMMSDAGEWLAGQYVDDANKTVTQKLDEIGALLK 385

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++  R   ++ I  V W+P
Sbjct: 386 LEFITHSYPHDWRTKKPIIFRATTQWFASIDKIRDQLLEEIDNVDWIP 433



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 99/165 (60%), Gaps = 8/165 (4%)

Query: 574 APG-----YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNL---HD 625
           APG     YGAD+LRLW +SVDY  D  +  ++L+Q+S+ YRK+R T R+LL N+   +D
Sbjct: 603 APGEITKKYGADILRLWAASVDYQADCSMSDEILKQISENYRKVRNTFRFLLANIDGEND 662

Query: 626 WRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFD 685
           +   + +  + LP +D+Y L  L ++ + ++++Y  Y+F  +  ++   +  + S +Y D
Sbjct: 663 FTKADLVDVNTLPALDKYMLIMLADVCEKVKKAYGEYRFADVTSMLTNLMTNEFSAYYLD 722

Query: 686 VAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
             KD LY     S  RR  QTVL   + ++VR+ APIL H AE+V
Sbjct: 723 YTKDILYIEKKDSNRRRQVQTVLYYAVDTLVRLWAPILTHTAEEV 767


>gi|319789620|ref|YP_004151253.1| isoleucyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114122|gb|ADU96612.1| isoleucyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 936

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 208/526 (39%), Positives = 302/526 (57%), Gaps = 55/526 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKND-GENFVLHDGPPYANGN 164
           YK T++LPKT F MR N   +EPEI K W+   ++ ++ DK+   E FVLHDGPPYANG+
Sbjct: 6   YKETLNLPKTAFPMRGNLPKKEPEILKEWEKLNLYRKLLDKHQCDEKFVLHDGPPYANGH 65

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDI+N+ K LQ Y+  +VPGWDCHGLPIE  V + L +  K ++ P ++
Sbjct: 66  IHIGHALNKILKDIVNKSKALQGYQTPFVPGWDCHGLPIERAVFKKLKK-RKHEVDPLEV 124

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++AK  ++ Q   F R GV  DWNNPY+T+DP+Y+A  +   G+   +G +YR K
Sbjct: 125 RKKCREYAKQWIETQREEFIRLGVVGDWNNPYITMDPKYQADIVRELGKFYEKGLVYRAK 184

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV W PS  TALAEAE+EY     S SI+  F + +      G++ E      L +WTT
Sbjct: 185 KPVFWCPSCVTALAEAEIEY-GEEESPSIFVAFEVTNG----KGVVPE---GTRLVIWTT 236

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN AVA N +L Y +                        L+ +K  F+ VA +L
Sbjct: 237 TPWTLPANVAVAANPELTYVL------------------------LRTEKGRFV-VAKEL 271

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           +   + + G    ++K L G++LE   Y HP   R+  VV+  DY+  ++GTGLVH APG
Sbjct: 272 LEQFKEQTGIDGEVEKELQGAELEGVEYSHPFIERKGQVVLA-DYVAADTGTGLVHIAPG 330

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG+EDY   L+Y LP+L PVDD G+F +EA ++   + +   N  +++ L E   L+   
Sbjct: 331 HGEEDYQVGLRYNLPVLVPVDDYGRFNQEAPEWLRGEKIWQANSLIIERLKESGHLLFAG 390

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEG----FRQAAMDAIGQVKWVPP--------- 571
              H YP+ WR K   IFRAT QWF +++      R+ A+  I +V+W+P          
Sbjct: 391 TISHSYPHCWRCKGKVIFRATPQWFIAMDKGNPTLREVALKEIDRVQWIPQWGRTRIRNM 450

Query: 572 -QEAPGYGADVLRLW-VSSVDY----TGDVMIGPQVLRQMSDIYRK 611
            +  P +     R+W V  V +     G+V+   ++  +++ I+ K
Sbjct: 451 VESRPDWCISRQRIWGVPIVAFYCKKCGEVIFSREIAERVAQIFEK 496



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 112/181 (61%), Gaps = 7/181 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 636
           YGAD+LRLWV+S ++T DV I   +LR ++++Y+K+R T+R++LGNL+D+     + Y++
Sbjct: 620 YGADILRLWVASENFTEDVRISDNILRGVAEVYKKIRNTIRFMLGNLNDFTPAQMLPYEE 679

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  ID++AL +   +V  + E Y +Y+F +I++ I  +  V+LS+ Y D+ KD LY    
Sbjct: 680 LEEIDKWALNRFHQLVNEVVEHYNNYRFNRIYRRIYEYCSVELSSVYLDILKDTLYCEHP 739

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 756
            S  RRS QT +   L  ++ ++API+   AE+ + +LP       G   E VF  ++P 
Sbjct: 740 RSKKRRSAQTAIYQILYGLITLLAPIISFTAEEAYSHLP-------GREKESVFLEEFPP 792

Query: 757 L 757
           L
Sbjct: 793 L 793


>gi|373451746|ref|ZP_09543665.1| isoleucine-tRNA ligase [Eubacterium sp. 3_1_31]
 gi|371967967|gb|EHO85434.1| isoleucine-tRNA ligase [Eubacterium sp. 3_1_31]
          Length = 908

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 198/468 (42%), Positives = 277/468 (59%), Gaps = 38/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANG 163
            YK T+ +PKT F MR     +EP   K W +  ++ ++  K +G E FVLHDGPPYANG
Sbjct: 2   EYKETLLMPKTKFEMRGKLPSKEPGFQKRWKEQNIYEKMLKKREGCEPFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++H+GHALNKILKD+I R K +  YKV Y+PGWD HGLPIE   +Q L  + +K++  + 
Sbjct: 62  DIHLGHALNKILKDVIIRSKFMDGYKVPYIPGWDTHGLPIE-TAIQKLGHN-RKEMELAD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   V+ Q A F   GV  D+++PY+TL  E+EA QIE+FG+M++ G IY+G
Sbjct: 120 FRKLCYNYAMEQVEKQKAGFLSLGVVGDYDHPYITLTKEFEAHQIEIFGKMAMNGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS TALAEAE+EY +   S +I+  F +        G+L+    D    +WT
Sbjct: 180 LKPVYWSPSSETALAEAEIEYKDVK-SPTIFVKFPVKDG----KGILD---TDTSFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+ +N    YA+V                         + +K  +IV  +
Sbjct: 232 TTPWTIPANLAICLNKDYTYALV-------------------------NSEKGKLIVLEE 266

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV  L  K+G +   + KT  GS+LE     HP+ +R+  ++I GD++T ++GTG VHTA
Sbjct: 267 LVDALWEKFGLQEKQLLKTFKGSELEMITCQHPLYDRE-SLIILGDHVTADAGTGCVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PG G +D+    KYGLP    VD+ G    +AG++     + D N  V + LDE  +L+ 
Sbjct: 326 PGFGADDFFVGQKYGLPAYCNVDEHGCMMSDAGEWLAGQYVDDANKTVTQKLDEIGALLK 385

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++  R   ++ I  V W+P
Sbjct: 386 LEFITHSYPHDWRTKKPIIFRATTQWFASIDKIRDQLLEEIDNVDWIP 433



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 99/165 (60%), Gaps = 8/165 (4%)

Query: 574 APG-----YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNL---HD 625
           APG     YGAD+LRLW +SVDY  D  +  ++L+Q+S+ YRK+R T R+LL N+   +D
Sbjct: 603 APGEITKKYGADILRLWAASVDYQADCSMSDEILKQISENYRKVRNTFRFLLANIDGEND 662

Query: 626 WRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFD 685
           +   + +  + LP +D+Y L  L ++ + ++++Y  Y+F  +  ++   +  + S +Y D
Sbjct: 663 FTKADLVDVNTLPALDKYMLIMLADVCEKVKKAYGEYRFADVTSMLTNLMTNEFSAYYLD 722

Query: 686 VAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
             KD LY     S  RR  QTVL   + ++VR+ APIL H AE+V
Sbjct: 723 YTKDILYIEKKDSNRRRQVQTVLYYAVDTLVRLWAPILTHTAEEV 767


>gi|169785575|ref|XP_001827248.1| isoleucyl-tRNA synthetase [Aspergillus oryzae RIB40]
 gi|83775996|dbj|BAE66115.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|391866160|gb|EIT75432.1| Isoleucyl-tRNA synthetase [Aspergillus oryzae 3.042]
          Length = 1006

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 200/474 (42%), Positives = 282/474 (59%), Gaps = 32/474 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R     +   + +  D+   + R     D + FVLHDGPPYANG L
Sbjct: 12  WSSTLKLPKSTFPARVTPADQAKYLRRCTDELYAWQRRERPAD-KPFVLHDGPPYANGEL 70

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD--EDAKKDLTPSK 223
           H+GHALNKILKD+I R +L    +VRYVPGWDCHGLPIELK L++    +DA   ++ + 
Sbjct: 71  HIGHALNKILKDLICRVQLGLGKRVRYVPGWDCHGLPIELKALEAQKGLKDAGGSVSAAV 130

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
           +R +A   A+ TVK QM  F+ + V  DW N + T+D E+E  Q+ VF +M  +G IYR 
Sbjct: 131 IRKEARALARRTVKEQMKGFRSFAVMGDWENHWKTMDKEFEKRQLGVFREMVDKGLIYRR 190

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPS+ TALAEAELEY + HVS +    F ++S P   +      + DL   +WT
Sbjct: 191 FKPVYWSPSTGTALAEAELEYKDDHVSTAALVKFPLLSIPSHLAQNPLLQVKDLTAVIWT 250

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI--IVA 401
           TTPWT+PANA +AV+  L+Y +V  QS   G      ++     ++LK+   V I  ++ 
Sbjct: 251 TTPWTLPANAVIAVHPDLEYTIV--QSDTHGHLLVAQSRLQYLEHILKEDLSVIIPSVLG 308

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           S+L          +   +    G+D E      P        +I  D++T +SG+GLVH 
Sbjct: 309 SEL--------ADRTTYRPLFKGADAEP----QP--------IIAADFVTADSGSGLVHC 348

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDE 516
           APGHG EDY   L  G+   +PVDD G+FT++A      + SG  VL +GN  +++YL+ 
Sbjct: 349 APGHGMEDYEACLSRGITAFAPVDDHGRFTDKAMPSDPTRLSGKSVLDEGNATILEYLES 408

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Q  L+ +  YEHKYPYDWR+K+P I RATEQWFA V   R++A+ A+  +++VP
Sbjct: 409 QGHLLSKHRYEHKYPYDWRSKRPIIIRATEQWFADVGDIRESAVKALEDIRFVP 462



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 96/160 (60%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
           G D LR+WV+S DYT DV+IG QVL+ ++    K R T + LLG L D+R+ N + Y+ L
Sbjct: 674 GPDALRMWVASSDYTRDVVIGKQVLQTVNTSLHKYRVTFKLLLGALSDFRLDNQVPYNQL 733

Query: 638 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
              D+ AL  L  ++ + +++ E+++F+K    + R+  ++ S FY +  KDRLYT G  
Sbjct: 734 QQADRIALKHLSEMILSCQKACENFEFYKAVNALNRWANLEFSAFYMEAIKDRLYTYGEN 793

Query: 698 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           S +RR+ QT L      +   +API P L E+ W++ P A
Sbjct: 794 SASRRAAQTTLFHIYRHLQEALAPITPMLVEETWEHTPEA 833


>gi|402857160|ref|XP_003893139.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Papio anubis]
          Length = 1007

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 201/471 (42%), Positives = 282/471 (59%), Gaps = 34/471 (7%)

Query: 104 GRYKHTVDLPKTTFGMRA---NALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           GRY+ TV LP+T+F M+        +E EI +     +++    ++     F LHDGPPY
Sbjct: 58  GRYRDTVLLPQTSFPMKLLGRQQPDKELEIQQKCGFSELYSWQRERKVKTEFCLHDGPPY 117

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+ H+GHALNKILKDI NR+ ++   KV +VPGWDCHGLPIE+KVL  L  +A+ +L+
Sbjct: 118 ANGDPHVGHALNKILKDIANRFHMMSGSKVHFVPGWDCHGLPIEIKVLSELGREAQ-NLS 176

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
             ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+  F QM  +G +
Sbjct: 177 AMEIREKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLRTFYQMYDKGLV 236

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++   P +   
Sbjct: 237 YRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLIDGSSP-VSFL 295

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           VWTT PWT+PAN AV    + +YAVV               K S+ G++         ++
Sbjct: 296 VWTTQPWTIPANEAVCYMPESKYAVV---------------KCSKSGDLY--------VL 332

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A+D V T+ +             G DLEN    HP+   +   ++  +++T   GTGLVH
Sbjct: 333 AADKVETVASTLEFSFP-----TGVDLENGTCSHPLIPDKASPLLPANHVTMAKGTGLVH 387

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V+K L    +
Sbjct: 388 TAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQTAKN 447

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ EE   H YPYDWRTKKP + RA++QWF ++   + AA + + +VK++P
Sbjct: 448 LLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIKIAAKELLKKVKFIP 498



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 84/189 (44%), Positives = 112/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 684 PPYGADVLRWWVADSNVFTEVAIGPSVLNSARDDISKLRNTLRFLLGNVADFNPETDSIP 743

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 744 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYC 803

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 804 EKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 857

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 858 WISTSSIWK 866


>gi|358375898|dbj|GAA92473.1| isoleucyl-tRNA synthetase [Aspergillus kawachii IFO 4308]
          Length = 1005

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 206/479 (43%), Positives = 284/479 (59%), Gaps = 40/479 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R     R   + +  DD   + +  ++   + FVLHDGPPYANG L
Sbjct: 12  WSSTLKLPKSTFPARVTPADRTKYLQRCTDDLYAWQQ-RERPASQPFVLHDGPPYANGEL 70

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKD----LTP 221
           H+GHALNK+LKDII R +L    ++RYVPGWDCHGLPIELK L++  E   ++    ++ 
Sbjct: 71  HIGHALNKVLKDIICRVQLGLGKRIRYVPGWDCHGLPIELKALEAQKELQGQEYNGPVSA 130

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           + +R  A K A  TVKAQM  F+ + V ADW N + T+D  +E  Q+ VF +M  +G IY
Sbjct: 131 ALVRKAARKLADRTVKAQMKGFRSFAVMADWENHWKTMDKAFEKRQLGVFREMVDKGLIY 190

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPP--STSGLLNEFLPDLGL 339
           R  KPV+WSPS+ TALAEAELEY E HVS +    + + S P   +   LL +   ++  
Sbjct: 191 RRFKPVYWSPSTGTALAEAELEYKEDHVSTAALVKYPLASIPEHLAQDPLLKD--KEISA 248

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI- 398
            +WTTTPWT+PANAA++V+  L Y +V+  +                G +L  Q ++   
Sbjct: 249 VIWTTTPWTLPANAAISVHPSLDYTIVDSDTQ---------------GYLLIAQSRLEYL 293

Query: 399 --IVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGT 456
             I+  DL   + A  G+KL        +D    R +    + +   +I  D++T +SG+
Sbjct: 294 EGILKEDLSVIVPAIPGSKL--------ADQTTYRSLFKGPDAEPQPIIAADFVTADSGS 345

Query: 457 GLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVV 511
           GLVH APGHG EDY   L  G+P  +PVDD GKFT++A      + SG  VLGDGN AV+
Sbjct: 346 GLVHCAPGHGMEDYEACLSRGIPAFAPVDDNGKFTDKAMPSDPTRLSGKSVLGDGNAAVL 405

Query: 512 KYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +Y++ +  LI +  YEHKYPYDWR+K P I RATEQWFA V   R +AM A+  V +VP
Sbjct: 406 EYVESKGLLITKHRYEHKYPYDWRSKLPIIIRATEQWFADVADIRGSAMTALEDVNFVP 464



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 99/168 (58%), Gaps = 3/168 (1%)

Query: 573 EAPGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           +AP Y   G D LR+WV+S DYT DV+IG QVL+ ++    K R T + LLG L D+R  
Sbjct: 671 QAPVYDALGPDALRMWVASSDYTRDVVIGKQVLQTVNTSLHKYRVTFKLLLGALSDFRPE 730

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
           + + YD L  +D+ AL  L + V   +++ E+++F+K    I R+  ++ S FY +  KD
Sbjct: 731 DRLPYDQLQQVDRIALKHLSDTVVACQKACENFEFYKAVNAINRWANLEFSAFYMEAIKD 790

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           RLYT    S +RR+ QT L      +  V+API P L E+ W++ P A
Sbjct: 791 RLYTYAENSSSRRAAQTTLFHIYHHLQEVLAPITPLLVEETWEHTPEA 838


>gi|309805561|ref|ZP_07699606.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165212|gb|EFO67450.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 928

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 196/469 (41%), Positives = 290/469 (61%), Gaps = 40/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L  T F MR N  VRE E  K W+D+ ++ +    N+G   F +HDGPP+ANG
Sbjct: 2   KIKDTLNLGNTKFKMRGNLPVREAEWQKQWEDNNLYEQRLKLNEGHPRFDMHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK ++ +   +VPGWD HGLPIE ++ +   +  +K+L  ++
Sbjct: 62  NIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVK--RKELNMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A + ++ Q   FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+G
Sbjct: 120 YRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS + LAEAE+EY +   + SI+  F+++        LL+    +  L +WT
Sbjct: 180 KKPVYWSWSSESTLAEAEVEYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+ VN K  Y++V++                       D+K    +VA+ 
Sbjct: 233 TTPWTIPANEAICVNPKFDYSLVQVN----------------------DKK---FVVATG 267

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    V+ K+  GS++E  +  HP+ +++  +VI G ++T + GTGLVHT
Sbjct: 268 LLEKVAQEIGWDEYHVV-KSFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APG G +D+   LKY LPI SPVD +G +T+E  + +G+    D +  +++ L    +L+
Sbjct: 326 APGFGADDFNVGLKYNLPIFSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 385 KLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 97/158 (61%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +DQY   +L  ++    E+Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
               RRS QTV+   L+ + +++ PILPH  E++W  L
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYL 770


>gi|296818499|ref|XP_002849586.1| isoleucyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238840039|gb|EEQ29701.1| isoleucyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 1517

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 204/480 (42%), Positives = 287/480 (59%), Gaps = 41/480 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R  AL  + +  K   D     +  ++    +F LHDGPPYANG L
Sbjct: 518 WSSTLKLPKSTFPPRI-ALADQAKYLKRCSDDLYSWQQRNRPATASFTLHDGPPYANGEL 576

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDE-----DAKKDLT 220
           H+GHALNKILKDII R +L +  +V+YVPGWDCHGLPIELK LQ   E      A +D  
Sbjct: 577 HIGHALNKILKDIICRVQLAKGKRVQYVPGWDCHGLPIELKALQGQKELGDLRSAGRD-G 635

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
            +++R+ A + A+ TV  QM  F+++ +  DW+N Y T++ ++E  Q+ VF +M  +G I
Sbjct: 636 AAQIRSAARQLAEKTVSQQMEGFRKWAIMGDWDNAYTTMNKDFERRQLGVFLEMVEKGLI 695

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPST--SGLLNEFLPDLG 338
           YR  KPV+WSPSS TALAEAELEY E HVS +    F + + P     + LL+    D+ 
Sbjct: 696 YRRYKPVYWSPSSGTALAEAELEYKEDHVSTAALVKFALENLPARIRENSLLSN--SDIS 753

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
             +WTTTPWT+PANAA+AV+  L+Y +V+  S   G      ++      +L D  KV +
Sbjct: 754 AVIWTTTPWTLPANAALAVSPTLEYTIVD--SAHHGKLLVAQSRLQYLQELLDDNLKVIV 811

Query: 399 --IVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGT 456
             I+ S+L+ +           +    G + E+ R            +I  D++T ++G+
Sbjct: 812 PAILGSELLDS---------TYRPHFKGPEAESQR------------IIAADFVTADAGS 850

Query: 457 GLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTE-----EAGKFSGLDVLGDGNVAVV 511
           G+VH APGHG EDY T L  G+P  +PVD EG+FT+     +    +G  VLGDGN+AV+
Sbjct: 851 GIVHCAPGHGMEDYETCLALGIPAYAPVDGEGRFTQATMPTQPDLLTGKAVLGDGNIAVI 910

Query: 512 KYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
           KYL E+  L+ +  Y+HKYPYDWR+K P I RATEQWFA V   R  A+ A+  V+++PP
Sbjct: 911 KYLSEKGILMHKHAYKHKYPYDWRSKLPVIIRATEQWFADVGDIRGEAIQALQSVQFIPP 970



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 3/166 (1%)

Query: 573  EAPGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
            E P Y   G D LRLW +  DYT DV+IG QVL+ ++    K R T + LLG L  +   
Sbjct: 1176 EVPIYDALGPDALRLWAAGSDYTKDVVIGQQVLKAVNISLHKFRVTFKLLLGALQGFDPK 1235

Query: 630  NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
            N + Y+ L  ID+ AL QL N+VK  +E+ +  +FFK    + ++  ++ S FY +  KD
Sbjct: 1236 NEVPYESLYAIDKIALLQLHNLVKTSQEAIDKMEFFKAVTAMNKWANLEFSAFYIEAIKD 1295

Query: 690  RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
            RLY       +RR+ QT L      I  ++ PI+P L E+ W++ P
Sbjct: 1296 RLYADSENGISRRAAQTTLFHIYTHIQTLLGPIVPLLVEETWEHTP 1341


>gi|312874547|ref|ZP_07734572.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|329921150|ref|ZP_08277672.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|311089938|gb|EFQ48357.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|328934788|gb|EGG31279.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 928

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 196/469 (41%), Positives = 290/469 (61%), Gaps = 40/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L  T F MR N  VRE E  K W+D+ ++ +    N+G   F +HDGPP+ANG
Sbjct: 2   KIKDTLNLGNTKFKMRGNLPVREAEWQKQWEDNDLYEQRLKLNEGHPRFDMHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK ++ +   +VPGWD HGLPIE ++ +   +  +K+L  ++
Sbjct: 62  NIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVK--RKELNMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A + ++ Q   FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+G
Sbjct: 120 YRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS + LAEAE+EY +   + SI+  F+++        LL+    +  L +WT
Sbjct: 180 KKPVYWSWSSESTLAEAEVEYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+ VN K  Y++V++                       D+K    +VA+ 
Sbjct: 233 TTPWTIPANEAICVNPKFDYSLVQVN----------------------DKK---FVVATG 267

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    V+ K+  GS++E  +  HP+ +++  +VI G ++T + GTGLVHT
Sbjct: 268 LLEKVAQEIGWDEYHVV-KSFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APG G +D+   LKY LPI SPVD +G +T+E  + +G+    D +  +++ L    +L+
Sbjct: 326 APGFGADDFNVGLKYNLPIFSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 385 KLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 97/158 (61%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +DQY   +L  ++    ++Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLDAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
               RRS QTV+   L+ + +++ PILPH  E++W  L
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYL 770


>gi|309808603|ref|ZP_07702495.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|325913434|ref|ZP_08175800.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|308168077|gb|EFO70203.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|325477203|gb|EGC80349.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 928

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 196/469 (41%), Positives = 290/469 (61%), Gaps = 40/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L  T F MR N  VRE E  K W+D+ ++ +    N+G   F +HDGPP+ANG
Sbjct: 2   KIKDTLNLGNTKFKMRGNLPVREAEWQKQWEDNDLYEQRLKLNEGHPRFDMHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK ++ +   +VPGWD HGLPIE ++ +   +  +K+L  ++
Sbjct: 62  NIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVK--RKELNMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A + ++ Q   FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+G
Sbjct: 120 YRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS + LAEAE+EY +   + SI+  F+++        LL+    +  L +WT
Sbjct: 180 KKPVYWSWSSESTLAEAEVEYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+ VN K  Y++V++                       D+K    +VA+ 
Sbjct: 233 TTPWTIPANEAICVNPKFDYSLVQVN----------------------DKK---FVVATG 267

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    V+ K+  GS++E  +  HP+ +++  +VI G ++T + GTGLVHT
Sbjct: 268 LLEKVAQEIGWDEYHVV-KSFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APG G +D+   LKY LPI SPVD +G +T+E  + +G+    D +  +++ L    +L+
Sbjct: 326 APGFGADDFNVGLKYNLPIFSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 385 KLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 97/158 (61%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +DQY   +L  ++    E+Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
               RRS QTV+   L+ + +++ PILPH  E++W  L
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYL 770


>gi|302191489|ref|ZP_07267743.1| isoleucyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309806571|ref|ZP_07700571.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308167050|gb|EFO69229.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 928

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 196/469 (41%), Positives = 290/469 (61%), Gaps = 40/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L  T F MR N  VRE E  K W+D+ ++ +    N+G   F +HDGPP+ANG
Sbjct: 2   KIKDTLNLGNTKFKMRGNLPVREAEWQKQWEDNNLYEQRLKLNEGHPRFDMHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK ++ +   +VPGWD HGLPIE ++ +   +  +K+L  ++
Sbjct: 62  NIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVK--RKELNMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A + ++ Q   FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+G
Sbjct: 120 YRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS + LAEAE+EY +   + SI+  F+++        LL+    +  L +WT
Sbjct: 180 KKPVYWSWSSESTLAEAEVEYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+ VN K  Y++V++                       D+K    +VA+ 
Sbjct: 233 TTPWTIPANEAICVNPKFDYSLVQVN----------------------DKK---FVVATG 267

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    V+ K+  GS++E  +  HP+ +++  +VI G ++T + GTGLVHT
Sbjct: 268 LLEKVAQEIGWDEYHVV-KSFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APG G +D+   LKY LPI SPVD +G +T+E  + +G+    D +  +++ L    +L+
Sbjct: 326 APGFGADDFNVGLKYNLPIFSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 385 KLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 97/158 (61%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +DQY   +L  ++    E+Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
               RRS QTV+   L+ + +++ PILPH  E++W  L
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYL 770


>gi|325911859|ref|ZP_08174263.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325476365|gb|EGC79527.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 928

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 196/469 (41%), Positives = 290/469 (61%), Gaps = 40/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L  T F MR N  VRE E  K W+D+ ++ +    N+G   F +HDGPP+ANG
Sbjct: 2   KIKDTLNLGNTKFKMRGNLPVREAEWQKQWEDNNLYEQRLKLNEGHPRFDMHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK ++ +   +VPGWD HGLPIE ++ +   +  +K+L  ++
Sbjct: 62  NIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVK--RKELNMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A + ++ Q   FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+G
Sbjct: 120 YRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS + LAEAE+EY +   + SI+  F+++        LL+    +  L +WT
Sbjct: 180 KKPVYWSWSSESTLAEAEVEYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+ VN K  Y++V++                       D+K    +VA+ 
Sbjct: 233 TTPWTIPANEAICVNPKFDYSLVQVN----------------------DKK---FVVATG 267

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    V+ K+  GS++E  +  HP+ +++  +VI G ++T + GTGLVHT
Sbjct: 268 LLEKVAQEIGWDEYHVV-KSFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APG G +D+   LKY LPI SPVD +G +T+E  + +G+    D +  +++ L    +L+
Sbjct: 326 APGFGADDFNVGLKYNLPIFSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 385 KLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 97/158 (61%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +DQY   +L  ++    E+Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
               RRS QTV+   L+ + +V+ PILPH  E++W  L
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKVLTPILPHTMEEIWSYL 770


>gi|227877331|ref|ZP_03995404.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256842893|ref|ZP_05548381.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|293381727|ref|ZP_06627708.1| isoleucine--tRNA ligase [Lactobacillus crispatus 214-1]
 gi|312977589|ref|ZP_07789336.1| isoleucine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|423317798|ref|ZP_17295695.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus FB049-03]
 gi|423321135|ref|ZP_17299007.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus FB077-07]
 gi|227863187|gb|EEJ70633.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256614313|gb|EEU19514.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|290921774|gb|EFD98795.1| isoleucine--tRNA ligase [Lactobacillus crispatus 214-1]
 gi|310895328|gb|EFQ44395.1| isoleucine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|405596458|gb|EKB69794.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus FB077-07]
 gi|405597734|gb|EKB70985.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus FB049-03]
          Length = 933

 Score =  367 bits (942), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 201/477 (42%), Positives = 283/477 (59%), Gaps = 50/477 (10%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  VRE E  K W+D++++ +    N+G+  F LHDGPP+ANG
Sbjct: 2   RIKDTLNLGKTKFKMRGNLPVREAEWQKEWEDNKLYEQRLKLNEGKPRFDLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPS 222
           N+HMGHALNKI KDII RYK +  Y   YVPGWD HGLP+E ++  Q +D   +K +  +
Sbjct: 62  NIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLPVEQQLAKQGVD---RKTMDRA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           K R    ++A+  V+ QMA FKR GV ADW+NPY+TL  ++EA +I VFG+M  +GYIY+
Sbjct: 119 KYRELCRQYAEEQVQKQMADFKRLGVMADWDNPYITLQHDFEAQEIRVFGEMYKKGYIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WS SS + LAEAE+EY +    R IY  F +        G+L+    D+ L +W
Sbjct: 179 GLKPVYWSWSSESTLAEAEVEYHDIKSPR-IYVAFPIKDG----KGILDS---DVSLVIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N  + VN +  Y++VE+                       D KK   ++ S
Sbjct: 231 TTTPWTIPSNVGITVNPRFDYSLVEV-----------------------DGKKY--VIGS 265

Query: 403 DLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNR----QCPVVIGGDYITTESGTG 457
           D +P +    G K   + K L G+D +   Y HP+  +    Q  +V+   Y+T + GTG
Sbjct: 266 DRLPAIAEDLGWKDYKVLKQLKGTDFDGMTYKHPLYGKTGVGQYGLVMNDTYVTDDDGTG 325

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLG----DGNVAVVKY 513
           LVH A G G++DY    KYG+P+ SP+D +G+FT++       D++G    D N  V   
Sbjct: 326 LVHNATGFGEDDYRVGQKYGIPVFSPMDAQGRFTKD---IPDPDLVGMFYDDANKVVADK 382

Query: 514 LDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L +  +L+    + H YP+DWRTKKP +FRAT QWFAS+  FR   +D I Q  ++P
Sbjct: 383 LKKAGALLKLSFFTHSYPHDWRTKKPVVFRATTQWFASISKFRDQILDQIEQANFIP 439



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T RY+L N  D+    N ++Y D
Sbjct: 619 GAEIIRLWVAQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY   +L ++VK+   +Y+ + F  +F+ +  F+  DLS FY D AKD LY  G 
Sbjct: 679 LRSVDQYMEVKLNDLVKDCLAAYDKFDFTTVFKKVFNFVSNDLSAFYLDFAKDVLYIDGE 738

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S  RRS QTV+    + + +++ PILPH  E++W
Sbjct: 739 NSHDRRSMQTVIYDAAVKLAKILTPILPHTMEEIW 773


>gi|301769279|ref|XP_002920059.1| PREDICTED: LOW QUALITY PROTEIN: isoleucyl-tRNA synthetase,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 1059

 Score =  367 bits (942), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 198/474 (41%), Positives = 277/474 (58%), Gaps = 27/474 (5%)

Query: 99  EKKEEGRYKHTVDLPKTTF-GMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDG 157
           +    GRY+ TV LP+T+F  +       E EI +     +++    ++     F LHDG
Sbjct: 102 QSSNNGRYRDTVLLPQTSFPXLGRQQPDTELEIQQKCGFSELYSWQRERKVKTEFCLHDG 161

Query: 158 PPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKK 217
           PPYANG+ H+GHALNKILKDI NRY +++  K+ +VPGWDCHGLPIE+KVL  L   A+ 
Sbjct: 162 PPYANGDPHVGHALNKILKDIANRYHMMRGSKIHFVPGWDCHGLPIEIKVLSELGGKAQ- 220

Query: 218 DLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQ 277
           +L+  ++R KA  FA+  +K Q ++F R+G+ ADW N Y T D +YEA Q+ +F QM  +
Sbjct: 221 NLSAVEIRKKARSFAEEAIKKQRSAFIRWGIMADWTNCYHTFDRKYEAKQLRIFYQMYEK 280

Query: 278 GYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDL 337
           G IYR  KPV WSPSSRTALAEAELEY   HVSRS+Y  F ++   P    +++   P +
Sbjct: 281 GLIYRSYKPVFWSPSSRTALAEAELEYNPEHVSRSVYVKFPVLKPSPKLVSIIDGSSP-V 339

Query: 338 GLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVF 397
              VWTT PWT+PAN AV       YAVV               K SR G++        
Sbjct: 340 SFLVWTTQPWTIPANQAVCYMPDANYAVV---------------KCSRSGDLY------- 377

Query: 398 IIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
            I+A+D V ++ +   T   +  T +G DLEN    HP+   +   ++  +++T   GTG
Sbjct: 378 -ILAADKVTSVASALETTFEVISTFSGVDLENGTCAHPLIPDKASPLLPANHVTMTKGTG 436

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDE 516
           LVHTAP HG ED+  + ++ LP    VD++G FT+ AG +     VL +G   V+K L  
Sbjct: 437 LVHTAPAHGMEDFSVASQHNLPTDCLVDEDGVFTDVAGPELQNKAVLEEGTDVVIKMLQA 496

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              L+ EE   H YPYDWRTKKP + RA++QWF  +   +  A + + +VK++P
Sbjct: 497 SKHLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVHITDIKATAKELLKKVKFIP 550



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 113/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V + P VL    D   KLR TLR+ LGN+  +    +S+ 
Sbjct: 736 PPYGADVLRWWVAESNVFTEVTVSPSVLNAARDDISKLRNTLRFFLGNVAGFNPETDSVP 795

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I +SY+ Y F K+ ++++ F   +LSNFYF + KDRLY 
Sbjct: 796 VNDMYVIDQYMLHLLQDLANKITDSYKQYDFGKVVRLLRAFYTRELSNFYFSIIKDRLYC 855

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L+  L  +VR +APILPHLAE+V+Q++P  Y+ E  S    VF + 
Sbjct: 856 EHAGGPKRRSCQTALAEILDVVVRSLAPILPHLAEEVFQHIP--YSKEPRS----VFRTG 909

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 910 WIRTSSIWK 918


>gi|262045859|ref|ZP_06018823.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|260573818|gb|EEX30374.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 933

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 201/477 (42%), Positives = 283/477 (59%), Gaps = 50/477 (10%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  VRE E  K W+D++++ +    N+G+  F LHDGPP+ANG
Sbjct: 2   RIKDTLNLGKTKFKMRGNLPVREAEWQKEWEDNKLYEQRLKLNEGKPRFDLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPS 222
           N+HMGHALNKI KDII RYK +  Y   YVPGWD HGLP+E ++  Q +D   +K +  +
Sbjct: 62  NIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLPVEQQLAKQGVD---RKTMDRA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           K R    ++A+  V+ QMA FKR GV ADW+NPY+TL  ++EA +I VFG+M  +GYIY+
Sbjct: 119 KYRELCRQYAEEQVQKQMADFKRLGVMADWDNPYITLQHDFEAQEIRVFGEMYKKGYIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WS SS + LAEAE+EY +    R IY  F +        G+L+    D+ L +W
Sbjct: 179 GLKPVYWSWSSESTLAEAEVEYHDIKSPR-IYVAFPIKDG----KGILDS---DVSLVIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N  + VN +  Y++VE+                       D KK   ++ S
Sbjct: 231 TTTPWTIPSNVGITVNPRFDYSLVEV-----------------------DGKKY--VIGS 265

Query: 403 DLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNR----QCPVVIGGDYITTESGTG 457
           D +P +    G K   + K L G+D +   Y HP+  +    Q  +V+   Y+T + GTG
Sbjct: 266 DRLPAIAEDLGWKDYKVLKQLKGTDFDGMTYKHPLYGKTGVGQYGLVMNDTYVTDDDGTG 325

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLG----DGNVAVVKY 513
           LVH A G G++DY    KYG+P+ SP+D +G+FT++       D++G    D N  V   
Sbjct: 326 LVHNATGFGEDDYRVGQKYGIPVFSPMDAQGRFTKD---IPDPDLVGMFYDDANKVVADK 382

Query: 514 LDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L +  +L+    + H YP+DWRTKKP +FRAT QWFAS+  FR   +D I Q  ++P
Sbjct: 383 LKKAGALLKLSFFTHSYPHDWRTKKPVVFRATTQWFASISKFRDQILDQIEQANFIP 439



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T RY+L N  D+    N ++Y D
Sbjct: 619 GAEIIRLWVAQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY   +L ++VK+   +Y+ + F  +F+ +  F+  DLS FY D AKD LY  G 
Sbjct: 679 LRSVDQYMEVKLNDLVKDCLAAYDKFDFTTVFKKVFNFVSNDLSAFYLDFAKDVLYIDGE 738

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S  RRS QTV+    + + +++ PILPH  E++W
Sbjct: 739 NSHDRRSMQTVIYDAAVKLAKILTPILPHTMEEIW 773


>gi|259485657|tpe|CBF82864.1| TPA: hypothetical protein similar to isoleucine/valine tRNA
           synthetase (Broad) [Aspergillus nidulans FGSC A4]
          Length = 1000

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 209/480 (43%), Positives = 287/480 (59%), Gaps = 44/480 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R     +   + +  DD   + R     D   FVLHDGPPYANG+L
Sbjct: 12  WSSTLKLPKSTFPARVTPTDQTKYLKRCTDDLYAWQRRERPAD-RLFVLHDGPPYANGDL 70

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKD---LTPS 222
           H+GHALNKILKDII R +L    +VRYVPGWDCHGLPIELK L++  +DA+++   +  +
Sbjct: 71  HVGHALNKILKDIICRVQLGAGKRVRYVPGWDCHGLPIELKALEA-RKDAREEGGIVDAA 129

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
             R  A   A+ TVK QM  F+ + V ADW N + T+D ++E  Q+ +F +M  +G IYR
Sbjct: 130 VTRKVARNLAEKTVKKQMNGFRSFVVMADWENHWKTMDKDFEKRQLGIFREMVEKGLIYR 189

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL---PDLGL 339
             KPV+WSPS+ TALAEAELEY + HVS + +  F +V+ P   S L  + L    D+  
Sbjct: 190 RFKPVYWSPSTGTALAEAELEYKDDHVSTAAFVKFPLVTVP---SHLKRDPLLQGKDISA 246

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PANAA+A++   QY +VE        SAA                  +++
Sbjct: 247 VIWTTTPWTLPANAAIAIHPLFQYTIVE--------SAAHG----------------YLL 282

Query: 400 VASDLVPTLEAKWGTKL-VIKKTLAGSDLENCRYVHPV---DNRQCPVVIGGDYITTESG 455
           VA   +  LE      L VI  ++ GS+L +     P+    N +   +I  D++T +SG
Sbjct: 283 VAQSRLEYLEFVLKEDLSVIVPSILGSELVDNTTYQPLFKAANSEPQPLIAADFVTADSG 342

Query: 456 TGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAV 510
           TGLVH APGHG EDY   L  G+   +PVDD GKFT+ A      + SG  VL DGNVAV
Sbjct: 343 TGLVHCAPGHGMEDYEACLSRGILAFAPVDDHGKFTDLAMPDDPKRLSGKSVLADGNVAV 402

Query: 511 VKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++Y++ Q  L+ +  Y H+YPYDWR+K+P I RATEQWFA V   + +A+ A+  V++VP
Sbjct: 403 LEYIESQGQLLFQHRYGHRYPYDWRSKQPIIIRATEQWFADVADIQSSALKALDDVQFVP 462



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 90/160 (56%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
           G D LRLW +S DYT DV++G QVL+ +     K R T + LLG L D+R  N + YD L
Sbjct: 675 GPDALRLWAASSDYTRDVVMGKQVLQTVHTSLHKYRVTFKLLLGALSDFRPENKVQYDQL 734

Query: 638 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
            ++D+ AL  L  +    R + E ++F+K    + R+  ++ S FY +  KDRLYT    
Sbjct: 735 LLVDRIALLHLSEMTLAARTACEKFEFYKAVSAVNRWANLEFSAFYMEAIKDRLYTYAEN 794

Query: 698 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           S +RR+ QT L      +  V+ PI P L E+ W++ P A
Sbjct: 795 SPSRRAAQTTLFHIYQHLQEVLGPITPLLVEETWEHTPEA 834


>gi|315653381|ref|ZP_07906303.1| isoleucine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|315489306|gb|EFU78946.1| isoleucine--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 928

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 196/469 (41%), Positives = 289/469 (61%), Gaps = 40/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L  T F MR N  VRE E  K W+D+ ++ +    N+G   F +HDGPP+ANG
Sbjct: 2   KIKDTLNLGNTKFKMRGNLPVREAEWQKQWEDNDLYEQRLKLNEGHPRFDMHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK ++ +   +VPGWD HGLPIE ++ +      +K+L  ++
Sbjct: 62  NIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKK--GVKRKELNMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A + ++ Q   FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+G
Sbjct: 120 YRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS + LAEAE+EY +   + SI+  F+++        LL+    +  L +WT
Sbjct: 180 KKPVYWSWSSESTLAEAEVEYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+ VN K  Y++V++                       D+K    +VA+ 
Sbjct: 233 TTPWTIPANEAICVNPKFDYSLVQVN----------------------DKK---FVVATG 267

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    V+ K+  GS++E  +  HP+ +++  +VI G ++T + GTGLVHT
Sbjct: 268 LLEKVAQEIGWDEYHVV-KSFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APG G +D+   LKY LPI SPVD +G +T+E  + +G+    D +  +++ L    +L+
Sbjct: 326 APGFGADDFNVGLKYNLPIFSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 385 KLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 97/158 (61%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +DQY   +L  ++    E+Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
               RRS QTV+   L+ + +++ PILPH  E++W  L
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYL 770


>gi|254782434|sp|B8CSC1.1|SYI_SHEPW RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|212557957|gb|ACJ30411.1| Isoleucyl-tRNA synthetase, class Ia [Shewanella piezotolerans WP3]
          Length = 940

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 194/471 (41%), Positives = 285/471 (60%), Gaps = 32/471 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVAD-KNDGENFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W++  ++ ++ + + D + F+LHDGPPYANG+
Sbjct: 4   YKSTLNLPETEFPMRGNLANREPEMLKSWNEKGLYQQIRESRKDSKPFILHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH++NKILKDII + K +  +   Y+PGWDCHGLPIELKV Q + +   K +T S+ 
Sbjct: 64  IHIGHSVNKILKDIIIKSKTMSGFDAPYIPGWDCHGLPIELKVEQKVGKPGHK-VTASEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V  Q   F R GV+ADW NPYLT+D   EA  +    ++   G++++G 
Sbjct: 123 RQKCREYAAKQVDGQRDDFIRLGVFADWQNPYLTMDYNTEANIVRSLSKVIDSGHLHKGV 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL-LNEFLPDLGLAVWT 343
           KPVHW     +ALAEAE+EY E  +S +I   F  V  P   +   L E+   + + +WT
Sbjct: 183 KPVHWCTDCGSALAEAEVEY-EDKMSPAIDVAFTAVDKPALLAKFGLTEYAHPISMVIWT 241

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A++V  +L+Y +VE+                     +KD +   +++A +
Sbjct: 242 TTPWTLPANRALSVAGQLEYTLVEM---------------------VKDGQTQALVLAQE 280

Query: 404 LVPTLEAKWG--TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           LV +   ++G  T  V+   L GS+LE  R+ HP  +   PV++ G+++T ESGTG+VHT
Sbjct: 281 LVESCVERFGAETHKVLANVL-GSELELLRFNHPFYDFDVPVIL-GEHVTVESGTGVVHT 338

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQ+D+V   KYGL + +PV D G +  +   F+G  V    N AVV  L+E+ +L+
Sbjct: 339 APGHGQDDFVVGQKYGLEVANPVGDNGVYKADTEIFAGQHVF-KANKAVVALLEEKGALL 397

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
                 H YP+ WR K P IFRAT QWF S++  G R  A+  I + +W+P
Sbjct: 398 NHVAINHSYPHCWRHKTPIIFRATPQWFISMDQKGLRTQALSEIEKTQWIP 448



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 121/206 (58%), Gaps = 11/206 (5%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    ++G V  + PQ      GAD+LRLWV++ DY+G++ +  ++L++ +D Y
Sbjct: 598 TVDGKGRKMSKSVGNV--IAPQHVTNKLGADILRLWVAATDYSGEMTVSDEILKRSADAY 655

Query: 610 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL N++ +    + ++ +D+  +D++ + +   + + + E+Y+ Y F  + 
Sbjct: 656 RRIRNTARFLLANINGFNPETDMVAVEDMVALDRWVVRRAAALQQELLEAYDQYNFHLVT 715

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + +F  V+L +FY D+ KDR YT    S  RRSCQ+ L     ++VR IAP+L   A+
Sbjct: 716 QKLMQFCSVELGSFYLDIIKDRQYTAKDDSNARRSCQSALYLISEAMVRWIAPVLSFTAD 775

Query: 729 DVWQNLPFAYTLEDGSAAEFVFESKW 754
           ++W+ LP       G   EFVF   W
Sbjct: 776 EIWKLLP-------GERGEFVFTETW 794


>gi|312872405|ref|ZP_07732474.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311091987|gb|EFQ50362.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
          Length = 928

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 196/469 (41%), Positives = 290/469 (61%), Gaps = 40/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L  T F MR N  VRE E  K W+D+ ++ +    N+G   F +HDGPP+ANG
Sbjct: 2   KIKDTLNLGNTKFKMRGNLPVREAEWQKQWEDNDLYEQRLKLNEGHPRFDMHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK ++ +   +VPGWD HGLPIE ++ +   +  +K+L  ++
Sbjct: 62  NIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVK--RKELNMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A + ++ Q   FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+G
Sbjct: 120 YRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS + LAEAE+EY +   + SI+  F+++        LL+    +  L +WT
Sbjct: 180 KKPVYWSWSSESTLAEAEVEYKDVE-ANSIFVAFKLIDG----KDLLD--TDNTYLIIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+ VN K  Y++V++                       D+K    +VA+ 
Sbjct: 233 TTPWTIPANEAICVNPKFDYSLVQVN----------------------DKK---FVVATG 267

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    V+ K+  GS++E  +  HP+ +++  +VI G ++T + GTGLVHT
Sbjct: 268 LLEKVAQEIGWDEYNVV-KSFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APG G +D+   LKY LPI SPVD +G +T+E  + +G+    D +  +++ L    +L+
Sbjct: 326 APGFGADDFNVGLKYNLPIFSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 385 KLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 97/158 (61%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +DQY   +L  ++    E+Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLEAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
               RRS QTV+   L+ + +++ PILPH  E++W  L
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYL 770


>gi|119488654|ref|XP_001262777.1| isoleucyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
 gi|119410935|gb|EAW20880.1| isoleucyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
          Length = 1010

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 208/477 (43%), Positives = 279/477 (58%), Gaps = 38/477 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R     +   + +  D+   + R     D   FVLHDGPPYANG+L
Sbjct: 12  WSSTLKLPKSTFPARVTPADQTKYLQRCTDELYAWQRRERPAD-RPFVLHDGPPYANGDL 70

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDE--DAKKDLTPSK 223
           H+GHALNKILKDII R +L +  +VRYVPGWDCHGLPIELK L+   E  +    +  + 
Sbjct: 71  HVGHALNKILKDIICRVQLAKGKRVRYVPGWDCHGLPIELKALELQKELGNTGGSIGAAA 130

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
           +R  A K A  TVK QM  F+ +GV ADW+  + T+D E+E  Q+ VF +M  +G IYR 
Sbjct: 131 IRRAARKLAGRTVKEQMKGFRSFGVMADWDGHWKTMDKEFEKRQLGVFREMVDKGLIYRR 190

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPS+ TALAEAELEY + HVS +    F + S PP  +      L DL   +WT
Sbjct: 191 FKPVYWSPSTGTALAEAELEYKDDHVSTAALVKFPLASVPPQLAQDPLVQLKDLSAVIWT 250

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PANA +AV+  L Y +V  QS   G                       +++A  
Sbjct: 251 TTPWTLPANAVIAVHESLDYMIV--QSDTHGQ----------------------LLIAQS 286

Query: 404 LVPTLEAKWGTKL-VIKKTLAGSDLENCRYVHPV----DNRQCPVVIGGDYITTESGTGL 458
               LE      L VI  ++ GS+L       P+    D +  P +I  D++T +SG+GL
Sbjct: 287 RFEYLEHMLKEDLTVIIPSIRGSELAEQTMYRPLFKSTDAKPQP-IIAADFVTADSGSGL 345

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKY 513
           VH APGHG +DY   +  G+P  +PVDD G+FT++A      + SG  VLG+G  AV++Y
Sbjct: 346 VHCAPGHGMDDYEACVPRGIPAFAPVDDHGRFTDKAMPSDPARLSGKSVLGEGTAAVLEY 405

Query: 514 LDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++ Q  L+ +  YEHKYPYDWR+K P I RATEQWFA V   R +A+ A+  VK+VP
Sbjct: 406 IESQGYLLAKHQYEHKYPYDWRSKLPIIIRATEQWFADVADIRNSAVKALEDVKFVP 462



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/164 (37%), Positives = 96/164 (58%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
           G D LR+W +S DYT DV+IG QVL+ ++    K R T + LLG L D+R  + + Y  L
Sbjct: 675 GPDALRMWAASSDYTRDVVIGKQVLQTVNTSLHKFRVTFKLLLGALSDFRPQDQLPYSQL 734

Query: 638 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
             +D+ AL  L  +V   +++ E+++F+K    + R+  +  S FY +  KDRLYT G +
Sbjct: 735 QQVDRMALLHLSEMVLTCQKACENFEFYKAVNAMNRWANLQFSAFYMEAIKDRLYTYGES 794

Query: 698 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLE 741
           S +RR+ QT L      +  ++API P L E+ W++ P A  L+
Sbjct: 795 STSRRAAQTTLFHIYNYLQEILAPITPLLVEETWEHTPEAIKLQ 838


>gi|442608795|ref|ZP_21023537.1| Isoleucyl-tRNA synthetase [Pseudoalteromonas luteoviolacea B = ATCC
           29581]
 gi|441749844|emb|CCQ09599.1| Isoleucyl-tRNA synthetase [Pseudoalteromonas luteoviolacea B = ATCC
           29581]
          Length = 941

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 195/473 (41%), Positives = 289/473 (61%), Gaps = 33/473 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YKHT++LP+T F MR N   REP++ K W +  ++ ++     G+  F+LHDGPPYANGN
Sbjct: 4   YKHTLNLPETEFPMRGNLAQREPKMLKAWYEQDLYGQIRSAKKGKTPFILHDGPPYANGN 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K L ++   YVPGWDCHGLPIEL+V + + +   K ++ ++ 
Sbjct: 64  IHLGHAVNKILKDIIVKSKTLSDFDAPYVPGWDCHGLPIELQVEKKVGKPGVK-VSAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  K+A   V+ Q A FKR GV+ DW+NPYLT++ ++EA  I V G++   G++++G 
Sbjct: 123 REECRKYAAKQVEGQKADFKRLGVFGDWDNPYLTMNFDFEANAIRVLGRIIKNGHLHKGA 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL----LNEFLPDLGLA 340
           KPVHW     +ALAEAE+EY +   S +I   F  V      S       +E    +  A
Sbjct: 183 KPVHWCTDCGSALAEAEVEYQDKQ-SPAIDVRFTFVDQAAIVSAFDMQAGHEGAGLVSTA 241

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AVAVNA L+YA+V++++  EG                   ++  +++
Sbjct: 242 IWTTTPWTLPANRAVAVNANLEYALVQVEN--EG-------------------QQQRLVL 280

Query: 401 ASDLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
            S+LV     ++G     +     G+ LE+ R  HP  +   PV++ GD++TT+SGTG+V
Sbjct: 281 GSELVKDAMDRFGFDHYHVLGYAKGAALEHLRVGHPFYDFDVPVIL-GDHVTTDSGTGIV 339

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHGQED+   L YGL + +PV   G + E+   F+G  V    N  V++ L E+ +
Sbjct: 340 HTAPGHGQEDFTAGLSYGLEVANPVGANGVYLEDTPIFAGQHVF-KANDNVIELLKEKGA 398

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           L+  +  +H YP+ WR K P IFRAT QWF S++  G RQ ++  I + +W+P
Sbjct: 399 LLRHKALKHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRQNSLSEIKKTQWLP 451



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 112/195 (57%), Gaps = 11/195 (5%)

Query: 562 AIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 620
           ++G V  + PQ+     GAD+LRLWV+S DYT ++ +  ++ ++ +D YR++R T RYLL
Sbjct: 611 SLGNV--ISPQDVMNKLGADILRLWVASTDYTAEMTVSDEIFKRAADRYRRIRNTGRYLL 668

Query: 621 GNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDL 679
            NL  +    + I+ D+L  +D++ L +   +   + +SY++Y+  ++ Q +  F   +L
Sbjct: 669 ANLSGFNPETDMIATDELVELDRWILARAAELQVELIKSYDNYKTLEVTQKLMNFCTGEL 728

Query: 680 SNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT 739
            +FY DV KDR YT    S  RRSCQT L     ++ R +API+   A+++W+ LP    
Sbjct: 729 GSFYLDVIKDRQYTAKKDSHARRSCQTALYHIAEAMTRWMAPIMSFTAQEIWELLP---- 784

Query: 740 LEDGSAAEFVFESKW 754
              G  + FVF   W
Sbjct: 785 ---GKRSAFVFTETW 796


>gi|303247249|ref|ZP_07333523.1| isoleucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302491408|gb|EFL51296.1| isoleucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 940

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 205/471 (43%), Positives = 277/471 (58%), Gaps = 36/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLR-VADKNDGENFVLHDGPPYANGN 164
           YK T+ LPKT+F M+AN   +EPE  K W ++ ++ + +A + D   +VLHDGPPYANG+
Sbjct: 5   YKKTLKLPKTSFPMKANLKEKEPETLKFWAENNIYNQMLAAREDAPRYVLHDGPPYANGH 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKDII + + +   +  YVPGWDCHGLPIE KV Q L    K +L    +
Sbjct: 65  LHMGHALNKILKDIIVKSRHMAGNQAPYVPGWDCHGLPIEHKVSQELTAKGKTNLPAITV 124

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A   V  Q   FKR GV+ DW++PYLT+ P YEAA          +G +YRGK
Sbjct: 125 RRLCRDYATKFVDIQRKEFKRLGVFGDWDDPYLTMRPSYEAATALALCDFVEKGSVYRGK 184

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGL-AVWT 343
           KP+HW  S RTALAEAE+EY +   S S++  F +    P    +     P     A+WT
Sbjct: 185 KPIHWCLSCRTALAEAEVEYAD-ETSPSVFVRFPLPD--PKIKDVFPMADPARTYAAIWT 241

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P N AVA + +  YA+V       GDS                      ++A+ 
Sbjct: 242 TTPWTLPDNMAVAAHPEFDYALVAA-----GDSQ--------------------YVLAAQ 276

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ ++   +G T   +  T  GS LE  +  HP  +R+ P  +  DY+T ++GTGLVHTA
Sbjct: 277 LLESVRELFGWTDAKVLATAPGSALEGLKARHPFYDRESPFAL-ADYVTLDAGTGLVHTA 335

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG+EDY T L+YGL +LSP+DD G+F +    F+GL V  + N  V++ L E  +L+ 
Sbjct: 336 PGHGREDYDTGLRYGLDVLSPMDDAGRFLDVVPYFAGLTVW-EANPKVIEKLKEVGNLLA 394

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 570
           E    H YP+ WR K+P IFRAT QWF S+E    R  A+ AI G+V+W+P
Sbjct: 395 ERKIRHSYPHCWRCKEPVIFRATTQWFISMEVGDLRNRALAAIDGEVEWIP 445



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 101/169 (59%), Gaps = 2/169 (1%)

Query: 569 VPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 627
           + PQE    +GA++LRLW S+VDY  D+ +  ++L ++ + YR++R T R++LGNL D+ 
Sbjct: 618 IEPQEIIDKHGAEILRLWTSAVDYRDDIRLSEEILSRLVEAYRRIRNTCRFVLGNLSDFD 677

Query: 628 VG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
              N ++   +  +D YA+         I E+YE+Y+F K+F  +    + DLS FY D+
Sbjct: 678 PAVNDVAPQSMLPLDSYAVDTAARAHARIAEAYEAYEFHKVFHALHNLCVTDLSAFYLDI 737

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
            KDRLY   T S  RRS Q  L   L  ++R +APIL   AE+V+++ P
Sbjct: 738 LKDRLYVSATDSLERRSAQAALWRILRVLLRDMAPILSFTAEEVFRHTP 786


>gi|328954555|ref|YP_004371889.1| isoleucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328454879|gb|AEB10708.1| Isoleucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 933

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 197/468 (42%), Positives = 276/468 (58%), Gaps = 34/468 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRV-ADKNDGENFVLHDGPPYANGN 164
           +K T++LPKT F M+AN   REPEI + W D  ++ R+ A   +   ++LHDGPPYANGN
Sbjct: 5   FKATLNLPKTAFPMKANLARREPEILERWADLNLYSRLRAQGQERPRYILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K +  ++  Y PGWDCHGLPIE +V + L +  +  L+  ++
Sbjct: 65  IHLGHALNKILKDIIIKSKQMSGFECPYTPGWDCHGLPIEHQVDKELKKK-RLHLSQLEV 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   +  Q   F R GV  DW NPYLT+  +Y A  I  +G ++L G +YR K
Sbjct: 124 RQKCREYALKYIDIQRRDFMRLGVLGDWFNPYLTMANDYAAQIIAEYGAIALAGGVYRSK 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPVHW  S  TALAEAE+EY E H + SI+  F ++        +L  +   + L +WTT
Sbjct: 184 KPVHWCASCHTALAEAEVEY-EDHRTISIFVKFPLLDDLSGDYPVLTNY--PVFLIIWTT 240

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+AVN +  YA V++                          +   I+A DL
Sbjct: 241 TPWTLPANLAIAVNPQFDYAAVQV-------------------------GEEIYILARDL 275

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
              +    G K      ++   LE  R  HP  +RQ  V++  DY+T E+G+GLVH APG
Sbjct: 276 AAGVLGTLGLKGKEVAIISAQKLEGRRCRHPWIDRQSQVIL-ADYVTLEAGSGLVHIAPG 334

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HGQEDY +  +Y L   SPVDD+G+F  E  +F+GL V  D N  +++ L ++ +L+   
Sbjct: 335 HGQEDYESGRRYHLEAYSPVDDDGRFLPEVPEFAGLRVW-DANPGIIELLQQRGALLGAS 393

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASV--EGFRQAAMDAIGQVKWVP 570
            + H YP+ WR K+P IFRATEQWF S+     R  A++AI QV+W+P
Sbjct: 394 EFSHSYPHCWRCKQPIIFRATEQWFISMGANNLRTRALEAINQVEWIP 441



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 114/189 (60%), Gaps = 4/189 (2%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    ++G +  + PQ+    YGA++LRLWVS+ DY  +V +  Q+L+Q+++ Y
Sbjct: 596 AVDGEGKKMSKSLGNI--IAPQDVIQEYGAEILRLWVSAEDYRDEVRLSDQILKQLTEAY 653

Query: 610 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R+LR T R+LLGNL D+      +S      +D+  L  L  +++ +RE+Y+ ++F  ++
Sbjct: 654 RRLRNTARFLLGNLFDFDPPRHYVSPQQREELDRLTLCWLAKLIQRVREAYDRFEFHVVY 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
             + +F  V+LS  Y D+ KDRLY     S  RRS Q+ L   LLS+  ++AP+L   AE
Sbjct: 714 HSLHQFCAVELSTLYLDILKDRLYISRPDSSERRSAQSTLYDLLLSLTTLMAPVLSFTAE 773

Query: 729 DVWQNLPFA 737
           ++W  LP A
Sbjct: 774 EIWGYLPKA 782


>gi|269122525|ref|YP_003310702.1| isoleucyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268616403|gb|ACZ10771.1| isoleucyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 926

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 200/474 (42%), Positives = 289/474 (60%), Gaps = 40/474 (8%)

Query: 101 KEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           +E+  Y  T++L KT+F M+A+   +EP + + W   +++ +   +  G+ F+LHDGPPY
Sbjct: 2   EEKKDYAATLNLLKTSFKMKASLPNKEPLLLRDWQKKKIYEKTLGRF-GKKFILHDGPPY 60

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG+LH+GHA NKILKDII RYK L+ Y   YVPGWD HGLPIELKV ++L  D  K ++
Sbjct: 61  ANGDLHVGHAENKILKDIIMRYKRLRGYDAPYVPGWDTHGLPIELKVTEALG-DKVKTMS 119

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
           P ++R +  K+A   V+ Q A F R G+  +W NPY+TL PEYEA ++ VF ++   GYI
Sbjct: 120 PIEIRKECRKYALKWVEKQKAEFIRLGIMGEWENPYITLIPEYEAEELRVFKEIYNNGYI 179

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA 340
           Y+G KPV+WSPS+ TALAEAE+EY +  VS SIY             G     L +  + 
Sbjct: 180 YKGLKPVYWSPSTETALAEAEIEY-QDVVSPSIYVKMDGEQDLKDKLG-----LDEAAIV 233

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN  ++++A+  Y V                 K+  GN+L         +
Sbjct: 234 IWTTTPWTLPANLGISLHAEFDYGVY----------------KTEKGNLL---------L 268

Query: 401 ASDLVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           A +L  T   E +     +IK+ + G++L+N  Y HP  +R   V++ GD++T E+GTG 
Sbjct: 269 AKELAETAFKEMEIENYELIKE-VKGAELDNTHYKHPFIDRTGLVML-GDHVTLEAGTGA 326

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQM 518
           VHTAPGHG +DY+   KY + ILSP+DD+G FT+  GK+ G+      N  + + +    
Sbjct: 327 VHTAPGHGVDDYLVGQKYNIGILSPIDDKGHFTKAGGKYEGM-FYKKANKFISEDIKASG 385

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            L+ME+  +H YP+DWR+KKP I+RATEQWF  VE    R+ A+  +  V ++P
Sbjct: 386 HLLMEKELKHSYPHDWRSKKPVIYRATEQWFIRVEEGDLREKALTVLKDVNFIP 439



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/202 (41%), Positives = 122/202 (60%), Gaps = 15/202 (7%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +    YGAD+LRLWV+SVDY  DV I   +L+Q+SD YR++R T R++LGN+ D+   
Sbjct: 614 PSEIINQYGADILRLWVASVDYREDVRISDNILKQVSDSYRRIRNTARFILGNISDFDYK 673

Query: 630 NS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
           N  +S++D+  +D++AL +LE +   + E YE Y+F+ +F  IQ F  +++S FY D+ K
Sbjct: 674 NDKVSFEDMYEVDKWALNKLERLKNKVEEYYEKYEFYNLFNEIQYFCGIEMSAFYLDIIK 733

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 748
           DRLY   T S  RRS QTV+   L  +VR IAP+L   AE++W+ +P     E     E 
Sbjct: 734 DRLYVEKTDSKLRRSAQTVMVEILEFLVRAIAPVLSFTAEEIWEKMP-----ETLREEES 788

Query: 749 VFESKW---------PVLDEKW 761
           V  ++W           LDEKW
Sbjct: 789 VHLAQWVAAKPEYLDNALDEKW 810


>gi|343428996|emb|CBQ72570.1| probable ISM1-isoleucine--tRNA ligase, mitochondrial [Sporisorium
           reilianum SRZ2]
          Length = 1089

 Score =  366 bits (940), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 213/529 (40%), Positives = 295/529 (55%), Gaps = 87/529 (16%)

Query: 97  EGEKKEEG--RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQV-----FLRVADKNDG 149
           E   K++G   + HT+ LP T FG+RANA  R+    KL+ D        + R      G
Sbjct: 72  EASPKDKGSKEFSHTLQLPNTPFGIRANAAQRD----KLFYDRTCGELYQWQRARSDASG 127

Query: 150 ENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQ 209
           E FV HDGPPYANGNLH GHALNKILKDI NRY++L+  +V Y+PGWDCHGLPIE K L 
Sbjct: 128 E-FVFHDGPPYANGNLHCGHALNKILKDITNRYQVLRGKRVHYMPGWDCHGLPIEAKALA 186

Query: 210 SLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNN--PYLTLDPEYEAAQ 267
           S+  D +  L P ++R +A   A   ++ Q + F ++G+ ADW+N   Y TLDP YEA Q
Sbjct: 187 SMSADQRHALDPREIRKRAHDEAVKAIETQKSEFSQFGIMADWSNDATYRTLDPGYEARQ 246

Query: 268 IEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTS 327
           + VFG+M  +G IYR  +PV+WSPS+RTALAE+ELEY E H+S+++Y  F++ +     S
Sbjct: 247 LRVFGEMVRKGLIYRQYRPVYWSPSNRTALAESELEYREDHLSKAVYVAFKLTAG----S 302

Query: 328 GLLNEF------LPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPAN 381
            LL +         DL   +WTTTPW++P+N A+ VN  L Y++V  +S  EG       
Sbjct: 303 KLLRKLGENTAVAQDLHAIIWTTTPWSLPSNMAINVNPDLDYSIVR-RSGSEGH------ 355

Query: 382 KKSRPGNVLKDQKKVFIIVASDLVPTLEA---------------KWGTKLVIKKTLAGSD 426
                          F IV +D V  LE+               K G    I + + G+D
Sbjct: 356 ---------------FYIVGNDRVEALESLPSSLSDEQGAESTQKLGPLEEIVR-IRGTD 399

Query: 427 LENCRYVHPVD--NRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL----PI 480
           L +  Y  P+   N     ++  DY+T  SGTGLVH+AP HG EDY    + G      I
Sbjct: 400 LSDSVYRSPLSAPNSSARPILMADYVTALSGTGLVHSAPAHGAEDYQIWKQQGRLQRDGI 459

Query: 481 LSPVDDEGKFTEE-------------------AGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
            SPV+DEG+++ +                     +  G +VLG+G   V+  L E+ +L+
Sbjct: 460 YSPVNDEGRYSSDILQLDQSSADDGSSNEQGLGHRLVGKEVLGEGAQEVMAILKERGALV 519

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             +   HKYPYDWR+K+P I RAT QWFA+++  +Q A+ A+  V +VP
Sbjct: 520 SAQTLRHKYPYDWRSKQPVIVRATAQWFANLDDIKQQAIQALDDVTFVP 568



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 2/191 (1%)

Query: 573 EAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSI 632
           + P YG DVLRLWV+  D+T D  IG  ++ + ++  RKLR T R++L N+       ++
Sbjct: 763 DEPAYGIDVLRLWVARSDFTTDPPIGNVIIHKTAETLRKLRNTARFMLANVPASGQVATL 822

Query: 633 SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLY 692
               + ++D++ + +L  + +    SYE+Y F ++ + +  F    LSN Y DV KD LY
Sbjct: 823 DKSKMRLLDRFVMQELYQLERACAASYEAYDFAQVVRRLTEFTNGTLSNLYLDVGKDSLY 882

Query: 693 TGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV--WQNLPFAYTLEDGSAAEFVF 750
                +  RR    V+   L ++  ++API+P L E+V  ++N   +   E    +  VF
Sbjct: 883 LDLLDNERRRMMVAVIDQILRTMTGIMAPIVPFLCEEVFHFRNGASSDPAEGTVGSPSVF 942

Query: 751 ESKWPVLDEKW 761
            + WP +DE W
Sbjct: 943 SAGWPEVDECW 953


>gi|365925130|ref|ZP_09447893.1| isoleucyl-tRNA synthetase [Lactobacillus mali KCTC 3596 = DSM
           20444]
 gi|420266445|ref|ZP_14768911.1| isoleucyl-tRNA ligase [Lactobacillus mali KCTC 3596 = DSM 20444]
 gi|394425359|gb|EJE98343.1| isoleucyl-tRNA ligase [Lactobacillus mali KCTC 3596 = DSM 20444]
          Length = 932

 Score =  366 bits (940), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 201/469 (42%), Positives = 282/469 (60%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  VRE E   +W++++V+ +    N+G+  FVLHDGPPYANG
Sbjct: 2   RIKETLNLGKTKFPMRGNLPVRELERQNVWEENKVYEKRQKLNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHA+NKI KD I R K +  ++  YVPGWD HGLPIE ++ ++  +  +K ++ ++
Sbjct: 62  NIHMGHAMNKISKDFIVRSKSMMGFRSPYVPGWDTHGLPIEQQLKKAGVD--RKSMSVAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R +  K+A   V  Q   FKR GV  +W+NPY+TLDP +EA ++ VFG+M+ +G IY+G
Sbjct: 120 FREECRKYALKQVDKQRKDFKRLGVAGEWDNPYVTLDPTFEAQEVRVFGKMAERGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +ALAEAE+EY +     + Y    +        G+L+    D  + VWT
Sbjct: 180 KKPVFWSWSSESALAEAEVEYHDVTSPSAFYGEHVV-----DGKGVLDN---DTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P +  + V+    Y+VV+           PA           D++K   ++A+D
Sbjct: 232 TTPWTIPGSEGITVDKDFDYSVVQ-----------PAG----------DERK--FVIATD 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV     ++G  K    KT+ GS+LE     HP +  +  V + GD++T +SGTGLVHTA
Sbjct: 269 LVEVNAERFGWEKFETLKTVKGSELEYVLTEHPFNPERKLVTMIGDFVTLDSGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D+   ++Y L I  PVDD+G  T EAGK F G+    D N   +  L     L+
Sbjct: 329 PGFGEDDFNVGMQYNLDIFVPVDDKGYLTAEAGKDFEGV-FYEDANQISLDKLKAAGLLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              P EH YP+DWRTKKP IFRAT QWFASV+  R   +DAI  V++ P
Sbjct: 388 KYMPLEHSYPFDWRTKKPIIFRATPQWFASVDKIRSEILDAIDDVQFFP 436



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 102/167 (61%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP +     GA+++RLWV SVD + DV +     +Q+S+ YRK+R T+R+LL N  D+  
Sbjct: 607 VPEKVIKQMGAEIIRLWVLSVDTSADVRVSMDSFKQISESYRKIRNTVRFLLANTTDFDP 666

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N++++DD+  +DQY   ++    K + ++Y +Y F  I++ +  F+ VDLS FY DVA
Sbjct: 667 AKNTVAFDDMEALDQYMEIRINKFTKEVLDAYATYSFMDIYKKLINFVTVDLSAFYLDVA 726

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RRS QTVL    + + +++ P+LPH  E++W  L
Sbjct: 727 KDVVYIESEDSRKRRSMQTVLYDVAVRLTKLLTPVLPHTTEEIWGYL 773


>gi|256848733|ref|ZP_05554167.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|256714272|gb|EEU29259.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
          Length = 933

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 201/477 (42%), Positives = 281/477 (58%), Gaps = 50/477 (10%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVF-LRVADKNDGENFVLHDGPPYANG 163
           R K T++L KT F MR N  VRE E  K W+D++++  R+    D   F LHDGPP+ANG
Sbjct: 2   RIKDTLNLGKTKFKMRGNLPVREAEWQKEWEDNKLYEQRLKLNEDKPRFDLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPS 222
           N+HMGHALNKI KDII RYK +  Y   YVPGWD HGLP+E ++  Q +D   +K +  +
Sbjct: 62  NIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLPVEQQLAKQGVD---RKTMDRA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           K R    ++A+  V+ QMA FKR GV ADW+NPY+TL  ++EA +I VFG+M  +GYIY+
Sbjct: 119 KYRELCRQYAEEQVQKQMADFKRLGVMADWDNPYITLQHDFEAQEIRVFGEMYKKGYIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WS SS + LAEAE+EY +    R IY  F +        G+L+    D+ L +W
Sbjct: 179 GLKPVYWSWSSESTLAEAEVEYHDIKSPR-IYVAFPIKDG----KGILDS---DVSLVIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N  + VN +  Y++VE+                       D KK   ++ S
Sbjct: 231 TTTPWTIPSNVGITVNPRFDYSLVEV-----------------------DGKKY--VIGS 265

Query: 403 DLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNR----QCPVVIGGDYITTESGTG 457
           D +P +    G K   + K L G+D +   Y HP+  +    Q  +V+   Y+T + GTG
Sbjct: 266 DRLPAIAEDLGWKDYKVLKQLKGTDFDGMTYKHPLYGKTGVGQYGLVMNDTYVTDDDGTG 325

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLG----DGNVAVVKY 513
           LVH A G G++DY    KYG+P+ SP+D +G+FT++       D++G    D N  V   
Sbjct: 326 LVHNATGFGEDDYRVGQKYGIPVFSPMDAQGRFTKD---IPDPDLVGMFYDDANKVVADK 382

Query: 514 LDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L +  +L+    + H YP+DWRTKKP +FRAT QWFAS+  FR   +D I Q  ++P
Sbjct: 383 LKKAGALLKLSFFTHSYPHDWRTKKPVVFRATTQWFASISKFRDQILDQIEQANFIP 439



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T RY+L N  D+    N ++Y D
Sbjct: 619 GAEIIRLWVAQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYAD 678

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY   +L ++VK+   +Y+ + F  +F+ +  F+  DLS FY D AKD LY  G 
Sbjct: 679 LRSVDQYMEVKLNDLVKDCLAAYDKFDFTTVFKKVFNFVSNDLSAFYLDFAKDVLYIDGE 738

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S  RRS QTV+    + + +++ PILPH  E++W
Sbjct: 739 NSHDRRSMQTVIYDAAVKLAKILTPILPHTMEEIW 773


>gi|312871879|ref|ZP_07731963.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312874401|ref|ZP_07734431.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311090013|gb|EFQ48427.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311092601|gb|EFQ50961.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 928

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 195/469 (41%), Positives = 289/469 (61%), Gaps = 40/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L  T F MR N  VRE E  K W+D+ ++ +    N+G   F +HDGPP+ANG
Sbjct: 2   KIKDTLNLGNTKFKMRGNLPVREAEWQKQWEDNNLYEQRLKLNEGHPRFDMHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK ++ +   +VPGWD HGLPIE ++ +      +K+L  ++
Sbjct: 62  NIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKK--GVKRKELNMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A + ++ Q   FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+G
Sbjct: 120 YRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS + LAEAE+EY +   + SI+  F+++        +L+    +  L +WT
Sbjct: 180 KKPVYWSWSSESTLAEAEVEYKDVE-ANSIFVAFKLIDG----KDVLD--TDNTYLIIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+ VN K  Y++V++                       D+K    +VA+ 
Sbjct: 233 TTPWTIPANEAICVNPKFDYSLVQVN----------------------DKK---FVVATG 267

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    V+ K+  GS++E  +  HP+ +++  +VI G ++T + GTGLVHT
Sbjct: 268 LLEKVAQEIGWDEYHVV-KSFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APG G +D+   LKY LPI SPVD +G +T+E  + +G+    D +  +++ L    +L+
Sbjct: 326 APGFGADDFNVGLKYNLPIFSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 385 KLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 97/158 (61%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +DQY   +L  ++    ++Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLDAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
               RRS QTV+   L+ + +++ PILPH  E++W  L
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYL 770


>gi|349612334|ref|ZP_08891555.1| isoleucyl-tRNA synthetase [Lactobacillus sp. 7_1_47FAA]
 gi|348608930|gb|EGY58897.1| isoleucyl-tRNA synthetase [Lactobacillus sp. 7_1_47FAA]
          Length = 928

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 195/469 (41%), Positives = 290/469 (61%), Gaps = 40/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L  T F MR N  VRE E  K W+D+ ++ +    N+G   F +HDGPP+ANG
Sbjct: 2   KIKDTLNLGNTKFKMRGNLPVREAEWQKQWEDNNLYEQRLKLNEGHPRFDMHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK ++ +   +VPGWD HGLPIE ++ +   +  +K+L  ++
Sbjct: 62  NIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKKGVK--RKELNMAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A + ++ Q   FKR GV ADWN+PY+T  P++EA +I VFG+M  +GYIY+G
Sbjct: 120 YRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS + LAEAE+EY +   + SI+  F+++        +L+    +  L +WT
Sbjct: 180 KKPVYWSWSSESTLAEAEVEYKDVE-ANSIFVAFKLIDG----KDVLD--TDNTYLIIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+ VN K  Y++V++                       D+K    +VA+ 
Sbjct: 233 TTPWTIPANEAICVNPKFDYSLVQVN----------------------DKK---FVVATG 267

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    V+ K+  GS++E  +  HP+ +++  +VI G ++T + GTGLVHT
Sbjct: 268 LLEKVAQEIGWDEYHVV-KSFKGSEMEYMKAKHPIYDKES-LVIEGFHVTLDDGTGLVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APG G +D+   LKY LPI SPVD +G +T+E  + +G+    D +  +++ L    +L+
Sbjct: 326 APGFGADDFNVGLKYNLPIFSPVDGQGNYTDEVPELAGM-FYQDVDKLMLEKLKACGALL 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS+E FRQ  +D I +V ++P
Sbjct: 385 KLKVFTHSYPHDWRTKKPVIFRATTQWFASIEPFRQQILDEIDKVNFLP 433



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 97/158 (61%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T+R++L N  D+    N++ YD+
Sbjct: 613 GAEIIRLWVAGADTTSDVAVSQDILKQAAESYRKVRNTMRFMLANTSDFDPKKNTVPYDE 672

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +DQY   +L  ++    ++Y+ Y F  +++ +  F+  DLS+FY D AKD LY    
Sbjct: 673 MSGVDQYMEVKLNKLLAECLDAYDHYDFTSVYKNVFSFLSNDLSSFYLDFAKDVLYIESE 732

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
               RRS QTV+   L+ + +++ PILPH  E++W  L
Sbjct: 733 DGQARRSMQTVIYDFLVKLAKLLTPILPHTMEEIWSYL 770


>gi|74354080|gb|AAI02831.1| IARS2 protein [Bos taurus]
          Length = 501

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 199/466 (42%), Positives = 274/466 (58%), Gaps = 31/466 (6%)

Query: 99  EKKEEGRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQVFLRVADKNDGENFVLH 155
           +    G Y+ TV LP+T+F M+     +   E EI +     +++    ++     F LH
Sbjct: 53  QNSSNGSYRDTVLLPQTSFPMKLLGRQQPDTELEIQQKCGFSELYSWQRERKVKAEFCLH 112

Query: 156 DGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA 215
           DGPPYANG+ H+GHALNKILKDI NRY +++  K+ +VPGWDCHGLPIE+KVL  L   A
Sbjct: 113 DGPPYANGDPHVGHALNKILKDIANRYHMMRGSKIHFVPGWDCHGLPIEIKVLSELGGKA 172

Query: 216 KKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMS 275
           + +L+  ++R KA  FAKA ++ Q  SF R+G+ ADWNN Y T D  YEA Q+ +F QM 
Sbjct: 173 Q-NLSAMEIREKARSFAKAAIEKQKLSFIRWGIMADWNNCYYTFDGRYEAKQLRIFYQMY 231

Query: 276 LQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP 335
            +G IYR  KPV WSPSSRTALAEAELEY   H+SRS+Y  F ++   P  + LL+   P
Sbjct: 232 DKGLIYRSYKPVFWSPSSRTALAEAELEYNPEHISRSVYVKFPLLKPSPKLASLLDGSSP 291

Query: 336 DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
            +   VWTT PWT+PAN AV    + +YAVV+  S   GD                    
Sbjct: 292 -VSFLVWTTQPWTIPANQAVCYMPESKYAVVKCSS--SGD-------------------- 328

Query: 396 VFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHP-VDNRQCPVVIGGDYITTES 454
              I+ +D V ++ +  GT   +  T +G DLEN    HP +  R+ P ++  +++T   
Sbjct: 329 -LYILGADKVTSVASTLGTTFEVISTFSGVDLENGSCAHPLISERESP-LLPANHVTMTK 386

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKY 513
           GTGLVHTAP HG EDY  + ++ L     V+++G FT+ AG +     VL +G  AV+  
Sbjct: 387 GTGLVHTAPAHGMEDYSVAAQHNLSTDCLVNEDGVFTDAAGPELQNKAVLKEGTDAVIMM 446

Query: 514 LDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAA 559
           L    +L+ EE   H YPYDWRTKKP + RA++QWF ++   +  A
Sbjct: 447 LQAAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNITDIKTTA 492


>gi|355558756|gb|EHH15536.1| hypothetical protein EGK_01641 [Macaca mulatta]
          Length = 941

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 191/420 (45%), Positives = 260/420 (61%), Gaps = 26/420 (6%)

Query: 152 FVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL 211
           F LHDGPPYANG+ H+GHALNKILKDI NR+ ++   KV +VPGWDCHGLPIE+KVL  L
Sbjct: 37  FCLHDGPPYANGDPHVGHALNKILKDIANRFHMMSGSKVHFVPGWDCHGLPIEIKVLSEL 96

Query: 212 DEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVF 271
             +A+ +L+  ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+  F
Sbjct: 97  GREAQ-NLSAMEIREKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLRTF 155

Query: 272 GQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLN 331
            QM  +G +YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  S  L+
Sbjct: 156 YQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLSSFLD 215

Query: 332 EFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLK 391
              P +   VWTT PWT+PAN AV    + +YAVV               K S+ G++  
Sbjct: 216 GSSP-VSFLVWTTQPWTIPANEAVCYMPESKYAVV---------------KCSKSGDLY- 258

Query: 392 DQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYIT 451
                  ++A+D V T+ +   T      T +G DLEN    HP+   +   ++  +++T
Sbjct: 259 -------VLAADKVETVASTLETAFETISTFSGVDLENGTCSHPLIPDKASPLLPANHVT 311

Query: 452 TESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAV 510
              GTGLVHTAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V
Sbjct: 312 MAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVV 371

Query: 511 VKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +K L    +L+ EE   H YPYDWRTKKP + RA++QWF ++   + AA + + +VK++P
Sbjct: 372 IKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIKIAAKELLKKVKFIP 431



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 104/190 (54%), Gaps = 8/190 (4%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK-LRGTLRYLLGNLHDWRV-GNSI 632
           P YGAD      S +       + P     + D + K LR TLR+LLGN+ D+    +SI
Sbjct: 617 PPYGADQSAHPCSMLPEMILARLEPLFFLFLKDRFAKSLRNTLRFLLGNVADFNPETDSI 676

Query: 633 SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLY 692
             +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LS+FYF + KDRLY
Sbjct: 677 PVNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLY 736

Query: 693 TGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFES 752
                   RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF +
Sbjct: 737 CEKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRT 790

Query: 753 KWPVLDEKWR 762
            W      W+
Sbjct: 791 GWISTSSIWK 800


>gi|67525809|ref|XP_660966.1| hypothetical protein AN3362.2 [Aspergillus nidulans FGSC A4]
 gi|40744150|gb|EAA63330.1| hypothetical protein AN3362.2 [Aspergillus nidulans FGSC A4]
          Length = 1518

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 209/480 (43%), Positives = 287/480 (59%), Gaps = 44/480 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R     +   + +  DD   + R     D   FVLHDGPPYANG+L
Sbjct: 530 WSSTLKLPKSTFPARVTPTDQTKYLKRCTDDLYAWQRRERPAD-RLFVLHDGPPYANGDL 588

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKD---LTPS 222
           H+GHALNKILKDII R +L    +VRYVPGWDCHGLPIELK L++  +DA+++   +  +
Sbjct: 589 HVGHALNKILKDIICRVQLGAGKRVRYVPGWDCHGLPIELKALEA-RKDAREEGGIVDAA 647

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
             R  A   A+ TVK QM  F+ + V ADW N + T+D ++E  Q+ +F +M  +G IYR
Sbjct: 648 VTRKVARNLAEKTVKKQMNGFRSFVVMADWENHWKTMDKDFEKRQLGIFREMVEKGLIYR 707

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL---PDLGL 339
             KPV+WSPS+ TALAEAELEY + HVS + +  F +V+ P   S L  + L    D+  
Sbjct: 708 RFKPVYWSPSTGTALAEAELEYKDDHVSTAAFVKFPLVTVP---SHLKRDPLLQGKDISA 764

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PANAA+A++   QY +VE        SAA                  +++
Sbjct: 765 VIWTTTPWTLPANAAIAIHPLFQYTIVE--------SAAHG----------------YLL 800

Query: 400 VASDLVPTLEAKWGTKL-VIKKTLAGSDLENCRYVHPV---DNRQCPVVIGGDYITTESG 455
           VA   +  LE      L VI  ++ GS+L +     P+    N +   +I  D++T +SG
Sbjct: 801 VAQSRLEYLEFVLKEDLSVIVPSILGSELVDNTTYQPLFKAANSEPQPLIAADFVTADSG 860

Query: 456 TGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAV 510
           TGLVH APGHG EDY   L  G+   +PVDD GKFT+ A      + SG  VL DGNVAV
Sbjct: 861 TGLVHCAPGHGMEDYEACLSRGILAFAPVDDHGKFTDLAMPDDPKRLSGKSVLADGNVAV 920

Query: 511 VKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           ++Y++ Q  L+ +  Y H+YPYDWR+K+P I RATEQWFA V   + +A+ A+  V++VP
Sbjct: 921 LEYIESQGQLLFQHRYGHRYPYDWRSKQPIIIRATEQWFADVADIQSSALKALDDVQFVP 980



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 90/160 (56%)

Query: 578  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
            G D LRLW +S DYT DV++G QVL+ +     K R T + LLG L D+R  N + YD L
Sbjct: 1193 GPDALRLWAASSDYTRDVVMGKQVLQTVHTSLHKYRVTFKLLLGALSDFRPENKVQYDQL 1252

Query: 638  PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
             ++D+ AL  L  +    R + E ++F+K    + R+  ++ S FY +  KDRLYT    
Sbjct: 1253 LLVDRIALLHLSEMTLAARTACEKFEFYKAVSAVNRWANLEFSAFYMEAIKDRLYTYAEN 1312

Query: 698  SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
            S +RR+ QT L      +  V+ PI P L E+ W++ P A
Sbjct: 1313 SPSRRAAQTTLFHIYQHLQEVLGPITPLLVEETWEHTPEA 1352


>gi|345862715|ref|ZP_08814929.1| isoleucine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
           Tica)]
 gi|345126057|gb|EGW55923.1| isoleucine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
           Tica)]
          Length = 940

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 194/475 (40%), Positives = 282/475 (59%), Gaps = 37/475 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LPKT F MR N   REP++ K W++ +++ ++ +   G   F+LHDGPPYANGN
Sbjct: 4   YKQTLNLPKTAFPMRGNLAQREPQMLKQWEEKKLYAKIRETAAGRPKFILHDGPPYANGN 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + + L  +   YVPGWDCHGLPIEL+V + + +   K +T S+ 
Sbjct: 64  IHIGHAVNKILKDIIVKSRTLDGFDAPYVPGWDCHGLPIELQVEKKIGKPGGK-VTSSQF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   V  Q   FKR GV  +W+NPYLT+D  +EA  +   G++  QG++++G 
Sbjct: 123 RKACREYAAKQVDGQREDFKRLGVLGEWDNPYLTMDHRFEADIVRSLGRIVEQGHVHKGS 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD------LG 338
           KPVHW     +ALAEAE+EY +   S +I   FR++  P          +PD      + 
Sbjct: 183 KPVHWCTDCGSALAEAEVEY-QNKDSFAIDVRFRVLEEPALFDRC--HHVPDGLGEGPIN 239

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           + +WTTTPWT+PAN AVA+N  L+YAVV+    L        N++              +
Sbjct: 240 MVIWTTTPWTLPANQAVALNPSLEYAVVQCDGPL-------GNER--------------M 278

Query: 399 IVASDLVPTLEAKWGT-KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           ++A  ++  +  ++G  K  +     G   E  +  HP  +RQ PV++ G+++T E+GTG
Sbjct: 279 VIADAMLKDVMDRYGIEKYHVLGYAKGEAFEGLKLQHPFYDRQVPVIL-GEHVTLEAGTG 337

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
            VHTAPGHG +DYV   +YGLP+ +PV + G F E    F+G  V    N  V++ L  +
Sbjct: 338 AVHTAPGHGLDDYVVGQRYGLPVDNPVGNNGCFVEGTELFAGQHVFS-ANEKVIEVLKAR 396

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            +L+ EE   H YP+ WR K P IFRAT QWF S++  G R +AM  I QV+W+P
Sbjct: 397 GALVREERLNHSYPHCWRHKTPIIFRATPQWFISMDQAGLRASAMREIEQVEWLP 451



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 119/211 (56%), Gaps = 14/211 (6%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +     GAD++RLWV++ DY  ++ +  ++L++ +D YR++R T R+LL NL+ +   
Sbjct: 618 PQKVTKNLGADIIRLWVAATDYRNEMSVSDEILKRTADAYRRIRNTTRFLLSNLNGFDPA 677

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + ++  ++  +D++A+ +   + + I ++Y+ YQF  I+Q I  F + +L  FY DV K
Sbjct: 678 QHMVAAGEMIELDRWAVDRTLQLQQEIADAYKGYQFHLIYQKILNFCVTELGGFYLDVIK 737

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 748
           DR YT    S  RRSCQT +   + ++VR +APIL   A++VW ++P       G   E 
Sbjct: 738 DRQYTTQADSLPRRSCQTAMYHIVEAMVRWLAPILSFTADEVWAHMP-------GERGES 790

Query: 749 VFESKWPVLDEKWRTFPVGEIY---FWGKIL 776
           VF   W    E       G+ +   FWG+++
Sbjct: 791 VFLEGWY---EGLFALDAGDSFDRAFWGQVI 818


>gi|296424632|ref|XP_002841851.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638101|emb|CAZ86042.1| unnamed protein product [Tuber melanosporum]
          Length = 956

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 189/428 (44%), Positives = 270/428 (63%), Gaps = 35/428 (8%)

Query: 152 FVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL 211
           FVLHDGPPYANG LH+GHALNKILKDI+ R+++L    + Y+PGWDCHGLPIELK LQS 
Sbjct: 36  FVLHDGPPYANGTLHLGHALNKILKDIVGRFQVLSGRHLSYIPGWDCHGLPIELKALQSH 95

Query: 212 DEDAK-KDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEV 270
            E  K K +  +++R+ A + A+ T+  QMA F+ +GV  DW+N + T+D +YE +Q+ V
Sbjct: 96  TESLKGKAMDAAEIRSLARELAEKTITEQMAEFRSWGVMGDWDNHWRTMDKDYEISQLRV 155

Query: 271 FGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLL 330
           F +M  +G +YR  KPV WSPSS TALAEAELEY E HVSR+ +  F +    P+ S  L
Sbjct: 156 FKEMLKRGLLYRRFKPVFWSPSSGTALAEAELEYNEKHVSRAAFVAFPI---RPTASPGL 212

Query: 331 NEFLPDLGL--AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGN 388
              L  + +  AVWTTTPWT+PAN A+A+NA+++Y VV+ ++   G     + +    G 
Sbjct: 213 GTRLDGISVRAAVWTTTPWTIPANKAIAINAEIEYCVVDTEN--HGKLLVASGRVGELGK 270

Query: 389 VLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPV--DNRQCPVVIG 446
            + +Q KV I                       + G +L   +Y+HP+  ++ Q   ++ 
Sbjct: 271 GINEQPKVII---------------------DGILGQNLVGAQYLHPLLREDAQLQPILP 309

Query: 447 GDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA---GKFSGLDVL 503
           GD++T +SGTGLVH APGHG +DY+   K+ +   SPVD++G+FTE+A       G++VL
Sbjct: 310 GDFVTADSGTGLVHCAPGHGMDDYLLCRKHDIEPFSPVDNDGRFTEDALPGYGLEGMEVL 369

Query: 504 GDGNVAVVKYLDEQMSLIMEEP-YEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDA 562
             G   +++ L E  +L+  +P + HKYPYDWRTK+P I RAT QWFA V+  +   +D+
Sbjct: 370 FGGTKKILQILMESKALLALQPRFTHKYPYDWRTKRPVIVRATAQWFADVDVIKDVCVDS 429

Query: 563 IGQVKWVP 570
           +  V +VP
Sbjct: 430 LKNVVFVP 437



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 103/173 (59%), Gaps = 1/173 (0%)

Query: 561 DAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 620
           + +  V  + P+     G D LRLWV+S DYT DV IG  +L  +++  RKLR TLR+LL
Sbjct: 612 NTMAPVDVIQPKGKSIGGIDALRLWVASCDYTKDVSIGSTILDGVNENLRKLRVTLRFLL 671

Query: 621 GNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           GNL DW  G  + Y DL   D+YAL QL  + + I E+Y++  F ++ QII  +   DLS
Sbjct: 672 GNLEDWD-GKEVDYFDLTKTDKYALAQLYQVNRAIAETYKNMHFNRVIQIIMSYTNTDLS 730

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQN 733
            FY DV KD +Y+    S  RR  QTV+   L + + ++ PI+P L ++VW +
Sbjct: 731 AFYLDVTKDSMYSDPKDSQRRRGIQTVIYHILRNYLSILTPIVPLLTQEVWSH 783


>gi|345876494|ref|ZP_08828262.1| riboflavin biosynthesis protein ribF [endosymbiont of Riftia
           pachyptila (vent Ph05)]
 gi|344226461|gb|EGV52796.1| riboflavin biosynthesis protein ribF [endosymbiont of Riftia
           pachyptila (vent Ph05)]
          Length = 940

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 194/475 (40%), Positives = 282/475 (59%), Gaps = 37/475 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LPKT F MR N   REP++ K W++ +++ ++ +   G   F+LHDGPPYANGN
Sbjct: 4   YKQTLNLPKTAFPMRGNLAQREPQMLKQWEEKKLYAKIRETAAGRPKFILHDGPPYANGN 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + + L  +   YVPGWDCHGLPIEL+V + + +   K +T S+ 
Sbjct: 64  IHIGHAVNKILKDIIVKSRTLDGFDAPYVPGWDCHGLPIELQVEKKIGKPGGK-VTSSQF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   V  Q   FKR GV  +W+NPYLT+D  +EA  +   G++  QG++++G 
Sbjct: 123 RKACREYAAKQVDGQREDFKRLGVLGEWDNPYLTMDHRFEADIVRSLGRIVEQGHVHKGS 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD------LG 338
           KPVHW     +ALAEAE+EY +   S +I   FR++  P          +PD      + 
Sbjct: 183 KPVHWCTDCGSALAEAEVEY-QNKDSFAIDVRFRVLEEPALFDRC--HHVPDGLGEGPIN 239

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           + +WTTTPWT+PAN AVA+N  L+YAVV+    L        N++              +
Sbjct: 240 MVIWTTTPWTLPANQAVALNPSLEYAVVQCDGPL-------GNER--------------M 278

Query: 399 IVASDLVPTLEAKWGT-KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           ++A  ++  +  ++G  K  +     G   E  +  HP  +RQ PV++ G+++T E+GTG
Sbjct: 279 VIADAMLKDVMDRYGIEKYHVLGYAKGEAFEGLKLQHPFYDRQVPVIL-GEHVTLEAGTG 337

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
            VHTAPGHG +DYV   +YGLP+ +PV + G F E    F+G  V    N  V++ L  +
Sbjct: 338 AVHTAPGHGLDDYVVGQRYGLPVDNPVGNNGCFVEGTELFAGQHVFS-ANEKVIEVLKAR 396

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            +L+ EE   H YP+ WR K P IFRAT QWF S++  G R +AM  I QV+W+P
Sbjct: 397 GALVREERLNHSYPHCWRHKTPIIFRATPQWFISMDQAGLRASAMREIEQVEWLP 451



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 119/211 (56%), Gaps = 14/211 (6%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +     GAD++RLWV++ DY  ++ +  ++L++ +D YR++R T R+LL NL+ +   
Sbjct: 618 PQKVTKNLGADIIRLWVAATDYRNEMSVSDEILKRTADAYRRIRNTTRFLLSNLNGFDPA 677

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + ++  ++  +D++A+ +   + + I ++Y+ YQF  I+Q I  F + +L  FY DV K
Sbjct: 678 QHMVAAGEMIELDRWAVDRTLQLQQEIADAYKGYQFHLIYQKILNFCVTELGGFYLDVIK 737

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 748
           DR YT    S  RRSCQT +   + ++VR +APIL   A++VW ++P       G   E 
Sbjct: 738 DRQYTTQADSLPRRSCQTAMYHIVEAMVRWLAPILSFTADEVWAHMP-------GERGES 790

Query: 749 VFESKWPVLDEKWRTFPVGEIY---FWGKIL 776
           VF   W    E       G+ +   FWG+++
Sbjct: 791 VFLEGWY---EGLFALDAGDSFDRAFWGQVI 818


>gi|355745904|gb|EHH50529.1| hypothetical protein EGM_01376 [Macaca fascicularis]
          Length = 941

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 190/420 (45%), Positives = 261/420 (62%), Gaps = 26/420 (6%)

Query: 152 FVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL 211
           F LHDGPPYANG+ H+GHALNKILKDI NR+ ++   KV +VPGWDCHGLPIE+KVL  L
Sbjct: 37  FCLHDGPPYANGDPHVGHALNKILKDIANRFHMMSGSKVHFVPGWDCHGLPIEIKVLSEL 96

Query: 212 DEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVF 271
             +A+ +L+  ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+  F
Sbjct: 97  GREAQ-NLSAMEIREKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLRTF 155

Query: 272 GQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLN 331
            QM  +G +YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++
Sbjct: 156 YQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLID 215

Query: 332 EFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLK 391
              P +   VWTT PWT+PAN AV    + +YAVV               K S+ G++  
Sbjct: 216 GSSP-VSFLVWTTQPWTIPANEAVCYMPESKYAVV---------------KCSKSGDLY- 258

Query: 392 DQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYIT 451
                  ++A+D V T+ +   T      T +G DLEN    HP+   +   ++  +++T
Sbjct: 259 -------VLAADKVETVASTLETAFETISTFSGVDLENGTCSHPLIPDKASPLLPANHVT 311

Query: 452 TESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAV 510
              GTGLVHTAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V
Sbjct: 312 MAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVV 371

Query: 511 VKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +K L    +L+ EE   H YPYDWRTKKP + RA++QWF ++   + AA + + +VK++P
Sbjct: 372 IKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIKIAAKELLKKVKFIP 431



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 104/190 (54%), Gaps = 8/190 (4%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK-LRGTLRYLLGNLHDWRV-GNSI 632
           P YGAD      S +       + P     + D + K LR TLR+LLGN+ D+    +SI
Sbjct: 617 PPYGADQSAHPCSMLPEMILARLEPLFFLFLKDRFAKSLRNTLRFLLGNVADFNPETDSI 676

Query: 633 SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLY 692
             +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LS+FYF + KDRLY
Sbjct: 677 PVNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLY 736

Query: 693 TGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFES 752
                   RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF +
Sbjct: 737 CEKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRT 790

Query: 753 KWPVLDEKWR 762
            W      W+
Sbjct: 791 GWISTSSIWK 800


>gi|95928499|ref|ZP_01311246.1| isoleucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95135289|gb|EAT16941.1| isoleucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 930

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 204/468 (43%), Positives = 272/468 (58%), Gaps = 33/468 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LPKT F MR N   REPE+ + W+   +   +     G   F LHDGPPYANG+
Sbjct: 3   YKDTLNLPKTDFPMRGNLPKREPEMLQQWEKMDLNGEIRKATAGRPRFTLHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
            H+GHALNKILKDI+ + + +Q + V YVPGWDCHGLPIEL V + L +  K+D+T +++
Sbjct: 63  THIGHALNKILKDIVLKSRRMQGFDVPYVPGWDCHGLPIELMVDKKLGK-KKRDMTKAEI 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +   +A   V  Q + FKR G++ +W++PYLT+   YEAA      + + +G +Y+GK
Sbjct: 122 RRECRNYATEWVDTQASEFKRLGIFGEWDDPYLTMHDSYEAATARELARFAERGGLYKGK 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPVHW  S  TALAEAE+EY + HVS SI+  F  V   P     L      L   +WTT
Sbjct: 182 KPVHWCSSCVTALAEAEVEYAD-HVSPSIFVKFPYVDTLPVELNALEG--KSLYFVIWTT 238

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  + +N +L Y  VE+     GD    A    +   VLK+ +    ++AS  
Sbjct: 239 TPWTIPANLGICLNPELDYVAVEVAG---GDVLVLAEGLYQ--GVLKELELEGQVIASFK 293

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
            P  E K                  CR  HP   R   +VI GD++T E+GTG VHTAPG
Sbjct: 294 APLFENK-----------------RCR--HPFYERD-SLVILGDHVTLEAGTGCVHTAPG 333

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG +DYV  LKYGL I +PVDD G++ ++   F G+  L + N AV   L E  +L+   
Sbjct: 334 HGHDDYVVGLKYGLDIYNPVDDYGRYRKDVELFGGMK-LAEANDAVCDKLTEVGALLKVS 392

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             EH YP+ WR KKP IFRAT QWF S+E    RQ A+  I  V+W+P
Sbjct: 393 KVEHSYPHCWRCKKPVIFRATAQWFISMEKNDLRQQALKHINDVQWIP 440



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 107/160 (66%), Gaps = 1/160 (0%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           +GA+VLRLWV++ DY  D+ I  ++L+++SD YR++R T RY+L N++D+    +S++  
Sbjct: 620 FGAEVLRLWVAAQDYQDDIRISQEILQRLSDAYRRIRNTARYILSNIYDFDPATDSVADG 679

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           DL  +D++AL +LE++V  + ++Y  Y+F  ++  +  F  V+LS+ Y D+ KDR+YT  
Sbjct: 680 DLLELDRWALSRLESLVGRVEKAYNDYEFHMLYHAVHNFCSVELSSIYLDILKDRVYTAA 739

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
             S  RRS QT +   L ++ R+IAP+L   A+++W  +P
Sbjct: 740 PNSVARRSAQTAMYRILDALTRLIAPVLSFTADEIWAQMP 779


>gi|117925437|ref|YP_866054.1| isoleucyl-tRNA synthetase [Magnetococcus marinus MC-1]
 gi|117609193|gb|ABK44648.1| Isoleucyl-tRNA synthetase [Magnetococcus marinus MC-1]
          Length = 954

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 203/475 (42%), Positives = 278/475 (58%), Gaps = 29/475 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ LP+T   MRAN   REPEI   W    ++ R+ +   G+  F+LHDGPPYANG+
Sbjct: 3   YKDTIQLPETELPMRANLPQREPEILAKWAQMALYERLRESGQGKQPFILHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           LHMGHA+NK+LKDII + + +Q     YVPGWDCHGLPIELK  Q L  +   K+++   
Sbjct: 63  LHMGHAINKVLKDIICKSRQMQGMDAVYVPGWDCHGLPIELKAEQELKAEGKEKEEIDVV 122

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
             R +   FA   V+ Q   F+R GV  DW+NPYLT+D  +EA  +   G+    G +Y+
Sbjct: 123 AFRQRCRTFAGKWVETQKEEFQRLGVSGDWHNPYLTMDYRFEADIVRELGRFLHNGGLYK 182

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG---- 338
           G KPV+W     TALAEAE+EY + H S +IY  F     P +    L +  P+L     
Sbjct: 183 GAKPVYWCTHDVTALAEAEVEY-QDHESTTIYVKF-----PLAAEASLADLHPELAGKSC 236

Query: 339 -LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVF 397
            + +WTTTPWT+PAN AV +N  L Y +VEI +  +  + A          +L +     
Sbjct: 237 SVVIWTTTPWTIPANLAVCLNGDLSYVMVEILNPADNHNLAVGEHL-----LLAEALWEP 291

Query: 398 IIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
            + A+ L P  +A    ++V++  L+G+DLEN R+ HP   +  P+++ GD++TTE+GTG
Sbjct: 292 TLQAAGLNPERDA----RVVVR--LSGADLENRRFRHPFLEQDAPILL-GDHVTTEAGTG 344

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
            VHTAPGHG EDY  SLKYG+   +PVDD GKF E    F+G + +   N  VV  LDE+
Sbjct: 345 CVHTAPGHGAEDYEVSLKYGIQPYNPVDDYGKFVEGTPFFAG-EHIKKANPQVVTLLDER 403

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            +L+      H YP+ WR   P I RAT QWF S+E    R+ A+ AI    W+P
Sbjct: 404 GALLASSKINHSYPHCWRCSTPLITRATPQWFISMEINDLRKKALQAIKDTSWIP 458



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 61/159 (38%), Positives = 105/159 (66%), Gaps = 1/159 (0%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LR+WVS+ DY GD+ I  ++L+ +SD YR++R T+RYL+ NL  +    +++ Y 
Sbjct: 638 YGADILRMWVSAEDYAGDIRISDEILKGLSDAYRRIRNTIRYLISNLSGFDAAEHTVPYG 697

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
            L  +D++AL ++  +++++ ++Y  Y F +++Q +  F  V++  FY D+ KDRLY   
Sbjct: 698 QLLELDRWALDRVARLIRDVEKAYTDYTFHRVYQSLHYFCGVEMGAFYLDIIKDRLYCDA 757

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
             S  RRS QTV+   L ++VR++AP++   AE+VW  +
Sbjct: 758 PDSVERRSAQTVMHHMLETLVRLMAPVMAFTAEEVWHYM 796


>gi|242279474|ref|YP_002991603.1| isoleucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259511501|sp|C6BV89.1|SYI_DESAD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|242122368|gb|ACS80064.1| isoleucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 937

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 207/479 (43%), Positives = 284/479 (59%), Gaps = 48/479 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T+ LPKT F M+AN   REPE+ K W++  V+ ++ + N + E +VLHDGPPYANG+
Sbjct: 4   YKKTLCLPKTKFPMKANLKQREPEMLKRWEETGVYEKMVEANAEAEQYVLHDGPPYANGH 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMG A+NK+LKDII + + LQ  K  YVPGWDCHGLPIE KV Q L +  K+  T + +
Sbjct: 64  IHMGTAMNKVLKDIIVKSRNLQGMKAEYVPGWDCHGLPIEHKVEQELKKKKKELPT-TVI 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   V  Q   FKR GV  +W +PYLT+ PEYEAA     G+   +G + RGK
Sbjct: 123 RKLCREYAAKFVDIQRKEFKRLGVLGNWEDPYLTMKPEYEAATARELGRFMEKGSVIRGK 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG------ 338
           KP+HW    RTALAEAE+EY E H S SIY  F     P +   +L     D+       
Sbjct: 183 KPIHWCCDCRTALAEAEVEY-EDHTSPSIYVRF-----PLNDEKVLKALPEDVASKVDLS 236

Query: 339 ---LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
              + +WTTTPWT+P N AVAV+ + +YAV E+     GD                    
Sbjct: 237 RTYVCIWTTTPWTIPDNMAVAVHPEFEYAVTEVN----GD-------------------- 272

Query: 396 VFIIVASDLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
              I+A  L+P     +G     +  T+AG+ LE     HP+ +R+ PVV+  DY+T +S
Sbjct: 273 -IYILAERLLPVCAESFGWESWNVLATVAGAKLEGAVAKHPIYDRKSPVVL-ADYVTLDS 330

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           GTG VHTAPGHG+ED+ T LK GL + SP+++ G F +E   F+G++V  + N  V++ L
Sbjct: 331 GTGCVHTAPGHGREDFETGLKNGLEVYSPMNNSGVFLKEVEFFAGMNVW-EANPKVIEKL 389

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 570
           +E  +L+ +E   H YP+ WR K+P IFRAT QWF  +E    R+ A+ AI   V+W+P
Sbjct: 390 EEVGNLLAQEKISHSYPHCWRCKEPVIFRATTQWFIGMEENDLRKKALKAIKDDVEWLP 448



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 72/191 (37%), Positives = 116/191 (60%), Gaps = 8/191 (4%)

Query: 562 AIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 620
           +IG V  + PQE    +GA++LR+WVS+V+Y  DV I  ++L +M D YR++R T RY+L
Sbjct: 616 SIGNV--IAPQEIIDQHGAEILRMWVSAVNYQEDVRISDEILSRMVDTYRRVRNTCRYIL 673

Query: 621 GNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDL 679
           GNL  +    ++++  D+  ID +AL  +    + I+++Y +++F K++  +      +L
Sbjct: 674 GNLDGFNPETDAVAPADMLPIDHFALDLVNRQHEVIQKAYTNFEFHKVYHTLHNLCTTEL 733

Query: 680 SNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT 739
           S FY D+ KDRLY  G  S  RRS QTVL   +L +++ +APIL   AE+ + ++P    
Sbjct: 734 SAFYLDIIKDRLYVSGEKSLERRSAQTVLWQTMLMLLKDMAPILSFTAEEAYSHMP---- 789

Query: 740 LEDGSAAEFVF 750
            E   +AE VF
Sbjct: 790 EEMKGSAETVF 800


>gi|312880110|ref|ZP_07739910.1| Isoleucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783401|gb|EFQ23799.1| Isoleucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 931

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 206/476 (43%), Positives = 276/476 (57%), Gaps = 49/476 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK ++ LPKT F MRAN   REP+    W++H ++ +  D+ +G   FVLHDGPPYAN N
Sbjct: 5   YKDSLCLPKTDFPMRANLAQREPQFLAFWEEHGIYQKQQDQREGSPTFVLHDGPPYANAN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL--QSLDEDAKKDLTPS 222
           +H+G A NKILKD I +YK ++ ++  YVPGWD HGLPIELKVL  Q LD+D   ++ P 
Sbjct: 65  IHIGTAFNKILKDFIPKYKAMRGFRAPYVPGWDTHGLPIELKVLKEQGLDKD---NVDPV 121

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           +LR +   +A   +  Q   F+R GV  DW NPYLTL PEYEAAQ+  F  M  +G +Y+
Sbjct: 122 ELRRRCTSYAHQFIDIQREEFRRLGVLGDWENPYLTLRPEYEAAQLGAFADMVEKGLVYK 181

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG---- 338
           G+KPV W    +TALA AE+EY E   S SIY  + +          + +  P+L     
Sbjct: 182 GQKPVFWCTDCQTALAAAEIEY-EDESSPSIYVAYPLPE--------VEKRFPELAGRAC 232

Query: 339 -LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVF 397
            + +WTTTPWT+PA+ AVA++   +YA            +AP  K               
Sbjct: 233 SVVIWTTTPWTLPASLAVALHPGYRYAFF----------SAPEGKA-------------- 268

Query: 398 IIVASDLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPV-DNRQCPVVIGGDYITTESG 455
            ++A++L    E   G +      +L G DLE    +HP  + R+ P+V+  DY+  +SG
Sbjct: 269 FLMATELKEAFEKACGLSLEEELLSLTGRDLEGVEALHPFYEERRVPLVL-ADYVVLDSG 327

Query: 456 TGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLD 515
           TG VHTAPGHG ED+ T ++YGL IL+PVDD G F  +     GL  L DG   V+K L 
Sbjct: 328 TGCVHTAPGHGVEDFETGVRYGLEILNPVDDRGVFLPDTPLVGGLS-LDDGAAVVLKTLS 386

Query: 516 EQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQVKWVP 570
           +   L+      H YP+ WR KKP IFRAT QWF SV+ FR  A+ AI  QV+WVP
Sbjct: 387 DSGRLLGRGKILHSYPHCWRCKKPVIFRATAQWFVSVQQFRDQALKAIEEQVQWVP 442



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/206 (38%), Positives = 122/206 (59%), Gaps = 8/206 (3%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    ++G V    PQE    YGAD+LRLWV+S DY GDV I   +L+ + + YR
Sbjct: 598 VDGEGRKMSKSLGNV--TRPQEVIDRYGADILRLWVASTDYRGDVRISETILKNLVETYR 655

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+LLGNL  +    + +S  D+  +D + L +L+++V+ + + YE Y+F     
Sbjct: 656 RIRNTARFLLGNLEGFDPQKHRVSRGDMEPLDLWLLARLQDLVERVTKGYEDYEFHVPSF 715

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
           +  +F   ++S+F+ DV+KDRLY       +RRS QTVL   L ++ R++AP+L   AE+
Sbjct: 716 LTHQFCDNEMSSFFLDVSKDRLYADQKGGLSRRSAQTVLWETLTTLCRLLAPVLSFTAEE 775

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKWP 755
           +WQNL       D S  E VF S WP
Sbjct: 776 IWQNL----RAFDASLPESVFLSDWP 797


>gi|374625047|ref|ZP_09697464.1| isoleucine-tRNA ligase [Coprobacillus sp. 8_2_54BFAA]
 gi|373916330|gb|EHQ48078.1| isoleucine-tRNA ligase [Coprobacillus sp. 8_2_54BFAA]
          Length = 909

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 195/466 (41%), Positives = 278/466 (59%), Gaps = 38/466 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   +EP+  + W    ++ RV ++N+G E+FV HDGPPYANGN
Sbjct: 3   YKDTLLMPKTEFEMRGNLPKKEPKYVERWQKENMYERVIEQNNGKEDFVFHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGH LNK++KD+I RY  ++     Y+PGWD HGLPIE   +Q L  + +K+++ +  
Sbjct: 63  MHMGHMLNKVIKDVICRYNNMEGRYTPYIPGWDTHGLPIE-NAIQKLGVN-RKEMSTAAF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V  QM    R G +AD+ +PYLTL PE+EA QI+VF +M++ G I++G 
Sbjct: 121 REKCDEYAHEQVNKQMEQLIRMGTFADYKHPYLTLMPEFEANQIDVFAKMAMDGLIFKGL 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S +I+  F    A     G+L+    D    +WTT
Sbjct: 181 KPVYWSPSSESALAEAEIEYHDIK-SPTIFVKF----AVKDGKGILD---TDTSFVIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+ +N +  YA++E                           K  +IV ++L
Sbjct: 233 TPWTIPANLAICLNERYDYALIETT-------------------------KGKLIVLNEL 267

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V +L  K+  T+  + K   GS+LE     HP+ +R+  +VI GD++T E+GTG VHTAP
Sbjct: 268 VDSLMEKFEITEYKVIKNFKGSELELITCQHPLYDRE-SLVILGDHVTAEAGTGCVHTAP 326

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           G G +D+    KYGLP    VD+ G   ++ G++     + D N  V   LDE   L+  
Sbjct: 327 GFGADDFFVGQKYGLPAYCNVDEHGCMMKDCGEWLEGQYVDDANKTVTMKLDELGVLLKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
           E   H YP+DWRTKKP IFRAT+QWF SV+  R+  +  I +V W+
Sbjct: 387 EFITHSYPHDWRTKKPIIFRATDQWFCSVDKIREKLLSEIDKVNWL 432



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 103/161 (63%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +    YGAD++RLW +SV Y  DV I   +++Q+S+ YRK+R T+R++LGNL+D++  
Sbjct: 604 PIKLVNQYGADIVRLWATSVAYQQDVRISNDIMKQISENYRKIRNTMRFVLGNLNDFKQA 663

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
           + ++ + L  +D+Y L QL +++K   ++Y++Y F +  Q+I  +    LS+FY D  KD
Sbjct: 664 DLVAVEALADVDKYMLAQLNDLIKGYHKAYDNYDFAEANQLILNYFTNLLSSFYMDFTKD 723

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
            LY     S  RR  QTVL  H  +++++I+P+L   AE++
Sbjct: 724 ILYIEKADSLRRRQVQTVLYYHAKAMMKLISPVLVFTAEEL 764


>gi|160933116|ref|ZP_02080505.1| hypothetical protein CLOLEP_01959 [Clostridium leptum DSM 753]
 gi|156868190|gb|EDO61562.1| isoleucine--tRNA ligase [Clostridium leptum DSM 753]
          Length = 931

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 198/471 (42%), Positives = 273/471 (57%), Gaps = 37/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           Y  T++LPKT F MRA     EPE  K W+  +V+  V + N+G+  +VLHDGPPYANGN
Sbjct: 5   YNQTMNLPKTEFPMRAGLPQSEPERLKKWEADRVYDHVMENNEGKPLYVLHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G ALNK LKD I RYK +  ++  YVPGWD HGLP ELK  +    D    ++  +L
Sbjct: 65  IHLGTALNKTLKDFIVRYKNMAGFQSPYVPGWDTHGLPTELKARKKAGVDNSSTISDVEL 124

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    +FA+  +  Q + FKR G   +W+NPY+TL  E+EA QIEVF +M+ +GYIY+G 
Sbjct: 125 RKICREFAEGYIDDQRSQFKRLGGIGEWDNPYITLQKEFEATQIEVFAEMACKGYIYKGL 184

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG---LAV 341
           KPV+W P  +TALAEAE+EY E     SIY  F +        GLL +   DL      +
Sbjct: 185 KPVYWCPDCQTALAEAEIEYAEDPCD-SIYVKFLVT----DDKGLLTQMGADLSKTYFVI 239

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTT WT+PAN A+ V     Y++V                        K + + +++  
Sbjct: 240 WTTTTWTLPANDAICVGPNFTYSLV------------------------KWEDEYYVMAE 275

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +     ++A   T   +  T+ G DLE  +  HP  +R   V++ GD++T ESGTG VHT
Sbjct: 276 ALYESAMKAAGKTGYQVVGTIQGKDLEYMKTAHPFIDRTSLVIV-GDHVTLESGTGCVHT 334

Query: 462 APGHGQEDYVTSLKY-GLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           APGHG +D+     Y  +P++ PVD  G+ TEEAG KF+GL      N A+ ++L E  +
Sbjct: 335 APGHGVDDFNVCQNYPDIPVIVPVDSLGRMTEEAGEKFAGL-TTSQANAAIAEHLKETGA 393

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L   E   H+YP+ WR K   +FRATEQWF SVE F++ A+ AI  V+W+P
Sbjct: 394 LFAMEKIIHQYPHCWRCKNQVLFRATEQWFCSVEDFKEDAVKAIQDVQWIP 444



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/204 (39%), Positives = 125/204 (61%), Gaps = 8/204 (3%)

Query: 536 TKKPTIFRA--TEQWFASVEGFRQAAMDAIGQVKWVPPQE-APGYGADVLRLWVSSVDYT 592
           TK    ++A  T  W    EG + +     G    + PQE    YGAD+LRLWV+S DY 
Sbjct: 584 TKGTAPYKAVVTHGWVVDGEGRKMSKSLGNG----IEPQEIVDQYGADILRLWVASSDYH 639

Query: 593 GDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENI 651
            D+ I   +L+Q+S+ YRK+R T RY+LGNL+D+    + +  D L  IDQ+AL +L+ +
Sbjct: 640 ADIRISKDILKQLSEAYRKIRNTARYILGNLYDFNPDTDRVPLDQLLPIDQWALKKLDEL 699

Query: 652 VKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAH 711
            + +RE Y++++F +++  I  F +VD+SNFY DV KDRLY        RR+ QT +   
Sbjct: 700 NQKVREGYDAFEFHQVYHAIHNFCVVDMSNFYLDVIKDRLYAEKADGKLRRAAQTAIYTI 759

Query: 712 LLSIVRVIAPILPHLAEDVWQNLP 735
           L ++ R+IAPIL + A+++W+ +P
Sbjct: 760 LDAMTRMIAPILAYTADEIWEYMP 783


>gi|67970170|dbj|BAE01429.1| unnamed protein product [Macaca fascicularis]
          Length = 940

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 190/420 (45%), Positives = 261/420 (62%), Gaps = 26/420 (6%)

Query: 152 FVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL 211
           F LHDGPPYANG+ H+GHALNKILKDI NR+ ++   KV +VPGWDCHGLPIE+KVL  L
Sbjct: 37  FCLHDGPPYANGDPHVGHALNKILKDIANRFHMMSGSKVHFVPGWDCHGLPIEIKVLSEL 96

Query: 212 DEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVF 271
             +A+ +L+  ++R KA  FAKA ++ Q ++F R+G+ ADWNN Y T D +YEA Q+  F
Sbjct: 97  GREAQ-NLSAMEIREKARSFAKAAIEKQKSAFIRWGIMADWNNCYYTFDGKYEAKQLRTF 155

Query: 272 GQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLN 331
            QM  +G +YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++   P  + L++
Sbjct: 156 YQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVKFPLLKPSPKLASLID 215

Query: 332 EFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLK 391
              P +   VWTT PWT+PAN AV    + +YAVV               K S+ G++  
Sbjct: 216 GSSP-VSFLVWTTQPWTIPANEAVCYMPESKYAVV---------------KCSKSGDLY- 258

Query: 392 DQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYIT 451
                  ++A+D V T+ +   T      T +G DLEN    HP+   +   ++  +++T
Sbjct: 259 -------VLAADKVETVASTLETAFETISTFSGVDLENGTCSHPLIPDKASPLLPANHVT 311

Query: 452 TESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAV 510
              GTGLVHTAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL +G   V
Sbjct: 312 MAKGTGLVHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVLEEGTDVV 371

Query: 511 VKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +K L    +L+ EE   H YPYDWRTKKP + RA++QWF ++   + AA + + +VK++P
Sbjct: 372 IKMLQTAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFINIADIKIAAKELLKKVKFIP 431



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 84/189 (44%), Positives = 112/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V IGP VL    D   KLR TLR+LLGN+ D+    +SI 
Sbjct: 617 PPYGADVLRWWVADSNVFTEVAIGPSVLNAARDDISKLRNTLRFLLGNVADFNPETDSIP 676

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            +D+ +IDQY L  L+++   I E Y+ Y F K+ ++++ F   +LS+FYF + KDRLY 
Sbjct: 677 VNDMYVIDQYMLHLLQDLANKITELYKQYDFGKVVRLLRTFYTRELSHFYFSIIKDRLYC 736

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L   L  IVR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 737 EKENDPRRRSCQTALVEILDVIVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 790

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 791 WISTSSIWK 799


>gi|326476748|gb|EGE00758.1| isoleucyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326484807|gb|EGE08817.1| isoleucyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 1012

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 208/482 (43%), Positives = 281/482 (58%), Gaps = 45/482 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R  AL  + +  K   D     +  ++     F LHDGPPYANG+L
Sbjct: 12  WSSTLKLPKSTFPPRI-ALADQSKYLKRCSDDLYSWQQRNRPATATFTLHDGPPYANGDL 70

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT----P 221
           H+GHALNKILKDII R +L +  +V YVPGWDCHGLPIELK LQ   E     L      
Sbjct: 71  HIGHALNKILKDIICRVQLAKGKRVHYVPGWDCHGLPIELKALQGQKELGDLRLAGRDGA 130

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           +++R+ A + A+ TV  QM  F+ + +  DW+N Y T++ ++E  Q+ VF +M  +G IY
Sbjct: 131 AQIRSAARQLAEKTVSQQMEGFRNWAIMGDWDNAYTTMNKDFERRQLAVFLEMVEKGLIY 190

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL---PDLG 338
           R  KPV+WSPSS TALAEAELEY E H+S +    F + + P   S +L   L    D+ 
Sbjct: 191 RRYKPVYWSPSSSTALAEAELEYKEDHISTAALVKFVLDNLP---SQVLEHPLLAGNDIS 247

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
             +WTTTPWT+PANAA+AVN   +Y +V+                +R G +L  Q ++  
Sbjct: 248 AVIWTTTPWTLPANAALAVNPDFEYTIVD---------------STRHGKLLVAQSRL-- 290

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVH----PVDNRQCPVVIGGDYITTES 454
                L   LE  +    V+   + GS+L N  Y      P   +Q   VI  D++T ++
Sbjct: 291 ---QYLQELLEDDF---TVVIPAIMGSELLNSTYRSHFKGPESEKQ--RVIAADFVTADA 342

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVA 509
           G+G+VH APGHG EDY   L  G+P  +PVD EG+FT+ A        +G  VLGDGN A
Sbjct: 343 GSGIVHCAPGHGMEDYEVCLALGIPAYAPVDGEGRFTQSAMPTKPDLLTGKAVLGDGNHA 402

Query: 510 VVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
           V+KYL E+  LI +  Y+HKYPYDWR+K P I RATEQWFA V   R  A+ A+  V+++
Sbjct: 403 VIKYLSEKGILIHKHAYKHKYPYDWRSKLPVIIRATEQWFADVGDIRGEAIQALQSVQFI 462

Query: 570 PP 571
           PP
Sbjct: 463 PP 464



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 102/188 (54%), Gaps = 10/188 (5%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
           G D LRLW +  DYT DV+IG QVL+ ++    K R T + LLG L D+   N + Y+ L
Sbjct: 678 GPDALRLWAAGSDYTKDVIIGQQVLKAVNISLHKFRVTFKLLLGALQDFDPRNEVPYESL 737

Query: 638 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
             ID+ +L QL N+VK  +E+ +  +FFK    + ++  ++ S FY +  KDRLY    +
Sbjct: 738 HAIDKISLVQLHNLVKTSQEAVDKMEFFKAVTAMNKWANLEFSAFYIEAIKDRLYADSES 797

Query: 698 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV---FESKW 754
             +RR+ QT L      I  ++ PI+P L E+ W++ P       GS   F+   F+  +
Sbjct: 798 GISRRAAQTTLFHIYTHIQSLLGPIVPLLVEETWEHTP-------GSIKGFLKHPFQRTF 850

Query: 755 PVLDEKWR 762
              D KW+
Sbjct: 851 KSPDSKWK 858


>gi|290968697|ref|ZP_06560235.1| isoleucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|335049616|ref|ZP_08542603.1| isoleucine--tRNA ligase [Megasphaera sp. UPII 199-6]
 gi|290781350|gb|EFD93940.1| isoleucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|333762351|gb|EGL39849.1| isoleucine--tRNA ligase [Megasphaera sp. UPII 199-6]
          Length = 932

 Score =  365 bits (937), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 194/470 (41%), Positives = 281/470 (59%), Gaps = 35/470 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFL-RVADKNDGENFVLHDGPPYANGN 164
           Y  T+ LP+T F MR N   REPE  K W +  V+  R+  +  G  F+LHDGPPYANG 
Sbjct: 3   YGKTLHLPETAFPMRGNLPKREPEFLKFWQEQDVYHKRLKKRAGGPKFILHDGPPYANGK 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHALNK+LKDI+ +YK  Q +  +YVPGWD HGLPIE  V+++   + + ++TP +L
Sbjct: 63  LHIGHALNKVLKDIVLKYKTQQGFYTKYVPGWDTHGLPIEHAVIKNTGLN-RHEMTPLEL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   +A   V+ Q   F R+GV  +W +PYLTL    E  QI VFG+M+  G+IY+GK
Sbjct: 122 RKKCRDYALEQVEIQKNDFIRFGVLGEWEHPYLTLQHHIEVEQIGVFGKMAKNGHIYKGK 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA-VWT 343
           K V+W P   TALAEAE+EY E   S SI+  F+ V        +  +  PD   A +WT
Sbjct: 182 KTVYWCPHCETALAEAEIEYKEDK-SFSIFVKFKAVDV---NCHMPKDADPDKVFALIWT 237

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P N A++ NA   Y  V++                    +L  Q++V  ++ + 
Sbjct: 238 TTPWTIPCNLAISANADFTYVWVKVAEEY----------------LLMAQERVDEVMKAA 281

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
            + T E       ++ + + G  LE   + HP   R+ P+++ GD++T ++GTGLVHTAP
Sbjct: 282 DIDTYE-------ILPERMQGKQLEGFIFQHPFYERKAPILL-GDHVTLDAGTGLVHTAP 333

Query: 464 GHGQEDYVTSLKYG---LPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
            HGQ+D+   +KY    +  L  VD+ G++T++   + G+ V  D NV V+K L    +L
Sbjct: 334 DHGQDDFEVCMKYSAWDIKPLGTVDETGRYTDKVPGYEGVFVF-DNNVPVIKKLAAIDAL 392

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             +  + H+YP+ WR K+P I+RATEQWF+SV+G+RQ A+ AI QV+W+P
Sbjct: 393 FAKSTFRHQYPHCWRCKEPIIYRATEQWFSSVDGYRQEALQAIDQVQWIP 442



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 91/215 (42%), Positives = 135/215 (62%), Gaps = 9/215 (4%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    ++G    V PQE    YGADV+RLWVSS DY GD+ + P++L+Q+SD+Y
Sbjct: 597 TVDGEGRKMSKSVGNT--VAPQEVIEKYGADVMRLWVSSADYQGDIRLSPKILKQLSDVY 654

Query: 610 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           RK+R T RYLLG+L D+    +S+ Y+ L  +D++AL +LE + +++ ESYE+YQF  ++
Sbjct: 655 RKIRNTFRYLLGSLADFDPAKDSVPYEALTELDKWALSRLEQVRESVTESYETYQFHVMY 714

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
             I  F  VDLS  Y DV KDRLYT    +  RRS QT +   L ++V+++AP+L   AE
Sbjct: 715 HTIHNFCTVDLSAMYLDVIKDRLYTERQDAPVRRSAQTTIYRILTTLVKIVAPVLSFTAE 774

Query: 729 DVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRT 763
           +VWQ++P     E     E V  + WP    ++R 
Sbjct: 775 EVWQHMP-----ETVDKEESVHLTDWPTAHPEYRN 804


>gi|336395774|ref|ZP_08577173.1| isoleucyl-tRNA synthetase [Lactobacillus farciminis KCTC 3681]
          Length = 925

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 202/468 (43%), Positives = 294/468 (62%), Gaps = 39/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N   +E E  K W++++++ +    N+G+  F L DGPP+ANG
Sbjct: 2   RVKDTLNLGKTKFPMRGNLPNKEAEWEKAWEENKIYEKRQKLNEGKPTFELLDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K++T S+
Sbjct: 62  DIHMGHALNKISKDIIVRYKSMDGFRSPYVPGWDTHGLPIEQQLAKKGVK--RKEMTMSE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA+  +K QMA FKR GV ADW++PY+T   E+E A+++VFG+M  +GYIYRG
Sbjct: 120 YRQLCYEFAEGEIKKQMAGFKRLGVSADWDHPYITYQKEFEEAEVKVFGEMVDKGYIYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WSPSS + LAEAE+EY +   S SI+  F++        G++++   D    +WT
Sbjct: 180 KKPVYWSPSSESTLAEAEVEYKDIK-SPSIFVAFKVRDG----KGVVDD---DASFIIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P+N A+ VN K  YA V                         D KK   +VA +
Sbjct: 232 TTPWTIPSNKAICVNPKFIYAEVN-----------------------ADGKKY--VVAQE 266

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
            +  ++ + G + V I KT  GS+LE     HP  +++  ++I G+++T + GTGLVHTA
Sbjct: 267 RIQYVQEELGWENVEILKTFKGSELEYVTATHPFYDQES-LLILGNHVTLDDGTGLVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PG G +D+V  +KY LP+ SP+D +GKFT+E  ++ G+    D N  + + + E  SL+ 
Sbjct: 326 PGFGADDFVVGMKYKLPVFSPIDAQGKFTDEVPEYQGV-FYDDANKLITERMKENGSLLK 384

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              + H YP+DWRTKKP IFRAT QWFAS++ FRQ  +DAI ++ + P
Sbjct: 385 LSFFTHSYPHDWRTKKPVIFRATPQWFASIDKFRQQILDAIDKIDFKP 432



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 110/184 (59%), Gaps = 9/184 (4%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           +GA+++RLWV+SVD + DV +     +Q+S+ YRK+R T+R++L N  D+    N++SYD
Sbjct: 611 FGAEIIRLWVASVDSSSDVSVSVDSFKQVSETYRKIRNTIRFMLANTTDFDPETNAVSYD 670

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           DL   D+Y   +L N+VK +   Y+ Y F  + + +  FI+ ++S FY D AKD +Y   
Sbjct: 671 DLRPEDKYIKVKLNNLVKEVLSDYDKYDFADVAKNVVSFIVNEMSTFYLDFAKDVVYIDA 730

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             + +RRS QTV+   ++ + +++ PILPH  E VW+ L            EFV  ++ P
Sbjct: 731 EDAHSRRSMQTVIYETVVKLAKLLTPILPHTMEQVWEYLK--------EPEEFVQLAEMP 782

Query: 756 VLDE 759
            ++E
Sbjct: 783 AVEE 786


>gi|327298613|ref|XP_003234000.1| isoleucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326464178|gb|EGD89631.1| isoleucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 1012

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 208/483 (43%), Positives = 281/483 (58%), Gaps = 47/483 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R  AL  + +  K   D     +  ++     F LHDGPPYANG L
Sbjct: 12  WSSTLKLPKSTFPPRI-ALADQSKYLKRCSDDLYSWQQRNRPATATFTLHDGPPYANGEL 70

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDE-----DAKKDLT 220
           H+GHALNKILKDII R +L +  +V YVPGWDCHGLPIELK LQ   E      A +D  
Sbjct: 71  HIGHALNKILKDIICRVQLARGKRVHYVPGWDCHGLPIELKALQGQKELGDLRSAGRD-G 129

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
            +++R+ A + A+ TV  QM  F+ + +  DW N Y T++ ++E  Q+ VF +M  +G I
Sbjct: 130 AAQIRSAARQLAEKTVSQQMEGFRNWAIMGDWENAYTTMNKDFERRQLAVFLEMVEKGLI 189

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL---PDL 337
           YR  KPV+WSPSS TALAEAELEY E H+S +    F + + P   S +L   L    D+
Sbjct: 190 YRRYKPVYWSPSSGTALAEAELEYKEDHISTAALVKFVLDNLP---SQILEHPLLAGSDI 246

Query: 338 GLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVF 397
              +WTTTPWT+PANAA+AVN   +Y +V+                +R G +L  Q ++ 
Sbjct: 247 SAVIWTTTPWTLPANAALAVNPDFEYTIVD---------------STRHGKLLVAQSRL- 290

Query: 398 IIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVH----PVDNRQCPVVIGGDYITTE 453
                 L   LE  +    V+   + GS+L N  Y      P   +Q   +I  D++T +
Sbjct: 291 ----QYLQELLEDDF---TVVIPAIMGSELLNSTYRSHFKGPESEKQ--RIIAADFVTAD 341

Query: 454 SGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNV 508
           +G+G+VH APGHG EDY   L  G+P  +PVD EG+FT+ A        +G +VLGDGN 
Sbjct: 342 AGSGIVHCAPGHGMEDYEACLALGIPAYAPVDGEGRFTQSAMPTKPDLLTGKEVLGDGNH 401

Query: 509 AVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
           AV+KYL E   LI +  Y+HKYPYDWR+K P I RATEQWFA V   R  A+ A+  V++
Sbjct: 402 AVIKYLSETGILIHKHDYKHKYPYDWRSKLPVIIRATEQWFADVGDIRGEAIQALQSVQF 461

Query: 569 VPP 571
           +PP
Sbjct: 462 IPP 464



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 92/158 (58%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
           G D LRLW +  DYT DV+IG QVL+ ++    K R T + LLG L D+   N + Y+ L
Sbjct: 678 GPDALRLWAAGSDYTKDVVIGQQVLKAVNISLHKFRVTFKLLLGALQDFDPRNEVPYESL 737

Query: 638 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
             ID+ AL QL N+VK+ +E+ +  +FFK    + ++  ++ S FY +  KDRLY    +
Sbjct: 738 HAIDKIALVQLHNLVKSSQEAVDKMEFFKAVTAMNKWANLEFSAFYIEAIKDRLYADSES 797

Query: 698 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
             +RR+ QT L      I  ++ PI+P L E+ W++ P
Sbjct: 798 GMSRRAAQTTLFHIYTHIQSLLGPIVPLLVEETWEHTP 835


>gi|317490445|ref|ZP_07948927.1| isoleucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316910438|gb|EFV32065.1| isoleucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 948

 Score =  365 bits (936), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 199/479 (41%), Positives = 281/479 (58%), Gaps = 45/479 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T++LPKT F MRAN    EP+    W++  ++ +V +KN DG+ F+LHDGPPYANG 
Sbjct: 5   YKETMNLPKTDFAMRANLPESEPKRLAKWEEEHIYEQVLEKNKDGKPFILHDGPPYANGP 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA NKILKD +N+    + +   YVPGWDCHG PIE  V ++L  D    +    L
Sbjct: 65  IHIGHAFNKILKDFVNKSHAQRGFFTPYVPGWDCHGQPIEHMVEKTLGPDKMAKIDQPTL 124

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A+  V  Q   FKR GV ADW +PYLT  P YEA  +EVF QM L G +YRG+
Sbjct: 125 RRLCREWAEKYVDVQREGFKRLGVNADWEHPYLTFTPNYEAGNVEVFKQMYLDGLVYRGR 184

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPP--STSGLLNEFLPDLGLAVW 342
           KP+HW     TALAEAE+EY +   S SI+  F+M   P    T+G       D  + +W
Sbjct: 185 KPIHWCKRCHTALAEAEIEYSD-ETSPSIFVKFKMDIMPGMFETAGAAG----DAYVLIW 239

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN AV++     Y +V+         A  +N                +I+A 
Sbjct: 240 TTTPWTLPANTAVSLAPDADYVMVQ---------ADGSN----------------MIMAR 274

Query: 403 DLVPTLE--AKWGTKLVIKK------TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
           +LV  +   A W +  +++        L G +     Y  PV       +I GD++T +S
Sbjct: 275 ELVEQVAEIAGWESYDLVRGEDGEPVALKGREFTGLTYTCPVRQDLKGTIIYGDHVTLDS 334

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           GTG VHTAPGHGQ+DY+ +L++ +P+L PVDD G  T+EAG F+GLDV  + N  ++++L
Sbjct: 335 GTGAVHTAPGHGQDDYLVALEFDVPLLMPVDDNGVLTDEAGPFAGLDV-DEANPVIIEWL 393

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 570
            E+ +L+ ++   H YP+ WR  +P IFRAT+QWF S++    R+ A+ AI   V+W+P
Sbjct: 394 RERGTLVAQKEILHSYPHCWRCHEPVIFRATDQWFVSMDKNSLRENALKAIENDVEWIP 452



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 111/162 (68%), Gaps = 2/162 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS-YD 635
           GADVLRLWV+SVDY+ DV I  ++L++ S+ YR++R T R+LLG+L D+    +++S ++
Sbjct: 635 GADVLRLWVASVDYSQDVSISDEILQRTSEAYRRIRNTFRFLLGSLDDFDDQKDAVSDWN 694

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
            L  +DQ+A+ + ++++ ++  +Y++Y+F  +++ +  +I+ DLS  Y D  KDRLY+  
Sbjct: 695 ALEPLDQWAMVRTKHLLDDVSAAYDAYKFHYVYRAVYDYIVNDLSAVYMDATKDRLYSEA 754

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
             S  RR+ QTVL   L  +VRV+AP+L    ++VW++ P A
Sbjct: 755 PDSPRRRAVQTVLMNILEVLVRVLAPVLSFTTDEVWEHYPQA 796


>gi|325831364|ref|ZP_08164618.1| isoleucine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325486618|gb|EGC89066.1| isoleucine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 948

 Score =  365 bits (936), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 199/479 (41%), Positives = 281/479 (58%), Gaps = 45/479 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T++LPKT F MRAN    EP+    W++  ++ +V +KN DG+ F+LHDGPPYANG 
Sbjct: 5   YKETMNLPKTDFAMRANLPESEPKRLAKWEEEHIYEQVLEKNKDGKPFILHDGPPYANGP 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA NKILKD +N+    + +   YVPGWDCHG PIE  V ++L  D    +    L
Sbjct: 65  IHIGHAFNKILKDFVNKSHAQRGFFTPYVPGWDCHGQPIEHMVEKTLGPDKMAKIDQPTL 124

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A+  V  Q   FKR GV ADW +PYLT  P YEA  +EVF QM L G +YRG+
Sbjct: 125 RRLCREWAEKYVDVQREGFKRLGVNADWEHPYLTFTPNYEAGNVEVFKQMYLDGSVYRGR 184

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPP--STSGLLNEFLPDLGLAVW 342
           KP+HW     TALAEAE+EY +   S SI+  F+M   P    T+G       D  + +W
Sbjct: 185 KPIHWCKRCHTALAEAEIEYSD-ETSPSIFVKFKMDIMPGMFETAGAAG----DAYVLIW 239

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN AV++     Y +V+         A  +N                +I+A 
Sbjct: 240 TTTPWTLPANTAVSLAPDADYVMVQ---------ADGSN----------------MIMAR 274

Query: 403 DLVPTLE--AKWGTKLVIKK------TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
           +LV  +   A W +  +++        L G +     Y  PV       +I GD++T +S
Sbjct: 275 ELVEQVAEIAGWESYDLVRGEDGEPVALKGREFTGLTYTCPVRQDLKGTIIYGDHVTLDS 334

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           GTG VHTAPGHGQ+DY+ +L++ +P+L PVDD G  T+EAG F+GLDV  + N  ++++L
Sbjct: 335 GTGAVHTAPGHGQDDYLVALEFDVPLLMPVDDNGVLTDEAGPFAGLDV-DEANPVIIEWL 393

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 570
            E+ +L+ ++   H YP+ WR  +P IFRAT+QWF S++    R+ A+ AI   V+W+P
Sbjct: 394 RERGTLVAQKEILHSYPHCWRCHEPVIFRATDQWFVSMDKNSLRENALKAIENDVEWIP 452



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 111/162 (68%), Gaps = 2/162 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS-YD 635
           GADVLRLWV+SVDY+ DV I  ++L++ S+ YR++R T R+LLG+L D+    +++S ++
Sbjct: 635 GADVLRLWVASVDYSQDVSISDEILQRTSEAYRRIRNTFRFLLGSLDDFDDQKDAVSDWN 694

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
            L  +DQ+A+ + ++++ ++  +Y++Y+F  +++ +  +I+ DLS  Y D  KDRLY+  
Sbjct: 695 ALEPLDQWAMVRTKHLLDDVSAAYDAYKFHYVYRAVYDYIVNDLSAVYMDATKDRLYSEA 754

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
             S  RR+ QTVL   L  +VRV+AP+L    ++VW++ P A
Sbjct: 755 PDSPRRRAVQTVLMNILEVLVRVLAPVLSFTTDEVWEHYPQA 796


>gi|237734721|ref|ZP_04565202.1| isoleucyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|365831385|ref|ZP_09372937.1| isoleucine-tRNA ligase [Coprobacillus sp. 3_3_56FAA]
 gi|229382049|gb|EEO32140.1| isoleucyl-tRNA synthetase [Coprobacillus sp. D7]
 gi|365261862|gb|EHM91763.1| isoleucine-tRNA ligase [Coprobacillus sp. 3_3_56FAA]
          Length = 909

 Score =  364 bits (935), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 196/466 (42%), Positives = 276/466 (59%), Gaps = 38/466 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   +EP+  + W    ++ RV ++N G E+FV HDGPPYANGN
Sbjct: 3   YKDTLLMPKTEFEMRGNLPKKEPKYVERWQKENMYERVIEQNKGKEDFVFHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGH LNK++KD+I RY  ++     Y+PGWD HGLPIE   +Q L  + KK ++ +  
Sbjct: 63  MHMGHMLNKVIKDVICRYNNMEGRYTPYIPGWDTHGLPIE-NAIQKLGVNRKK-MSTAAF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V  QM    R G +AD+ +PYLTL PE+EA QI+VF +M++ G I++G 
Sbjct: 121 REKCDEYAHEQVNKQMEQLIRMGTFADYKHPYLTLMPEFEANQIDVFAKMAMDGLIFKGL 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S +I+  F    A     G+L+    D    +WTT
Sbjct: 181 KPVYWSPSSESALAEAEIEYHDIK-SPTIFVKF----AVKDGKGILD---TDTSFVIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+ +N +  YA++E                           K  +IV ++L
Sbjct: 233 TPWTIPANLAICLNERYDYALIETT-------------------------KGKLIVLNEL 267

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V +L  K+  T+  + K   GS+LE     HP+ +R+  +VI GD++T E+GTG VHTAP
Sbjct: 268 VDSLMEKFEITEYKVIKNFKGSELELITCQHPLYDRE-SLVILGDHVTAEAGTGCVHTAP 326

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           G G +D+    KYGLP    VD+ G   ++ G++     + D N  V   LDE   L+  
Sbjct: 327 GFGADDFFVGQKYGLPAYCNVDEHGCMMKDCGEWLEGQYVDDANKTVTMKLDELGVLLKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
           E   H YP+DWRTKKP IFRAT+QWF SV+  R+  +  I +V W+
Sbjct: 387 EFITHSYPHDWRTKKPIIFRATDQWFCSVDKIREKLLSEIDKVNWL 432



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 103/161 (63%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +    YGAD++RLW +SV Y  DV I   +++Q+S+ YRK+R T+R++LGNL+D++  
Sbjct: 604 PIKLVNQYGADIVRLWATSVAYQQDVRISNDIMKQISENYRKIRNTMRFVLGNLNDFKQA 663

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
           + ++ + L  +D+Y L QL +++K   ++Y++Y F +  Q+I  +    LS+FY D  KD
Sbjct: 664 DLVAVEALADVDKYMLAQLNDLIKGYHKAYDNYDFAEANQLILNYFTNLLSSFYMDFTKD 723

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
            LY     S  RR  QTVL  H  +++++I+P+L   AE++
Sbjct: 724 ILYIEKADSLRRRQVQTVLYYHAKAMMKLISPVLVFTAEEL 764


>gi|373462942|ref|ZP_09554603.1| isoleucine--tRNA ligase [Lactobacillus kisonensis F0435]
 gi|371765762|gb|EHO54066.1| isoleucine--tRNA ligase [Lactobacillus kisonensis F0435]
          Length = 935

 Score =  364 bits (935), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 200/469 (42%), Positives = 285/469 (60%), Gaps = 36/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E +  K WDD+ V+ +    N G+  F+LHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFKMRGNLPVKEVDRQKAWDDNHVYQQRQKLNQGKPTFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHA+NKI KDII RYK +  ++  YVPGWD HGLPIE K+ Q+  +  +K ++ ++
Sbjct: 62  DIHMGHAMNKISKDIIVRYKSMTGFRAPYVPGWDTHGLPIEQKLTQAGYD--RKKMSTNE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   V+ Q A F+R GV  DW+NPYLTL PE+EA +I VFG  + +G IY+G
Sbjct: 120 FRKLCRDYALKQVERQKAEFRRLGVSGDWDNPYLTLKPEFEAQEIRVFGAFAKRGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY +     + Y   ++V       G+L+    D  + VWT
Sbjct: 180 KKPVYWSWSSESALAEAEVEYHDVTSPTAFYGE-KVVDG----KGVLDN--NDTYMVVWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + V+A   Y+VV+     EG++                      ++AS+
Sbjct: 233 TTPWTIPASEGITVDAGFDYSVVQP----EGETR-------------------HFVIASE 269

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV  +    G + V   KT+ G +LE     HP D+ +  + + GD++  E GTGLVHTA
Sbjct: 270 LVNKVAELVGWQDVKTLKTVKGQELEGVLAEHPFDHSRKLLTMLGDFVDLEEGTGLVHTA 329

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++D+    KYGL I +PVDD+G  T+E+GK F+G+    D N   +  L +   L+
Sbjct: 330 PGYGEDDFNIGRKYGLDIFAPVDDKGYLTKESGKDFAGV-FYDDANKIALDKLKDANLLL 388

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              P +H YP+DWRTKKP IFRAT QWFASV+  +   + ++  V++ P
Sbjct: 389 RYMPLKHSYPFDWRTKKPIIFRATPQWFASVDKIKDDILKSLDDVEFFP 437



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 95/155 (61%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+SVD + DV +  +   ++SD Y+K+R T+RYLL N+ D+    + +++D 
Sbjct: 617 GAEIVRLWVTSVDTSADVRVSTENFVKVSDSYKKIRNTMRYLLANISDFDPKKDQVAFDQ 676

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L   DQY +  L   +   R+ YE Y F  + + +  FI  DLS FY DVAKD +Y    
Sbjct: 677 LETQDQYMMVLLNQFLAEARDCYEKYDFLDLNKKLISFIATDLSAFYLDVAKDIVYIDRK 736

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
               RRS QTV+    +++ +++ P+LPH AE++W
Sbjct: 737 DGHKRRSMQTVMYEAAVTLTKLMTPVLPHTAEEIW 771


>gi|325294834|ref|YP_004281348.1| isoleucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065282|gb|ADY73289.1| Isoleucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 931

 Score =  364 bits (935), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 203/476 (42%), Positives = 281/476 (59%), Gaps = 43/476 (9%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKND-GENFVLHDGPPY 160
           E+  YK T++LPKT+F MR N   +E EI K W++  ++ ++ + +     FVLHDGPPY
Sbjct: 2   EKKDYKDTLNLPKTSFPMRGNLPKKEKEILKYWNEIDLYNKLLESHKYDRKFVLHDGPPY 61

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG++H+GHALNKILKDI+ + K +Q Y+  +VPGWDCHGLPIE  V Q L +  K ++ 
Sbjct: 62  ANGHIHIGHALNKILKDIVVKSKSMQGYQTPFVPGWDCHGLPIERAVFQKLKK-RKDEVD 120

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
           P  +R K  ++A   V  Q   F R GV  DW NPY+T+DP+Y+A  +   G+   +G +
Sbjct: 121 PIDVRKKCREYATNWVNIQREEFIRLGVIGDWKNPYITMDPKYQADIVRELGKFYERGLV 180

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD-LGL 339
           +R KKPV+W P+  TALAEAE+EY +  VS SIY  F++++      G+    LP+   L
Sbjct: 181 HRAKKPVYWCPNCVTALAEAEIEYAD-EVSPSIYVAFKIIN----DKGI---NLPENTYL 232

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN AVAVN +L+Y V                        L   +K FII
Sbjct: 233 VIWTTTPWTLPANVAVAVNPELEYVV------------------------LNSGEKHFII 268

Query: 400 VASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
            A  L+     K        KT  G +LE  +Y HP  +R+  V +  DY+  ++GTGLV
Sbjct: 269 -AKSLLEDFREKTDLLGETVKTFKGIELEGIKYEHPFIDREGQVTLA-DYVAADTGTGLV 326

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKF-SGLDVLGDGNVAVVKYLDEQM 518
           H APGHG+EDY   LKY LP+L PVDD GKFT+EA  +  GL +  + N  ++K L E  
Sbjct: 327 HIAPGHGEEDYQVGLKYNLPVLVPVDDYGKFTDEAPSWLKGLKIW-EANPVIIKRLKEIG 385

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG----FRQAAMDAIGQVKWVP 570
           +L+      H YP+ WR K   IFRAT QWF  ++      R+ A+  I +V+W+P
Sbjct: 386 ALLFAGEINHSYPHCWRCKGKVIFRATPQWFIVMDKGNPTLREVALKEIDKVQWIP 441



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 126/215 (58%), Gaps = 12/215 (5%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P      +GAD+LRLWV+S ++T DV I   +L+Q++++Y+K+R T R++LGNL D+   
Sbjct: 614 PEDVVKKFGADILRLWVASENFTEDVKISENILKQVAEVYKKIRNTFRFMLGNLSDFTPE 673

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
            S+ YD+L  ID++A+ +   + K I ++Y SY+F KI+++I  +   +LS+ Y D+ KD
Sbjct: 674 ESLVYDELEEIDKWAINRFSILAKEIIDAYNSYKFNKIYRLIYDYCATELSSIYLDILKD 733

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 749
            LY     S  R+S QT +   L  +  +IAPIL   AE+++  +P       G   E V
Sbjct: 734 TLYCEAPNSKKRKSAQTAIYKILYGLTTLIAPILSFTAEEIYSYIP-------GREKESV 786

Query: 750 FESKWPVLDEKWRTFPVGEIY-FWGKILEVIVVVT 783
           F  ++P+  E     P GE+   W K+++V  +V 
Sbjct: 787 FLEEFPLFCES----PDGELLERWEKLMKVKSLVN 817


>gi|408792230|ref|ZP_11203840.1| isoleucine--tRNA ligase [Leptospira meyeri serovar Hardjo str. Went
           5]
 gi|408463640|gb|EKJ87365.1| isoleucine--tRNA ligase [Leptospira meyeri serovar Hardjo str. Went
           5]
          Length = 913

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 197/471 (41%), Positives = 284/471 (60%), Gaps = 43/471 (9%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVAD-KNDGENFVLHDGPPYA 161
           E  Y  TV LP+T F M+A+   REP   K+W + +VF ++ + +    +FVLHDGPPYA
Sbjct: 7   ENPYSKTVLLPQTNFPMKADLANREPGQIKIWKEKKVFQKMKEIRKSKPSFVLHDGPPYA 66

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NGN H+GH+LNKILKDII + K L  ++   +PGWDCHGLPIE++VL++L ++A ++ +P
Sbjct: 67  NGNFHVGHSLNKILKDIIVKSKTLSGFQTDMIPGWDCHGLPIEVQVLKNLGKEA-RNTSP 125

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           S+LR K  ++A   V  Q     R+  + +  N YLT+ PE+EA  +EVFG +  +GYIY
Sbjct: 126 SELRKKCREYAAEFVGKQGEDLSRFLCFWEEGNKYLTMAPEFEARIVEVFGSLFEKGYIY 185

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           +GKKPV+W     TA AEAE+EY + HVS SIY  F  V     T  L           +
Sbjct: 186 KGKKPVYWCIDLATAHAEAEIEY-QNHVSPSIYVKF-AVKGENDTYCL-----------I 232

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN A+  N +L Y      SL + D+                     +I+A
Sbjct: 233 WTTTPWTLPANLAICFNEELDY------SLFQSDTHGR------------------LILA 268

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
             L  ++E K G  L   K+L+ +DL+   ++HP   R+  + + G+++T ++GTG VHT
Sbjct: 269 DGLKESVEQKTGITLTKIKSLSSADLKQMTFLHPFIERE-SIPLFGNHVTLDAGTGCVHT 327

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG +DY      GLP LSPVDD G++T+E     G+ +  D N  +V+ L E+ +L+
Sbjct: 328 APGHGTDDYRVGTAAGLPPLSPVDDYGRYTDEFEMMKGIKIW-DANPKIVELLKEKNALV 386

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
               + H YP+ WR+KKP IFRAT QWF S++  G R+ ++ AI +V+W+P
Sbjct: 387 HYSEFTHSYPHSWRSKKPLIFRATPQWFFSIDHAGLREESLKAIDKVQWIP 437



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 101/155 (65%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 636
           YGAD+LRLWVS+ D+  DV IG   ++ +++ YRK+R T RYLLGN     +G  +  +D
Sbjct: 617 YGADILRLWVSTQDFRDDVKIGKDSIKTVAEAYRKIRNTFRYLLGNTKAEVLGWKLKKED 676

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  ID++ L +L  + +++++ YE+YQF  ++  +  F  VDLS  YF++ +DR+Y  G 
Sbjct: 677 IESIDKFYLHKLAKLNEDVKKLYENYQFHLVYHRVLVFCTVDLSQEYFEIIRDRMYCDGK 736

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S TR+S + VL+  L ++ +++APIL    E+VW
Sbjct: 737 NSKTRKSSEYVLAVILETLTKILAPILSFTTEEVW 771


>gi|94267665|ref|ZP_01290951.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93451903|gb|EAT02631.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 946

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 209/481 (43%), Positives = 278/481 (57%), Gaps = 49/481 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           Y+ T++LP+T F M+AN   REPE+ K W    ++  +     G   ++LHDGPPYANG+
Sbjct: 3   YRDTLNLPQTAFKMKANLAQREPEMLKRWQQEDLYGAIDRATAGRPLYILHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKDII + K +  Y   YVPGWDCHGLPIEL V + L    K ++     
Sbjct: 63  LHMGHALNKILKDIILKAKRMSGYHCPYVPGWDCHGLPIELNVDKELGSK-KAEVDKLAF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   +  Q   F R GV ADW  PYLT+D  YEAA    F    L G I R +
Sbjct: 122 RETCRRYAAKWIAIQREEFARLGVLADWQQPYLTIDYSYEAAIAREFNNFLLNGAISRSR 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD---LGLAV 341
           KPVHW  S  TALAEAE+EY E H S SIY  F +  A  + +  + E   D   L + +
Sbjct: 182 KPVHWCASCTTALAEAEVEYAEQH-SPSIYVKFPLAPA--TLAAAVPELAADQRPLAVVI 238

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN AVA++    YA VE                   G +L        I+A
Sbjct: 239 WTTTPWTLPANLAVALHPDFTYAAVE-----------------HDGEIL--------IMA 273

Query: 402 SDLVPTLEAKWGT---KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           ++LV  + A+ G    KL+     A    ++CR  HP+  RQ  ++I  DY+T ESG+G 
Sbjct: 274 AELVERVMAECGLSDYKLLASFPAAALLGQSCR--HPLLERQ-SLLIAADYVTLESGSGC 330

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQM 518
           VHTAPGHG++DY++ LK+ LPILSPVD+ G FT EAG + GL +L  GN  ++  L    
Sbjct: 331 VHTAPGHGRDDYLSGLKHHLPILSPVDERGHFTGEAGPYEGLFIL-KGNKRIIADLQAGG 389

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG---------FRQAAMDAIGQVKWV 569
           +L+ E+   H YP+ WR KKP +FRATEQWF +++           R+ A+ AI +V+W+
Sbjct: 390 ALLGEQAITHSYPHCWRCKKPVMFRATEQWFIAMDAAAGDDPEQTLRRRALAAIDEVEWI 449

Query: 570 P 570
           P
Sbjct: 450 P 450



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 106/185 (57%), Gaps = 2/185 (1%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 611
           V+G  +    ++G V   P +    +GA++LRLW +S DY  D+ I   +LRQ++D YRK
Sbjct: 605 VDGQGKKMSKSVGNVI-APDKIIKQHGAEILRLWAASEDYRDDIRISENILRQLADAYRK 663

Query: 612 LRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 670
            R T+R++LGNLHD+    +    + +  +D++ L + E   +  +ESY+ ++F + +  
Sbjct: 664 TRNTIRFMLGNLHDFEPARHRRPAEGMAELDRWILARFELFRQKSQESYDKFEFHQFYHQ 723

Query: 671 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
           +  F  V LS  Y D+ KDRLY        RR  Q+VL      ++R++AP+L  LA + 
Sbjct: 724 LYNFCTVSLSALYLDIVKDRLYILPPADPRRRDAQSVLYEICDGLLRLLAPVLSFLAAEA 783

Query: 731 WQNLP 735
           W++LP
Sbjct: 784 WEHLP 788


>gi|225018393|ref|ZP_03707585.1| hypothetical protein CLOSTMETH_02340 [Clostridium methylpentosum
           DSM 5476]
 gi|224948811|gb|EEG30020.1| hypothetical protein CLOSTMETH_02340 [Clostridium methylpentosum
           DSM 5476]
          Length = 928

 Score =  364 bits (935), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 199/483 (41%), Positives = 281/483 (58%), Gaps = 42/483 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           Y  T+ LPKT F MR N   R+ E+ K +DD +++ ++ + N+G+  ++LHDGPPYANG 
Sbjct: 5   YNKTIHLPKTDFPMRGNLPKRDQELFKKYDDERLYYKMIENNEGKPLYILHDGPPYANGA 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G ALNK+LKD I + K +  YK  Y+PGWD HGLPIELK L+S   D K  +TP +L
Sbjct: 65  IHLGTALNKVLKDFIVKQKNMSGYKAPYIPGWDTHGLPIELKALKSAGAD-KNTITPVEL 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A + V+ Q A FK  GV  D+ NPYLTL PE+EA QIE+FG+M+ + +IY+G 
Sbjct: 124 RKVCKDYALSHVENQKAQFKSLGVLGDYENPYLTLRPEFEARQIEIFGEMAKRDFIYKGL 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD---LGLAV 341
           KPV+W P   TALAEAE+EY E     SIY  F    A     G   +   D   +   +
Sbjct: 184 KPVYWCPECDTALAEAEIEYAEDPC-YSIYVKF----AVTDDKGFFEKQGIDKNKVFFVI 238

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTT WT+P N A+ +     Y +V                        K+ ++ +++  
Sbjct: 239 WTTTTWTLPGNLAICLGPNYDYTLV------------------------KNGEEYYVMAR 274

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
             + P +EA       +  + AGS+ E  +  HP  +R+  +VI GD++T ESGTG VHT
Sbjct: 275 ELVAPAMEAAKIEGYEMVGSFAGSEFEYMKCAHPFLDRE-SLVIVGDHVTLESGTGCVHT 333

Query: 462 APGHGQEDYVTSLKY-GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           APGHG ED+     Y  +PI+ PVD  G  T+EAG+F GL    D N A+ K L+E  +L
Sbjct: 334 APGHGVEDFEVCKHYPEIPIVVPVDSNGVLTKEAGEFQGLKT-DDANKAIAKKLEETGNL 392

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGAD 580
              +   H+YP+ WR K P I+RATEQWF S++ F++ A+ AI  V W+     PG+G +
Sbjct: 393 FAIQKIIHQYPHCWRCKSPIIYRATEQWFCSIDDFKEDAVKAITDVNWI-----PGWGEE 447

Query: 581 VLR 583
            ++
Sbjct: 448 RIK 450



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 114/193 (59%), Gaps = 6/193 (3%)

Query: 544 ATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLR 603
            T  W    EG +   M    Q    P +    YG D+LRLWV+S DY  DV I P++L+
Sbjct: 592 CTHGWVVDGEGRK---MSKSMQNGVAPEKIISQYGTDILRLWVASSDYHADVRISPEILK 648

Query: 604 QMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESY 662
           Q+S+ YRK+R T R++LGN+ D+    + +    L  ID++AL +L+ ++K + E+Y ++
Sbjct: 649 QLSEAYRKIRNTARFILGNISDFDPNTDKVDNSSLHEIDKWALVKLDALIKKVNEAYNAF 708

Query: 663 QFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPI 722
            F  I+  I  F +VD+SNFY D+ KDRLY G      RR+ QT +   L S+ R+IAPI
Sbjct: 709 DFHIIYHAIHNFCVVDMSNFYLDIIKDRLYCGNMED--RRAAQTAMYVILDSLTRLIAPI 766

Query: 723 LPHLAEDVWQNLP 735
           L   +E++W  LP
Sbjct: 767 LAFTSEEIWSFLP 779


>gi|343492205|ref|ZP_08730578.1| isoleucyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
 gi|342827545|gb|EGU61933.1| isoleucyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
          Length = 947

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 203/475 (42%), Positives = 287/475 (60%), Gaps = 33/475 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W    ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLANREPEMLKRWYKEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A+  V+ Q  SFKR G+  +W+ PY T+D   EA  I   G+++ QG++ +G 
Sbjct: 123 RDKCRQYAQGQVEGQKESFKRLGILGEWDKPYRTMDFATEANIIRALGKIADQGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFR------MVSAPPSTSGLLNEFLPDLG 338
           KPVHW     +ALAEAE+EY +  VS SI   F+      ++S    T G  +E   D+ 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVRFKAADEAALLSKFNLTEG--HEGQGDIS 239

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           + +WTTTPWT+PAN AV +   L+Y +++     EGD ++  NK  R            I
Sbjct: 240 IVIWTTTPWTLPANRAVCLRDDLEYVLIQT----EGDDSSE-NKAER------------I 282

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           IVAS+L   +  + G +       A G+DLE  ++ HP  +   P ++ GD++TTESGTG
Sbjct: 283 IVASELAKDVMDRAGIENFHNLGFAKGADLELTQFNHPFYDFSVPAIL-GDHVTTESGTG 341

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
           +VHTAPGHGQED+    KYGL + +PV   G +  +   F+G  V    N AVV+ L E+
Sbjct: 342 VVHTAPGHGQEDFAVGQKYGLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVVEVLRER 400

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            +L+    YEH YP+ WR K P IFRAT QWF S++  G R  A++AI  V+W+P
Sbjct: 401 GALLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALEAIKGVQWMP 455



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 116/205 (56%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 606 VDGHGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 663

Query: 611 KLRGTLRYLLGNLHDWRVGNSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL  +     I   D++  +D++A+ +     + I ++Y+ Y    + Q
Sbjct: 664 RIRNTSRFFLANLSGFNPETDIVPADEMVALDRWAVGRALAAQEEIIKAYDEYNTHAVMQ 723

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  +++ +FY D+ KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 724 RLMQFCSIEMGSFYLDIIKDRQYTAKRGGHAQRSCQTALYYIVEALVRWMAPIMSFTADE 783

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 784 IWNQMP-------GERGKFVFADEW 801


>gi|299535884|ref|ZP_07049204.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
 gi|424738824|ref|ZP_18167253.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZB2]
 gi|298728636|gb|EFI69191.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
 gi|422947308|gb|EKU41705.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZB2]
          Length = 922

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 195/469 (41%), Positives = 278/469 (59%), Gaps = 43/469 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR N    EP++ + W+   +     ++ +G   FVLHDGPPYANG+
Sbjct: 4   YKDTLLMPKTDFPMRGNLPANEPKMQEKWNGMDINKLQMERTEGRPEFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           +H+GHALNK+LKD+I R++ +  Y V Y+PGWD HGLPIE    Q+L      +K+++ +
Sbjct: 64  IHIGHALNKVLKDMITRHRSMTGYHVNYIPGWDTHGLPIE----QALTNKGVKRKEMSVA 119

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
             R    ++A   +  Q   F+R G+  DW NPY+TL PE+EA QIEVFG+M+ +GYIY+
Sbjct: 120 AFRQLCEEYAYEQIDNQRTQFRRLGIRGDWENPYITLKPEFEARQIEVFGKMAEKGYIYK 179

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WSPSS +ALAEAE+EY +   S SIY  F +  A             D    +W
Sbjct: 180 GLKPVYWSPSSESALAEAEIEYKDIK-SPSIYVSFAIKDAKGVVPA-------DAKFIIW 231

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  +++N +  Y VV           A ANKK               I+A 
Sbjct: 232 TTTPWTLPANLGISLNPEFIYVVV-----------AVANKK--------------FIIAK 266

Query: 403 DLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +L+ ++    G     + + + G  L+     HP  +R+  +++ G+++T E+GTG VHT
Sbjct: 267 ELLESVATTLGWVDYEVVQEVKGEALDRIVAQHPFYDRESLIMV-GEHVTAEAGTGCVHT 325

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY    +YGL ILSP+D+ G +T+EA  F G+    D N  V + L E  +L 
Sbjct: 326 APGHGEDDYHIGKQYGLGILSPLDNSGCYTDEAPGFEGV-FYNDANKLVTEKLKEVGALE 384

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP I+RAT QWFASVE FR   ++A+    + P
Sbjct: 385 KLDFFTHSYPHDWRTKKPVIYRATPQWFASVEAFRGELLEAVKATAFTP 433



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 115/167 (68%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           +P +    YGAD+LRLWV+SVDYT DV I   +L+Q+S++YRK+R T R+L GN+ D+  
Sbjct: 603 IPQKVMDQYGADILRLWVASVDYTADVRISMDMLKQVSEVYRKIRNTFRFLHGNIADFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + +SY +L  +DQY   +L++++K +R +Y+ Y F  ++ ++  F+ V+LS+FY D+A
Sbjct: 663 KKDRVSYAELREMDQYVYMRLQDVLKTVRAAYDRYDFAAVYHVVNNFVAVELSSFYLDIA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y  G  +  RR+ QTV+   L+++V+++ PI+PH  +++W  L
Sbjct: 723 KDVVYIEGHDNKDRRAMQTVIYDTLMTLVKIMTPIIPHTTDEMWSYL 769


>gi|385823183|ref|YP_005859525.1| isoleucyl-tRNA synthetase [Lactobacillus casei BD-II]
 gi|327385510|gb|AEA56984.1| Isoleucyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 948

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 197/469 (42%), Positives = 282/469 (60%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ KT+F MRA     EP   K WD+  V+ +    N+G+  F+LHDGPP+ANG
Sbjct: 22  KIKDTLNMGKTSFPMRAGLPKNEPIWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANG 81

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K+++ + 
Sbjct: 82  NIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVK--RKEMSMTD 139

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA   +  Q   FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G
Sbjct: 140 YRELCRQFAMQEIDKQRTDFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHG 199

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS + LAEAE+EY +   S SIY  F++V       GLL+    D  L +WT
Sbjct: 200 LKPVYWSWSSESTLAEAEIEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWT 251

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN +  Y  V++            +KK               +VA++
Sbjct: 252 TTPWTIPANYGITVNPRFDYVQVQV-----------GDKK--------------YVVAAE 286

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    ++ KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHT
Sbjct: 287 LLDRVAEEIGWENPKIL-KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHT 344

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY   +KYGLP++S VD +G   E A  F G+    D N  + + L ++ +L+
Sbjct: 345 APGHGEDDYKVGVKYGLPVVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALL 403

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 404 KLDFFTHSYPHDWRTKKPVIFRATTQWFASIDAFRDQILKAIDTVDFKP 452



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 119/194 (61%), Gaps = 5/194 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 623 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 682

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 683 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 742

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 744
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 743 KDVVYIEAKDDPKRRGMQTVMFAALLTVTKLITPILPHTAEEVWPYLKQPEAYAALADMP 802

Query: 745 AAEFVFESKWPVLD 758
            AE  F+ +  +LD
Sbjct: 803 EAE-QFDDESQLLD 815


>gi|227535231|ref|ZP_03965280.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|227187115|gb|EEI67182.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
          Length = 948

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 197/469 (42%), Positives = 282/469 (60%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ KT+F MRA     EP   K WD+  V+ +    N+G+  F+LHDGPP+ANG
Sbjct: 22  KIKDTLNMGKTSFPMRAGLPKNEPIWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANG 81

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K+++ + 
Sbjct: 82  NIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVK--RKEMSMTD 139

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA   +  Q   FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G
Sbjct: 140 YRELCRQFAMQEIDKQRTDFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHG 199

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS + LAEAE+EY +   S SIY  F++V       GLL+    D  L +WT
Sbjct: 200 LKPVYWSWSSESTLAEAEIEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWT 251

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN +  Y  V++            +KK               +VA++
Sbjct: 252 TTPWTIPANYGITVNPRFDYVQVQV-----------GDKK--------------YVVAAE 286

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    ++ KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHT
Sbjct: 287 LLDRVAEEIGWENPKIL-KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHT 344

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY   +KYGLP++S VD +G   E A  F G+    D N  + + L ++ +L+
Sbjct: 345 APGHGEDDYKVGVKYGLPVVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALL 403

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 404 KLDFFTHSYPHDWRTKKPVIFRATTQWFASIDAFRDQILKAIDTVDFKP 452



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/194 (39%), Positives = 118/194 (60%), Gaps = 5/194 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 623 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 682

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++YD+L  +D+Y + +L  I+K I+ +Y+ Y F  + + I  F++ DLS FY DVA
Sbjct: 683 EKDTVAYDELGSVDRYMMVRLNQIIKQIKTAYDVYDFATVEKTISSFLVNDLSAFYLDVA 742

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 744
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 743 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 802

Query: 745 AAEFVFESKWPVLD 758
            AE  F+ +  +LD
Sbjct: 803 EAE-QFDDESQLLD 815


>gi|417992794|ref|ZP_12633146.1| isoleucyl-tRNA synthetase [Lactobacillus casei CRF28]
 gi|410532585|gb|EKQ07287.1| isoleucyl-tRNA synthetase [Lactobacillus casei CRF28]
          Length = 928

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 197/469 (42%), Positives = 282/469 (60%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ KT+F MRA     EP   K WD+  V+ +    N+G+  F+LHDGPP+ANG
Sbjct: 2   KIKDTLNMGKTSFPMRAGLPKNEPIWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K+++ + 
Sbjct: 62  NIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVK--RKEMSMTD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA   +  Q   FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G
Sbjct: 120 YRELCRQFAMQEIDKQRTDFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS + LAEAE+EY +   S SIY  F++V       GLL+    D  L +WT
Sbjct: 180 LKPVYWSWSSESTLAEAEIEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN +  Y  V++            +KK               +VA++
Sbjct: 232 TTPWTIPANYGITVNPRFDYVQVQV-----------GDKK--------------YVVAAE 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    ++ KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHT
Sbjct: 267 LLDRVAEEIGWENPKIL-KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY   +KYGLP++S VD +G   E A  F G+    D N  + + L ++ +L+
Sbjct: 325 APGHGEDDYKVGVKYGLPVVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 384 KLDFFTHSYPHDWRTKKPVIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 119/194 (61%), Gaps = 5/194 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVTTVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++Y++L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYNELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 744
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 745 AAEFVFESKWPVLD 758
            AE  F+ +  +LD
Sbjct: 783 EAE-QFDDESQLLD 795


>gi|301066333|ref|YP_003788356.1| isoleucyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|300438740|gb|ADK18506.1| Isoleucyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 948

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 197/469 (42%), Positives = 282/469 (60%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ KT+F MRA     EP   K WD+  V+ +    N+G+  F+LHDGPP+ANG
Sbjct: 22  KIKDTLNMGKTSFPMRAGLPKNEPIWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANG 81

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K+++ + 
Sbjct: 82  NIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVK--RKEMSMTD 139

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA   +  Q   FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G
Sbjct: 140 YRELCRQFAMQEIDKQRTDFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHG 199

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS + LAEAE+EY +   S SIY  F++V       GLL+    D  L +WT
Sbjct: 200 LKPVYWSWSSESTLAEAEIEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWT 251

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN +  Y  V++            +KK               +VA++
Sbjct: 252 TTPWTIPANYGITVNPRFDYVQVQV-----------GDKK--------------YVVAAE 286

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    ++ KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHT
Sbjct: 287 LLDRVAEEIGWENPKIL-KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHT 344

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY   +KYGLP++S VD +G   E A  F G+    D N  + + L ++ +L+
Sbjct: 345 APGHGEDDYKVGVKYGLPVVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALL 403

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 404 KLDFFTHSYPHDWRTKKPVIFRATTQWFASIDAFRDQILKAIDTVDFKP 452



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 119/194 (61%), Gaps = 5/194 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 623 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 682

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 683 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 742

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 744
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 743 KDVVYIEAKDDAKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 802

Query: 745 AAEFVFESKWPVLD 758
            AE  F+ +  +LD
Sbjct: 803 EAE-QFDDESQLLD 815


>gi|417998986|ref|ZP_12639199.1| isoleucyl-tRNA synthetase [Lactobacillus casei T71499]
 gi|410539926|gb|EKQ14448.1| isoleucyl-tRNA synthetase [Lactobacillus casei T71499]
          Length = 928

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 197/469 (42%), Positives = 282/469 (60%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ KT+F MRA     EP   K WD+  V+ +    N+G+  F+LHDGPP+ANG
Sbjct: 2   KIKDTLNMGKTSFPMRAGLPKNEPIWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K+++ + 
Sbjct: 62  NIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVK--RKEMSMTD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA   +  Q   FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G
Sbjct: 120 YRELCRQFAMQEIDKQRTDFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS + LAEAE+EY +   S SIY  F++V       GLL+    D  L +WT
Sbjct: 180 LKPVYWSWSSESTLAEAEIEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN +  Y  V++            +KK               +VA++
Sbjct: 232 TTPWTIPANYGITVNPRFDYVQVQV-----------GDKK--------------YVVAAE 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    ++ KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHT
Sbjct: 267 LLDRVAEEIGWENPKIL-KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY   +KYGLP++S VD +G   E A  F G+    D N  + + L ++ +L+
Sbjct: 325 APGHGEDDYKVGVKYGLPVVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 384 KLDFFTHSYPHDWRTKKPVIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 119/194 (61%), Gaps = 5/194 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 744
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 745 AAEFVFESKWPVLD 758
            AE  F+ +  +LD
Sbjct: 783 EAE-QFDDESQLLD 795


>gi|239631632|ref|ZP_04674663.1| isoleucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|417980578|ref|ZP_12621258.1| isoleucyl-tRNA synthetase [Lactobacillus casei 12A]
 gi|239526097|gb|EEQ65098.1| isoleucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|410524901|gb|EKP99808.1| isoleucyl-tRNA synthetase [Lactobacillus casei 12A]
          Length = 928

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 197/469 (42%), Positives = 282/469 (60%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ KT+F MRA     EP   K WD+  V+ +    N+G+  F+LHDGPP+ANG
Sbjct: 2   KIKDTLNMGKTSFPMRAGLPKNEPIWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K+++ + 
Sbjct: 62  NIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVK--RKEMSMTD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA   +  Q   FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G
Sbjct: 120 YRELCRQFAMQEIDKQRTDFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS + LAEAE+EY +   S SIY  F++V       GLL+    D  L +WT
Sbjct: 180 LKPVYWSWSSESTLAEAEIEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN +  Y  V++            +KK               +VA++
Sbjct: 232 TTPWTIPANYGITVNPRFDYVQVQV-----------GDKK--------------YVVAAE 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    ++ KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHT
Sbjct: 267 LLDRVAEEIGWENPKIL-KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY   +KYGLP++S VD +G   E A  F G+    D N  + + L ++ +L+
Sbjct: 325 APGHGEDDYKVGVKYGLPVVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 384 KLDFFTHSYPHDWRTKKPVIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 119/194 (61%), Gaps = 5/194 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 744
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDAKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 745 AAEFVFESKWPVLD 758
            AE  F+ +  +LD
Sbjct: 783 EAE-QFDDESQLLD 795


>gi|308274791|emb|CBX31390.1| Isoleucyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 942

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 208/475 (43%), Positives = 282/475 (59%), Gaps = 46/475 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVF--LRVADKNDGENFVLHDGPPYANG 163
           YK T++LP T F M+A+   REP I K W+D+ ++  +RVA K D E F+LHDGPPYANG
Sbjct: 3   YKKTLNLPVTDFAMKADLAKREPIILKEWEDNDLYNKIRVASK-DRELFILHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+G ALNKILKDII R + + N+   YVPGWDCHGLPIE  V + L  +AKK  + S+
Sbjct: 62  NIHIGTALNKILKDIIVRSRQMANFNAVYVPGWDCHGLPIEHNVDKELGSEAKK-YSQSR 120

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
           +R    ++A+  V  Q   FKR GV A+W+NPYLT+  EYEA       +  L+G ++R 
Sbjct: 121 IRKLCRQYAEKYVNIQREEFKRLGVLAEWDNPYLTMAYEYEAIIARECIKFGLEGSLFRS 180

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG----- 338
           KKP+HW  S +TALAEAE+EY E   S S++  F +       S  +++ +P+L      
Sbjct: 181 KKPIHWCCSCKTALAEAEIEY-EDEKSPSVFVKFLL-------SDDVSKEIPELSGKKTY 232

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           + +WTTTPWT+PAN AVA++   +Y  +E                   GN      +VFI
Sbjct: 233 VVIWTTTPWTIPANLAVALHPDFKYVAIET------------------GN-----NEVFI 269

Query: 399 IVASDLVPTLEAKWGT-KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           I ASDL       +      I   +    LE    +HP+ NR+  ++I G ++T ++GTG
Sbjct: 270 I-ASDLAEKCMKIFSIPDYSILCEITAKQLEKKHCLHPLYNRE-SLIILGTHVTLDAGTG 327

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
            VHTAPGHG+EDY   L YGL   SPVDD G FT++   F G  V    N  +V  L + 
Sbjct: 328 CVHTAPGHGREDYEVGLSYGLDTYSPVDDNGCFTDDVEFFKGKFVF-KANSDIVSKLKDS 386

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            SL+ EE   H YP+ WR KKP IFRAT QWF S++  G R+ +++ I +VKWVP
Sbjct: 387 GSLVAEENISHSYPHCWRCKKPVIFRATPQWFISMDKTGLRKKSLEEIDRVKWVP 441



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/219 (40%), Positives = 131/219 (59%), Gaps = 8/219 (3%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +    YGA++LRLWVS+ DY  D+ I   +L+Q+SD YR++R T R++LGNL+D+   
Sbjct: 614 PKKVIDKYGAEILRLWVSASDYRDDIRISDNILKQLSDAYRRIRNTCRFMLGNLYDFDPA 673

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + +SYD +P ID+YALF+L  + +    +Y+ Y+F  I+  +  +   DLS FY D+ K
Sbjct: 674 KDKVSYDLMPEIDRYALFRLSELTEKTARAYDLYEFHTIYHSLYNYCTTDLSAFYLDILK 733

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 748
           DRLYT    S  RRS QTV+   L SI R++APILP  +ED+W+ +      E     E 
Sbjct: 734 DRLYTSFPESLERRSAQTVMYLILDSITRIMAPILPFTSEDIWKAMS-----EYKGKEEN 788

Query: 749 VFESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNE 787
           V  +  P + ++W+   + E   W KI+EV   VT + E
Sbjct: 789 VHLALLPAVSKQWKDTVIAE--NWKKIIEVRGEVTRVLE 825


>gi|227498594|ref|ZP_03928738.1| isoleucyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|352684220|ref|YP_004896205.1| isoleucyl-tRNA synthetase [Acidaminococcus intestini RyC-MR95]
 gi|226904050|gb|EEH89968.1| isoleucyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|350278875|gb|AEQ22065.1| isoleucyl-tRNA synthetase [Acidaminococcus intestini RyC-MR95]
          Length = 934

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 212/538 (39%), Positives = 298/538 (55%), Gaps = 63/538 (11%)

Query: 101 KEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPP 159
           KE   Y  T++LP T F MRA    REP+    W +  ++ +    + G + F+LHDGPP
Sbjct: 3   KENEGYGSTLNLPATDFPMRAGLPKREPDFLTFWKEKGIYQKKLKAHAGHKKFILHDGPP 62

Query: 160 YANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDL 219
           YANG +H+GHALNKILKDII +YK  + +   Y PGWD HG+PIE   L+ +  D  K L
Sbjct: 63  YANGKIHLGHALNKILKDIILKYKYARGFDTPYTPGWDTHGMPIEHACLKEVGVDRHK-L 121

Query: 220 TPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGY 279
           +  +LR     +A   +  Q   FKR GV  DW++PY+T+ P +EA QI VFG+M+ +GY
Sbjct: 122 SALELRRMCHDYALKWINIQREGFKRLGVQGDWDHPYITMKPAFEAEQIRVFGEMAHKGY 181

Query: 280 IYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSA----PPSTSGLLNEFLP 335
           IY+GKK V+W P   TALAEAE+EY +   + +IY    +V A    P    G       
Sbjct: 182 IYKGKKTVYWCPHCETALAEAEIEYAD-QKTPTIYVKIPLVDAKDKAPEGAQG------K 234

Query: 336 DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
              + +WTTTPWT+PAN AV VN   +YA VE      GD                    
Sbjct: 235 KTSMVIWTTTPWTIPANVAVTVNPDFEYAWVEY-----GDEV------------------ 271

Query: 396 VFIIVASDLVPTLEAKWGTKLVIKKTLA---GSDLE--NCRYVHPVDNRQCPVVIGGDYI 450
             +I+AS+LV  +  + G  ++  K L    G D+E   C +  P  N +  +V  GDY+
Sbjct: 272 --LIMASELVGKVAEECG--IIFGKVLGTTKGRDMEFMECEHPFPEYNHRKSLVCLGDYV 327

Query: 451 TTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVA 509
             E+GTG VHTAPGHG  DY+T LKY L IL PVD++G +T+EAG+ F G  V  D N  
Sbjct: 328 DLETGTGCVHTAPGHGDVDYLTGLKYHLDILCPVDEKGCYTDEAGEAFKGHFVF-DSNGL 386

Query: 510 VVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQVKW 568
           V+K+L E   L+ ++   H+Y + WR K P I+RA+EQWF SV+GFR+ A+ AI   V+W
Sbjct: 387 VIKHLAETGHLLGKKSIHHQYAHCWRCKNPIIYRASEQWFCSVDGFREDALKAIDNDVQW 446

Query: 569 VPP----------QEAPGYGADVLRLW-----VSSVDYTGDVMIGPQVLRQMSDIYRK 611
           +P           ++   +     R+W     +   +  G+ +I P  +  ++ I+ K
Sbjct: 447 IPSWGKARIHNMVRDRHDWCISRQRVWGVPIPIFYCEDCGEPLITPDTISHLAAIFEK 504



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 118/195 (60%), Gaps = 7/195 (3%)

Query: 569 VPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 627
           V PQ+    YGAD++RLWVSS DY GDV +  ++++ +S++YRK+R T+RY+LGN  D+ 
Sbjct: 619 VAPQDIIKDYGADIVRLWVSSTDYKGDVRVSKEIIKHVSEVYRKIRNTIRYILGNTSDFD 678

Query: 628 VGN-SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
                + + ++  +DQ+AL +L+ + K++ ++YE+Y F  +   I  F  VD+S+FY D+
Sbjct: 679 AETMKVPFAEMEELDQWALMRLQELKKDVEKAYENYDFHVVHHAIHDFCTVDMSSFYLDI 738

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 746
            KDRLY        RRS QT +   L  ++ ++APIL    E+V+Q     +  +   A 
Sbjct: 739 IKDRLYASKKDDKKRRSAQTAMYEILSDLIVMLAPILSFTMEEVYQ-----FMKKPAGAP 793

Query: 747 EFVFESKWPVLDEKW 761
           E V   +WP L E++
Sbjct: 794 ESVLMLEWPKLHEEY 808


>gi|418001914|ref|ZP_12642042.1| isoleucyl-tRNA synthetase [Lactobacillus casei UCD174]
 gi|410545359|gb|EKQ19659.1| isoleucyl-tRNA synthetase [Lactobacillus casei UCD174]
          Length = 928

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 197/469 (42%), Positives = 282/469 (60%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ KT+F MRA     EP   K WD+  V+ +    N+G+  F+LHDGPP+ANG
Sbjct: 2   KIKDTLNMGKTSFPMRAGLPKNEPIWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K+++ + 
Sbjct: 62  NIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVK--RKEMSMTD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA   +  Q   FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G
Sbjct: 120 YRELCRQFAMQEIDKQRTDFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS + LAEAE+EY +   S SIY  F++V       GLL+    D  L +WT
Sbjct: 180 LKPVYWSWSSESTLAEAEIEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN +  Y  V++            +KK               +VA++
Sbjct: 232 TTPWTIPANYGITVNPRFDYVQVQV-----------GDKK--------------YVVAAE 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    ++ KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHT
Sbjct: 267 LLDRVAEEIGWENPKIL-KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY   +KYGLP++S VD +G   E A  F G+    D N  + + L ++ +L+
Sbjct: 325 APGHGEDDYKVGVKYGLPVVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 384 KLDFFTHSYPHDWRTKKPVIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 119/194 (61%), Gaps = 5/194 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 744
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 745 AAEFVFESKWPVLD 758
            AE  F+ +  +LD
Sbjct: 783 EAE-QFDDESQLLD 795


>gi|418010739|ref|ZP_12650510.1| isoleucyl-tRNA synthetase [Lactobacillus casei Lc-10]
 gi|410553318|gb|EKQ27321.1| isoleucyl-tRNA synthetase [Lactobacillus casei Lc-10]
          Length = 928

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 197/469 (42%), Positives = 282/469 (60%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ KT+F MRA     EP   K WD+  V+ +    N+G+  F+LHDGPP+ANG
Sbjct: 2   KIKDTLNMGKTSFPMRAGLPKNEPIWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K+++ + 
Sbjct: 62  NIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVK--RKEMSMTD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA   +  Q   FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G
Sbjct: 120 YRELCRQFAMQEIDKQRTDFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS + LAEAE+EY +   S SIY  F++V       GLL+    D  L +WT
Sbjct: 180 LKPVYWSWSSESTLAEAEIEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN +  Y  V++            +KK               +VA++
Sbjct: 232 TTPWTIPANYGITVNPRFDYVQVQV-----------GDKK--------------YVVAAE 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    ++ KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHT
Sbjct: 267 LLDRVAEEIGWENPKIL-KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY   +KYGLP++S VD +G   E A  F G+    D N  + + L ++ +L+
Sbjct: 325 APGHGEDDYKVGVKYGLPVVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 384 KLDFFTHSYPHDWRTKKPVIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 119/194 (61%), Gaps = 5/194 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 744
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 745 AAEFVFESKWPVLD 758
            AE  F+ +  +LD
Sbjct: 783 EAE-QFDDESQLLD 795


>gi|417983354|ref|ZP_12623992.1| isoleucyl-tRNA synthetase [Lactobacillus casei 21/1]
 gi|417996143|ref|ZP_12636426.1| isoleucyl-tRNA synthetase [Lactobacillus casei M36]
 gi|418014872|ref|ZP_12654461.1| isoleucyl-tRNA synthetase [Lactobacillus casei Lpc-37]
 gi|410528300|gb|EKQ03153.1| isoleucyl-tRNA synthetase [Lactobacillus casei 21/1]
 gi|410535852|gb|EKQ10462.1| isoleucyl-tRNA synthetase [Lactobacillus casei M36]
 gi|410552694|gb|EKQ26709.1| isoleucyl-tRNA synthetase [Lactobacillus casei Lpc-37]
          Length = 928

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 197/469 (42%), Positives = 282/469 (60%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ KT+F MRA     EP   K WD+  V+ +    N+G+  F+LHDGPP+ANG
Sbjct: 2   KIKDTLNMGKTSFPMRAGLPKNEPIWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K+++ + 
Sbjct: 62  NIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVK--RKEMSMTD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA   +  Q   FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G
Sbjct: 120 YRELCRQFAMQEIDKQRTDFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS + LAEAE+EY +   S SIY  F++V       GLL+    D  L +WT
Sbjct: 180 LKPVYWSWSSESTLAEAEIEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN +  Y  V++            +KK               +VA++
Sbjct: 232 TTPWTIPANYGITVNPRFDYVQVQV-----------GDKK--------------YVVAAE 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    ++ KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHT
Sbjct: 267 LLDRVAEEIGWENPKIL-KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY   +KYGLP++S VD +G   E A  F G+    D N  + + L ++ +L+
Sbjct: 325 APGHGEDDYKVGVKYGLPVVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 384 KLDFFTHSYPHDWRTKKPVIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 119/194 (61%), Gaps = 5/194 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++Y++L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYNELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 744
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 745 AAEFVFESKWPVLD 758
            AE  F+ +  +LD
Sbjct: 783 EAE-QFDDESQLLD 795


>gi|191638284|ref|YP_001987450.1| isoleucyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|409997146|ref|YP_006751547.1| isoleucine--tRNA ligase [Lactobacillus casei W56]
 gi|254782413|sp|B3WDZ1.1|SYI_LACCB RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|190712586|emb|CAQ66592.1| Isoleucyl-tRNA synthetase (Isoleucine--tRNA ligase) (IleRS)
           [Lactobacillus casei BL23]
 gi|406358158|emb|CCK22428.1| Isoleucine--tRNA ligase [Lactobacillus casei W56]
          Length = 928

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 197/469 (42%), Positives = 282/469 (60%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ KT+F MRA     EP   K WD+  V+ +    N+G+  F+LHDGPP+ANG
Sbjct: 2   KIKDTLNMGKTSFPMRAGLPKNEPIWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K+++ + 
Sbjct: 62  NIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVK--RKEMSMTD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA   +  Q   FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G
Sbjct: 120 YRELCRQFAMQEIDKQRTDFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS + LAEAE+EY +   S SIY  F++V       GLL+    D  L +WT
Sbjct: 180 LKPVYWSWSSESTLAEAEIEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN +  Y  V++            +KK               +VA++
Sbjct: 232 TTPWTIPANYGITVNPRFDYVQVQV-----------GDKK--------------YVVAAE 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    ++ KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHT
Sbjct: 267 LLDRVAEEIGWENPKIL-KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY   +KYGLP++S VD +G   E A  F G+    D N  + + L ++ +L+
Sbjct: 325 APGHGEDDYKVGVKYGLPVVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 384 KLDFFTHSYPHDWRTKKPVIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 119/194 (61%), Gaps = 5/194 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 744
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLTVTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 745 AAEFVFESKWPVLD 758
            AE  F+ +  +LD
Sbjct: 783 EAE-QFDDESQLLD 795


>gi|418004993|ref|ZP_12644994.1| isoleucyl-tRNA synthetase [Lactobacillus casei UW1]
 gi|410548121|gb|EKQ22337.1| isoleucyl-tRNA synthetase [Lactobacillus casei UW1]
          Length = 928

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 197/469 (42%), Positives = 282/469 (60%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ KT+F MRA     EP   K WD+  V+ +    N+G+  F+LHDGPP+ANG
Sbjct: 2   KIKDTLNMGKTSFPMRAGLPKNEPIWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K+++ + 
Sbjct: 62  NIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVK--RKEMSMTD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA   +  Q   FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G
Sbjct: 120 YRELCRQFAMQEIDKQRTDFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS + LAEAE+EY +   S SIY  F++V       GLL+    D  L +WT
Sbjct: 180 LKPVYWSWSSESTLAEAEIEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN +  Y  V++            +KK               +VA++
Sbjct: 232 TTPWTIPANYGITVNPRFDYVQVQV-----------GDKK--------------YVVAAE 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    ++ KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHT
Sbjct: 267 LLDRVAEEIGWENPKIL-KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY   +KYGLP++S VD +G   E A  F G+    D N  + + L ++ +L+
Sbjct: 325 APGHGEDDYKVGVKYGLPVVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 384 KLDFFTHSYPHDWRTKKPVIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 116/194 (59%), Gaps = 5/194 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      +GA+++RLWV+ VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVAMVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++YD+L  +D+Y + +L  I+K ++ +Y+ Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDVYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 744
           KD +Y        RR  QTV+   LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFVALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 745 AAEFVFESKWPVLD 758
            AE  F+ +  +LD
Sbjct: 783 EAE-QFDDESQLLD 795


>gi|242780148|ref|XP_002479535.1| isoleucyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218719682|gb|EED19101.1| isoleucyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 1414

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 197/474 (41%), Positives = 282/474 (59%), Gaps = 30/474 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LP+++F  R +   +   + K  D+   + R  ++   E FVLHDGPPYANG L
Sbjct: 383 WTSTLKLPRSSFPARVSVADQAKYLRKCSDELYAWQR-ENRPANETFVLHDGPPYANGEL 441

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDED----AKKDLTP 221
           H+GH+LNKILKDIINR +L +  ++ YVPGWDCHGLPIELK LQ+  ++     +   + 
Sbjct: 442 HVGHSLNKILKDIINRTQLSRGKRIHYVPGWDCHGLPIELKALQAQQKNVIDFTQGPGSA 501

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           + +R  A K A+ TVK QM  F+ +G+ ADW   + TLD  +E  Q+ +F +M  +G IY
Sbjct: 502 ATIRKAARKLAEKTVKEQMRVFRGFGIMADWEGHWKTLDKGFEMKQLGIFREMVEKGLIY 561

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           R  KPV+WSPS+ TALAEAELEY + H+S +    F +   P          +  L   +
Sbjct: 562 RRFKPVYWSPSTGTALAEAELEYNDNHISTAALVRFPLAKLPEQIRDKPLVDVTSLSAVI 621

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PANAA+AV+  L Y +V  QS   G      ++     ++LK++ +V     
Sbjct: 622 WTTTPWTLPANAAIAVHESLNYLIV--QSSNHGQLLIAESRLGYFQDMLKEELQV----- 674

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
             LVP+++   G++L  K T         R + P D  +   +I  D++T +SG+GLVH 
Sbjct: 675 --LVPSIQ---GSELCQKTTY--------RPLFPRDGVEEQPIIAADFVTADSGSGLVHC 721

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDE 516
           APGHG +DY   L  G+   +PV DEG FT+EA        SG  VL +GN  V++Y++ 
Sbjct: 722 APGHGMDDYEVCLAQGIQAFAPVTDEGCFTDEAMPRDPSFLSGKSVLDEGNTLVLQYVES 781

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              L+ +  YEHKYPYDWR+K+P I RATEQWFA V   R++A+ ++  V +VP
Sbjct: 782 MSQLLCQHKYEHKYPYDWRSKRPIIIRATEQWFADVANIRESALASLEDVTFVP 835



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 91/157 (57%), Gaps = 1/157 (0%)

Query: 578  GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
            G D LRLWV+S DYT DV+IG QVL+ ++    K R T + LLG L D+    N   Y+D
Sbjct: 1052 GPDALRLWVASSDYTRDVVIGQQVLQTINTSLHKYRVTFKLLLGALGDFDPSVNLRQYED 1111

Query: 637  LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
            L  ID+ AL QL  +V   R +++S++F+K    + R+   + S FY +  KDRLYT   
Sbjct: 1112 LHKIDRLALMQLTRLVDTCRNAFDSFEFYKAVNALNRWANHEFSAFYMETLKDRLYTEAE 1171

Query: 697  TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQN 733
               +RR+ QT L      +  ++API P L E+ W++
Sbjct: 1172 DGASRRAAQTTLFHIYTYLQELLAPITPLLVEESWEH 1208


>gi|418007883|ref|ZP_12647755.1| isoleucyl-tRNA synthetase [Lactobacillus casei UW4]
 gi|410547968|gb|EKQ22189.1| isoleucyl-tRNA synthetase [Lactobacillus casei UW4]
          Length = 928

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 197/469 (42%), Positives = 282/469 (60%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ KT+F MRA     EP   K WD+  V+ +    N+G+  F+LHDGPP+ANG
Sbjct: 2   KIKDTLNMGKTSFPMRAGLPKNEPIWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K+++ + 
Sbjct: 62  NIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVK--RKEMSMTD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA   +  Q   FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G
Sbjct: 120 YRELCRQFAMQEIDKQRTDFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS + LAEAE+EY +   S SIY  F++V       GLL+    D  L +WT
Sbjct: 180 LKPVYWSWSSESTLAEAEIEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN +  Y  V++            +KK               +VA++
Sbjct: 232 TTPWTIPANYGITVNPRFDYVQVQV-----------GDKK--------------YVVAAE 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    ++ KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHT
Sbjct: 267 LLDRVAEEIGWENPKIL-KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY   +KYGLP++S VD +G   E A  F G+    D N  + + L ++ +L+
Sbjct: 325 APGHGEDDYKVGVKYGLPVVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 384 KLDFFTHSYPHDWRTKKPVIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 117/194 (60%), Gaps = 5/194 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++YD+L  +D+Y + +L  I+K ++ +Y+ Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTLAYDELGSVDRYMMVRLNQIIKQVKTAYDVYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 744
           KD +Y        RR  QTV+   LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFVALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 745 AAEFVFESKWPVLD 758
            AE  F+ +  +LD
Sbjct: 783 EAE-QFDDESQLLD 795


>gi|417989540|ref|ZP_12630044.1| isoleucyl-tRNA synthetase [Lactobacillus casei A2-362]
 gi|410537927|gb|EKQ12489.1| isoleucyl-tRNA synthetase [Lactobacillus casei A2-362]
          Length = 928

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 197/469 (42%), Positives = 282/469 (60%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ KT+F MRA     EP   K WD+  V+ +    N+G+  F+LHDGPP+ANG
Sbjct: 2   KIKDTLNMGKTSFPMRAGLPKNEPIWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K+++ + 
Sbjct: 62  NIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVK--RKEMSMTD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA   +  Q   FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G
Sbjct: 120 YRELCRQFAMKEIDKQRTDFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS + LAEAE+EY +   S SIY  F++V       GLL+    D  L +WT
Sbjct: 180 LKPVYWSWSSESTLAEAEIEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN +  Y  V++            +KK               +VA++
Sbjct: 232 TTPWTIPANYGITVNPRFDYVQVQV-----------GDKK--------------YVVAAE 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    ++ KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHT
Sbjct: 267 LLDRVAEEIGWENPKIL-KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY   +KYGLP++S VD +G   E A  F G+    D N  + + L ++ +L+
Sbjct: 325 APGHGEDDYKVGVKYGLPVVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 384 KLDFFTHSYPHDWRTKKPVIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 119/194 (61%), Gaps = 5/194 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 744
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 745 AAEFVFESKWPVLD 758
            AE  F+ +  +LD
Sbjct: 783 EAE-QFDDESQLLD 795


>gi|418069447|ref|ZP_12706725.1| isoleucyl-tRNA synthetase [Pediococcus acidilactici MA18/5M]
 gi|357536916|gb|EHJ20944.1| isoleucyl-tRNA synthetase [Pediococcus acidilactici MA18/5M]
          Length = 933

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 203/469 (43%), Positives = 282/469 (60%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V E +   +W +++V+ +    N+G+ +FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFKMRGNLPVNEKKREDVWFENKVYEQRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHA+NKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K ++ ++
Sbjct: 62  NIHMGHAMNKISKDIIVRYKSMSGFRSPYVPGWDTHGLPIEQQLTKEGHD--RKKMSTAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   V  Q   FKR GV A+W+NPYLTL P +EA +I  F +M   G IYRG
Sbjct: 120 FRKLCRDYALKQVDKQREDFKRLGVAAEWDNPYLTLQPSFEAEEIRTFAKMVELGLIYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +A+AEAE+EY +     + YA    VS      G+L++   D    VWT
Sbjct: 180 KKPVFWSWSSESAMAEAEVEYHDVTSPSAFYA--ERVS---DGKGVLDQ---DTYFVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + ++A   Y+VV+           PA           D +K   ++A+D
Sbjct: 232 TTPWTIPASEGITIDAGFDYSVVK-----------PAG----------DDRK--FVIATD 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
            +     ++G + V   KT+ G +LEN   +HP D+ +  VV+ GD++T +SGTGLVHTA
Sbjct: 269 RLSYATEQFGWQDVETIKTVRGQELENITALHPFDSDRKLVVMLGDFVTLDSGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D+    +YGL I  PVDD G  T EAG  F G+    D N   +  L    +L+
Sbjct: 329 PGFGEDDFRVGKEYGLDIFVPVDDRGYLTAEAGPDFEGV-FYEDANEIALNKLKATNALL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +  Y H YP+DWRTKKP IFRAT QWFASV+  R   +DA+  VK++P
Sbjct: 388 KQMDYTHSYPFDWRTKKPIIFRATPQWFASVDKIRDQILDALKDVKFLP 436



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 101/167 (60%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP       GA+++RLWV S+D + DV +      ++SD Y+K+R T+RYLL N  D+  
Sbjct: 607 VPADIIKKMGAEIIRLWVLSIDSSSDVRVSQDNFVKISDSYKKIRNTIRYLLANTADFDP 666

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N+++Y DL   D+Y L +   +VK IR+ Y+ Y F +I++ +  +II DLS FY D A
Sbjct: 667 QANTVAYADLQPEDRYMLVRFNELVKEIRQDYDQYNFIEIYKALMNYIITDLSAFYLDFA 726

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RRS QTV    L+ + +++ P+LPH  E++WQ L
Sbjct: 727 KDVVYIEPEDSLKRRSMQTVFYQILVGLTKLMTPVLPHTTEEIWQFL 773


>gi|169827027|ref|YP_001697185.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
 gi|168991515|gb|ACA39055.1| Isoleucyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
          Length = 922

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 198/470 (42%), Positives = 280/470 (59%), Gaps = 45/470 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR N    EP++ + W++  +     ++ +G   +VLHDGPPYANG+
Sbjct: 4   YKDTLLMPKTDFPMRGNLPANEPKMQEKWNEMDINKLQMERTEGRPEYVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           +H+GHALNK+LKD+I R++ +  Y V Y+PGWD HGLPIE    Q+L      +K+++ +
Sbjct: 64  IHIGHALNKVLKDMITRHRSMTGYHVNYIPGWDTHGLPIE----QALTNKGVKRKEMSVA 119

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
             R    ++A   +  Q   F+R G+  +W NPY+TL PE+EA QIEVFG+M+ +GYIY+
Sbjct: 120 AFRQLCEEYAYEQIDNQRNQFRRLGIRGNWENPYITLKPEFEARQIEVFGKMAEKGYIYK 179

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WSPSS +ALAEAE+EY +   S SIY  F +  A             D    +W
Sbjct: 180 GLKPVYWSPSSESALAEAEIEYKDIK-SPSIYVSFAIKDAKGVVPA-------DAKFVIW 231

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  +++N +  Y VV           A ANKK               I+A 
Sbjct: 232 TTTPWTLPANLGISLNPEFMYVVV-----------AVANKK--------------FIIAK 266

Query: 403 DLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           DL+ T+    +W    VI++ + G  L+     HP  +R   V++ G+++T ++GTG VH
Sbjct: 267 DLLETVATALEWEAYEVIQE-VKGEVLDRIVAQHPFYDRDSLVMV-GEHVTADAGTGCVH 324

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG++DY  S +YGL ILSP+D+ G +T+EA  F G+    D N  V + L E  +L
Sbjct: 325 TAPGHGEDDYHISKQYGLDILSPLDNSGCYTDEAPGFEGV-FYNDANKLVTEKLKEVDAL 383

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                  H YP+DWRTKKP I+RAT QWFASVE FR   ++A+    + P
Sbjct: 384 ESLGFISHSYPHDWRTKKPVIYRATPQWFASVEAFRGELLEAVKATAFTP 433



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 121/177 (68%), Gaps = 1/177 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           +P +    YGAD+LRLWV+SVDYT DV I   +L+Q+S++YRK+R T R+L GN+ D+  
Sbjct: 603 IPQKVMDQYGADILRLWVASVDYTADVRISMDMLKQVSEVYRKIRNTFRFLHGNIADFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + ++Y +L  +DQY   +L++++K +R +Y+ Y F  ++ ++  F+ V+LS+FY D+A
Sbjct: 663 TKDRVAYAELREMDQYVYMRLQDVLKTVRTAYDRYDFAAVYHVVNNFVAVELSSFYLDIA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGS 744
           KD +Y  G+ +  RR+ QTV+   L+++V+++ PI+PH  +++W  L    T+E+ S
Sbjct: 723 KDVVYIEGSDNKDRRAMQTVIYDTLMTLVKIMTPIIPHTTDEMWSYLHAQGTVEEAS 779


>gi|375089436|ref|ZP_09735762.1| isoleucine-tRNA ligase [Facklamia languida CCUG 37842]
 gi|374566834|gb|EHR38068.1| isoleucine-tRNA ligase [Facklamia languida CCUG 37842]
          Length = 927

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 199/470 (42%), Positives = 280/470 (59%), Gaps = 39/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANG 163
           + K T++L +T F MRAN   +E E+   W D  ++ ++ +KN D   +VLHDGPPYANG
Sbjct: 2   KLKETLNLGQTDFAMRANLPNKEVELQAEWQDQAMYDKIQEKNQDRTPWVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KD I RYK +   +  YVPGWD HGLPIE   LQ   +  +KD + ++
Sbjct: 62  NIHMGHALNKISKDFIVRYKSMAGMRSPYVPGWDTHGLPIE-TALQKNKKVNRKDYSTAE 120

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   V+ Q A+FKR GV  DW++PYLTLDPEYEA Q+ VFG M+ +GYIY+G
Sbjct: 121 FRNMCRDYALEQVEGQKATFKRLGVTGDWDHPYLTLDPEYEAQQLRVFGLMADKGYIYKG 180

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP+ WS SS ++LAEAE+EY +   S SIY  F++        G++ +   +    +WT
Sbjct: 181 AKPIFWSWSSESSLAEAEVEY-QDVTSPSIYVAFKVRDG----KGVVAD---NAEFIIWT 232

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  ++V    +Y  V +     GD                       I+A D
Sbjct: 233 TTPWTLPANLGISVKPDAEYVQVAV-----GDR--------------------HFILAQD 267

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ ++    G     ++ T  G   +     HP  +R+  +++ GD++T +SGTGLVHTA
Sbjct: 268 LLESVSQAIGWQDYQVEATFRGDQFDRLTASHPFYDRESLLML-GDHVTLDSGTGLVHTA 326

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG++DY   L+YGL ILSPVD  G +T++A    G+  L  G   +++ ++   SL+ 
Sbjct: 327 PGHGEDDYWIGLEYGLDILSPVDSRGHYTDQAPGLEGVFYL-KGEKQILEMIEANGSLLH 385

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQVKWVPP 571
              + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D +   VKW  P
Sbjct: 386 YSEFVHSYPHDWRTKKPVIYRATPQWFASIDRFRQELLDNVENSVKWHHP 435



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 102/158 (64%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GAD++RLWV+SVDY  DV +  ++L+Q+S+ YRK+R T+R++LG ++D+    + +  D 
Sbjct: 614 GADIIRLWVASVDYESDVRVSNEILKQVSESYRKIRNTIRFMLGLVNDFDPSQHQVDGDH 673

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L +IDQY          ++ + YESY++ ++++ +  F+  DLS FY DVAKD +Y    
Sbjct: 674 LALIDQYMHANFNQFKADMIQYYESYRYPELYKRLMNFVSTDLSAFYLDVAKDIVYIEAA 733

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RRS QTV+   L  ++ ++ PIL H AE+ W++L
Sbjct: 734 DSPVRRSMQTVIYQILHDLLILVTPILVHTAEEAWKSL 771


>gi|427439868|ref|ZP_18924432.1| isoleucine--tRNA ligase [Pediococcus lolii NGRI 0510Q]
 gi|425788000|dbj|GAC45220.1| isoleucine--tRNA ligase [Pediococcus lolii NGRI 0510Q]
          Length = 936

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 203/469 (43%), Positives = 282/469 (60%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V E +   +W +++V+ +    N+G+ +FVLHDGPPYANG
Sbjct: 5   RVKDTLNLGKTKFKMRGNLPVNEKKREDVWFENKVYEQRQKLNEGKPSFVLHDGPPYANG 64

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHA+NKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K ++ ++
Sbjct: 65  NIHMGHAMNKISKDIIVRYKSMSGFRSPYVPGWDTHGLPIEQQLTKEGHD--RKKMSTAE 122

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   V  Q   FKR GV A+W+NPYLTL P +EA +I  F +M   G IYRG
Sbjct: 123 FRKLCRDYALKQVDKQREDFKRLGVAAEWDNPYLTLQPSFEAEEIRTFAKMVELGLIYRG 182

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +A+AEAE+EY +     + YA    VS      G+L++   D    VWT
Sbjct: 183 KKPVFWSWSSESAMAEAEVEYHDVTSPSAFYA--ERVS---DGKGVLDQ---DTYFVVWT 234

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + ++A   Y+VV+           PA           D +K   ++A+D
Sbjct: 235 TTPWTIPASEGITIDAGFDYSVVK-----------PAG----------DDRK--FVIATD 271

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
            +     ++G + V   KT+ G +LEN   +HP D+ +  VV+ GD++T +SGTGLVHTA
Sbjct: 272 RLSYAAEQFGWQDVETIKTVRGQELENITALHPFDSDRKLVVMLGDFVTLDSGTGLVHTA 331

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D+    +YGL I  PVDD G  T EAG  F G+    D N   +  L    +L+
Sbjct: 332 PGFGEDDFRVGKEYGLDIFVPVDDRGYLTAEAGPDFEGV-FYEDANEIALNKLKATNALL 390

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +  Y H YP+DWRTKKP IFRAT QWFASV+  R   +DA+  VK++P
Sbjct: 391 KQMDYTHSYPFDWRTKKPIIFRATPQWFASVDKIRDQILDALKDVKFLP 439



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 101/167 (60%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP       GA+++RLWV S+D + DV +      ++SD Y+K+R T+RYLL N  D+  
Sbjct: 610 VPADIIKKMGAEIIRLWVLSIDSSSDVRVSQDNFVKISDSYKKIRNTIRYLLANTADFDP 669

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N+++Y DL   D+Y L +   +VK IR+ Y+ Y F +I++ +  +II DLS FY D A
Sbjct: 670 QANTVAYADLQPEDRYMLVRFNELVKEIRQDYDQYNFIEIYKALMNYIITDLSAFYLDFA 729

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RRS QTV    L+ + +++ P+LPH  E++WQ L
Sbjct: 730 KDVVYIEPEDSLKRRSMQTVFYQILVGLTKLMTPVLPHTTEEIWQFL 776


>gi|367018116|ref|XP_003658343.1| hypothetical protein MYCTH_2293982 [Myceliophthora thermophila ATCC
           42464]
 gi|347005610|gb|AEO53098.1| hypothetical protein MYCTH_2293982 [Myceliophthora thermophila ATCC
           42464]
          Length = 975

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 205/474 (43%), Positives = 282/474 (59%), Gaps = 41/474 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R     R+  I +  DD   + + A++   + FVLHDGPPYANG+L
Sbjct: 5   WASTLRLPKSTFPPRPLPQNRDQYIRRCADDLYKW-QAANRPADDEFVLHDGPPYANGSL 63

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H GHALNKILKD+I R K+ Q  +V YVPGWDCHGLPIELK   ++D  A K ++P  +R
Sbjct: 64  HAGHALNKILKDMILRVKIQQGRRVSYVPGWDCHGLPIELK---AVDVAAGKSMSPGAIR 120

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
             A K A  TV  QM +F+ YGV ADW+  + T+D  YE  Q+ +F +M+ +G +YR  K
Sbjct: 121 KAARKLAAKTVTEQMKAFRTYGVMADWDARWTTMDMAYEVRQLRLFQRMARRGLVYRRYK 180

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PV+WSPSS TALAEAELEY E HVS++ Y  F +V       G L+     L   +WTTT
Sbjct: 181 PVYWSPSSGTALAEAELEYNEAHVSKAAYVRFPVVGGHEGLPG-LDRLEGRLYAVIWTTT 239

Query: 346 PWTVPANAAVAVNAKLQYAVVEI--QSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           PWT+PAN A+AV+ +L Y +V     + L  ++      K  PG                
Sbjct: 240 PWTLPANRAIAVHDELTYHLVRAGQDAFLVAENCLERVAKVLPG---------------- 283

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCP--VVIGGDYITTESGTGLVHT 461
             P +E        +  T+ G +L   RYV+ +  R       + GD++T  SG+GLVH 
Sbjct: 284 -APEVE--------VLATVKGCELTRLRYVNVLRGRSAEPQPFMHGDFVTDGSGSGLVHC 334

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDE 516
           APGHG +DY+  L  G+P+ +PVD +G+FT+EA      +  G+ VL  G+ AV++ L +
Sbjct: 335 APGHGFDDYLACLPRGIPVSAPVDGDGRFTDEAFPDQPDRLRGISVLDGGSSAVLEILGD 394

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +  + +  Y HKYPYDWRTK+P I RAT QWFA V   + AA+ AIG+V++VP
Sbjct: 395 DVLDVHD--YRHKYPYDWRTKQPIIIRATAQWFADVGTIKDAALAAIGKVRFVP 446



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 13/158 (8%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
           G D LRLWV+S DYT D+++G  VL+ +     K R T++ L G++H      S     L
Sbjct: 663 GPDALRLWVASSDYTRDIVLGEPVLKTIHQALLKYRTTIKMLTGSMH-----RSARTAPL 717

Query: 638 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
             +D+ AL QL +++  +   Y++++F K F  + R++  DLS FY +  KDRLY     
Sbjct: 718 TAVDEIALLQLGDVMDEVGRHYDAHEFNKAFGALNRWLANDLSAFYLEALKDRLYCADGG 777

Query: 698 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
                    VL    +  +R++AP+ P L E+ W++ P
Sbjct: 778 G--------VLEPIFVGFLRMLAPVAPLLVEEAWEHRP 807


>gi|257791308|ref|YP_003181914.1| isoleucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257475205|gb|ACV55525.1| isoleucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 948

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 198/479 (41%), Positives = 281/479 (58%), Gaps = 45/479 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T++LPKT F MRAN    EP+    W++  ++ +V +KN DG+ F+LHDGPPYANG 
Sbjct: 5   YKETMNLPKTDFAMRANLPESEPKRLAKWEEEHIYEQVLEKNKDGKPFILHDGPPYANGP 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA NKILKD +N+    + +   YVPGWDCHG PIE  V ++L  D    +    L
Sbjct: 65  IHIGHAFNKILKDFVNKSHAQRGFFTPYVPGWDCHGQPIEHMVEKTLGPDKMAKIDQPTL 124

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A+  V  Q   FKR GV ADW +PYLT  P YEA  +EVF +M L G +YRG+
Sbjct: 125 RRLCREWAEKYVDVQREGFKRLGVNADWEHPYLTFTPNYEAGNVEVFKRMYLDGSVYRGR 184

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPP--STSGLLNEFLPDLGLAVW 342
           KP+HW     TALAEAE+EY +   S SI+  F+M   P    T+G       D  + +W
Sbjct: 185 KPIHWCKRCHTALAEAEIEYSD-ETSPSIFVKFKMDIMPGMFETAGAAG----DAYVLIW 239

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN AV++     Y +V+         A  +N                +I+A 
Sbjct: 240 TTTPWTLPANTAVSLAPDADYVMVQ---------ADGSN----------------MIMAR 274

Query: 403 DLVPTLE--AKWGTKLVIKK------TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
           +LV  +   A W +  +++        L G +     Y  PV       +I GD++T +S
Sbjct: 275 ELVEQVAEIAGWESYDLVRGEDGEPVALKGREFTGLTYTCPVRQDLKGTIIYGDHVTLDS 334

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           GTG VHTAPGHGQ+DY+ +L++ +P+L PVDD G  T+EAG F+GLDV  + N  ++++L
Sbjct: 335 GTGAVHTAPGHGQDDYLVALEFDVPLLMPVDDNGVLTDEAGPFAGLDV-DEANPVIIEWL 393

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 570
            E+ +L+ ++   H YP+ WR  +P IFRAT+QWF S++    R+ A+ AI   V+W+P
Sbjct: 394 RERGTLVAQKEILHSYPHCWRCHEPVIFRATDQWFVSMDKNSLRENALKAIENDVEWIP 452



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 111/162 (68%), Gaps = 2/162 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS-YD 635
           GADVLRLWV+SVDY+ DV I  ++L++ S+ YR++R T R+LLG+L D+    +++S ++
Sbjct: 635 GADVLRLWVASVDYSQDVSISDEILQRTSEAYRRIRNTFRFLLGSLDDFDDQKDAVSDWN 694

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
            L  +DQ+A+ + ++++ ++  +Y++Y+F  +++ +  +I+ DLS  Y D  KDRLY+  
Sbjct: 695 ALEPLDQWAMVRTKHLLDDVSAAYDAYKFHYVYRAVYDYIVNDLSAVYMDATKDRLYSEA 754

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
             S  RR+ QTVL   L  +VRV+AP+L    ++VW++ P A
Sbjct: 755 PDSPRRRAVQTVLMNILEVLVRVLAPVLSFTTDEVWEHYPQA 796


>gi|365841037|ref|ZP_09382193.1| isoleucine--tRNA ligase [Anaeroglobus geminatus F0357]
 gi|364559216|gb|EHM37206.1| isoleucine--tRNA ligase [Anaeroglobus geminatus F0357]
          Length = 931

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 199/472 (42%), Positives = 279/472 (59%), Gaps = 38/472 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFL-RVADKNDGENFVLHDGPPYANGN 164
           Y  T+ LP+T F MR N   REP+    W +H ++  R+  +N  + F+LHDGPPYANG 
Sbjct: 3   YGKTLHLPETEFPMRGNLPQREPDFLTFWQEHDIYHKRLEKRNGAQKFILHDGPPYANGK 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHALNK+LKDII +YK  Q +  +YVPGWD HGLPIE  V++    D + D +P  L
Sbjct: 63  LHIGHALNKVLKDIILKYKTQQGFYTKYVPGWDTHGLPIEHAVIKDTGLD-RHDTSPLDL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +   +A A V  Q A F R+GV  DW++PYLTL    E AQI VFG+M+  GYIY+G 
Sbjct: 122 RKRCHDYALARVTEQKADFIRFGVLGDWDHPYLTLQKHIEVAQIGVFGKMAKNGYIYKGM 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           K V+W P   TALAEAE+EY E   S SIY  F+            +  L      +WTT
Sbjct: 182 KSVYWCPHCETALAEAEIEYKEIK-SHSIYVRFKAADLGKHAPAGFD--LDHAYALIWTT 238

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+  N  ++Y  V++     GD+A                    +++A +L
Sbjct: 239 TPWTIPSNMAICANEAIEYVWVKV-----GDTA--------------------VLMAKEL 273

Query: 405 V-PTLE-AKWGTKLVIKKTLAGSDLENCRYVHPV-DNRQCPVVIGGDYITTESGTGLVHT 461
           V PT+E AK     V+   + G  +E   ++HP    R+ PV++ GD++T E+GTGLVHT
Sbjct: 274 VGPTMEAAKVAAYEVLPGVMTGKQIEGLVFLHPFYPERRVPVIL-GDHVTLEAGTGLVHT 332

Query: 462 APGHGQEDYVTSLKY---GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQM 518
           AP HG+ED+    KY   GL  +  V  +G++T+    + G  VL D +V ++K L    
Sbjct: 333 APDHGEEDFEVCKKYAAWGLGPIGTVGPDGRYTKAVPGYEGKFVL-DVDVEMIKALAACG 391

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +L  +    H+Y + WR K P I+RATEQWF+SV+G+RQ A++AI +V+W+P
Sbjct: 392 ALFAKGSLRHQYAHCWRCKNPVIYRATEQWFSSVDGYRQKALEAIDKVQWIP 443



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 88/207 (42%), Positives = 132/207 (63%), Gaps = 9/207 (4%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    ++G    V PQE    YGADV+RLWVSS DY GDV + P++L+Q+SD+Y
Sbjct: 598 TVDGEGRKMSKSVGNT--VAPQEIIDQYGADVMRLWVSSADYQGDVRLSPKILKQLSDVY 655

Query: 610 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           RK+R T R+LLGN++D+    ++++Y D+  ID++AL +LE + + + E+YE+YQF  ++
Sbjct: 656 RKIRNTFRFLLGNINDFNPETDAVAYADMTEIDKWALLRLEQVFETVTEAYENYQFHVMY 715

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
             I  F  VDLS+ Y DV KDR+YT    S  RRS QT +   L ++V++ AP+L   AE
Sbjct: 716 HTIHNFCTVDLSSIYLDVTKDRVYTEKAGSLARRSAQTAMYIILDTLVKITAPVLSFTAE 775

Query: 729 DVWQNLPFAYTLEDGSAAEFVFESKWP 755
           +VWQ +P     +     E V  + WP
Sbjct: 776 EVWQFMP-----DVAGKEESVLLTDWP 797


>gi|270291450|ref|ZP_06197672.1| isoleucyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280296|gb|EFA26132.1| isoleucyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 933

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 203/469 (43%), Positives = 282/469 (60%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V E +   +W +++V+ +    N+G+ +FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFKMRGNLPVNEKKREDVWFENKVYEQRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHA+NKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K ++ ++
Sbjct: 62  NIHMGHAMNKISKDIIVRYKSMSGFRSPYVPGWDTHGLPIEQQLTKEGHD--RKKMSTAE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   V  Q   FKR GV A+W+NPYLTL P +EA +I  F +M   G IYRG
Sbjct: 120 FRKLCRDYALKQVDKQREDFKRLGVAAEWDNPYLTLQPSFEAEEIRTFAKMVELGLIYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +A+AEAE+EY +     + YA    VS      G+L++   D    VWT
Sbjct: 180 KKPVFWSWSSESAMAEAEVEYHDVTSPSAFYA--ERVS---DGKGVLDQ---DTYFVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + ++A   Y+VV+           PA           D +K   ++A+D
Sbjct: 232 TTPWTIPASEGITIDAGFDYSVVK-----------PAG----------DDRK--FVIATD 268

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
            +     ++G + V   KT+ G +LEN   +HP D+ +  VV+ GD++T +SGTGLVHTA
Sbjct: 269 RLSYATEQFGWQDVETIKTVRGQELENITALHPFDSDRKLVVMLGDFVTLDSGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D+    +YGL I  PVDD G  T EAG  F G+    D N   +  L    +L+
Sbjct: 329 PGFGEDDFRVGKEYGLDIFVPVDDRGYLTAEAGPDFEGV-FYEDANEIALNKLKATNALL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +  Y H YP+DWRTKKP IFRAT QWFASV+  R   +DA+  VK++P
Sbjct: 388 KQMDYTHSYPFDWRTKKPIIFRATPQWFASVDKIRDQILDALKDVKFLP 436



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 101/167 (60%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP       GA+++RLWV S+D + DV +      ++SD Y+K+R T+RYLL N  D+  
Sbjct: 607 VPADIIKKMGAEIIRLWVLSIDSSSDVRVSQDNFVKISDSYKKIRNTIRYLLANTADFDP 666

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N+++Y DL   D+Y L +   +VK IR+ Y+ Y F +I++ +  +II DLS FY D A
Sbjct: 667 QANTVAYADLQPEDRYMLVRFNELVKEIRQDYDQYNFIEIYKALMNYIITDLSAFYLDFA 726

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RRS QTV    L+ + +++ P+LPH  E++WQ L
Sbjct: 727 KDVVYIEPEDSLKRRSMQTVFYQILVGLTKLMTPVLPHTTEEIWQFL 773


>gi|331701068|ref|YP_004398027.1| isoleucyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128411|gb|AEB72964.1| Isoleucyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 934

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 197/469 (42%), Positives = 282/469 (60%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E +  K W+D+ V+ +    N+G+  FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFKMRGNLPVKEVDRQKAWEDNDVYQQRQKLNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKI KDII RYK +  Y+  YVPGWD HGLPIE K+ Q+  +  +K ++ + 
Sbjct: 62  DIHMGHALNKISKDIIVRYKSMTGYRAPYVPGWDTHGLPIEQKLTQAGYD--RKKMSTND 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   V  Q   FKR GV  DW++PYLTL PE+EA ++ VFG  + +G IY+G
Sbjct: 120 FRKLCRDYALKQVDRQKEEFKRLGVSGDWDDPYLTLKPEFEAQEVRVFGAFAKRGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY +     + Y    +        G+L++   D  + VWT
Sbjct: 180 KKPVYWSWSSESALAEAEVEYHDITSPTAFYGEHVV-----DGKGVLDD---DTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + V+A   Y+VV+     EG++                      ++A++
Sbjct: 232 TTPWTIPASEGITVDAGFDYSVVQP----EGETRK-------------------FVIATE 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV  +    G T +   KT+ G DLE     HP D+ +  + + GD++  E GTGLVHTA
Sbjct: 269 LVDKVADLIGWTNVKTIKTVKGQDLEGILAEHPFDHSRKLLTMLGDFVDLEEGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++D+    +YGL I +PVDD+G  T+E+G+ F+G+    D N   +  L +   L+
Sbjct: 329 PGYGEDDFNIGRQYGLDIFAPVDDKGYLTKESGEDFAGV-FYDDANKIALDKLKDAKLLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              P +H YP+DWRTKKP IFRAT QWFASV+  +   + ++  V++ P
Sbjct: 388 HYMPLKHSYPFDWRTKKPIIFRATPQWFASVDKIKDEILKSLDDVQFFP 436



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 91/155 (58%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GA+++RLWV+SVD + DV +  +   ++SD Y+K+R T+R+LL N  D+    N++++DD
Sbjct: 616 GAEIVRLWVTSVDTSADVRVSTENFVKVSDSYKKIRNTMRFLLANTSDFDPKENTVAFDD 675

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L   DQY L      + + R   E Y F    + +  FI  DLS FY D+AKD +Y    
Sbjct: 676 LESQDQYMLVLFNKFLADTRSYMERYDFLDWNKKVVGFITNDLSAFYLDIAKDIVYIDKQ 735

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
               RRS QTV+    + + +++ P+LPH  E++W
Sbjct: 736 DGHKRRSMQTVMYEIAVGLTKLMTPVLPHTTEEIW 770


>gi|406837715|ref|ZP_11097309.1| isoleucyl-tRNA ligase [Lactobacillus vini DSM 20605]
          Length = 931

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 284/469 (60%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  VRE E    W++++V+ R    N+G+  FVLHDGPPYANG
Sbjct: 2   RIKDTLNLGKTKFPMRGNLPVREVERQNEWEENKVYERRQKLNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KD I R K +  ++  YVPGWD HGLPIE ++ ++  +  +K L+ + 
Sbjct: 62  NIHMGHALNKISKDFIVRSKSMMGFRAPYVPGWDTHGLPIEQQLKKAGVD--RKSLSIAD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A   V  Q   FKR GV  +W+NPYLTLDP++EA +I VFG+M+ +G IY+G
Sbjct: 120 FREKCREYALEQVDKQRRDFKRLGVAGEWDNPYLTLDPKFEAQEIRVFGKMAERGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +ALAEAE+EY +     + Y   ++V       G+L+E   D  + VWT
Sbjct: 180 KKPVFWSWSSESALAEAEVEYHDVTSPSAFYGE-KVVDG----KGVLDE---DTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + V+    Y+VV+           PA           D++K   ++AS+
Sbjct: 232 TTPWTIPASEGITVDKDFDYSVVQ-----------PAG----------DERK--FVLASE 268

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV      +G K   + KTL G DLE     HP    +  + + GD++T ++GTGLVHTA
Sbjct: 269 LVEKNAELFGWKDYQVVKTLKGQDLEYILTQHPFYPDKTLLTMLGDFVTLDAGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D+    +YGL I  PVDD+G  T + GK F+G+    D N   +  L E   L+
Sbjct: 329 PGFGEDDFNVGKQYGLEIYVPVDDKGYLTPDTGKDFAGV-FYDDANEISLNKLKEAGLLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              P +H YP+DWRTKKP IFRAT QWFASV+  R   + AI +VK+ P
Sbjct: 388 KYLPIKHSYPFDWRTKKPIIFRATPQWFASVDKIRDEILAAIDEVKFFP 436



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 99/167 (59%), Gaps = 6/167 (3%)

Query: 574 APG-----YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           APG     +GA+++RLWV SVD + DV +      Q+S+ YRK+R T+R++L N  D+  
Sbjct: 607 APGKVIKQFGAEIIRLWVLSVDSSADVRVSMDSFSQISEAYRKIRNTIRFMLANTTDFDP 666

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N++++D L  +DQY   ++    K + + Y  Y F  I++ +  F+  DLS FY D+A
Sbjct: 667 KQNAVAFDQLESLDQYMEIKVNQFTKEVLDCYAKYDFMDIYKKLLNFVTTDLSAFYLDIA 726

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RRS QTVL    + + +++ P+LPH  E++WQ L
Sbjct: 727 KDVVYIESKDSHKRRSMQTVLYDITVRLAKLLTPVLPHTTEEIWQYL 773


>gi|304385164|ref|ZP_07367510.1| isoleucine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304329358|gb|EFL96578.1| isoleucine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 936

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 203/469 (43%), Positives = 282/469 (60%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V E +   +W +++V+ +    N+G+ +FVLHDGPPYANG
Sbjct: 5   RVKDTLNLGKTKFKMRGNLPVNEKKREDVWFENKVYEQRQKLNEGKPSFVLHDGPPYANG 64

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHA+NKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K ++ ++
Sbjct: 65  NIHMGHAMNKISKDIIVRYKSMSGFRSPYVPGWDTHGLPIEQQLTKEGHD--RKKMSTAE 122

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   V  Q   FKR GV A+W+NPYLTL P +EA +I  F +M   G IYRG
Sbjct: 123 FRKLCRDYALKQVDKQREDFKRLGVAAEWDNPYLTLQPSFEAEEIRTFAKMVELGLIYRG 182

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +A+AEAE+EY +     + YA    VS      G+L++   D    VWT
Sbjct: 183 KKPVFWSWSSESAMAEAEVEYHDVTSPSAFYA--ERVS---DGKGVLDQ---DTYFVVWT 234

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + ++A   Y+VV+           PA           D +K   ++A+D
Sbjct: 235 TTPWTIPASEGITIDAGFDYSVVK-----------PAG----------DDRK--FVIATD 271

Query: 404 LVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
            +     ++G + V   KT+ G +LEN   +HP D+ +  VV+ GD++T +SGTGLVHTA
Sbjct: 272 RLSYATEQFGWQDVETIKTVRGQELENITALHPFDSDRKLVVMLGDFVTLDSGTGLVHTA 331

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D+    +YGL I  PVDD G  T EAG  F G+    D N   +  L    +L+
Sbjct: 332 PGFGEDDFGVGKEYGLDIFVPVDDRGYLTAEAGPDFEGV-FYEDANEIALNKLKATNALL 390

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +  Y H YP+DWRTKKP IFRAT QWFASV+  R   +DA+  VK++P
Sbjct: 391 KQMDYTHSYPFDWRTKKPIIFRATPQWFASVDKIRDQILDALKDVKFLP 439



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 101/167 (60%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP       GA+++RLWV S+D + DV +      ++SD Y+K+R T+RYLL N  D+  
Sbjct: 610 VPADIIKKMGAEIIRLWVLSIDSSSDVRVSQDNFVKISDSYKKIRNTIRYLLANTADFDP 669

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N+++Y DL   D+Y L +   +VK IR+ Y+ Y F +I++ +  +II DLS FY D A
Sbjct: 670 QANTVAYADLQPEDRYMLVRFNELVKEIRQDYDQYNFIEIYKALMNYIITDLSAFYLDFA 729

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RRS QTV    L+ + +++ P+LPH  E++WQ L
Sbjct: 730 KDVVYIEPEDSLKRRSMQTVFYQILVGLTKLMTPVLPHTTEEIWQFL 776


>gi|406026565|ref|YP_006725397.1| isoleucyl-tRNA synthetase [Lactobacillus buchneri CD034]
 gi|405125054|gb|AFR99814.1| Isoleucyl-tRNA synthetase [Lactobacillus buchneri CD034]
          Length = 934

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 197/469 (42%), Positives = 282/469 (60%), Gaps = 37/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E +  K W+D+ V+ +    N+G+  FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFKMRGNLPVKEVDRQKAWEDNDVYQQRQKLNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKI KDII RYK +  Y+  YVPGWD HGLPIE K+ Q+  +  +K ++ + 
Sbjct: 62  DIHMGHALNKISKDIIVRYKSMTGYRAPYVPGWDTHGLPIEQKLTQAGYD--RKKMSTND 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   V  Q   FKR GV  DW++PYLTL PE+EA ++ VFG  + +G IY+G
Sbjct: 120 FRKLCRDYALKQVDRQKEEFKRLGVSGDWDDPYLTLKPEFEAQEVRVFGAFAKRGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY +     + Y    +        G+L++   D  + VWT
Sbjct: 180 KKPVYWSWSSESALAEAEVEYHDITSPTAFYGEHVV-----DGKGVLDD---DTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + V+A   Y+VV+     EG++                      ++A++
Sbjct: 232 TTPWTIPASEGITVDAGFDYSVVQP----EGETRK-------------------FVIATE 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV  +    G T +   KT+ G DLE     HP D+ +  + + GD++  E GTGLVHTA
Sbjct: 269 LVDKVADLIGWTNVKTIKTVKGQDLEGILAEHPFDHSRKLLTMLGDFVDLEEGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++D+    +YGL I +PVDD+G  T+E+G+ F+G+    D N   +  L +   L+
Sbjct: 329 PGYGEDDFNIGRQYGLDIFAPVDDKGYLTKESGEDFAGV-FYDDANKIALDKLKDAKLLL 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              P +H YP+DWRTKKP IFRAT QWFASV+  +   + ++  V++ P
Sbjct: 388 HYMPLKHSYPFDWRTKKPIIFRATPQWFASVDKIKDEILKSLDDVQFFP 436



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 91/155 (58%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GA+++RLWV+SVD + DV +  +   ++SD Y+K+R T+R+LL N  D+    N++++DD
Sbjct: 616 GAEIVRLWVTSVDTSADVRVSTENFVKVSDSYKKIRNTMRFLLANTSDFDPKENTVAFDD 675

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L   DQY L      + + R   E Y F    + +  FI  DLS FY D+AKD +Y    
Sbjct: 676 LESQDQYMLVLFNKFLADTRSYMERYDFLDWNKKVVGFITNDLSAFYLDIAKDIVYIDKQ 735

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
               RRS QTV+    + + +++ P+LPH  E++W
Sbjct: 736 DGHKRRSMQTVMYEIAVGLTKLMTPVLPHTTEEIW 770


>gi|50548447|ref|XP_501693.1| YALI0C10780p [Yarrowia lipolytica]
 gi|49647560|emb|CAG82002.1| YALI0C10780p [Yarrowia lipolytica CLIB122]
          Length = 972

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 191/476 (40%), Positives = 280/476 (58%), Gaps = 35/476 (7%)

Query: 103 EGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYAN 162
           E  Y  T+ LPKT F  R      E  + +  D  Q++   A     E FVLHDGPPYAN
Sbjct: 35  EKSYSATLLLPKTDFPPRRKPAALEELLTQSRD--QLYTWNAANKSREPFVLHDGPPYAN 92

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKD---- 218
           G LH+GH LNK+ KDIINRY+L+   +V YVPGWDCHGLPIELK L++L +  K D    
Sbjct: 93  GALHVGHVLNKVTKDIINRYQLISGKRVDYVPGWDCHGLPIELKALETLSKKLKTDAATV 152

Query: 219 LTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQG 278
           L    +R  A K A  T+++Q   F+  G+  DW NPYLT+  E+E AQ+ +F ++  +G
Sbjct: 153 LPAHTIREMARKHATDTIESQRNEFRGLGIMGDWENPYLTMSHEFEVAQLRIFQELLTRG 212

Query: 279 YIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG 338
            +YR  KPV+W   +RTALAEAELEY   H S++++  F +     + + +  ++ PDL 
Sbjct: 213 RMYRKIKPVYWGWETRTALAEAELEYNPKHKSQAVFVAFPLNEKSDTLAEVTKDY-PDLA 271

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           + +WTTTPWT+ AN A +V+  ++YAVV               +++  G          +
Sbjct: 272 IVIWTTTPWTLVANRACSVHKDVEYAVV---------------RQTCSGR--------HL 308

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +V   LV +L  K G   ++   + GS+L +  Y +P+ +   P +   DY++ ESGTG+
Sbjct: 309 LVGKKLVESLSEKLGELEIVGDGIFGSELTSSTYTNPLTDTHHP-IYHADYVSDESGTGM 367

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFT----EEAGKFSGLDVLGDGNVAVVKYL 514
           VH+APGHGQ+DY+  + +G+   SPV+  G +T    E+    +G  VLG+G  AV+   
Sbjct: 368 VHSAPGHGQDDYLFCMGHGIAPYSPVNASGHYTSDLPEKLADLAGKHVLGEGQKAVIALA 427

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +   L+ +E Y H YPYDWR+KKP I R+T QWFA+V+  ++  + A+ QV++VP
Sbjct: 428 TKNKMLLQKESYTHSYPYDWRSKKPIIIRSTPQWFANVDDIKEDTIKALDQVEFVP 483



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 96/156 (61%), Gaps = 1/156 (0%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISY 634
           P  G D +RLWV+  D+T DV IGP +L+ + +  RKLR T R+LLGNL  +     ++Y
Sbjct: 666 PALGIDGIRLWVAQSDFTNDVAIGPVILKHVGEFTRKLRTTFRFLLGNL-GYGKQVDLNY 724

Query: 635 DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTG 694
            DL ++D+ AL  L  +    ++ Y  +QF +++Q I   +   LS+FYFD+AK+RLY  
Sbjct: 725 ADLHLVDRIALQDLHQLEVTCKDYYSKHQFNRVYQQISHHMNTCLSSFYFDIAKERLYVN 784

Query: 695 GTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
             +S +R+S   VLS  L + + +++P+ P L ++V
Sbjct: 785 DVSSQSRQSVAYVLSEVLKTYLAILSPLTPLLTQEV 820


>gi|373466932|ref|ZP_09558241.1| isoleucine--tRNA ligase [Haemophilus sp. oral taxon 851 str. F0397]
 gi|371759696|gb|EHO48408.1| isoleucine--tRNA ligase [Haemophilus sp. oral taxon 851 str. F0397]
          Length = 941

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 198/471 (42%), Positives = 285/471 (60%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T+F MR +   REP++ K W D  ++ ++ + + G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETSFPMRGDLAKREPDMLKNWYDKNLYQKIREASKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + +T ++ 
Sbjct: 65  IHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKITAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIANGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL--LNEFLPDLGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F  VSA         + +    L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPTVSAVEIEEKFNAVGKGHGKLSAVIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA+L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNAELEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + V I  ++ G  LE  R+ HP  N   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGVEQVEILGSVKGQALELVRFNHPFYNFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++   KY LP+   V ++GKF      F+G  V  + N  VV+ L E  +L+
Sbjct: 337 APDHGLDDFIVGQKYNLPMAGLVSNDGKFISTTEFFAGKGVF-EANPLVVEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 125/202 (61%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +      +  +++  +D++A+    +  K I++SY++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQKEIKDSYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++WQ+LP     E G  AEFVF
Sbjct: 774 EIWQHLP---QTESGR-AEFVF 791


>gi|417986649|ref|ZP_12627216.1| isoleucyl-tRNA synthetase [Lactobacillus casei 32G]
 gi|410525235|gb|EKQ00139.1| isoleucyl-tRNA synthetase [Lactobacillus casei 32G]
          Length = 928

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 197/469 (42%), Positives = 281/469 (59%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ KT+F MRA     EP   K WD+  V+ +    N+G+  F+LHDGPP+ANG
Sbjct: 2   KIKDTLNMGKTSFPMRAGLPKNEPIWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K+++ + 
Sbjct: 62  NIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVK--RKEMSMTD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA   +  Q   FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G
Sbjct: 120 YRELCRQFAMQEIDKQRTDFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS + LAEAE+EY +   S SIY  F++V       GLL+    D  L +WT
Sbjct: 180 LKPVYWSWSSESTLAEAEIEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN +  Y  V++            +KK               +VA++
Sbjct: 232 TTPWTIPANYGITVNPRFDYVQVQV-----------GDKK--------------YVVAAE 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    ++ KT  G D++     HP+ +R   +V+  D++T ++GTGLVHT
Sbjct: 267 LLDRVAEEIGWENPKIL-KTFKGMDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY   +KYGLP++S VD +G   E A  F G+    D N  + + L ++ +L+
Sbjct: 325 APGHGEDDYKVGVKYGLPVVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 384 KLDFFTHSYPHDWRTKKPVIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 118/194 (60%), Gaps = 5/194 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++YD+L  +D+Y + +L  I+K ++ +Y+ Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDVYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 744
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 745 AAEFVFESKWPVLD 758
            AE  F+ +  +LD
Sbjct: 783 EAE-QFDDESQLLD 795


>gi|167522938|ref|XP_001745806.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775607|gb|EDQ89230.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1051

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 211/536 (39%), Positives = 298/536 (55%), Gaps = 69/536 (12%)

Query: 52  SRGSSSLKFLSFLNVTCYSICSGDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVD 111
           +R  S+ + L+ L V   S+    E C              + AA  + K   +Y HT+ 
Sbjct: 12  TRPRSAPRLLARLGVVRRSLRYSREACHQ------------QNAARPQHK---KYDHTLR 56

Query: 112 LPKTTFGMRANALVREPEIHK-----LWDDHQVFLRVADKN--DG-ENFVLHDGPPYANG 163
           LP+T F MR NA   EP I +     L+   Q+  R AD +  DG   F+LHDGPP+ANG
Sbjct: 57  LPRTAFPMRLNAAQVEPRIQQECLTGLYP--QLRDRPADSSSEDGPAAFILHDGPPFANG 114

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL---------DED 214
           +LHMGH LNK+LKD+I RY+ LQ   V + PGWDCHGLPIE+K + ++         D+D
Sbjct: 115 DLHMGHVLNKVLKDVICRYQALQGRPVHFRPGWDCHGLPIEVKAVSAVRSTDASEGADDD 174

Query: 215 AKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQM 274
           A        +R  AA FA   +  Q   FKR G+ ADW  PY+T+ PEYEAAQ+++F  M
Sbjct: 175 ANATAQLLDVRQTAATFAAGAIDRQRTLFKRLGILADWERPYITMTPEYEAAQLKLFHHM 234

Query: 275 SLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL 334
             QG +YR   PV WSP S+TALAEAE+EY + H S S Y  F +++ P  T        
Sbjct: 235 LDQGLVYRRFCPVQWSPQSQTALAEAEVEYYD-HTSTSAYVRFPLINRPTGTD------- 286

Query: 335 PDLGLA--VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKD 392
           PD  +A  +WTTTPWT+ AN A+A N  L+Y +V                  RP      
Sbjct: 287 PDTPIAALIWTTTPWTLLANQALAFNPGLRYVLV------------------RP----TP 324

Query: 393 QKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITT 452
           +    +++A D +  L       L + + +  + L + +  HP+ +R  P  I GD++T+
Sbjct: 325 EAHELLLIAYDRLEALRQTLQQPLDVIQDVPATALGDLQAQHPLHSRTIP-FIAGDHVTS 383

Query: 453 ESGTGLVHTAPGHGQEDYVTSLKYGLPI-LSPVDDEGKFTEEAG-KFSGLDVLGDGNVAV 510
           ++GTG+VHTAP HG ED+    + G+ +  + VD  G++ + AG + +GL+VLG+GN  V
Sbjct: 384 DAGTGVVHTAPAHGVEDFRACQRVGIDVEFNLVDGRGRYRDAAGPQLAGLEVLGEGNTTV 443

Query: 511 VKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQV 566
           +  L+   SL+  E Y+H+YPYDWRTK P +FRAT QWFA +    + A DA+  V
Sbjct: 444 LGQLEAAGSLVHREAYQHRYPYDWRTKTPLLFRATRQWFADLRHIGEHARDALADV 499



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 97/163 (59%), Gaps = 3/163 (1%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNL--HDWRVG 629
           ++ P YGAD LRLW +SVDYT DV IGP  LR   +  RK+R  LR++ GNL   +  + 
Sbjct: 648 KQEPAYGADTLRLWAASVDYTNDVSIGPNTLRITHENLRKIRNALRFMHGNLGAAEPALA 707

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
           +  +  +LP ++ Y +  L +   +++ +Y+ + F ++ QI   FI  +LS FYF++ KD
Sbjct: 708 SGSAIVELPSLEAYLMHLLADYEGSVKAAYDQHNFLRVHQITLNFIQTNLSGFYFEIIKD 767

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQ 732
           RLY GG  S +  +  TVL   L +  + +APIL H  E+ ++
Sbjct: 768 RLYAGGQDS-SYLATLTVLRHMLTAFEQALAPILVHTIEESYE 809


>gi|426240262|ref|XP_004014031.1| PREDICTED: isoleucine--tRNA ligase, mitochondrial [Ovis aries]
          Length = 951

 Score =  362 bits (929), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 189/421 (44%), Positives = 257/421 (61%), Gaps = 28/421 (6%)

Query: 152 FVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL 211
           F LHDGPPYANG+ H+GHALNKILKDI NRY +++  K+ +VPGWDCHGLPIE+KVL  L
Sbjct: 48  FCLHDGPPYANGDPHVGHALNKILKDIANRYHMMRGSKIHFVPGWDCHGLPIEMKVLSEL 107

Query: 212 DEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVF 271
              A+ +L+  ++R KA  FAKA ++ Q  +F R+G+ ADWNN Y T D  YEA Q+ +F
Sbjct: 108 GGKAQ-NLSAMEIREKARSFAKAAIEKQKLAFIRWGIMADWNNCYYTFDGRYEARQLRIF 166

Query: 272 GQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLN 331
            QM  +G IYR  KPV WSPSSRTALAEAELEY   HVSRS+Y  F ++   P  + LL+
Sbjct: 167 YQMYDKGLIYRSYKPVFWSPSSRTALAEAELEYNPEHVSRSVYVKFPLLKPSPKLASLLD 226

Query: 332 EFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLK 391
              P +   VWTT PWT+PAN AV    + +YAVV+  S   GD                
Sbjct: 227 GSSP-VSFLVWTTQPWTIPANQAVCYMPESKYAVVKCSS--SGD---------------- 267

Query: 392 DQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHP-VDNRQCPVVIGGDYI 450
                  I+ +D V ++ +  GT   +  T +G DL N    HP +  R+ P ++  +++
Sbjct: 268 -----LYILGADKVTSVASTLGTTFEVISTFSGVDLGNGTCAHPLISERESP-LLPANHV 321

Query: 451 TTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVA 509
           T   GTGLVHTAP HG EDY  + ++ L     V+++G FT+ AG +     VL +G  A
Sbjct: 322 TMTKGTGLVHTAPAHGMEDYSVASQHNLSTDCLVNEDGVFTDAAGPELQNKAVLKEGTDA 381

Query: 510 VVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
           V+  L    +L+ EE   H YPYDWRTKKP + RA++QWF ++   +  A + + +VK++
Sbjct: 382 VIMMLQAAKNLLKEEELVHSYPYDWRTKKPVVIRASKQWFVNITDIKTTAKELLKKVKFI 441

Query: 570 P 570
           P
Sbjct: 442 P 442



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/189 (42%), Positives = 111/189 (58%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V I P +L    D   KLR TLR+LLGN+  +    +SI 
Sbjct: 628 PPYGADVLRWWVAESNVFTEVTISPSLLNAARDDISKLRNTLRFLLGNVAGFNPETDSIP 687

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            + + +IDQY L  L+++   I +SY+ Y F K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 688 VNSMYVIDQYMLHLLQDLANKINDSYKQYDFGKVVRLLQAFYTRELSNFYFSIIKDRLYC 747

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L+  L  +VR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 748 ENADDPKRRSCQTALAEILDVMVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 801

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 802 WIKTSSIWK 810


>gi|47212355|emb|CAF93909.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 933

 Score =  362 bits (929), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 194/469 (41%), Positives = 275/469 (58%), Gaps = 32/469 (6%)

Query: 106 YKHTVDLPKTTFGMRANA---LVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYAN 162
           Y+ TV +P+T F M+      L +E  I K      ++     +   + F +HDGPPYAN
Sbjct: 1   YRDTVLVPRTDFPMKVTGQKLLDQEVAIQKKCGFADLYAWQRSRKAKKEFCVHDGPPYAN 60

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G+ H+GHALNKILKDI NR+++L+  +V Y+PGWDCHGLPIELK L  L   +   LTP 
Sbjct: 61  GDPHVGHALNKILKDIRNRFEMLKGRRVHYIPGWDCHGLPIELKALGELTPSS---LTPL 117

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           ++R KA  FA+  +  Q A+F+R+GV ADW++ Y T    YEAAQ++VF +M  +G+IY+
Sbjct: 118 QIRQKARAFAEEAITRQKAAFQRWGVMADWDHCYYTHHGVYEAAQLKVFQEMHGKGFIYQ 177

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
             KPV WSPSSRTALAEAELEY   HVSR+IYA F + + P + +  +   L ++ + VW
Sbjct: 178 DHKPVFWSPSSRTALAEAELEYNPDHVSRAIYATFPLTTVPANIASEVG--LDNVSVLVW 235

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TT PWT+PAN AV    K QY+VV+                       +      +++A+
Sbjct: 236 TTQPWTIPANQAVCYMPKAQYSVVK-----------------------RTDSSQMLLIAA 272

Query: 403 DLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           +   +L +  GT+L    T  GS LE     HPV   +   ++  +++T   GTGLVHTA
Sbjct: 273 ERTASLASLLGTELETVGTFTGSQLEGGICKHPVIPDKFVQLLPANHVTMAKGTGLVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           P HG +DY  +  + LP+   VD++GKFTE AG +   L V+ +G   V+  L +  +L+
Sbjct: 333 PAHGMDDYSVASHFNLPVECMVDEDGKFTELAGPELHNLAVMTEGTDKVISMLKDCGALV 392

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            EE   H YPYDWRTK+P I R + QWF      +  A +A+ +V  +P
Sbjct: 393 NEERCVHSYPYDWRTKQPVIIRPSRQWFIDTASLKDKAKEALKKVHILP 441


>gi|344344076|ref|ZP_08774941.1| Isoleucyl-tRNA synthetase [Marichromatium purpuratum 984]
 gi|343804360|gb|EGV22261.1| Isoleucyl-tRNA synthetase [Marichromatium purpuratum 984]
          Length = 946

 Score =  362 bits (929), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 283/475 (59%), Gaps = 34/475 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVAD-KNDGENFVLHDGPPYANGN 164
           YK T++LPKT F M+AN   REPE+ K W+   ++ R+ + +   E FVLHDGPPYANG+
Sbjct: 4   YKQTLNLPKTGFAMKANLAQREPEMLKRWESMDLYARIREARASAERFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NK+LKDII + + L  +   YVPGWDCHGLPIEL+V +   +  +K ++ ++ 
Sbjct: 64  IHIGHAVNKVLKDIIVKSRTLTGFDAPYVPGWDCHGLPIELQVEKKKGKPGQK-ISAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A   V  Q   FKR GV  DW+NPYLT+D  +EA  I   G++   G++++G 
Sbjct: 123 RRACRDYATRQVDGQRTDFKRLGVLGDWDNPYLTMDYGFEADIIRTLGRIIDNGHVHKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD------LG 338
           KPVHW     +ALAEAE+EY +   S +I   F++V  P +  G  +   PD        
Sbjct: 183 KPVHWCVDCGSALAEAEVEYADKQ-SIAIDVRFQLVD-PDALDGRCHT-APDGAGAGPAA 239

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           + +WTTTPWT+PAN AVA+NA+L+Y VVE +        AP  ++              +
Sbjct: 240 VVIWTTTPWTLPANQAVALNAELEYVVVEAEH-----DTAPGGRER-------------L 281

Query: 399 IVASDLVPTLEAKWGT-KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           IVA  L+     +WG  +  +     G DLE  R  HP  +R+ PV++ G++++ ++GTG
Sbjct: 282 IVAEGLLKDTMDRWGIERYRVLGYARGIDLEGLRLHHPFYDREVPVIV-GEHVSLDAGTG 340

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
            VHTAPGHG +DY+   +YGLP+ +PV  +G+F      F+G  V    N  V++ L  +
Sbjct: 341 AVHTAPGHGLDDYLVGQRYGLPVDNPVGGDGRFLPGTELFAGEHVF-KANEHVLEALKAR 399

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            +L++E    H YP+ WR K P IFRAT QWF S+E  G R AA+  I +V W+P
Sbjct: 400 GALLLETRITHSYPHCWRHKTPIIFRATPQWFISMEQAGLRAAALGEIAEVDWLP 454



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 118/203 (58%), Gaps = 10/203 (4%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD++RLWV+  DY G++ +  ++L++ +D YR++R T R+LL NL+ +   G+ I   +
Sbjct: 630 GADIIRLWVAGTDYRGEMSVSDEILKRTADSYRRIRNTARFLLANLNGFDPAGDLIDPAE 689

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +D++A+ +   + + I  +Y+ YQF  I Q +Q+F +VDL  FY DV KDR YT   
Sbjct: 690 MLALDRWAVDRAARLQQEIVAAYDDYQFHLICQKLQQFCVVDLGGFYLDVIKDRQYTTQA 749

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 756
            S  RRSCQ+ +   + ++ R +APIL   A+++W+++P       G   E  F  +W  
Sbjct: 750 DSLARRSCQSAMYHIIEAMARWMAPILSFTADEIWRHIP-------GERGETPFTEQWYA 802

Query: 757 -LDEKWRTFPVGEIYFWGKILEV 778
            L       P+G   FW +++ V
Sbjct: 803 GLFTLAEDEPLGRA-FWDRVIAV 824


>gi|451981687|ref|ZP_21930036.1| Isoleucyl-tRNA synthetase [Nitrospina gracilis 3/211]
 gi|451761140|emb|CCQ91300.1| Isoleucyl-tRNA synthetase [Nitrospina gracilis 3/211]
          Length = 939

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 200/481 (41%), Positives = 278/481 (57%), Gaps = 37/481 (7%)

Query: 94  KAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NF 152
           K  +G+ K +  YK T++LP+T F M+AN + REPE+   W+   ++ R+ + + G   +
Sbjct: 2   KTEDGDTKMD--YKDTLNLPQTDFPMKANLVQREPEVLAAWEAEDIYQRIREASKGRPKY 59

Query: 153 VLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD 212
           V HDGPPYANG++HMGHALNK+LKD I R   ++ +   +VPGWDCHGLPIE +V + L 
Sbjct: 60  VFHDGPPYANGHIHMGHALNKVLKDFIVRIMTMKGFDATFVPGWDCHGLPIEHQVGKEL- 118

Query: 213 EDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFG 272
           +  K+DL  +++R    ++A   V  Q   FKR GV+ADW+ PYLT+   YE   +  F 
Sbjct: 119 KSKKQDLGKNEVRKLCREYAARFVDIQKEEFKRLGVFADWDKPYLTMSFGYEGTIVREFL 178

Query: 273 QMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNE 332
           +    G +Y+G KPVHW    RTALAEAE+EY + H S SIY  F + S   +    ++ 
Sbjct: 179 KFLESGMVYKGLKPVHWCTHCRTALAEAEVEYAD-HNSPSIYVKFAVKSEWKNQIDGVD- 236

Query: 333 FLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKD 392
                   +WTTTPWT+PAN AV ++   +Y  VEI     G+                 
Sbjct: 237 -AKKASFVIWTTTPWTLPANLAVCLHPDFEYTAVEIA----GEQ---------------- 275

Query: 393 QKKVFIIVASDLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYIT 451
                 IVA++ +  L  +W  T   +    AG DLE     HP  +R+ PV++ GD++T
Sbjct: 276 -----YIVAAERLSALILEWDVTDYKVLGKCAGKDLEGVVCQHPFIDRESPVIL-GDHVT 329

Query: 452 TESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVV 511
            E GTG VHTAPGHGQEDY+  LKYGL   +PVDD G F  E   F G  V+   N  ++
Sbjct: 330 LEQGTGCVHTAPGHGQEDYIVGLKYGLDTYNPVDDGGVFKPEVEFFGGQFVM-KANPEII 388

Query: 512 KYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWV 569
           K L+E   LI ++  +H YP+ WR + P IFRAT QWF S++  G RQ A+  I + +WV
Sbjct: 389 KKLEELGKLIHQDRVDHSYPHCWRCRTPIIFRATAQWFISMDDKGLRQKALAEIDKTRWV 448

Query: 570 P 570
           P
Sbjct: 449 P 449



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 114/182 (62%), Gaps = 6/182 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGA++LRLWV+S +Y  D+ I  ++L+++++ YRK+R T R+LLGNL D+    + +  D
Sbjct: 628 YGAEILRLWVASENYREDIRISHEILKRLTEAYRKIRNTFRFLLGNLSDFDPKTDRVPVD 687

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           ++  ID Y L + + + + I++++E Y+F   +     F IVDLS FY D+ KDR+YT  
Sbjct: 688 EMEEIDHYILHRFKKVNERIQKAFEEYEFHVFYHTFYNFCIVDLSAFYLDILKDRIYTYP 747

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
            TS  RRS QT +   L  + +++APIL   A++VW+ +P     +DGS  E V  S +P
Sbjct: 748 KTSHGRRSGQTAMYDLLKGMAQMMAPILSFTADEVWKYMP-----DDGSKTESVHLSVFP 802

Query: 756 VL 757
            L
Sbjct: 803 DL 804


>gi|254446531|ref|ZP_05060007.1| isoleucyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198260839|gb|EDY85147.1| isoleucyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 911

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 206/464 (44%), Positives = 269/464 (57%), Gaps = 46/464 (9%)

Query: 119 MRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGNLHMGHALNKILKD 177
           MRAN   REP     WD   ++ ++ +KN DG  F+LHDGPP+ NG LH+GHALNK LK+
Sbjct: 1   MRANLGKREPARVDHWDKIGLYQKLQEKNADGPAFILHDGPPFTNGELHLGHALNKTLKE 60

Query: 178 IINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVK 237
           I+ RYK  Q +   Y+PGWDCHGLPIE KV + L  +  KDL  ++LR K   F++  + 
Sbjct: 61  IVLRYKAAQGFHTPYIPGWDCHGLPIEHKVTKELQAEG-KDLPTAELRDKCDAFSEHWID 119

Query: 238 AQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTAL 297
            Q + FKR GV ADW N Y T  P YEA  +        Q  +YR KKPV+WS    TAL
Sbjct: 120 VQRSQFKRLGVLADWENEYKTKKPSYEAEILRTLASFVEQDLVYRSKKPVYWSIPCATAL 179

Query: 298 AEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAV 357
           AEAE+EY E H S SI+  F +  A  +  G+       L + +WTTTPWT+PAN AVAV
Sbjct: 180 AEAEIEYRE-HSSPSIWVAFDI--AEKAKFGIDKP----LSVVIWTTTPWTIPANLAVAV 232

Query: 358 NAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-L 416
           + ++ YA V                         D  +   IVA DL     A  G +  
Sbjct: 233 HPRMTYAFV-------------------------DAGERVHIVAKDLAEQFAADLGLENW 267

Query: 417 VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKY 476
            I   + G  LEN +  HP  +R  P+V+  DY+TTESGTG VHTAPGHGQEDY+T LKY
Sbjct: 268 KIVHEVQGETLENVQSRHPFIDRPSPIVL-ADYVTTESGTGCVHTAPGHGQEDYMTGLKY 326

Query: 477 GLPILSPVDDEGKFTEEAGK---FSGLDVLGD-----GNVAVVKYLDEQMSLIMEEPYEH 528
           GL I  PV+DEGK+ ++        G  VL +      N  V+K LDE  +L+ ++   H
Sbjct: 327 GLDIYCPVNDEGKYADDGQVPDFLVGESVLEEKGWVPANGKVLKALDEAGALLKKKKITH 386

Query: 529 KYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            YP+ WR+K P IFRA +QWF +++  G R+AA++AI QVKW+P
Sbjct: 387 SYPHCWRSKTPVIFRAVDQWFVAIDKNGKRKAALEAIEQVKWIP 430



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 107/188 (56%), Gaps = 7/188 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSISYD 635
           +G+DV+RLWV+S D+  D+ I  Q+L  + D YR  R T R+ L NL+D+    +S+   
Sbjct: 608 FGSDVVRLWVASTDFRNDIGISEQILGGVGDAYRLFRNTFRFQLSNLYDFDFEKDSMPIS 667

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  +D++A+ ++  + + + ++YE+Y+F K+FQ+  +F  V LS+ Y D+ KDRLYT  
Sbjct: 668 ELHELDRWAVHKVGELAEAVEKAYENYEFHKVFQLCNQFCSVTLSSLYHDILKDRLYTLA 727

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK-W 754
             +  RRS QT +     ++VR+  PI+P   ++ W     AY  E     E     + W
Sbjct: 728 YDAPLRRSSQTAIYHIFKTLVRITGPIIPFTTDEAW-----AYFKEGSDFTEDALALQPW 782

Query: 755 PVLDEKWR 762
           P   + W+
Sbjct: 783 PTEAKDWQ 790


>gi|88813005|ref|ZP_01128248.1| Isoleucyl-tRNA synthetase, class Ia [Nitrococcus mobilis Nb-231]
 gi|88789783|gb|EAR20907.1| Isoleucyl-tRNA synthetase, class Ia [Nitrococcus mobilis Nb-231]
          Length = 940

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 196/473 (41%), Positives = 280/473 (59%), Gaps = 35/473 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T++LPKT F MRAN   REP+  + W    ++ ++ +   G ++F+LHDGPPYANG 
Sbjct: 4   YKETLNLPKTAFPMRANLAQREPQRTEQWRRADLYGQIREARRGRKHFILHDGPPYANGE 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + + L      YVPGWDCHGLPIE KV QSL E   K +TP   
Sbjct: 64  IHIGHAVNKILKDIIVKSRTLDGLDAPYVPGWDCHGLPIEHKVEQSLVE-VGKTVTPKDF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           RA   +FA   V+ Q   F+R GV  DW++PYLT+D   EA  + V G +  +G++ RG 
Sbjct: 123 RAACRRFAAEQVEGQRRDFQRLGVVGDWDHPYLTMDFRTEADILRVLGDLVAKGHLKRGY 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAP--PSTSGLLNEFLPDLGLAVW 342
           +PVHW     +ALAEAE+EY E H S ++   F  V+A       G   E  P L + +W
Sbjct: 183 RPVHWCIDCSSALAEAEVEY-EPHTSPAVDVRFPAVNAEAFAECFGARIEAAP-LSVVIW 240

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN AVAV+ +L+Y +  +                       D  + ++++A+
Sbjct: 241 TTTPWTLPANQAVAVHPELEYVLAAV-----------------------DGGREYLVLAA 277

Query: 403 DLVPTLEAKW--GTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
            L     A++  G   +I +   G +LE  +  HP   R  P+V+  +Y+TT++GTG VH
Sbjct: 278 ALHEQALARYQVGAFQIIGRPCRGVELERLQLQHPFYERIVPIVL-AEYVTTDTGTGAVH 336

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG +DY+T  +Y LP+ +PVD  G+F  +   F+G  V  D N A+++ L ++  L
Sbjct: 337 TAPGHGSDDYLTGQRYDLPLNNPVDATGRFVADTKFFAGQLVF-DANAAIIELLAKRGML 395

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPP 571
           +  E Y H YP+ WR K P +FRAT QWF ++E    R+ A+ A+ Q++W PP
Sbjct: 396 LNHERYSHSYPHCWRHKTPILFRATPQWFLNLESNSVREQALAALPQIRWYPP 448



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 111/178 (62%), Gaps = 8/178 (4%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GADVLRLWV++ DY G++ +  ++L++ +D YR++R T R+LLGNL  +    + ++ + 
Sbjct: 622 GADVLRLWVAATDYRGEMAVSDEILKRTADAYRRIRNTARFLLGNLAGFEPARHQVAPER 681

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +D++A+ +   + + ++E+Y  Y F +I+Q +  F ++D+  FY DV KDR YT   
Sbjct: 682 MLALDRWAVDRAWQLQQAVQEAYREYDFHQIYQRVHHFCVLDMGGFYLDVIKDRQYTTQI 741

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW 754
            S  RRSCQT +   + ++VR +APIL   AE++W+++P       G     VF ++W
Sbjct: 742 DSLARRSCQTAMCHIIEALVRWLAPILSFTAEEIWEHMP-------GPREPSVFLAEW 792


>gi|366053396|ref|ZP_09451118.1| isoleucyl-tRNA synthetase [Lactobacillus suebicus KCTC 3549]
          Length = 932

 Score =  361 bits (927), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 204/468 (43%), Positives = 277/468 (59%), Gaps = 35/468 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E E   +W +++V+ +    N+G+  FVLHDGPPYANG
Sbjct: 2   RVKETLNLGKTKFPMRGNLPVKEVERQNIWSENKVYEQRQKLNEGKPTFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHALNKI KDII RYK +  ++  YVPGWD HGLPIE + L  +  D KK +  S 
Sbjct: 62  NIHIGHALNKITKDIIVRYKSMSGFRAPYVPGWDTHGLPIEQQ-LTKMGYDRKK-MNTSD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    K+A   V  Q   FKR GV  +WNNPYLTL  EYEAAQ+ VFG  + +G +YRG
Sbjct: 120 FRDLCRKYALEQVDKQREDFKRLGVAGEWNNPYLTLQKEYEAAQVRVFGAFAKRGLLYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +ALAEAE++Y +     + Y   ++V       G+L++   +  + VWT
Sbjct: 180 KKPVFWSWSSESALAEAEVDYKDVTSPSAFYGE-QVVDG----KGVLDD---NTYMVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+P +  + ++A   YAVV                 +  G+   D+K  F++ A  
Sbjct: 232 TTPWTIPGSEGITIDATFDYAVV-----------------THSGD---DRK--FVLAAEL 269

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           +    E      + I KT+ G DL+     HP    +  V + GD++T ++GTGLVHTAP
Sbjct: 270 VNKCAELFEWEDVKILKTVKGKDLDRVTAQHPFFPEKKLVTMLGDFVTLDAGTGLVHTAP 329

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           G G++DY    +YGL I  PV+D+G  T+EAG  F G+    D N   +  L +Q  L+ 
Sbjct: 330 GFGEDDYYVGKQYGLDIFVPVNDQGYLTKEAGPDFEGV-FYDDANQISLDKLKDQGLLLK 388

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             P +H YP+DWRTKKP IFRAT+QWFASV+  R   + AI  VK+ P
Sbjct: 389 YMPIKHSYPFDWRTKKPIIFRATDQWFASVDKIRDEILSAIDDVKFYP 436



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 120/205 (58%), Gaps = 18/205 (8%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           P +     GA+++RLWV SVD + DV +  ++ +Q+S+ YRK R T+R+LL N  D+   
Sbjct: 608 PNKVVKQMGAEIIRLWVMSVDSSADVRVSMEIFKQVSESYRKFRNTMRFLLANTTDFDPE 667

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            +S+ YDDL  +D++ L +L   V++  + +++Y+F  I++ +  F+  +LS FY +VAK
Sbjct: 668 KDSLKYDDLESVDKFMLVKLNEFVESTEKHFDNYEFLDIYKQLMNFVTTELSAFYMNVAK 727

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF 748
           D +Y  G  S TRRS QTV    L+++ +++ P+LPH  E++WQ L            EF
Sbjct: 728 DVVYIDGANSKTRRSMQTVFYKVLVTMTKLLTPVLPHTTEEIWQYLK--------EPEEF 779

Query: 749 VFESKWPVLD---------EKWRTF 764
           V  ++ P +D         +KW +F
Sbjct: 780 VQLAEMPQVDHYEGEEELLKKWDSF 804


>gi|302507938|ref|XP_003015930.1| hypothetical protein ARB_06242 [Arthroderma benhamiae CBS 112371]
 gi|291179498|gb|EFE35285.1| hypothetical protein ARB_06242 [Arthroderma benhamiae CBS 112371]
          Length = 1012

 Score =  361 bits (926), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 206/483 (42%), Positives = 282/483 (58%), Gaps = 47/483 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R  AL  + +  K   D     +  ++     F LHDGPPYANG+L
Sbjct: 12  WSSTLKLPKSTFPPRI-ALADQSKYLKRCSDDLYSWQQRNRPATATFTLHDGPPYANGDL 70

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDE-----DAKKDLT 220
           H+GHALNKILKDII R +L +  +V YVPGWDCHGLPIELK LQ   E      A +D  
Sbjct: 71  HIGHALNKILKDIICRVQLAKGKRVHYVPGWDCHGLPIELKALQGQKELGDLRSAGRD-G 129

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
            +++R+ A + A+ TV  QM  F+ + +  DW N Y T++ ++E  Q+ VF +M  +G I
Sbjct: 130 AAQIRSAARQLAEKTVSQQMEGFRNWAIMGDWENAYTTMNKDFERRQLAVFLEMVEKGLI 189

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL---PDL 337
           YR  KPV+WSPSS TALAEAELEY E H+S +    F + + P   S +L   L    D+
Sbjct: 190 YRRYKPVYWSPSSGTALAEAELEYKEDHISTAALVKFVLDNLP---SQILEHPLLAGNDI 246

Query: 338 GLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVF 397
              +WTTTPWT+PANAA+AVN   +Y +V+                +R G +L  Q ++ 
Sbjct: 247 SAVIWTTTPWTLPANAALAVNPDFEYTIVD---------------STRHGKLLVAQSRL- 290

Query: 398 IIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVH----PVDNRQCPVVIGGDYITTE 453
                 L   LE  +    V+   + GS+L N  Y      P   +Q   +I  +++T +
Sbjct: 291 ----QYLQELLEDDF---TVVIPAIMGSELLNSTYRSHFKGPESEKQ--RIIAAEFVTAD 341

Query: 454 SGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNV 508
           +G+G+VH APGHG EDY   L  G+P  +PVD EG+FT+ A        +G +VLGDGN 
Sbjct: 342 AGSGIVHCAPGHGMEDYEACLALGIPAYAPVDGEGRFTQSAMPTKPDLLTGKEVLGDGNH 401

Query: 509 AVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
           AV+K+L E   LI +  Y+HKYPYDWR+K P I RATEQWFA V   R  A+ A+  V++
Sbjct: 402 AVIKHLSETGILIHKHDYKHKYPYDWRSKLPVIIRATEQWFADVGDIRGEAIQALQSVQF 461

Query: 569 VPP 571
           +PP
Sbjct: 462 IPP 464



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 92/158 (58%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
           G D LRLW +  DYT DV+IG QVL+ ++    K R T + LLG L D+   N + Y+ L
Sbjct: 678 GPDALRLWAAGSDYTKDVVIGQQVLKAVNISLHKFRVTFKLLLGALQDFDPRNEVPYESL 737

Query: 638 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
             ID+ AL QL N+VK+ +E+ +  +FFK    + ++  ++ S FY +  KDRLY    +
Sbjct: 738 HAIDKIALVQLHNLVKSSQEAVDKMEFFKAVTAMNKWANLEFSAFYIEAIKDRLYADSES 797

Query: 698 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
             +RR+ QT L      I  ++ PI+P L E+ W++ P
Sbjct: 798 GMSRRAAQTTLFHIYTHIQSLLGPIVPLLVEETWEHTP 835


>gi|289522932|ref|ZP_06439786.1| isoleucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503956|gb|EFD25120.1| isoleucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 927

 Score =  361 bits (926), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 201/471 (42%), Positives = 280/471 (59%), Gaps = 43/471 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T++LPKT+F M+AN   RE ++ K W+D  ++ ++ +K  G E F+LHDGPPYANGN
Sbjct: 5   YKDTLNLPKTSFPMKANLAKRELDMLKFWEDIDIYEKLMEKRRGAEPFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKD-LTPSK 223
           +H+G A NKILKD+I +YK ++ Y   YVPGWD HGLPIEL+ L+  DE   KD L P +
Sbjct: 65  IHIGTAFNKILKDMIPKYKWMRGYFSPYVPGWDTHGLPIELRTLK--DEGLDKDSLHPIE 122

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
           LR K  ++A+  +  Q   FKR GV  DW NPY+T   EYEA ++E F +M   GY+YRG
Sbjct: 123 LRKKCMQYAERYIDVQRDEFKRLGVIGDWENPYITFKSEYEAIELEAFAEMVDHGYVYRG 182

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP--DLGLAV 341
           +KP++W    +TALA AE+EY E   S SIY  + + ++  S       FL   +    +
Sbjct: 183 QKPIYWCTDCQTALAAAEIEY-EDIYSPSIYVAYSLKASDFS-------FLKGREAYAII 234

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PA+ A+AV+    Y          GD                   K+F++ A
Sbjct: 235 WTTTPWTLPASLAIAVHPDFDYVFAS-----SGD-------------------KIFLL-A 269

Query: 402 SDLVPTLEAKWGTKL-VIKKTLAGSDLENCRYVHPV-DNRQCPVVIGGDYITTESGTGLV 459
             L+  ++ + G     I   + G +LE  + +HP  D+R+   V+ G+Y++ + G+G V
Sbjct: 270 KGLIEKVQHQTGIHFDSILHEIKGKELEGRKAIHPFYDDREILFVL-GEYVSLDEGSGCV 328

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG ED+ T +KYGL I +PVDD G FT E     GL  L DG+  ++  L E+  
Sbjct: 329 HTAPGHGVEDFETGVKYGLEIYNPVDDRGYFTPETPLVGGLS-LDDGSKKLMGVLRERGR 387

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ E    H YP+ WR KKP IFRAT QWF +V  FR  ++ AI  V+W+P
Sbjct: 388 LLGEGKIMHSYPHCWRCKKPVIFRATNQWFIAVSKFRDDSLKAISSVQWIP 438



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 125/209 (59%), Gaps = 8/209 (3%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    ++G V  V PQE  G YGAD+LRLWV+S DY  D+ I   +LR + + YR
Sbjct: 594 VDGEGRKMSKSLGNV--VQPQEVIGKYGADILRLWVASTDYRNDIRISETILRNLVESYR 651

Query: 611 KLRGTLRYLLGNLHDWRV-GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R TLRY+LGNL D+    +S+ ++++  +D + L +L+ ++  + + +E+++F     
Sbjct: 652 RIRNTLRYILGNLSDFDPHKDSVPFEEMEEMDLWILSKLQGVISKVTKGFENFEFHVPTF 711

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            I +  + +LS FY DV KDRLY   + S  RRSCQT L   +  +  +++PIL   +E+
Sbjct: 712 TIHQLCVNELSAFYLDVNKDRLYVEASDSKLRRSCQTALWNIIKELTLMLSPILSFTSEE 771

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKWPVLD 758
           VWQ L       D S +E VF   WPVLD
Sbjct: 772 VWQYLRQI----DNSLSESVFLEDWPVLD 796


>gi|160903062|ref|YP_001568643.1| isoleucyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|189082329|sp|A9BI29.1|SYI_PETMO RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|160360706|gb|ABX32320.1| isoleucyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 919

 Score =  361 bits (926), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 205/470 (43%), Positives = 273/470 (58%), Gaps = 47/470 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQV--FLRVADKNDGENFVLHDGPPYANG 163
           YK T++LPKT+F M+AN   +EP+I + W+D  +  +LR   +  G  FVLHDGPPYANG
Sbjct: 3   YKDTINLPKTSFKMKANLKEKEPQILQKWEDINIAYYLRNI-RIGGTKFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMG ALNK+LKDI+ +YK L+ Y   YVPGWD HGLPIE  V   L E A   L+  +
Sbjct: 62  DIHMGTALNKVLKDIVLKYKTLRGYDAPYVPGWDTHGLPIEHNVTTKLGEKANA-LSKLE 120

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
           +R     +A   V  Q  SFKR GV   W+ PYLTL PEYEA  +E+   +   G IYRG
Sbjct: 121 IRKLCEDYAMKYVDIQRESFKRLGVIGFWDKPYLTLKPEYEAKVLEILRSIVESGNIYRG 180

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++W    +TALAEAE+EY + H S SIY  F +V       G  N +     + +WT
Sbjct: 181 TKPIYWCTECQTALAEAEVEYHD-HTSDSIYVKFPLV-------GENNTY-----VIIWT 227

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+AV+    YA VEI                  GN        + I+A +
Sbjct: 228 TTPWTLPANVAIAVHPNFDYAKVEI------------------GN-------EYWIMAKE 262

Query: 404 LV-PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV  TL+        I  T  G  LE  +  HP  +R+  +V+  DY+T + GTG VHTA
Sbjct: 263 LVDKTLKEAGIDDYKIIDTFKGLTLEGEKARHPFVDRESLLVL-ADYVTLDEGTGCVHTA 321

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG EDY+T  KY L ++SPVD +G FT+EAGK+ G+ +  + N  ++K L E   L+ 
Sbjct: 322 PGHGMEDYITGTKYNLQVISPVDSQGYFTDEAGKYKGMKIW-EANKEIIKDLKENGFLVQ 380

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
                H YP+ WR K P IFRAT QWF  +E   +R+  ++ I +V W+P
Sbjct: 381 SGKITHSYPHCWRCKNPVIFRATPQWFIDLEKNNYREKVLEEIKKVNWIP 430



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 131/201 (65%), Gaps = 9/201 (4%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLWV+S DY  D+ I   +L Q  + YRKLR T+R+LLGN++D+    +S++Y+
Sbjct: 611 YGADILRLWVASADYRMDIKISYNILEQQVETYRKLRNTIRFLLGNINDFDPDEDSVAYE 670

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           ++  IDQ+AL +L N++KN+ ++Y++Y+F+K+  +I  F  +D+S+ Y D+ KDR+Y  G
Sbjct: 671 EMLEIDQWALMKLHNLIKNVTKAYDNYEFYKVHYLINNFCTIDMSSTYLDIIKDRIYVEG 730

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             S  RRS QTVL    +++ ++I+PILP  AE+V+++L ++      +  E +F   WP
Sbjct: 731 KKSKLRRSAQTVLYETAIALNKMISPILPFTAEEVYEHLNYS------NKYETIFAELWP 784

Query: 756 VLDEKWRTFPVGEIYFWGKIL 776
              E + +  + E   W KI 
Sbjct: 785 EYKENYLSEELEEK--WNKIF 803


>gi|94264111|ref|ZP_01287910.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93455527|gb|EAT05717.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 949

 Score =  361 bits (926), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 208/482 (43%), Positives = 277/482 (57%), Gaps = 48/482 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           Y+ T++LP+T F M+AN   REPE+ + W    ++  +     G   ++LHDGPPYANG+
Sbjct: 3   YRDTLNLPQTAFKMKANLAQREPEMLQRWQQEDLYGAIDRATAGRPLYILHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKDII + K +  Y   YVPGWDCHGLPIEL V + L    K ++     
Sbjct: 63  LHMGHALNKILKDIILKAKRMSGYHCPYVPGWDCHGLPIELNVDKELGSK-KAEVDKLAF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   +  Q   F R GV  DW  PYLT+D  YEAA    F    L G I R +
Sbjct: 122 RETCRRYAAKWIAIQREEFARLGVLGDWQQPYLTIDYSYEAAIAREFNNFLLNGAISRSR 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVF-RMVSAPPSTSGLLNEFLPD---LGLA 340
           KPVHW  S  TALAEAE+EY E H S SIY  F    +A  S +  + E   D   L + 
Sbjct: 182 KPVHWCASCTTALAEAEVEYAEQH-SPSIYVKFPLAPAAVASLAAAVPELAVDERPLAVV 240

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AVA++    YA VE                   G +L        I+
Sbjct: 241 IWTTTPWTLPANLAVALHPDFTYAAVE-----------------HDGEIL--------IM 275

Query: 401 ASDLVPTLEAKWGT---KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           A++LV  + A+ G    KL+     A    ++CR  HP+  RQ  ++I  DY+T ESG+G
Sbjct: 276 AAELVERVMAECGLSDYKLLASFPAAALLGQSCR--HPLLERQ-SLLIAADYVTLESGSG 332

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
            VHTAPGHG++DY++ LK+ LPILSPVD+ G FT EAG + GL +L  GN  ++  L   
Sbjct: 333 CVHTAPGHGRDDYLSGLKHNLPILSPVDERGHFTAEAGPYEGLFIL-KGNKRIIADLQAG 391

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG---------FRQAAMDAIGQVKW 568
            +L+ E+   H YP+ WR KKP +FRATEQWF +++           R+ A+ AI +V+W
Sbjct: 392 GALLGEQAITHSYPHCWRCKKPVMFRATEQWFIAMDAACGDDPEQTLRRRALAAIDEVEW 451

Query: 569 VP 570
           +P
Sbjct: 452 IP 453



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 106/185 (57%), Gaps = 2/185 (1%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRK 611
           V+G  +    ++G V   P +    +GA++LRLW +S DY  D+ I   +LRQ++D YRK
Sbjct: 608 VDGQGKKMSKSVGNVI-APDKIIKQHGAEILRLWAASEDYRDDIRISENILRQLADAYRK 666

Query: 612 LRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 670
            R T+R++LGNLHD+    +    + +  +D++ L + E   +  +ESY+ ++F + +  
Sbjct: 667 TRNTIRFMLGNLHDFEPARHRRPAEGMAELDRWILARFELFRQKSQESYDKFEFHQFYHQ 726

Query: 671 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
           +  F  V LS  Y D+ KDRLY        RR  Q+VL      ++R++AP+L  LA + 
Sbjct: 727 LYNFCTVSLSALYLDIVKDRLYILPPADPRRRDAQSVLYEICDGLLRLLAPVLSFLAAEA 786

Query: 731 WQNLP 735
           W++LP
Sbjct: 787 WEHLP 791


>gi|449270246|gb|EMC80942.1| Isoleucyl-tRNA synthetase, mitochondrial, partial [Columba livia]
          Length = 926

 Score =  361 bits (926), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 187/426 (43%), Positives = 259/426 (60%), Gaps = 27/426 (6%)

Query: 150 ENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQ 209
           + F LHDGPPYANG+ H+GHALNKILKDI NR+ +++ YKV YVPGWDCHGLPIELK L 
Sbjct: 19  QEFCLHDGPPYANGDPHVGHALNKILKDITNRFYVMRGYKVHYVPGWDCHGLPIELKALS 78

Query: 210 SLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIE 269
            +     ++L+P ++R KA +F++  ++ Q ++F R+GV ADW+N Y T DP+YEA Q+ 
Sbjct: 79  EVR--GAENLSPMEIRQKAREFSERAIEKQKSAFIRWGVMADWDNCYRTSDPKYEANQLR 136

Query: 270 VFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL 329
           VF +M  +G IY+  KPV WSPS++TALAEAELEY E HVSR++Y  F ++ +PP  + +
Sbjct: 137 VFYKMYDKGLIYQDYKPVFWSPSTKTALAEAELEYNEKHVSRAVYVKFPLLKSPPKLASV 196

Query: 330 LNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNV 389
           ++   P   + VWTT PWTVPAN AV       Y++V+  +  E                
Sbjct: 197 IDGSSP-ASVLVWTTQPWTVPANQAVCYMPDSAYSIVKCTTTGEQ--------------- 240

Query: 390 LKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDY 449
                    I+A+D V +  A   T+  +  T  G DL +    HP    +   ++  ++
Sbjct: 241 --------FILAADRVESTAAILDTQFEVMSTCKGVDLADGSCAHPTIPGRVSPLLPANH 292

Query: 450 ITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNV 508
           +T   GTGLVHTAP HG EDY  +  + L     VD+ G FTE AG +    +VL +GN 
Sbjct: 293 VTMAKGTGLVHTAPAHGMEDYSVASHHQLSTDCLVDEGGFFTEAAGPQLKNKNVLEEGNE 352

Query: 509 AVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
           AV++ L    SL+ EE Y H YPYDWRTKKP I RA++QWF +    + AA + + +VK 
Sbjct: 353 AVIQMLQAAGSLLKEEKYVHSYPYDWRTKKPMIIRASKQWFVNTASVKAAAQEVLKKVKV 412

Query: 569 VPPQEA 574
           +P   A
Sbjct: 413 IPTSAA 418



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/189 (42%), Positives = 112/189 (59%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS 633
           P YGADVLR WV+  +   +V+IGP VL    D   KLR TLR++LGNL  +    +SI 
Sbjct: 600 PPYGADVLRWWVAESNVFTEVLIGPVVLNAARDDINKLRNTLRFMLGNLAGFSPETDSIP 659

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
             ++ ++DQY L  L++    + E+Y+ Y + K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 660 ASEMYIVDQYMLHLLQDYGSKVTEAYKEYDYSKVVRLLQAFCSRNLSNFYFTIIKDRLYC 719

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQTVL+  L  +VR  APILPHLAE+V+Q LP+         +E VF + 
Sbjct: 720 EEEKDPKRRSCQTVLAQALDIVVRSFAPILPHLAEEVFQYLPYK------KDSEGVFRTG 773

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 774 WINASSAWK 782


>gi|326435250|gb|EGD80820.1| isoleucyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 1096

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 206/498 (41%), Positives = 289/498 (58%), Gaps = 59/498 (11%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADK---NDGENFVLHDGPPYAN 162
           +  T+ LP+T F MRANA  REP I +       F  V ++    DG  F+LHDGPP+AN
Sbjct: 99  FSDTLCLPQTAFPMRANAATREPMIQE-----NCFKGVYEELAARDGPAFILHDGPPFAN 153

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL-------DEDA 215
           GNLHMGH LNK LKD+I RYK ++ +++ +VPGWDCHGLPIE K + S        D   
Sbjct: 154 GNLHMGHVLNKALKDMIVRYKAIRGHRISFVPGWDCHGLPIEAKAVTSTSASSGTADASK 213

Query: 216 KKDLT----PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVF 271
            K LT    P ++R  A K A+  +K Q   F R GV ADW++PYLTL P+YEA Q+ +F
Sbjct: 214 PKGLTIASDPRRIRKAARKLAEGAIKEQKTDFVRLGVMADWDHPYLTLHPQYEADQVALF 273

Query: 272 GQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMV------SAPPS 325
            +M   G + R  +PV+WSPSS+TALAEAE+EY E H S SI+    +V       A  S
Sbjct: 274 LRMMQAGMVQRRYRPVYWSPSSQTALAEAEIEYDE-HTSTSIFVRLPLVVGDSLKRAITS 332

Query: 326 TSGLLNEFLP--------DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSA 377
           + G  N            ++   +WTTTPWT+PAN A+AV++ L Y +V+ ++   GD  
Sbjct: 333 SDGAANTAAAAATSTTPVNVSAVIWTTTPWTLPANQAIAVHSDLGYVLVQ-ETKAGGDVM 391

Query: 378 APANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPV- 436
             A           D+ + F+              GT  +I   + G +L +  Y HPV 
Sbjct: 392 VVAE-------ACLDRCRKFL------------PEGTTRIIGH-IQGRELLDSSYRHPVW 431

Query: 437 DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI-LSPVDDEGKFTEEAG 495
           + R CPV    D++T+++GTG+VH AP HG EDY      G+ I L+ VD+ G++T++AG
Sbjct: 432 EGRTCPV-FHADHVTSDAGTGVVHMAPAHGLEDYHACAANGMQIDLNLVDNTGRYTQDAG 490

Query: 496 K-FSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG 554
               GL+ +G G   V++ L E   L+ +E ++H+YP DWRTKKP + RAT+QWFA ++ 
Sbjct: 491 DALQGLEAMGAGGKKVLELLQEGNRLLQQEAFQHRYPLDWRTKKPIMLRATQQWFAQLQD 550

Query: 555 FRQAAMDAIGQVKWVPPQ 572
            + AA+ A+  V+ VP Q
Sbjct: 551 IKHAALAALDNVQLVPEQ 568



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 100/159 (62%), Gaps = 1/159 (0%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           ++ P YGADVLRLW +S  Y  DV IGP  L   ++  RK+R + R++LGNL D+ +  +
Sbjct: 753 KKEPAYGADVLRLWAASTAYQHDVNIGPSTLSITAENLRKIRNSCRFMLGNLADFSL-ET 811

Query: 632 ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRL 691
            +  DL  +D+Y L ++  +   +R SYESY F +  Q +  FI  DLS+FYF+++KDRL
Sbjct: 812 DAVSDLSDLDKYMLHRISQLDAGMRASYESYNFLRATQDLLNFINTDLSSFYFEISKDRL 871

Query: 692 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
           Y    T  +RR+ QTV+   L  +V  ++P+  HLAE+V
Sbjct: 872 YLSSPTGASRRAAQTVVHHILDFVVHAVSPVACHLAEEV 910


>gi|126649711|ref|ZP_01721947.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126593430|gb|EAZ87375.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 921

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 197/470 (41%), Positives = 279/470 (59%), Gaps = 45/470 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ +PKT F MR N    EP++   W++  +     ++ +G   +VLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTDFPMRGNLPANEPKMQDKWNEMDINKLQMERTEGRPEYVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPS 222
           +H+GHALNK+LKD+I R++ +  Y V Y+PGWD HGLPIE    Q+L      +K+++ +
Sbjct: 63  IHIGHALNKVLKDMITRHRSMTGYHVNYIPGWDTHGLPIE----QALTNKGVKRKEMSVA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
             R    ++A   +  Q   F+R G+  +W NPY+TL PE+EA QIEVFG+M+ +GYIY+
Sbjct: 119 AFRQLCEEYAYEQIDNQRNQFRRLGIRGNWENPYITLKPEFEARQIEVFGKMAEKGYIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WSPSS +ALAEAE+EY +   S SIY  F +  A             D    +W
Sbjct: 179 GLKPVYWSPSSESALAEAEIEYKDIK-SPSIYVSFAIKDAKGVVPA-------DAKFVIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  +++N +  Y VV           A ANKK               I+A 
Sbjct: 231 TTTPWTLPANLGISLNPEFVYVVV-----------AVANKK--------------FIIAK 265

Query: 403 DLVPTLEA--KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           DL+ T+    +W    V+++ + G  L+     HP  +R   V++ G+++T ++GTG VH
Sbjct: 266 DLLETVATALEWEAYEVVQE-VKGEVLDRIVAQHPFYDRDSLVMV-GEHVTADAGTGCVH 323

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHG++DY  S +YGL ILSP+D+ G +T+EA  F G+    D N  V + L E  +L
Sbjct: 324 TAPGHGEDDYHISKQYGLDILSPLDNSGCYTDEAPGFEGV-FYNDANKLVTEKLKEVDAL 382

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                  H YP+DWRTKKP I+RAT QWFASVE FR   ++A+    + P
Sbjct: 383 ESLGFISHSYPHDWRTKKPVIYRATPQWFASVEAFRGELLEAVKATAFTP 432



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 69/177 (38%), Positives = 119/177 (67%), Gaps = 1/177 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           +P +    YGAD+LRLWV+SVDYT DV I   +L+Q+S++YRK+R T R+L GN+ D+  
Sbjct: 602 IPQKVMDQYGADILRLWVASVDYTADVRISMDMLKQVSEVYRKIRNTFRFLHGNITDFDP 661

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + ++Y +L  +DQY   +L++++K +R +Y  Y F  ++ ++  F+ V+LS+FY D+A
Sbjct: 662 TKDRVAYAELREMDQYVYMRLQDVLKTVRAAYNRYDFAAVYHVVNNFVAVELSSFYLDIA 721

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGS 744
           KD +Y  G+ +  RR+ QTV+   L+++V+++ PI+PH  +++W  L     +E+ S
Sbjct: 722 KDVVYIEGSDNKDRRAMQTVIYDTLMTLVKIMTPIIPHTTDEMWSYLHAQGIVEEAS 778


>gi|365851168|ref|ZP_09391609.1| isoleucine--tRNA ligase [Lactobacillus parafarraginis F0439]
 gi|363717367|gb|EHM00745.1| isoleucine--tRNA ligase [Lactobacillus parafarraginis F0439]
          Length = 960

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 200/469 (42%), Positives = 287/469 (61%), Gaps = 36/469 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V+E E  K W++++V+ +    N+G+  FVLHDGPPYANG
Sbjct: 27  RVKDTLNLGKTKFKMRGNLPVKEVERQKAWEENRVYEQRQKLNEGKPTFVLHDGPPYANG 86

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++HMGHALNKI KDII RYK +  Y+  YVPGWD HGLPIE K+ Q+  +  +K ++ + 
Sbjct: 87  DIHMGHALNKISKDIIVRYKSMTGYRAPYVPGWDTHGLPIEQKLTQAGYD--RKKMSTND 144

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A   V+ QM  FKR GV  DW++PYLTL  ++EAA++ VFG  + +G IY+G
Sbjct: 145 FRKLCQEYAMKQVQRQMTEFKRLGVAGDWDHPYLTLQHQFEAAEVRVFGAFAKRGLIYKG 204

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+WS SS +ALAEAE+EY +     + Y   +++       G+ ++   +  + VWT
Sbjct: 205 KKPVYWSWSSESALAEAEVEYHDVTSPTAFYGE-KVIDG----KGVFDD--QNTYMVVWT 257

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+  + V+A   YAV++ +                      D  + F +VAS+
Sbjct: 258 TTPWTIPASEGITVDAGFDYAVIQPE----------------------DDDRQF-VVASE 294

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV  +    G   + + KT+ G+D+E     HP D+ +  + + GD++  E GTGLVHTA
Sbjct: 295 LVSKVSELVGWKNVKVVKTVKGADMEGVLAEHPFDHNRKLLTMLGDFVDLEEGTGLVHTA 354

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG+G++DY    KYGL I +PVD++G  T+EAG  F+G+    D N   +  L     L+
Sbjct: 355 PGYGEDDYNVGRKYGLDIFAPVDNKGYLTKEAGPDFAGV-FYDDANKIALDKLKAAGLLL 413

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              P +H YP+DWRTKKP IFRAT QWFASV+  +   ++AI  VK+ P
Sbjct: 414 HYMPLKHSYPFDWRTKKPIIFRATPQWFASVDKIKDDILNAIEDVKFYP 462



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 99/158 (62%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+SVD + DV +      ++SD Y+K+R T+R+LL N  D+    NS+ +D+
Sbjct: 642 GAEIVRLWVTSVDTSADVRVSMDNFAKISDSYKKIRNTMRFLLANTTDFDPQTNSVPFDE 701

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +   DQY    L   +K  R++YE+Y F  +++ +  F+  DLS FY D+AKD +Y    
Sbjct: 702 MDSQDQYMTVLLNKFLKEARDAYENYDFLTLYKKLLGFVTSDLSAFYLDMAKDIVYIDRA 761

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
               RRS QTV+   + ++ +++ P+LPH AE++W+ L
Sbjct: 762 DGHARRSMQTVMYNVVTTLTKLMTPVLPHTAEEIWEFL 799


>gi|223939734|ref|ZP_03631606.1| isoleucyl-tRNA synthetase [bacterium Ellin514]
 gi|223891605|gb|EEF58094.1| isoleucyl-tRNA synthetase [bacterium Ellin514]
          Length = 942

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 201/535 (37%), Positives = 294/535 (54%), Gaps = 70/535 (13%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRV-ADKNDGENFVLHDGPPYANGN 164
           YK+T++LP+T F M+A+ + REP+  + W  + ++ ++ A +   E FVLHDGPP+ANG+
Sbjct: 3   YKNTLNLPQTDFPMKADLVTREPQRLEQWQANGLYEKIQAQRAGAEKFVLHDGPPFANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G ALNKILKDII +Y+ L+     YVPGWDCHGLPIE KV Q + +        + +
Sbjct: 63  VHIGTALNKILKDIIIKYQTLRGKSAPYVPGWDCHGLPIEFKVSQEMRKAGDTAADAATI 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A+  +  Q   FKR GV  DW+NPYLTL+ EYEA ++ +F  +  +G++YRGK
Sbjct: 123 RKACEAYARKYIDLQRVQFKRLGVLGDWDNPYLTLNKEYEADELRMFADIVEKGFVYRGK 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WS   RTALAEAE+EY + HVS+S Y  F +V  P +             + +WTT
Sbjct: 183 KPVYWSIPCRTALAEAEVEYHD-HVSQSTYVKFPIVGRPNTY------------ILIWTT 229

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN AVA N+   Y+ V +     GD                       ++++ L
Sbjct: 230 TPWTLPANLAVAYNSTFSYSHVRV-----GDET--------------------YVLSTML 264

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           +PT+  K G     I ++L G  L+   Y HP  NR   +  G +++    GTG VH AP
Sbjct: 265 LPTVSEKCGWAGYEIIRSLTGEHLKEVEYQHPFCNRTGKLFAGDNFVENSVGTGFVHIAP 324

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEG---------KFTEEAGKFSGLDVL-----GDGNVA 509
           GHG +DY    + GLPI SPVDD+G         +  +   +  G  +L      D N A
Sbjct: 325 GHGLDDYNLGRQNGLPIYSPVDDDGCLAYTNDLPREQQMPAEMVGKSILEKHGKSDANEA 384

Query: 510 VVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVK 567
           V+  L  + +L+ +E Y H YP+ WR+K   IFRA +QWF S++   FR  A+D+I  VK
Sbjct: 385 VLHELRLRKALLHQENYHHSYPFCWRSKTAIIFRAMDQWFISIDHNKFRDQALDSINHVK 444

Query: 568 WVPP----------QEAPGYGADVLRLWVSSV----DYTGDVMIGPQVLRQMSDI 608
           WVP           +  P +     R W   +    D  G+ ++  +++R  +D+
Sbjct: 445 WVPDWGKNRIEGAVKSRPDWCISRQRTWGVPIPAFYDAQGNAILDAKIVRNAADL 499



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 107/177 (60%), Gaps = 5/177 (2%)

Query: 564 GQVKWVPPQEAPGY----GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYL 619
           GQ  +  PQ A  Y    GADV+RLWV+S DY  D+++  + + ++S+ YR +R TLRY 
Sbjct: 624 GQGGYEKPQTAEAYVKKYGADVVRLWVASQDYRNDIVVSEERVNKVSETYRGIRNTLRYQ 683

Query: 620 LGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVD 678
           L NL+D+    ++++ D L  +D++ L +   + K +  +Y +Y+F  ++Q + +F+ V+
Sbjct: 684 LSNLYDFDPAKHTVADDKLTGLDRWILGEFSKLEKEVLAAYANYEFHVVYQKVSQFVAVE 743

Query: 679 LSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           LS+ Y DV KDRLYT    S  RRS QT L   +  +  ++AP+L    ++ W+ +P
Sbjct: 744 LSSIYHDVVKDRLYTDAANSQRRRSTQTALYRLVTGLSHILAPMLVFTTDEAWEFIP 800


>gi|430742258|ref|YP_007201387.1| isoleucyl-tRNA synthetase [Singulisphaera acidiphila DSM 18658]
 gi|430013978|gb|AGA25692.1| isoleucyl-tRNA synthetase [Singulisphaera acidiphila DSM 18658]
          Length = 956

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 205/470 (43%), Positives = 266/470 (56%), Gaps = 33/470 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T++LP T F M+AN  VREP+I + W +  ++ ++     G E  VLHDGPPYANG 
Sbjct: 8   YKETLNLPVTRFEMKANLTVREPQIQQRWREADLYGQIRQARAGSERKVLHDGPPYANGE 67

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGH LNK+LKDI+ R   +Q +   YVPGWDCHGLPIE KV++ L   A   ++ +++
Sbjct: 68  IHMGHLLNKVLKDIVVRSLTMQGFDSPYVPGWDCHGLPIEHKVVKDLGSKAAT-MSLAEI 126

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R      A   V  Q   F+R GV  DW+NPYLTLDP YEA  ++V   +   GY++R  
Sbjct: 127 RTLCQADALKWVDLQRDQFRRLGVSGDWDNPYLTLDPRYEAGILDVLADLLAGGYVFRQL 186

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KP+HW  + RTALAEAELEY +   S SIY  F +VS  P+  G            VWTT
Sbjct: 187 KPIHWCMNDRTALAEAELEYRD-ESSPSIYVNFPIVSGVPAAWG-----TGPWHAMVWTT 240

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+A +  L Y  V       G                   + +  I+A+DL
Sbjct: 241 TPWTLPANVAIAAHPDLNYVGVRYVDPESG-------------------QALQTILAADL 281

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           +P + A  G T++       G DLE+ +Y HP   R  P+V+   Y+T E GTGLVHTAP
Sbjct: 282 LPKVMALRGVTEIQELGRCRGKDLEHAQYRHPFIERTSPIVL-AQYVTVEDGTGLVHTAP 340

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-GKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           GHG EDY T   Y LP LSPVD  G+FT+EA     G  V    N  ++  L E+  L  
Sbjct: 341 GHGTEDYQTGRTYQLPTLSPVDGSGRFTDEAPAALVGKGVF-KANPEIIALLRERGYLYH 399

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           E  + H YP+ WR KKP IFRATEQWF  V+    R   +  I  V+W+P
Sbjct: 400 EFSFVHSYPHCWRCKKPVIFRATEQWFIGVDRNDLRARTLKEIDSVRWLP 449



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/161 (42%), Positives = 111/161 (68%), Gaps = 2/161 (1%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGN--SISY 634
           YGADVLRL+V+S+DY  D+ +  + +++MS+ YRK+R T RY+LGNL D+   +  S+  
Sbjct: 629 YGADVLRLYVASMDYADDIRMSEKGIKEMSEAYRKIRNTFRYMLGNLEDYASFDPASVPS 688

Query: 635 DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTG 694
           + L  ID++AL QL+ +  +++ +YE ++F+++FQ I +F  V+LS+FY DV KDRLY  
Sbjct: 689 ESLHEIDRWALRQLDEVASDVKGAYERFEFYRVFQRIYQFCSVELSSFYLDVLKDRLYAE 748

Query: 695 GTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
                 RR+ Q VL+     + R++AP++PH AE++W+ +P
Sbjct: 749 LPQGPDRRAAQFVLAKLHDVLTRLLAPLVPHTAEELWELIP 789


>gi|388853980|emb|CCF52324.1| probable ISM1-isoleucine-tRNA ligase, mitochondrial [Ustilago
           hordei]
          Length = 1096

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 207/518 (39%), Positives = 300/518 (57%), Gaps = 51/518 (9%)

Query: 93  KKAAEGEKKEEGR----YKHTVDLPKTTFGMRANALVREPEIHKLWD----DHQVFLRVA 144
           KK  +GE  +  +    + HT+ LP T F +RA+A  R+   H  +D    +   + R  
Sbjct: 68  KKQTKGESNQSDKVSKEFSHTLQLPNTPFSIRASAAQRD---HLFYDRTCGELYRWQRSR 124

Query: 145 DKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIE 204
               G +FV HDGPPYANGNLH GHALNKILKDI NRY++L+  +V Y+PGWDCHGLPIE
Sbjct: 125 TSTSG-DFVFHDGPPYANGNLHCGHALNKILKDITNRYQVLRGKRVHYMPGWDCHGLPIE 183

Query: 205 LKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNN--PYLTLDPE 262
            K L ++  D +  L    +R +A   A   ++ Q + F ++G+ ADW+N   Y TLDP 
Sbjct: 184 AKALANVKPDKRHKLVAHDIRERARNEAIKAIETQKSEFGQFGIMADWSNDATYRTLDPA 243

Query: 263 YEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSA 322
           YEA Q+ VFG+M  +G IYR  +PV+WSPS+RTALAE+ELEY E H+S+++Y  F+M++ 
Sbjct: 244 YEARQLRVFGEMVRKGLIYRQYRPVYWSPSNRTALAESELEYREDHLSKAVYVAFKMIAG 303

Query: 323 PP--STSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPA 380
           P      G   +F   L L +WTTTPW++P+N AV VN  L+Y++V  ++  EG      
Sbjct: 304 PELLQKLGQDADFDHRLNLIIWTTTPWSLPSNMAVNVNPGLEYSIVR-RAGREGPYYVVG 362

Query: 381 NKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKT--LAGSDLENCRYVHPV-- 436
             +     VL        IV  +     + K  T   +++   + GSDL +  Y  P+  
Sbjct: 363 TDRIEALQVLPSS-----IVVGERDAEGDGKGPTFGPLEEVARVRGSDLTDSTYRTPLSA 417

Query: 437 -DNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL----PILSPVDDEGKFT 491
            D++  P+++  DY+T  SGTGLVH+AP HG EDY    + G      I SPV+DEG+++
Sbjct: 418 SDSKPRPILM-ADYVTAVSGTGLVHSAPAHGAEDYQIWKQQGHIHRDGIFSPVNDEGRYS 476

Query: 492 EE---------AG----------KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPY 532
            +         AG          +  G +V+ +G   V   L E+ +LI  +   HKYPY
Sbjct: 477 SDILQLDAASSAGSSEDDTKLGQRLLGKEVISEGAKEVTAILQERGALISAQTLRHKYPY 536

Query: 533 DWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           DWR+K+P I RAT QWFA+++  ++ A++A+  V +VP
Sbjct: 537 DWRSKQPVIVRATAQWFANLDRIKEQAIEALQDVTFVP 574



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 2/191 (1%)

Query: 573 EAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSI 632
           + P YG DVLRLWV+  DYT D  IG  ++ + ++  RKLR T R++L NL        +
Sbjct: 771 DQPAYGVDVLRLWVARSDYTTDPPIGNVIISKTAETLRKLRNTARFMLANLPASDKVAKL 830

Query: 633 SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLY 692
               + ++D++ + +L  + +    +YE Y F ++ + +  F    LSN Y DV KD LY
Sbjct: 831 DKAKMNLLDRFVMQELYQLERACAAAYEVYDFAQVVRRLTEFTNATLSNLYLDVGKDSLY 890

Query: 693 TGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV--WQNLPFAYTLEDGSAAEFVF 750
              + +  R+    V+   L ++  ++API P L E++  ++N   +  +E    AE VF
Sbjct: 891 LDESANERRQMIVAVVDQILRTMTGIMAPITPFLCEEIFHFRNGASSDPVEGVKGAESVF 950

Query: 751 ESKWPVLDEKW 761
            + WP +DE W
Sbjct: 951 INGWPSVDETW 961


>gi|210633886|ref|ZP_03297901.1| hypothetical protein COLSTE_01818 [Collinsella stercoris DSM 13279]
 gi|210159055|gb|EEA90026.1| isoleucine--tRNA ligase [Collinsella stercoris DSM 13279]
          Length = 933

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 201/486 (41%), Positives = 275/486 (56%), Gaps = 36/486 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T++LPKT F MRA    REPE  K W  + V+  +  KN+G + FVLHDGPPYANG 
Sbjct: 5   YKQTMNLPKTKFPMRAALAQREPERLKRWQQNHVYELMLKKNEGHKKFVLHDGPPYANGP 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKI KDIINRYK +Q ++  YVPGWDCHG PIE KV + L  +   +   +K+
Sbjct: 65  IHLGHAMNKISKDIINRYKAMQGFETPYVPGWDCHGQPIEHKVEEKLGTEKFNNTPVAKI 124

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    +FA   +  Q   FKR GV  DW+NPYLTL  +++AA IEVF  M  +G +YRG 
Sbjct: 125 RELCNEFAVENIDLQREGFKRLGVLGDWDNPYLTLYHQHDAADIEVFKAMFDKGMVYRGH 184

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPVHW     TALAEAE+EY +   S SIY  F + S P      L  F   +   +WTT
Sbjct: 185 KPVHWCKHCHTALAEAEIEYGD-ETSPSIYVRFELTSKPAG----LESFDGPVDFVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKD-QKKVFIIVASD 403
           TPWT+P++ AV++  +  Y  +E                 R   +LKD  +KV  I   D
Sbjct: 240 TPWTIPSDQAVSLKPEAVYTAIE--------------HDGRAEIMLKDLAEKVCGIAGWD 285

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + P + A  G    +   +    L++  Y  PV +    V +  DY+ TE GTG+VH +P
Sbjct: 286 VTPVMVA--GKPYEVPAEV----LDHLHYKQPVFDGVEGVALLADYVGTEDGTGIVHNSP 339

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTE-----EAGKFSGLDVLGDGNVAVVKYLDEQM 518
           GHG +DY   +K G+ +  PVDD+G+F         G FSG+D   + N  ++++L ++ 
Sbjct: 340 GHGVDDYYVCMKEGMDVCMPVDDDGRFYNGDEFGTGGPFSGMDT-DEANPHIIQFLRDRG 398

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVPPQEAP 575
            L+ E    H YP+ WR K P +FRAT+QWF S++  G R+ A+D +   V W P     
Sbjct: 399 MLVAEVKITHSYPHCWRCKHPVLFRATDQWFVSMDKTGLREQALDQVRNHVAWYPGHAVN 458

Query: 576 GYGADV 581
             GA V
Sbjct: 459 RIGAMV 464



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 93/160 (58%), Gaps = 2/160 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW--RVGNSISYD 635
           GAD++RLWV+S+D + DV    ++L + SD YR+ R TLR+LL  L        + +++D
Sbjct: 634 GADIVRLWVASIDTSTDVACDTEILARTSDAYRRFRNTLRFLLSVLEGQFEPATDGVAFD 693

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  +D+  L +L  +   +  +YE ++F + ++ +  F++ +LSN Y D  KDRLY   
Sbjct: 694 ELMPLDKLMLARLTQVQAEVDAAYEGFEFNRAYRTLYDFVVTELSNVYLDALKDRLYCEK 753

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
             S   RS QTV++  L  ++R + PIL +  ++  +  P
Sbjct: 754 PGSHEMRSAQTVVAELLSMLMRDLQPILAYTVDEAMEFAP 793


>gi|387813165|ref|YP_005428646.1| isoleucine tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
           49840]
 gi|381338176|emb|CCG94223.1| isoleucine tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
           49840]
          Length = 939

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 194/471 (41%), Positives = 285/471 (60%), Gaps = 32/471 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YKHT++LP+T F MR N   REP++ K W D  V+  +  +  G E F+LHDGPPYANG+
Sbjct: 4   YKHTLNLPETAFPMRGNLAKREPDMLKHWQDLNVYGNLRKQRQGREKFILHDGPPYANGS 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKD+I + +    Y   YVPGWDCHGLPIE KV Q + +   K +     
Sbjct: 64  IHIGHAVNKILKDMIVKSRSFMGYDAPYVPGWDCHGLPIEHKVEQEIGKAGVK-VDYKTF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A   ++ Q A F R GV  +W+ PYLT+DP+ EA  +   G++  +G++ RG 
Sbjct: 123 RQACRDYATKQIEGQKADFIRLGVMGEWDKPYLTMDPKVEAGIVRALGKIVAKGHLVRGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMV--SAPPSTSGLLNEFLPDLGLAVW 342
           KPV+WS   ++ALAEAE+EY +   S  I   F +V   A   T G  +E   D+ L +W
Sbjct: 183 KPVYWSVVGQSALAEAEVEYQD-KTSTQIDVRFTVVDQDAVLKTFG-TSEGEGDVSLVIW 240

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN AV++ A ++YA+V++      D    A +               +I+A+
Sbjct: 241 TTTPWTIPANQAVSIGADIEYALVQL------DVGHGAER---------------MILAT 279

Query: 403 DLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           D+V  + A+WG +   +   ++GS LEN    HPV ++Q PV++ GD+++ ++GTG VHT
Sbjct: 280 DMVQGIMARWGVEDYKVLANVSGSALENQLLQHPVYDKQVPVLL-GDHVSLDAGTGAVHT 338

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG ED+V   +YG+  L+ V  +G +T+ AG+F+G+ V    +  V   L+ +  L+
Sbjct: 339 APDHGMEDFVVGKEYGIGTLNLVKADGTYTDAAGEFAGVHVY-KADEPVCAALEREGKLV 397

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E + H YP+ WRTK P I+RAT QWF S++    R  A++AI  V+WVP
Sbjct: 398 RSEKFRHSYPHCWRTKTPLIYRATPQWFISMDKLNLRADALEAIKGVRWVP 448



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 107/188 (56%), Gaps = 9/188 (4%)

Query: 569 VPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 627
           + PQE     GAD+LRLWVS+ DY+G++ +   +LRQ +D YR++R T R+LL NL  + 
Sbjct: 614 IAPQEVMNELGADILRLWVSATDYSGEMSVSKDILRQTADGYRRIRNTARFLLSNLTGFD 673

Query: 628 VG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
              + ++ +D+  +D++ + +   +   + E Y +Y F +I+Q +  F    L  FY D+
Sbjct: 674 PDQHMVAPEDMIALDRWMVDRALQLQNELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDI 733

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 746
            KDR YT    S  RRSCQT L     ++VR IAPIL   A+++WQ+LP       G   
Sbjct: 734 IKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADEIWQHLP-------GKRG 786

Query: 747 EFVFESKW 754
           + VF   W
Sbjct: 787 DTVFYETW 794


>gi|346314199|ref|ZP_08855720.1| isoleucyl-tRNA synthetase [Erysipelotrichaceae bacterium 2_2_44A]
 gi|345906557|gb|EGX76281.1| isoleucyl-tRNA synthetase [Erysipelotrichaceae bacterium 2_2_44A]
          Length = 910

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 200/470 (42%), Positives = 273/470 (58%), Gaps = 42/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANG 163
            YK T+ +PKT F MR     +EP   K W + +++ ++ +  +G E FVLHDGPPYANG
Sbjct: 2   EYKDTLLMPKTRFEMRGKLPTKEPNFQKRWKESEIYEKMLENREGCEAFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++H+GHALNKILKD+I R + +  YKV YVPGWD HGLPIE   +Q L  + +K++  S 
Sbjct: 62  DIHLGHALNKILKDVIVRNRYMAGYKVPYVPGWDTHGLPIE-TAIQKLGHN-RKEMELSD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   V  Q   F   GV  D+++PY+TL  ++EA QIE+F  M++ G IY+G
Sbjct: 120 FRKLCYDYALEQVDRQKKGFLSLGVVGDYDHPYITLTKDFEAHQIEIFASMAMDGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS TALAEAE+EY +   S +I+  F    A     G+L+    D    +WT
Sbjct: 180 LKPVYWSPSSETALAEAEIEYKDIK-SPTIFVKF----AVKDGKGVLD---SDTSFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + +N    YA+VE                          +K  +IV  +
Sbjct: 232 TTPWTIPANLGICLNKDYTYALVE-------------------------SEKGKLIVLEE 266

Query: 404 LVPTLEAKWGTKLVIKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           LV  L  K+G  L  KK LA   GS+LE     HP+ +R+  +VI GD++T ++GTG VH
Sbjct: 267 LVDALWEKFG--LETKKKLATYKGSELEMITCQHPLYDRE-SLVILGDHVTADAGTGCVH 323

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPG G +D+    KYGLP    VD+ G   E+AG +     + D N  V + LD   +L
Sbjct: 324 TAPGFGADDFFIGQKYGLPAYCNVDEHGCMMEDAGDWLKGQYVDDANKTVTQRLDAMGAL 383

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +  E   H YP+DWRTKKP IFRAT QWFAS++  R+  +  I  V W+P
Sbjct: 384 LKLEFITHSYPHDWRTKKPIIFRATTQWFASIDKIREKLLTEIANVDWIP 433



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 98/165 (59%), Gaps = 8/165 (4%)

Query: 574 APG-----YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH---D 625
           APG     YGAD+LRLW +SVDY  D  +  ++L+Q+S+ YRK+R T R++L N++   D
Sbjct: 603 APGEITKKYGADILRLWATSVDYQADCSMSDEILKQISEQYRKVRNTFRFMLANVNPEED 662

Query: 626 WRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFD 685
           +   + +  ++LP +D+Y L  L  + +   ++Y+ Y+F  I  ++   +  +LS +Y D
Sbjct: 663 FTKEDLVDINELPELDKYILVLLNEVNEKAMKAYKEYRFADITNMLSNLMTNELSAYYMD 722

Query: 686 VAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
             KD LY     +  RR  QTVL   + ++VR+ APIL H  E+V
Sbjct: 723 YTKDILYIEKKDAPRRRQVQTVLWHAVNTLVRLWAPILVHTCEEV 767


>gi|317051698|ref|YP_004112814.1| isoleucyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946782|gb|ADU66258.1| isoleucyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 925

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 200/471 (42%), Positives = 275/471 (58%), Gaps = 39/471 (8%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGNL 165
           K T++LP T F MR N   REP+  + W    ++  +     G++ FVLHDGPPYANG+L
Sbjct: 4   KDTLNLPVTDFPMRGNLPQREPQFLEKWKQEDIYSAIQQSRQGKSLFVLHDGPPYANGHL 63

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKDII + K +Q ++  YVPGWDCHGLPIEL V ++L +D K   T    R
Sbjct: 64  HIGHALNKILKDIIIKQKSMQGFQAPYVPGWDCHGLPIELGVDKALGKD-KHTTTAVDKR 122

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
               + A   ++ Q   F+R+GV+  W+ PYLT+D  YEA  +   G    +G +YRG K
Sbjct: 123 QLCREHAARYIEIQREEFQRFGVFGAWDEPYLTMDFAYEADIVRELGSFMAKGSLYRGLK 182

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL--PDLGLAVWT 343
           P++W     TALAEAE+EY + H S S+Y  F +VSA     G++ E     D+ + +WT
Sbjct: 183 PIYWCCDCVTALAEAEVEYHD-HTSDSVYVAFPVVSA---LGGIIPELQGKTDVSIVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN AV +N +L+Y+ VE                           +  +IVAS 
Sbjct: 239 TTPWTLPANLAVCLNPELEYSAVET-------------------------SRGILIVASQ 273

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ +L   +G  +  I  T  G+ LEN    HP   R   +VI GD++TTE+GTG VHTA
Sbjct: 274 LLGSLMQIFGFDEFSILATFPGAVLENSVCGHPFIERD-SMVIMGDHVTTEAGTGAVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG EDY+  LKYGL   +PVD+ G F  E   F G+ +    N A+++++ +  SL+ 
Sbjct: 333 PGHGMEDYIVGLKYGLEPYNPVDNHGVFRAEVPHFGGMHI-NKANPAIIEHMKQSGSLLA 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIG-QVKWVP 570
               EH YP+ WR KKP I+RAT QWF S+E    R+ ++  I  +V WVP
Sbjct: 392 GSRIEHSYPHCWRCKKPVIYRATPQWFISMEHNDLREKSLQQIKEEVTWVP 442



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 102/159 (64%), Gaps = 1/159 (0%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           YGAD+LRLWV++ DY  D+ I  +++ ++++ YR++R T RY+LGNL+D+  + ++I Y 
Sbjct: 621 YGADILRLWVAAEDYRDDLRISDEIINRLAESYRRIRNTARYMLGNLYDFNPLTDAILYG 680

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+   D+YAL +     K + ++YE+Y+F  I+     F  VD+S  Y D+ KDRLY   
Sbjct: 681 DMLEFDRYALARYHAFEKRVLDAYENYEFHVIYHACNNFCSVDMSAQYLDIIKDRLYAED 740

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
              F RRS Q+ L   L  ++R++AP+L    E+V+Q+L
Sbjct: 741 ADGFKRRSAQSALHLILSGMMRLLAPVLSFTMEEVYQHL 779


>gi|116494771|ref|YP_806505.1| isoleucyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|122263811|sp|Q039Q9.1|SYI_LACC3 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|116104921|gb|ABJ70063.1| Isoleucyl-tRNA synthetase [Lactobacillus casei ATCC 334]
          Length = 928

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 196/469 (41%), Positives = 281/469 (59%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T+++ KT+F MRA     E    K WD+  V+ +    N+G+  F+LHDGPP+ANG
Sbjct: 2   KIKDTLNMGKTSFPMRAGLPKNESIWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+HMGHALNKI KDII RYK +  ++  YVPGWD HGLPIE ++ +   +  +K+++ + 
Sbjct: 62  NIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVK--RKEMSMTD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    +FA   +  Q   FKR GV  DW +PY+TL   YEA++I VFG M+ +GYIY G
Sbjct: 120 YRELCRQFAMQEIDKQRTDFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS + LAEAE+EY +   S SIY  F++V       GLL+    D  L +WT
Sbjct: 180 LKPVYWSWSSESTLAEAEIEYHDDK-SPSIYVAFKVVDG----KGLLDT---DTYLVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + VN +  Y  V++            +KK               +VA++
Sbjct: 232 TTPWTIPANYGITVNPRFDYVQVQV-----------GDKK--------------YVVAAE 266

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+  +  E  W    ++ KT  G+D++     HP+ +R   +V+  D++T ++GTGLVHT
Sbjct: 267 LLDRVAEEIGWENPKIL-KTFKGTDMDKMTAQHPLYDRTS-LVMNADHVTLDAGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY   +KYGLP++S VD +G   E A  F G+    D N  + + L ++ +L+
Sbjct: 325 APGHGEDDYKVGVKYGLPVVSVVDAKGYMNEYAPGFEGV-FYDDANKQITQALADKGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + + H YP+DWRTKKP IFRAT QWFAS++ FR   + AI  V + P
Sbjct: 384 KLDFFTHSYPHDWRTKKPVIFRATTQWFASIDAFRDQILKAIDTVDFKP 432



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 119/194 (61%), Gaps = 5/194 (2%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           VP      +GA+++RLWV++VD + DV +      Q S+ YRK+R T+R+++ N  D+  
Sbjct: 603 VPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDP 662

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++++YD+L  +D+Y + +L  I+K ++ +Y++Y F  + + I  F++ DLS FY DVA
Sbjct: 663 EKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL--PFAY-TLEDGS 744
           KD +Y        RR  QTV+ A LL++ ++I PILPH AE+VW  L  P AY  L D  
Sbjct: 723 KDVVYIEAKDDPKRRGMQTVMFAALLALTKLITPILPHTAEEVWPYLKQPEAYAALADMP 782

Query: 745 AAEFVFESKWPVLD 758
            AE  F+ +  +LD
Sbjct: 783 EAE-QFDDESQLLD 795


>gi|340517198|gb|EGR47443.1| hypothetical protein TRIREDRAFT_63935 [Trichoderma reesei QM6a]
          Length = 952

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 198/473 (41%), Positives = 276/473 (58%), Gaps = 40/473 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +K T+ LP++TF  R N   ++  +    D    + + +++     FVLHDGPPYANG L
Sbjct: 5   WKATLRLPRSTFPARPNPKQQQQLLRDCTDSFYQW-QTSNRPRENPFVLHDGPPYANGPL 63

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H GHA+NK LKDIINR ++    +V Y P WDCHGLPIE+K   +L E   K L+P K+R
Sbjct: 64  HAGHAINKTLKDIINRTQVQAGRRVMYRPSWDCHGLPIEMK---ALGESGTKGLSPPKIR 120

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
             A + A  T+  QM  FK + V A+W+N + T+D  +E  Q+ VF +M   G IYR  K
Sbjct: 121 ESARRLASKTILDQMKGFKSFAVMAEWDNKWTTMDRAFEIRQLRVFQKMVRSGLIYRKHK 180

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PV+WSPSSRTALAEAELEY + HVS + Y  F ++S   S  G LNEF   L  A+WTTT
Sbjct: 181 PVYWSPSSRTALAEAELEYRDDHVSTAAYVRFPVMSDWSSVPG-LNEFKGRLYAAIWTTT 239

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN A+A++ +L YAV+++     GD                      ++VA   V
Sbjct: 240 PWTLPANKAIAMHDELDYAVLQV-----GDDG--------------------LLVAESRV 274

Query: 406 PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPV--VIGGDYITTESGTGLVHTAP 463
             L+    +  VI K++ GS L+   Y + +      +  ++  D+++ +SGTGLVH AP
Sbjct: 275 EVLQKNMPSAAVIAKSIPGSQLKGLMYRNKLRGSSSSLQPIVHADFVSADSGTGLVHMAP 334

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEA------GKFSGLDVLGDGNVAVVKYLDEQ 517
           GHGQEDY     +G+   +P+ DEG FT EA         S   +L  G+ AV+  + E 
Sbjct: 335 GHGQEDYQACSAFGIEAFAPITDEGHFTAEAYPDDPEKLTSAPSILEGGSQAVLDLVGE- 393

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             ++     EHKYPYDWRTKKP + RAT QWFA VE  ++ A+ A+ +V++VP
Sbjct: 394 -DVLWTHKLEHKYPYDWRTKKPVVIRATAQWFADVESIKEDALQALSKVRFVP 445



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 102/191 (53%), Gaps = 23/191 (12%)

Query: 563 IGQVKWVPPQEAPG---------YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLR 613
           I + K +PP +  G          GAD +RLW +S D+T D+++G  +L+ + +   K R
Sbjct: 618 IMEGKLLPPLKTKGNDTTKRFDALGADAMRLWAASSDFTSDILVGASILQPIHNALIKYR 677

Query: 614 GTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQR 673
            TL+ LLG+LH      S     L  +DQ A+ QL++++  + E+Y +Y+F K   +I R
Sbjct: 678 TTLKMLLGSLH-----QSALQAPLTKLDQIAILQLQDVMAQVWEAYGNYEFHKATGLINR 732

Query: 674 FIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQN 733
           +I  DLS FY +  KDRLY G            VL   L   +R++API P L E+ W +
Sbjct: 733 WIATDLSAFYLEALKDRLYCGDGGG--------VLVPILYGFLRMLAPITPMLVEEAWSH 784

Query: 734 LPFAYTLEDGS 744
            P ++  ED S
Sbjct: 785 RP-SWMAEDAS 794


>gi|302391662|ref|YP_003827482.1| isoleucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203739|gb|ADL12417.1| Isoleucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 927

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 202/467 (43%), Positives = 281/467 (60%), Gaps = 33/467 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T++LP+T F MRAN   RE E  + W++++++       +G E F+LHDGPPYANG+
Sbjct: 3   YKETLNLPETEFQMRANLSEREEEFQEYWEENEIYDEALKNREGAEKFILHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALN++LKDI+ RYK LQ Y+  Y+PGWD HGLPIE ++ + L  D  ++L+ ++L
Sbjct: 63  IHIGHALNQVLKDILTRYKTLQGYQSPYIPGWDTHGLPIEHQITKELG-DKIEELSTAEL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +   +A   +  Q   FKR G W +W+NPY+TLDPEYEA QIEVFG++   GY+ +G 
Sbjct: 122 REECKNYALKYIDRQREQFKRLGAWGEWDNPYVTLDPEYEAKQIEVFGEIIKNGYLSKGM 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+W P   TALAEAE+EY E     SIY  F +      T G       D  + +WTT
Sbjct: 182 KPVYWCPHCNTALAEAEVEYEEARAP-SIYVKFPVQEG--ITVGDTELTAEDSYVVIWTT 238

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+    Y V E     EGD                      ++VA +L
Sbjct: 239 TPWTIPSNMAITVHPDFDYVVAE----AEGD---------------------LLVVAKEL 273

Query: 405 VPTLEAKWGT-KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  +    G  +  I + + G  LE     HP  +R+ P++  GD++T E GTG VHTAP
Sbjct: 274 VDEMMEIVGIDEYEIVEEIEGDALEGLVTTHPFFDRESPIIF-GDHVTLEQGTGCVHTAP 332

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG EDYV  ++Y LP+ +P+D++G FTEEAG F+G+    D N+ V   L++   L+  
Sbjct: 333 GHGHEDYVIGVEYDLPVFAPMDNDGVFTEEAGPFAGM-YYDDANIKVTDMLEDDDLLMNL 391

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +  +H YP  WR K P IFRATEQWFASV+  +  A++ I  V W P
Sbjct: 392 DFIDHSYPNCWRCKNPIIFRATEQWFASVDAIKDDALETIKDVDWYP 438



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 82/195 (42%), Positives = 128/195 (65%), Gaps = 7/195 (3%)

Query: 569 VPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 627
           V P E    YGAD+LRLWV+S D+  DV +  ++L+Q +++YR++R T RY+LGN+ ++ 
Sbjct: 609 VSPHEVIDQYGADILRLWVASSDFKEDVRVSDKILQQNAEVYRRIRNTFRYILGNMDNFD 668

Query: 628 -VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
            V N++ YD+L  ID++AL +L+ +V  I E+YE Y + K++  +  F   ++S+FY DV
Sbjct: 669 PVENTVEYDELLEIDKWALHKLQKLVDEITEAYEEYDYHKLYHKVHNFCATEMSSFYMDV 728

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 746
            KDRLYT  T S  RR+ QT +   L ++++V++P+L H AE+ WQ+LP     E G  A
Sbjct: 729 LKDRLYTSVTDSTKRRAAQTAMYEILTTLIKVLSPVLVHTAEEAWQHLP-----ESGKEA 783

Query: 747 EFVFESKWPVLDEKW 761
           E VF + WP + E +
Sbjct: 784 ESVFLTDWPEVKEDY 798


>gi|313901154|ref|ZP_07834642.1| isoleucine--tRNA ligase [Clostridium sp. HGF2]
 gi|422327525|ref|ZP_16408552.1| isoleucine-tRNA ligase [Erysipelotrichaceae bacterium 6_1_45]
 gi|312954112|gb|EFR35792.1| isoleucine--tRNA ligase [Clostridium sp. HGF2]
 gi|371663365|gb|EHO28555.1| isoleucine-tRNA ligase [Erysipelotrichaceae bacterium 6_1_45]
          Length = 908

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 200/470 (42%), Positives = 273/470 (58%), Gaps = 42/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANG 163
            YK T+ +PKT F MR     +EP   K W + +++ ++ +  +G E FVLHDGPPYANG
Sbjct: 2   EYKDTLLMPKTRFEMRGKLPTKEPNFQKRWKESEIYEKMLENREGCEAFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++H+GHALNKILKD+I R + +  YKV YVPGWD HGLPIE   +Q L  + +K++  S 
Sbjct: 62  DIHLGHALNKILKDVIIRNRYMAGYKVPYVPGWDTHGLPIE-TAIQKLGHN-RKEMELSD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   V  Q   F   GV  D+++PY+TL  ++EA QIE+F  M++ G IY+G
Sbjct: 120 FRKLCYDYALEQVDRQKKGFLSLGVVGDYDHPYITLTKDFEAHQIEIFASMAMDGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS TALAEAE+EY +   S +I+  F    A     G+L+    D    +WT
Sbjct: 180 LKPVYWSPSSETALAEAEIEYKDIK-SPTIFVKF----AVKDGKGVLD---SDTSFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + +N    YA+VE                          +K  +IV  +
Sbjct: 232 TTPWTIPANLGICLNKDYTYALVE-------------------------SEKGKLIVLEE 266

Query: 404 LVPTLEAKWGTKLVIKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           LV  L  K+G  L  KK LA   GS+LE     HP+ +R+  +VI GD++T ++GTG VH
Sbjct: 267 LVDALWEKFG--LETKKKLATYKGSELEMITCQHPLYDRE-SLVILGDHVTADAGTGCVH 323

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPG G +D+    KYGLP    VD+ G   E+AG +     + D N  V + LD   +L
Sbjct: 324 TAPGFGADDFFIGQKYGLPAYCNVDEHGCMMEDAGDWLKGQYVDDANKTVTQRLDAMGAL 383

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +  E   H YP+DWRTKKP IFRAT QWFAS++  R+  +  I  V W+P
Sbjct: 384 LKLEFITHSYPHDWRTKKPIIFRATTQWFASIDKIREKLLTEIANVDWIP 433



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 98/165 (59%), Gaps = 8/165 (4%)

Query: 574 APG-----YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH---D 625
           APG     YGAD+LRLW +SVDY  D  +  ++L+Q+S+ YRK+R T R++L N++   D
Sbjct: 603 APGEITKKYGADILRLWATSVDYQADCSMSDEILKQISEQYRKVRNTFRFMLANVNPEED 662

Query: 626 WRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFD 685
           +   + +  ++LP +D+Y L  L  + +   ++Y+ Y+F  I  ++   +  +LS +Y D
Sbjct: 663 FTKEDLVDINELPELDKYILVLLNEVNEKAMKAYKEYRFADITNMLSNLMTNELSAYYMD 722

Query: 686 VAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
             KD LY     +  RR  QTVL   + ++VR+ APIL H  E+V
Sbjct: 723 YTKDILYIEKKDAPRRRQVQTVLWHAVNTLVRLWAPILVHTCEEV 767


>gi|321265666|ref|XP_003197549.1| isoleucyl-tRNA synthetase, mitochondrial [Cryptococcus gattii
           WM276]
 gi|317464029|gb|ADV25762.1| Isoleucyl-tRNA synthetase, mitochondrial, putative [Cryptococcus
           gattii WM276]
          Length = 1003

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 215/573 (37%), Positives = 313/573 (54%), Gaps = 79/573 (13%)

Query: 79  SSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQ 138
           ++S  ++R     A  +A+G+KK    Y HT+ LPKT+F ++   +V   + ++     +
Sbjct: 27  AASILQARLATTKANDSAQGKKKA---YSHTLRLPKTSFPLKHKDVVAAEKRYRSRTCDE 83

Query: 139 VFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDC 198
           ++ +  + N    FVLHDGPPYANG+LHMGHALNK++KDIINRY +++  +V Y+PGWDC
Sbjct: 84  LYKQQYEGNPDSLFVLHDGPPYANGHLHMGHALNKVIKDIINRYNVIRGRRVHYIPGWDC 143

Query: 199 HGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWN---NP 255
           HGLPIE K L ++ +     LTP ++RA+A + A   +  Q    +  GV ADW+   N 
Sbjct: 144 HGLPIEQKALAAIGK-LHTSLTPDQVRAQARQVALDAIDIQKTEMRALGVMADWDSEKNT 202

Query: 256 YLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYA 315
           Y TLD ++E  Q+ +F  M  +G++    +PV++SPSSRTALAEAELEY +GH SRS+Y 
Sbjct: 203 YRTLDHDFEIRQLRLFQAMVQKGFVTHRLRPVYYSPSSRTALAEAELEYKDGHKSRSVY- 261

Query: 316 VFRMVSAP---PSTSGLLNEFLP--------DLGLAVWTTTPWTVPANAAVAVNAKLQYA 364
               VS P      SG L E           DL L +WTTTPW++P N+ VAV+  ++Y 
Sbjct: 262 ----VSLPVQEDGMSGALKEIYESINQEGRRDLSLVIWTTTPWSLPGNSGVAVHNDMEYV 317

Query: 365 VVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAG 424
           V                          +Q ++F++ A++    +E   G   V+ +  AG
Sbjct: 318 VAS-----------------------NEQGRLFVL-AAERKEAMEKMMGPLKVVGQLKAG 353

Query: 425 SDLENCRYVH----PVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL-- 478
           S L   +Y H    P      P+V    ++T+++GTGLVH+AP HG EDYV   + G+  
Sbjct: 354 SQLVGTQYNHTFHPPSSPLPKPIVFAAGHVTSQTGTGLVHSAPAHGYEDYVAFAEAGIMP 413

Query: 479 -PILSPVDDEGKFTEE-----------AGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPY 526
             +  P+DD+GKFT+E                G +VLG G  A+V  L E+  L+ +E  
Sbjct: 414 EKLRCPIDDDGKFTDELVSWAGARDAPVSSLVGKEVLGKGTDAMVDLLRERGILLADETI 473

Query: 527 EHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVL---- 582
           EH+YPYDW++KKP I RAT QWFA VE  ++ AM A+ +V + P Q      A VL    
Sbjct: 474 EHRYPYDWKSKKPIIIRATPQWFADVEHIKEDAMAALEKVHFHPAQARKRLEAFVLSRSE 533

Query: 583 ------RLWVSSV----DYTGDVMIGPQVLRQM 605
                 R W   +    D  G  ++ P VL  +
Sbjct: 534 WCISRQRSWGVPIPALFDSAGQPLMTPDVLEHV 566



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 106/195 (54%), Gaps = 15/195 (7%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P Q   G   +VLRLW +SVDYT D  IGP  +  ++++ R+LR T R++L N      G
Sbjct: 688 PMQIIHGLEVNVLRLWAASVDYTSDASIGPSSISHVNELLRRLRNTTRFVLANTS----G 743

Query: 630 NSISY---DDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
               Y     L +ID+Y L +L ++  +++E+Y+ Y F K    I  F    LS  YFD+
Sbjct: 744 EDKIYLEPSSLRIIDRYVLHELASLEASVQEAYDGYNFSKAIHSISTFATSTLSTLYFDI 803

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 746
            KD LY   + S TR +   VL   LL +V+++API+PHL+E++++N+       DG   
Sbjct: 804 IKDTLYCDPSNSTTRNNVIGVLQHVLLRLVQMMAPIVPHLSEELYENM-------DGPKK 856

Query: 747 EFVFESKWPVLDEKW 761
             VF   W   D+ W
Sbjct: 857 SSVFLETWKP-DQSW 870


>gi|291279575|ref|YP_003496410.1| isoleucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754277|dbj|BAI80654.1| isoleucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 933

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 201/471 (42%), Positives = 281/471 (59%), Gaps = 30/471 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRV-ADKNDGENFVLHDGPPYANGN 164
           YK T++LPKT F M+AN    EP   K W+D +V+ ++ ++++D + ++LHDGPPYANG+
Sbjct: 3   YKDTLNLPKTNFPMKANLTKNEPLRLKKWEDSKVYEKILSNRDDNKKYILHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I + K    +K  YVPGWDCHGLPIE +V + L +  KKD  P   
Sbjct: 63  LHMGHALNKILKDFIIKTKSGFGFKTPYVPGWDCHGLPIEHQVDKELGK--KKDSIPKHE 120

Query: 225 RAKAAK-FAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
           + K  + +A+  +  Q   FKR GV+ DW NPY+T+D  YEA  ++   +    G  Y+G
Sbjct: 121 KRKHCRAYAEKFINIQREEFKRLGVFGDWENPYITMDFAYEANTLKELYKFFNNGGAYKG 180

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+W  S  TALAEAE+EY + H S SIY  F +        G+  E        +WT
Sbjct: 181 LKPVYWCISCVTALAEAEVEYHD-HTSPSIYVKFPLQDDAKKALGIETE---KAFAVIWT 236

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +A+N + +YA++++             KKS   N+  D     +++A +
Sbjct: 237 TTPWTIPANLGIALNPEFEYALLKV-------------KKSNNKNIDNDD---ILVLAKE 280

Query: 404 LVPTL-EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV  L E     +  I KT     +EN    HP  +R    V+ G+++T E GTGLVHTA
Sbjct: 281 LVERLVEIFEIEEYDIIKTFNPEIIENKNAKHPFYDRNSLFVL-GNHVTLEQGTGLVHTA 339

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHGQEDY   LKYGL IL+PVDD G F ++   F+G ++    N  ++  +DE  +LI 
Sbjct: 340 PGHGQEDYEVGLKYGLEILNPVDDYGNFKKDTELFAGQNIFK-ANQDIINLMDENKTLIR 398

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQ-VKWVP 570
           ++  EH YP+ WR K P +FRAT QWF S+E    R+ A++ I + V W+P
Sbjct: 399 QDKVEHSYPHCWRCKNPVVFRATPQWFISMEKNDLRKKALEEIDKNVTWIP 449



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 105/168 (62%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
            P +    YGA++LRLWV++ DYT DV I   +++++ + YRK+R T+RYLLGNL+D+  
Sbjct: 620 TPDEIIDKYGAEILRLWVAAEDYTEDVRISNDIIKRLVESYRKIRNTMRYLLGNLYDFNP 679

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             NSI ++ L  +D+Y L + + + K I ++YE+YQF   +  +  F I DLS FY D+ 
Sbjct: 680 DENSIPFEKLKELDKYILMRWQEVKKRIYKAYENYQFHIFYHTLINFCINDLSAFYLDII 739

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KDR+Y     SF RRS Q+ +      +  V+ PIL   A++VW+ LP
Sbjct: 740 KDRVYAYKNDSFERRSAQSTMFTLAKEMAIVMNPILSFTADEVWEFLP 787


>gi|302666831|ref|XP_003025011.1| hypothetical protein TRV_00816 [Trichophyton verrucosum HKI 0517]
 gi|291189091|gb|EFE44400.1| hypothetical protein TRV_00816 [Trichophyton verrucosum HKI 0517]
          Length = 1012

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 206/483 (42%), Positives = 281/483 (58%), Gaps = 47/483 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R  AL  + +  K   D     +  ++     F LHDGPPYANG+L
Sbjct: 12  WSSTLKLPKSTFPPRI-ALADQSKYLKRCSDDLYSWQQRNRPATATFTLHDGPPYANGDL 70

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDE-----DAKKDLT 220
           H+GHALNKILKDII R +L +  +V YVPGWDCHGLPIELK LQ   E      A +D  
Sbjct: 71  HIGHALNKILKDIICRVQLAKGKRVHYVPGWDCHGLPIELKALQGQKELGDLRSAGRD-G 129

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
            +++R+ A + A+ TV  QM  F+ + +  DW N Y T++ ++E  Q+ VF +M  +G I
Sbjct: 130 AAQIRSAARQLAEKTVSQQMEGFRNWAIMGDWENAYTTMNKDFERRQLAVFLEMVEKGLI 189

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL---PDL 337
           YR  KPV+WSPSS TALAEAELEY E H+S +    F + + P   S +L   L    D+
Sbjct: 190 YRRYKPVYWSPSSGTALAEAELEYKEDHISTAALVKFVLDNLP---SQILEHPLLAGNDI 246

Query: 338 GLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVF 397
              +WT TPWT+PANAA+AVN   +Y +V+                +R G +L  Q ++ 
Sbjct: 247 SAVIWTMTPWTLPANAALAVNPDFEYTIVD---------------STRHGKLLVAQSRL- 290

Query: 398 IIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVH----PVDNRQCPVVIGGDYITTE 453
                 L   LE  +    VI   + GS+L N  Y      P   +Q   +I  +++T +
Sbjct: 291 ----QYLQELLEEDF---TVIIPAIMGSELLNSTYRSHFKGPESEKQ--RIIAAEFVTAD 341

Query: 454 SGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNV 508
           +G+G+VH APGHG EDY   L  G+P  +PVD EG+FT+ A        +G +VLGDGN 
Sbjct: 342 AGSGIVHCAPGHGMEDYEACLALGIPAYAPVDGEGRFTQSAMPTKPDLLTGKEVLGDGNH 401

Query: 509 AVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKW 568
           AV+K+L E   LI +  Y+HKYPYDWR+K P I RATEQWFA V   R  A+ A+  V++
Sbjct: 402 AVIKHLSETGILIHKHDYKHKYPYDWRSKLPVIIRATEQWFADVGDIRGEAIQALQSVQF 461

Query: 569 VPP 571
           +PP
Sbjct: 462 IPP 464



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 92/158 (58%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
           G D LRLW +  DYT DV+IG QVL+ ++    K R T + LLG L D+   N + Y+ L
Sbjct: 678 GPDALRLWAAGSDYTKDVIIGQQVLKAVNISLHKFRVTFKLLLGALQDFDPRNEVPYESL 737

Query: 638 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
             ID+ AL QL N+VK+ +E+ +  +FFK    + ++  ++ S FY +  KDRLY    +
Sbjct: 738 HAIDKIALVQLHNLVKSSQEAVDKMEFFKAVTAMNKWANLEFSAFYIEAIKDRLYADSES 797

Query: 698 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
             +RR+ QT L      I  ++ PI+P L E+ W++ P
Sbjct: 798 GMSRRAAQTTLFHIYTHIQSLLGPIVPLLVEETWEHTP 835


>gi|90407186|ref|ZP_01215374.1| isoleucyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90311762|gb|EAS39859.1| isoleucyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 944

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 199/476 (41%), Positives = 282/476 (59%), Gaps = 43/476 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRV-ADKNDGENFVLHDGPPYANGN 164
           YK T++LPKT F MRAN   REP + K W  + ++ ++ A K   + F+LHDGPPYANG+
Sbjct: 4   YKSTLNLPKTGFPMRANLANREPNMLKNWYSNDLYGKIRAAKKGKKTFILHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH++NKILKDII + K L ++   Y+PGWDCHGLPIELKV Q   +  KK LT ++ 
Sbjct: 64  IHIGHSVNKILKDIIIKSKTLSDFDAPYIPGWDCHGLPIELKVEQKHGKPGKK-LTAAQF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V  Q   FKR GV  DW+NPYLT+D + EA  +    ++  +G++ +G 
Sbjct: 123 RIKCREYAARQVDGQRKDFKRLGVLGDWDNPYLTMDFKTEANIVRSLAKVISKGHLLKGS 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-----L 339
           KPVHW     +ALAEAE+EY E  +S ++   F  V  P       N    DLG     +
Sbjct: 183 KPVHWCTDCGSALAEAEVEY-EDKMSPAVDVAFCAVE-PEKVLACFNAQSDDLGSGDICM 240

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN A+A+ AK++Y++++         A P                  +I
Sbjct: 241 VIWTTTPWTLPANRAIALAAKVEYSLIQ---------AGPRR----------------LI 275

Query: 400 VASDLVPTLEAKWGTKLVIKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGT 456
           +A++L  +   ++  K+   KTLA   G DLE   + HP  + Q P ++  D++T E+GT
Sbjct: 276 LATELAESCLQRY--KIEGAKTLAICSGLDLEKQLFSHPFLDLQVPAIV-ADHVTIEAGT 332

Query: 457 GLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDE 516
           G VHTAPGHGQ+DY   LKY L + +PV D G F  +   F+G+ V    N  VV+ L E
Sbjct: 333 GCVHTAPGHGQDDYSVGLKYDLEVANPVADNGVFRPDTEYFAGMHVF-KANDRVVEVLTE 391

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           + +L+  +  +H YP+ WR K P IFRAT QWF S++  G R +A+  I  VKW+P
Sbjct: 392 KDALLCYQKIKHSYPHCWRHKTPIIFRATPQWFISMDQKGLRDSALQEIKNVKWIP 447



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 117/205 (57%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  + PQ      GADVLRLWV+S DYTG++ +  ++L + +D YR
Sbjct: 603 VDGDGKKMSKSIGNV--MSPQVVMNNLGADVLRLWVASTDYTGEITVSDEILNRSADSYR 660

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+LL NL+ +    + ++  D+  +D++ + Q +++ K +   Y++Y    + +
Sbjct: 661 RIRNTARFLLSNLNGFDPKTDMVASSDMIALDRWIVAQADSLQKELIADYDAYNLHAVHK 720

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  ++L +FY D+ KDR YT  +    RRSCQT +   + ++VR IAPIL   A++
Sbjct: 721 KLTHFCSIELGSFYLDIIKDRQYTAKSEGIARRSCQTAMYHLIEAMVRWIAPILSFTADE 780

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   EFVF   W
Sbjct: 781 IWGRMP-------GERDEFVFTGVW 798


>gi|296479298|tpg|DAA21413.1| TPA: isoleucyl-tRNA synthetase 2, mitochondrial [Bos taurus]
          Length = 919

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 188/421 (44%), Positives = 256/421 (60%), Gaps = 28/421 (6%)

Query: 152 FVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL 211
           F   DGPPYANG+ H+GHALNKILKDI NRY +++  K+ +VPGWDCHGLPIE+KVL  L
Sbjct: 16  FCXFDGPPYANGDPHVGHALNKILKDIANRYHMMRGSKIHFVPGWDCHGLPIEIKVLSEL 75

Query: 212 DEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVF 271
              A+ +L+  ++R KA  FAKA ++ Q  SF R+G+ ADWNN Y T D  YEA Q+ +F
Sbjct: 76  GGKAQ-NLSAMEIREKARSFAKAAIEKQKLSFIRWGIMADWNNCYYTFDGRYEAKQLRIF 134

Query: 272 GQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLN 331
            QM  +G IYR  KPV WSPSSRTALAEAELEY   H+SRS+Y  F ++   P  + LL+
Sbjct: 135 YQMYDKGLIYRSYKPVFWSPSSRTALAEAELEYNPEHISRSVYVKFPLLKPSPKLASLLD 194

Query: 332 EFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLK 391
              P +   VWTT PWT+PAN AV    + +YAVV+  S   GD                
Sbjct: 195 GSSP-VSFLVWTTQPWTIPANQAVCYMPESKYAVVKCSS--SGD---------------- 235

Query: 392 DQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHP-VDNRQCPVVIGGDYI 450
                  I+ +D V ++ +  GT   +  T +G DLEN    HP +  R+ P ++  +++
Sbjct: 236 -----LYILGADKVTSVASTLGTTFEVISTFSGVDLENGSCAHPLISERESP-LLPANHV 289

Query: 451 TTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVA 509
           T   GTGLVHTAP HG EDY  + ++ L     V+++G FT+ AG +     VL +G  A
Sbjct: 290 TMTKGTGLVHTAPAHGMEDYSVAAQHNLSTDCLVNEDGVFTDAAGPELQNKAVLKEGTDA 349

Query: 510 VVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
           V+  L    +L+ EE   H YPYDWRTKKP + RA++QWF ++   +  A + + +VK++
Sbjct: 350 VIMMLQAAKNLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNITDIKTTAKELLKKVKFI 409

Query: 570 P 570
           P
Sbjct: 410 P 410



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 81/189 (42%), Positives = 111/189 (58%), Gaps = 7/189 (3%)

Query: 575 PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-GNSIS 633
           P YGADVLR WV+  +   +V I P +L    D   KLR TLR+LLGN+  +    +SI 
Sbjct: 596 PPYGADVLRWWVAESNVFTEVTISPSLLNAARDDISKLRNTLRFLLGNVAGFNPETDSIP 655

Query: 634 YDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYT 693
            + + +IDQY L  L+++   I +SY+ Y F K+ +++Q F   +LSNFYF + KDRLY 
Sbjct: 656 VNSMYVIDQYMLHLLQDLANKINDSYKQYDFGKVVRLLQAFYTRELSNFYFSIIKDRLYC 715

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRSCQT L+  L  +VR  APILPHLAE+V+Q++P  Y  E  S    VF + 
Sbjct: 716 ENADDPKRRSCQTALAEILDVMVRSFAPILPHLAEEVFQHIP--YIKEPKS----VFRTG 769

Query: 754 WPVLDEKWR 762
           W      W+
Sbjct: 770 WIKTSSIWK 778


>gi|386288500|ref|ZP_10065641.1| isoleucyl-tRNA synthetase [gamma proteobacterium BDW918]
 gi|385278516|gb|EIF42487.1| isoleucyl-tRNA synthetase [gamma proteobacterium BDW918]
          Length = 940

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 197/496 (39%), Positives = 280/496 (56%), Gaps = 40/496 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YKHT++LP+T+F M+AN   REP + K W +  V+ ++ D   G + FVLHDGPPYANG+
Sbjct: 4   YKHTLNLPETSFAMKANLAQREPGMLKRWQEEDVYQQIRDARAGRQKFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K L  +   YVPGWDCHGLPIEL V + + +  +K +  +  
Sbjct: 64  IHIGHAVNKILKDIIVKSKTLSGFDAPYVPGWDCHGLPIELNVEKKVGKAGQK-VDAATF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V  Q   FKR GV+ DW  PYLT+D  +EA  I   G++   G++++G 
Sbjct: 123 REKCREYAYKQVNGQREDFKRLGVFGDWEKPYLTMDFGFEANIIRALGKIVDNGHLHKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMV--SAPPSTSGLLNEFLPDLGLAVW 342
           KPVHW     +ALAEAE+EY +   S +I   F  V  +A  +  GL  +   +L L +W
Sbjct: 183 KPVHWCMDCGSALAEAEVEYKD-KTSPAIDVAFAAVDRAAMLAAGGLPADTAGELNLVIW 241

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN AV+++ +L Y  V                           + + +++A 
Sbjct: 242 TTTPWTIPANMAVSLHPELDYVWVSYTR--------------------NSGETIVVLLAD 281

Query: 403 DLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            L  +  A++G +   I     G+ LEN    HP+ +RQ PV++ GD++TT++GTG VHT
Sbjct: 282 ALHESAMARYGVEDFTIVGRCKGAALENLLLHHPLYSRQVPVIL-GDHVTTDAGTGAVHT 340

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HGQ+D+V    YGL + +PV   G F  +   F+G  V    N  V++ L E+  L+
Sbjct: 341 APAHGQDDFVVGKAYGLEVYNPVAANGTFLPDTELFAGQHVF-KANDNVIEALSERGRLL 399

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASV--EGFRQAAMDAIGQVKWVPP-------- 571
           + +P EH YP+ WR K P IFRAT QWF S+   G    AM  +  V W+P         
Sbjct: 400 LHKPLEHSYPHCWRHKSPIIFRATPQWFVSMTQNGLLDTAMKEVDAVNWMPGWGRARIES 459

Query: 572 --QEAPGYGADVLRLW 585
             QE P +     R W
Sbjct: 460 MMQERPDWCVSRQRTW 475



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 112/195 (57%), Gaps = 11/195 (5%)

Query: 562 AIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 620
           ++G V  V PQ+     GAD+LRLWV++ DY  ++ +  ++ ++ +D YR++R T R+LL
Sbjct: 610 SVGNV--VAPQKVMNTLGADILRLWVAATDYRNEMTVSDEIFKRTADSYRRIRNTARFLL 667

Query: 621 GNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDL 679
            N+  +    +++   ++  +D++ + +   +   I  +YE+YQF  I+Q +  F +++L
Sbjct: 668 ANMAGFEPKEHAVELGEMLAMDRWIMHRAAELQDEIVAAYEAYQFHLIYQKLHNFCVLEL 727

Query: 680 SNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT 739
             FY D+ KDR YT    S  RRS QT +     ++ R IAPIL   A+++W++LP    
Sbjct: 728 GGFYLDIIKDRQYTTKANSLARRSAQTAMYHIAEALTRWIAPILSFTADELWEHLP---- 783

Query: 740 LEDGSAAEFVFESKW 754
              G  +  VF ++W
Sbjct: 784 ---GQRSGTVFAAEW 795


>gi|167755754|ref|ZP_02427881.1| hypothetical protein CLORAM_01269 [Clostridium ramosum DSM 1402]
 gi|167704693|gb|EDS19272.1| isoleucine--tRNA ligase [Clostridium ramosum DSM 1402]
          Length = 901

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 192/460 (41%), Positives = 273/460 (59%), Gaps = 38/460 (8%)

Query: 112 LPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGNLHMGHA 170
           +PKT F MR N   +EP+  + W    ++ RV ++N G E+FV HDGPPYANGN+HMGH 
Sbjct: 1   MPKTEFEMRGNLPKKEPKYVERWQKENMYERVIEQNKGKEDFVFHDGPPYANGNMHMGHM 60

Query: 171 LNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAK 230
           LNK++KD+I RY  ++     Y+PGWD HGLPIE   +Q L  + +K+++ +  R K  +
Sbjct: 61  LNKVIKDVICRYNNMEGRYTPYIPGWDTHGLPIE-NAIQKLGVN-RKEMSTAAFREKCDE 118

Query: 231 FAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWS 290
           +A   V  QM    R G +AD+ +PYLTL PE+EA QI+VF +M++ G I++G KPV+WS
Sbjct: 119 YAHEQVNKQMEQLIRMGTFADYKHPYLTLMPEFEANQIDVFAKMAMDGLIFKGLKPVYWS 178

Query: 291 PSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVP 350
           PSS +ALAEAE+EY +   S +I+  F    A     G+L+    D    +WTTTPWT+P
Sbjct: 179 PSSESALAEAEIEYHDIK-SPTIFVKF----AVKDGKGILD---TDTSFVIWTTTPWTIP 230

Query: 351 ANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEA 410
           AN A+ +N +  YA++E                           K  +IV ++LV +L  
Sbjct: 231 ANLAICLNERYDYALIETT-------------------------KGKLIVLNELVDSLME 265

Query: 411 KWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQED 469
           K+  T+  + K   GS+LE     HP+ +R+  +VI GD++T E+GTG VHTAPG G +D
Sbjct: 266 KFEITEYKVIKNFKGSELELITCQHPLYDRE-SLVILGDHVTAEAGTGCVHTAPGFGADD 324

Query: 470 YVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHK 529
           +    KYGLP    VD+ G   ++ G++     + D N  V   LDE   L+  E   H 
Sbjct: 325 FFVGQKYGLPAYCNVDEHGCMMKDCGEWLEGQYVDDANKTVTMKLDELGVLLKLEFITHS 384

Query: 530 YPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
           YP+DWRTKKP IFRAT+QWF SV+  R+  +  I +V W+
Sbjct: 385 YPHDWRTKKPIIFRATDQWFCSVDKIREKLLSEIDKVNWL 424



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 103/161 (63%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +    YGAD++RLW +SV Y  DV I   +++Q+S+ YRK+R T+R++LGNL+D++  
Sbjct: 596 PIKLVNQYGADIVRLWATSVAYQQDVRISNDIMKQISENYRKIRNTMRFVLGNLNDFKQA 655

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
           + ++ + L  +D+Y L QL +++K   ++Y++Y F +  Q+I  +    LS+FY D  KD
Sbjct: 656 DLVAVEALADVDKYMLAQLNDLIKGYHKAYDNYDFAEANQLILNYFTNLLSSFYMDFTKD 715

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
            LY     S  RR  QTVL  H  +++++I+P+L   AE++
Sbjct: 716 ILYIEKADSLRRRQVQTVLYYHAKAMMKLISPVLVFTAEEL 756


>gi|373121509|ref|ZP_09535377.1| isoleucine-tRNA ligase [Erysipelotrichaceae bacterium 21_3]
 gi|371665527|gb|EHO30692.1| isoleucine-tRNA ligase [Erysipelotrichaceae bacterium 21_3]
          Length = 908

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 200/470 (42%), Positives = 273/470 (58%), Gaps = 42/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANG 163
            YK T+ +PKT F MR     +EP   K W + +++ ++ +  +G E FVLHDGPPYANG
Sbjct: 2   EYKDTLLMPKTRFEMRGKLPTKEPNFQKRWKESEIYEKMLENREGCEAFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++H+GHALNKILKD+I R + +  YKV YVPGWD HGLPIE   +Q L  + +K++  S 
Sbjct: 62  DIHLGHALNKILKDVIIRNRYMAGYKVPYVPGWDTHGLPIE-TAIQKLGHN-RKEMELSD 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   V  Q   F   GV  D+++PY+TL  ++EA QIE+F  M++ G IY+G
Sbjct: 120 FRKLCYDYALEQVDRQKKGFLSLGVVGDYDHPYITLTKDFEAHQIEIFASMAMDGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS TALAEAE+EY +   S +I+  F    A     G+L+    D    +WT
Sbjct: 180 LKPVYWSPSSETALAEAEIEY-KNIKSPTIFVKF----AVKDGKGVLD---SDTSFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + +N    YA+VE                          +K  +IV  +
Sbjct: 232 TTPWTIPANLGICLNKDYTYALVE-------------------------SEKGKLIVLEE 266

Query: 404 LVPTLEAKWGTKLVIKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           LV  L  K+G  L  KK LA   GS+LE     HP+ +R+  +VI GD++T ++GTG VH
Sbjct: 267 LVDALWEKFG--LETKKKLATYKGSELEMITCQHPLYDRE-SLVILGDHVTADAGTGCVH 323

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPG G +D+    KYGLP    VD+ G   E+AG +     + D N  V + LD   +L
Sbjct: 324 TAPGFGADDFFIGQKYGLPAYCNVDEHGCMMEDAGDWLKGQYVDDANKTVTQRLDAMGAL 383

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +  E   H YP+DWRTKKP IFRAT QWFAS++  R+  +  I  V W+P
Sbjct: 384 LKLEFITHSYPHDWRTKKPIIFRATTQWFASIDKIREKLLTEIANVDWIP 433



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 98/165 (59%), Gaps = 8/165 (4%)

Query: 574 APG-----YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH---D 625
           APG     YGAD+LRLW +SVDY  D  +  ++L+Q+S+ YRK+R T R++L N++   D
Sbjct: 603 APGEITKKYGADILRLWATSVDYQADCSMSDEILKQISEQYRKVRNTFRFMLANVNPEED 662

Query: 626 WRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFD 685
           +   + +  ++LP +D+Y L  L  + +   ++Y+ Y+F  I  ++   +  +LS +Y D
Sbjct: 663 FTKEDLVDINELPELDKYILVLLNEVNEKAIKAYKEYRFADITNMLSNLMTNELSAYYMD 722

Query: 686 VAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
             KD LY     +  RR  QTVL   + ++VR+ APIL H  E+V
Sbjct: 723 YTKDILYIEKKDAPRRRQVQTVLWHAVNTLVRLWAPILVHTCEEV 767


>gi|347730910|ref|ZP_08864020.1| isoleucyl-tRNA synthetase [Desulfovibrio sp. A2]
 gi|347520416|gb|EGY27551.1| isoleucyl-tRNA synthetase [Desulfovibrio sp. A2]
          Length = 935

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 201/470 (42%), Positives = 274/470 (58%), Gaps = 36/470 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ LP T F M+AN   REPE+ K W+    +  +A  +  +  +VLHDGPPYANG+
Sbjct: 4   YKKTLHLPDTKFPMKANLTQREPEMLKFWEGIDAYAAMAQASGQKGQYVLHDGPPYANGH 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G ALNKILKD++ + + +Q Y  RYVPGWDCHGLPIE KV Q L E  KK+L    +
Sbjct: 64  IHLGTALNKILKDMVVKSRNMQGYSARYVPGWDCHGLPIEHKVEQELGEK-KKELPAHVV 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  ++A+  +  Q   FKR GV   W+ PY+T+DP YE+A     G     G + R K
Sbjct: 123 RKRCRQYAEKYLDIQRKEFKRLGVLGAWDKPYMTMDPAYESATARELGNFVAAGNVVRSK 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KP++W  S +TALAEAE+EY + H S SI+  F +  A    + +LN       + +WTT
Sbjct: 183 KPIYWCCSCQTALAEAEVEYYD-HTSPSIFVRFPLRDA--RVADVLNVDPASAYIVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P N AVAV+    YAVV                                ++A+ L
Sbjct: 240 TPWTLPDNMAVAVHPDHDYAVVR-------------------------HDGAHYVLAAAL 274

Query: 405 VPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V +    +G +   I  T+AG+ LE     HP  +R  PVV+  DY+T +SGTG VHTAP
Sbjct: 275 VESSAKTFGWEGFEIVGTVAGAKLEGLAATHPFYDRPSPVVL-ADYVTLDSGTGCVHTAP 333

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+EDY T L+YGL ILSP++DEG+F +    F+GL V  + N  V++ + E  +L+ E
Sbjct: 334 GHGREDYETGLRYGLEILSPMNDEGRFLDSVPFFAGLTVF-EANPKVIEKMREVGNLLAE 392

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAI-GQVKWVP 570
               H YP+ WR KKP IFRAT QWF ++E    R  A+ AI   V+W+P
Sbjct: 393 RKLSHSYPHCWRCKKPVIFRATTQWFIAMEKNELRARALSAIRNDVRWIP 442



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/187 (40%), Positives = 113/187 (60%), Gaps = 3/187 (1%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  + PQE    YGA++LRLWV+SVDY  D+ I  ++L ++ D YR
Sbjct: 600 VDGEGRKMSKSIGNV--IAPQEIIDKYGAEILRLWVASVDYREDIRISDEILSRLVDAYR 657

Query: 611 KLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 670
           ++R T RYLLGN+ D      + +  +  +D+YAL  + +    I+E+Y  ++F K+F  
Sbjct: 658 RIRNTCRYLLGNIDDLTPEEIVPFSVMDPLDRYALDIVTDAHARIQEAYSEFEFHKVFHT 717

Query: 671 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
           +    + DLS FY DV KDRLY     S  RRS QT L   LL +VR +AP+L   AE+V
Sbjct: 718 LHNLCVTDLSAFYLDVLKDRLYASAKDSPERRSAQTALLHILLVLVRDMAPVLSFTAEEV 777

Query: 731 WQNLPFA 737
           ++++P A
Sbjct: 778 FRHIPEA 784


>gi|269467789|gb|EEZ79547.1| isoleucyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 923

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 192/475 (40%), Positives = 279/475 (58%), Gaps = 50/475 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T++LP T+F M+AN   RE    K W D  ++ R+ + N G++ F+LHDGPPYANG+
Sbjct: 4   YKATLNLPATSFAMKANLANREGGFLKKWQDDNLYARIREHNQGKSKFILHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NK+LKDII + K L  +   YVPGWDCHGLPIE  V +   +   K +  +  
Sbjct: 64  IHIGHAVNKVLKDIIVKSKTLSGFDAPYVPGWDCHGLPIEHNVEKKKGKVGHK-IDANAF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           RA+  K+A++ V  Q   F+R G+  DWNNPYLT D +YEA  +   G++  +G++ +G 
Sbjct: 123 RAECRKYAQSQVDKQKQDFQRLGILGDWNNPYLTKDFQYEADIVRALGEIVEKGHVSKGY 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPVHW     +ALAEAE+EY +   S +I   FR++        +  +  P + + +WTT
Sbjct: 183 KPVHWCTECGSALAEAEVEYKDKK-SDAIDVKFRIID-----DDIFAQTKP-VSVIIWTT 235

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN AVA++  L Y +V++     GD                     + ++A DL
Sbjct: 236 TPWTLPANEAVALHPDLNYVLVDV-----GDE--------------------YYLLAQDL 270

Query: 405 VPTLEAKWGTK--LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           + T   ++G     V K+   GS+LE  +  HP  ++Q  +++  D++TTE+GTG VHTA
Sbjct: 271 LETTLKRYGITDAKVGKQAFVGSELEGLKVQHPFYDKQVSIIL-ADHVTTEAGTGAVHTA 329

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLG-----DGNVAVVKYLDEQ 517
           P HGQEDYV  +KY LP+  PVD  G F      F  +++LG       N +V++ L+  
Sbjct: 330 PAHGQEDYVVGIKYNLPVECPVDGRGVF------FKNVELLGGQFIFKANASVIEILENA 383

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            +L+  EP EH YP+ WR K P IFRAT QWF S+E  G R +    I +V+W+P
Sbjct: 384 NTLVKHEPIEHSYPHCWRHKTPVIFRATPQWFVSMEQNGLRDSVNAEIPKVQWIP 438



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 115/208 (55%), Gaps = 10/208 (4%)

Query: 562 AIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 620
           ++G V  +PPQ+     GAD+LRLW++S DYTG++ +  ++L++ +D YR++R T+R++L
Sbjct: 598 SLGNV--IPPQKVVNSLGADILRLWIASTDYTGEMTVSDEILKRSADSYRRIRNTVRFML 655

Query: 621 GNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDL 679
            N+  +      + ++ +  +D++ + +  ++   +   Y++Y F  + Q+I  F   DL
Sbjct: 656 SNMQGFDASQHLVDHNKMLDLDKWIVSKTADLQAQVLHGYDTYNFHHVMQLILNFCTNDL 715

Query: 680 SNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT 739
             FY D+ KDR YT    S  RRS Q+ L     ++VR ++P+L   AE++WQ      T
Sbjct: 716 GGFYLDIIKDRQYTTQEDSLARRSAQSALHHLTQAMVRWLSPVLSFTAEEIWQ------T 769

Query: 740 LEDGSAAEFVFESKWPVLDEKWRTFPVG 767
           L D        +S +  L   ++   +G
Sbjct: 770 LSDDQEQSIFLQSWYEGLSTGYKNKAIG 797


>gi|241895683|ref|ZP_04782979.1| isoleucyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241871050|gb|EER74801.1| isoleucyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 932

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 206/469 (43%), Positives = 280/469 (59%), Gaps = 38/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MR N    E +   +W +++V+ R    N G+ +F+LHDGPPYANG
Sbjct: 4   KIKQTLNLGKTKFPMRGNLPQTELQRENIWFENKVYERRQKLNAGKPSFMLHDGPPYANG 63

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHA+NKI KDII RYK +  Y   YVPGWD HGLPIE ++ ++  +  +K + P  
Sbjct: 64  NIHIGHAMNKISKDIIVRYKSMNGYYAPYVPGWDTHGLPIEQQLTKAGKD--RKKVGPVI 121

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R  A +FA   VK QMA FKR GV ADW++PYLTL P +EAAQ+ VFG M+ +  I+RG
Sbjct: 122 WRKMADEFAHKQVKKQMADFKRLGVSADWDHPYLTLQPSFEAAQLRVFGSMAKRDLIFRG 181

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +ALA AE+EY +   S S +   ++        G+L++   D  L  WT
Sbjct: 182 KKPVFWSWSSESALAMAEIEYHDV-TSESAFISEKIKDG----KGVLDQ---DTYLVAWT 233

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWTVPA+ A+AV+   +Y  V+                  P N  K       +VA  
Sbjct: 234 TTPWTVPASQALAVHPDFKYVQVQ------------------PQNTTKK-----YLVAES 270

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ +L  K+G  +  I  T  G DLE     HP  +R   VV+  DY+T ++GTGLVHTA
Sbjct: 271 LLSSLSEKFGWEEPTILATFEGKDLEYMVTEHPYMDRDILVVL-ADYVTDDTGTGLVHTA 329

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLI 521
           PG G++D++T  +YG+  +  VDD G  T EAG+ F G+    D N   ++ L +  +L+
Sbjct: 330 PGFGEDDFMTGKRYGITPIMNVDDRGYLTAEAGEDFDGV-FYEDANELSLQKLRDVDALV 388

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             EP  H YP+DWRTKKP IFRA  QWFAS+  FRQ  +DA+  V + P
Sbjct: 389 KSEPITHSYPFDWRTKKPVIFRAVPQWFASINSFRQEILDALDDVTFKP 437



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 105/160 (65%), Gaps = 1/160 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GA+++RLWVS+VD + DV +   +L Q S+IYRK+R T+R+LL N  D+    ++++Y+D
Sbjct: 617 GAEIIRLWVSTVDTSADVRVSMDILSQTSEIYRKIRNTMRFLLANTADFNPNEDTVAYED 676

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D+Y   +   ++  ++ +Y++Y F  + +++  FI VDLS FY D AKD LY    
Sbjct: 677 LTEVDKYFYARFNQLISELKAAYDAYDFQSVHKLLINFINVDLSAFYLDFAKDILYVEAP 736

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
               RRS QTVL   ++ + +++ PILPH AE++++ LP+
Sbjct: 737 NGHLRRSLQTVLYKIVVGLDKLMLPILPHTAEEIFEYLPY 776


>gi|354465154|ref|XP_003495045.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like
           [Cricetulus griseus]
          Length = 1136

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 193/427 (45%), Positives = 255/427 (59%), Gaps = 26/427 (6%)

Query: 145 DKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIE 204
           ++     F LHDGPPYANG+ H+GHALNKILKDI NRY +++  KV +VPGWDCHGLPIE
Sbjct: 226 ERKGKTEFCLHDGPPYANGDPHIGHALNKILKDIANRYHMMRGSKVHFVPGWDCHGLPIE 285

Query: 205 LKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYE 264
            KVL  L   A+  L+  ++R KA  FAKA ++ Q ++F R+GV ADWNN Y T D +YE
Sbjct: 286 TKVLSELGVSAQT-LSAMEIREKARSFAKAAIEKQKSAFARWGVMADWNNCYYTFDAKYE 344

Query: 265 AAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPP 324
           A Q+ +F QM  +G +YR  KPV WSPSSRTALAEAELEY   HVSRSIY  F ++  PP
Sbjct: 345 AKQLRLFYQMYDKGLVYRSYKPVFWSPSSRTALAEAELEYNPEHVSRSIYVRFPLLQPPP 404

Query: 325 STSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKS 384
             + L +   P +   +WTT PWT+PAN AV    + +YAVV+  S   GD    A  K 
Sbjct: 405 KLASLTDGSSP-VSFLIWTTQPWTIPANQAVCYMPEAKYAVVKCSS--SGDIYILAEDKI 461

Query: 385 RPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVV 444
            P             VAS L  T E        +  T +G DLE     HP+   +   +
Sbjct: 462 SP-------------VASALETTFE--------VISTFSGVDLEGGTCSHPLIPDKVSPL 500

Query: 445 IGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVL 503
           +   ++T   GTGLVHTAP HG EDY  + ++ LP+   VD++G FT+ AG +     VL
Sbjct: 501 LPATHVTMAKGTGLVHTAPAHGMEDYSVASQHNLPMDCLVDEDGVFTDAAGPELENKAVL 560

Query: 504 GDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI 563
            +G   V+K L     L+ EE   H YP DWRTKKP + RA++QWF +++  +  A + +
Sbjct: 561 EEGTDVVIKMLQTAKHLLKEEKVVHSYPCDWRTKKPVVIRASKQWFINIKDIKATAKELL 620

Query: 564 GQVKWVP 570
             VK++P
Sbjct: 621 KTVKFIP 627



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 111/193 (57%), Gaps = 7/193 (3%)

Query: 571 PQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-G 629
           P + P YGAD LR W++  +   +V IGP  L    D   KLR TLR+LLGN+  +    
Sbjct: 809 PSKEPPYGADALRWWIAESNVFTEVAIGPSALSAARDDISKLRNTLRFLLGNVAGFNPET 868

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
           +S+   D+ +IDQY L  +++    + +SY+ Y F K+ ++++ F   +LS+FYF + KD
Sbjct: 869 DSVPVKDMYVIDQYMLHLIQDFSTKVTDSYKQYDFGKVIRLLKAFYTRELSSFYFSIVKD 928

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 749
           RLY        RRSCQT L+  L  +VR  APILPHLAE+V+Q++P  Y  E  S    V
Sbjct: 929 RLYCESEKDPKRRSCQTALAEILDVLVRSFAPILPHLAEEVFQHIP--YVKEPKS----V 982

Query: 750 FESKWPVLDEKWR 762
           F + W      W+
Sbjct: 983 FRTGWINTSSIWK 995


>gi|431902425|gb|ELK08925.1| Isoleucyl-tRNA synthetase, mitochondrial [Pteropus alecto]
          Length = 634

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 198/499 (39%), Positives = 284/499 (56%), Gaps = 37/499 (7%)

Query: 84  RSRGPVMAAKKAAEGE--KKEEGRYKHTVDLPKTTFGMRANALVR---EPEIHKLWDDHQ 138
           R+RGP++ +   A  +      GRY+ TV LP+T+F M+     +   E +I +     +
Sbjct: 33  RTRGPLVRSVTGASSQLPSSSNGRYRDTVLLPQTSFPMKLLGRQQPDTELDIQQKCGFSE 92

Query: 139 VFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDC 198
           ++    ++     F LHDGPPYANG+ H+GHALNKILKDI NRY +++  K+ +VPGWDC
Sbjct: 93  LYSWQRERKVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRYYMMRGSKIHFVPGWDC 152

Query: 199 HGLPIELKVLQSLDEDAKKDLTPSKLRAK------AAKFAKATVKAQMASFKRYGVWADW 252
           HGLPIE+K L  L     ++L+  ++R K      A   AKA ++ Q ++F R+G+ ADW
Sbjct: 153 HGLPIEIKALSELG-GKTQNLSAVEIREKEFTKFVAHGHAKAAIEKQRSAFIRWGIMADW 211

Query: 253 NNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRS 312
           NN Y T D  YEA Q+ +F QM  +G IYR  KPV WSPSSRTALAEAELEY   HVSRS
Sbjct: 212 NNSYYTFDGRYEAKQLRIFYQMFDKGLIYRSYKPVFWSPSSRTALAEAELEYNPKHVSRS 271

Query: 313 IYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLL 372
           IY  F ++   P  + L+    P +   +WTT PWT+PAN AV      +YA+V+  +  
Sbjct: 272 IYVKFPLLKPSPKLASLIEGSSP-VSFLIWTTQPWTIPANQAVCYMPDAKYALVKCST-- 328

Query: 373 EGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRY 432
                                 +   I+A+D V  + +   T   +  T +G+DLEN   
Sbjct: 329 ---------------------SEDLYILAADKVTPVASTLKTAFEVISTFSGADLENGTC 367

Query: 433 VHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTE 492
            HP+   +   ++  +++T   GTGLVHTAP HG EDY  + ++ L     VD++G F  
Sbjct: 368 THPLTPDKASPLLPANHVTMAKGTGLVHTAPAHGMEDYSVASQHNLSTDCLVDEDGVFKA 427

Query: 493 EAG-KFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFAS 551
            AG +     VL +G  AV+K L    +L+ EE   H YPYDWRTKKP + RA++QWF +
Sbjct: 428 AAGPELENKAVLEEGTDAVIKMLQAAKNLLKEEELLHSYPYDWRTKKPVVIRASKQWFVN 487

Query: 552 VEGFRQAAMDAIGQVKWVP 570
           +   +  A + + +VK++P
Sbjct: 488 IADLKATAKELLKKVKFIP 506


>gi|433448685|ref|ZP_20411551.1| isoleucyl-tRNA synthetase [Weissella ceti NC36]
 gi|429539612|gb|ELA07648.1| isoleucyl-tRNA synthetase [Weissella ceti NC36]
          Length = 930

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 202/468 (43%), Positives = 283/468 (60%), Gaps = 36/468 (7%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANG 163
           + K T++L KT F MR N    E +   +W +++V+      N+G+  F+LHDGPPYANG
Sbjct: 2   KIKETLNLGKTKFPMRGNLPQTELQRENVWFENKVYEARQKLNEGKPWFMLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHALNKI KDI+ RYK +  +   +VPGWD HGLPIE ++ ++  +  +K + P  
Sbjct: 62  NIHIGHALNKISKDILVRYKSMNGFNAPFVPGWDTHGLPIEQQLTKAGKD--RKKVGPVI 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R  AA+FA   VK Q   FKR G+ ADW+NPYLT D E+EAA++ VFG+M  +  IYRG
Sbjct: 120 WRKMAAEFADKQVKKQKDDFKRLGISADWDNPYLTKDQEFEAAEVRVFGKMVARDLIYRG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV WS SS +ALA AE+EY +   S S+    R+V       G+L+    D    VWT
Sbjct: 180 KKPVLWSWSSESALAMAEIEYHDV-TSTSVSFSERVVDG----KGVLDN---DTYFVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PA+ A+AVN   +Y VV+           PAN            KK  +  A  
Sbjct: 232 TTPWTIPASQAIAVNPNFEYVVVK-----------PANS----------DKKFVVANARL 270

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
                +  W    +I KT+ GSD++     HP  +R+  +VI GD++T E+GTGLVHTAP
Sbjct: 271 ATAAADFGWEEYEII-KTVKGSDIDRVTAQHPYLDREV-LVINGDHVTDEAGTGLVHTAP 328

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGK-FSGLDVLGDGNVAVVKYLDEQMSLIM 522
           G G++D+  + KY LP++  VD +GK T+E G+ F+G+    D N   ++ L E  +L+ 
Sbjct: 329 GFGEDDFYAAQKYDLPVIMNVDGQGKLTDETGEDFAGV-FYEDANEISLQKLTENDALVK 387

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +   H YP+DWRTKKP I+RA  QWFAS+E FRQ  +D++  V++ P
Sbjct: 388 AQEITHSYPFDWRTKKPVIYRAVPQWFASIEPFRQEILDSLDDVEFQP 435



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 126/219 (57%), Gaps = 12/219 (5%)

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYG 578
           SLI      HK PY          R   Q FA ++G       +IG    VP +     G
Sbjct: 567 SLITSVAVNHKAPYK---------RVISQGFA-LDGNGDKMSKSIGNTI-VPEEIVKDMG 615

Query: 579 ADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDDL 637
           A+++RLWV+SVD + DV +  ++L + SD YRK+R T+R+LL N+ D+    +++++ D+
Sbjct: 616 AEIIRLWVTSVDSSADVRVSKEILAKTSDTYRKIRNTMRFLLSNVDDFNPETDAVAFADM 675

Query: 638 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
             +DQY   +    V++++ +Y++Y F  I ++I  FI VDLS FY D AKD LY     
Sbjct: 676 TPVDQYFYARFNEFVRDVKAAYDAYDFQAINKLIINFINVDLSAFYLDFAKDILYVEAPK 735

Query: 698 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
              RRS QTVL   L+ + +++ PILPH AE++++ +PF
Sbjct: 736 GELRRSLQTVLYKILVDMNKMLLPILPHTAEEIFEYMPF 774


>gi|281492476|ref|YP_003354456.1| isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376140|gb|ADA65631.1| Isoleucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 932

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 197/470 (41%), Positives = 282/470 (60%), Gaps = 41/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MRA    +EP   K W D  ++ +  + N+G+ +F+LHDGPPYANG
Sbjct: 2   KIKDTLNLGKTAFPMRAGLPNKEPNWQKDWADATLYEKRQELNEGKPSFMLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GH+LNKI KDII RYK +  ++  YVPGWD HGLPIE ++ ++  +  + DL    
Sbjct: 62  NIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLPIEQQLAKAGMKRKEMDLL--D 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
              +  K+A   V  Q + FK  GV ADW+ PYLTL PEYEAAQI VFG+M+ +GYIY+G
Sbjct: 120 YLEECRKYAMKQVDMQRSDFKSLGVLADWDRPYLTLLPEYEAAQIRVFGKMAEKGYIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KP++WSPSS ++LAEAE+EY +   S S+Y  F+        + +  +   D    +WT
Sbjct: 180 AKPIYWSPSSESSLAEAEIEYQDVK-SPSLYVAFK-------ANDVQGKVPADTEFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TT WT P+N  + V+    Y VV+++           N+K               ++A D
Sbjct: 232 TTAWTFPSNRGIFVHPDYDYIVVQVE-----------NRK--------------FLIAKD 266

Query: 404 LVPTLEAK--WGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           L+ T+  K  W    V+ +T+ GS+LE     HP  +R   V++ GDY++ +SGTGLVHT
Sbjct: 267 LLETVSEKIGWENPQVL-QTIKGSELEYMTAKHPFYDRDSLVMV-GDYVSLDSGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           +P HG++DY  S KY LP++  +D +G FT EA  F G     +    V++ +     L+
Sbjct: 325 SPNHGEDDYQYSRKYKLPVIEDIDAQGYFTAEAEGFEG-QFYDNVEELVLEKMRATDRLL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
             E + H YP+DWRTKKP I+RAT QWFAS++ FRQ  +D + +V WV P
Sbjct: 384 HIEHFVHSYPHDWRTKKPVIYRATPQWFASIDQFRQNILDEVERVDWVIP 433



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 112/186 (60%), Gaps = 6/186 (3%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           +P      +GAD+LRLWV+S+D   DV +   +L Q+S++YRK+R TLR+L+ N  D+  
Sbjct: 603 LPKDVTKKFGADILRLWVASIDAESDVRVSMDILSQVSEVYRKIRNTLRFLIANTSDFNP 662

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             ++I + +L  +D+Y L +   +VK IR +Y++Y F  +++ I  FI  DLS+FY D A
Sbjct: 663 KEDAIDFAELRPVDKYMLVKFNELVKQIRTAYDNYSFMTVYKSIINFITNDLSSFYLDFA 722

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLED 742
           KD +Y     S  RRS QTV+   L  +V+++ PILPH AE+ W  L      FAY  E 
Sbjct: 723 KDVVYIEAANSPERRSMQTVMYVILKDLVKILVPILPHTAEETWTYLEHEPENFAYLAEM 782

Query: 743 GSAAEF 748
             AAE 
Sbjct: 783 PEAAEI 788


>gi|113460332|ref|YP_718393.1| isoleucyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|122945180|sp|Q0I1V8.1|SYI_HAES1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|112822375|gb|ABI24464.1| Isoleucyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 937

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 198/471 (42%), Positives = 281/471 (59%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T F MR +   REP++ K W D  ++ +V + + G+  F+LHDGPPYANG 
Sbjct: 4   YKNTLNLPETGFPMRGDLAKREPDMLKNWYDKNLYQKVREASKGKKTFILHDGPPYANGT 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHA+NKILKDII + K    +   YVPGWDCHGLPIELKV + L     + ++ ++ 
Sbjct: 64  LHLGHAVNKILKDIIMKSKTALGFDTPYVPGWDCHGLPIELKV-EGLVGKPNEKISAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +AK  V+ Q A F R GV  DW+NPYLT++ E EA  I   G++   G++Y+G 
Sbjct: 123 RQACRDYAKEQVEGQKADFIRMGVLGDWDNPYLTMNFETEAEIIRTLGKVIQNGHLYKGS 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL--LNEFLPDLGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F  VSA         L +    L   +W
Sbjct: 183 KPVHWCLDCASSLAEAEVEY-EDKVSPSIYVRFAAVSAAEVEEKFNALGKGQGALSAVIW 241

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA+L+Y +V++            N++              +I+A+
Sbjct: 242 TTTPWTLPSNRAIAVNAELEYQLVQL-----------GNER--------------VILAT 276

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV T++   G + + I  +  G DLE  R+ HP  +   P+++ GD++T + GTGLVHT
Sbjct: 277 ELVQTVQNALGIEQIQILGSAKGGDLELIRFNHPFYDFSVPMIL-GDHVTVDGGTGLVHT 335

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HGQ+D+V S KYGL +   V ++GKF      F+G  V  + N  V++ L E  +L+
Sbjct: 336 APDHGQDDFVVSKKYGLEMAGLVANDGKFISSTPFFAGKGVF-EANDLVLEKLKETGALL 394

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E    R  A+  I  V+W+P
Sbjct: 395 KLERIKHSYPHCWRHKTPIIFRATPQWFIGMETQDLRIKALSEIKSVRWIP 445



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 110/183 (60%), Gaps = 6/183 (3%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP +     GAD+LRLWV+S DYTG++ +  ++L    D YR++R T R+LL NL+ +  
Sbjct: 612 VPSEVWNKNGADILRLWVASTDYTGEIAVSHKILNSAGDTYRRIRNTARFLLANLNGFDP 671

Query: 629 GNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            N  ++ +++  +D++A+         I+E+Y++YQF  + Q + RF  +++ +FY D+ 
Sbjct: 672 KNDLVNPEEMISLDRWAVSCALEAQNEIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDII 731

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KDR YT    S  RRSCQT L     ++VR IAPIL   A+++W  LP     +  + AE
Sbjct: 732 KDRQYTTKADSLARRSCQTALWHISEALVRWIAPILSFTADEIWGYLP-----KLDNRAE 786

Query: 748 FVF 750
           FVF
Sbjct: 787 FVF 789


>gi|395242178|ref|ZP_10419177.1| Isoleucyl-tRNA synthetase [Lactobacillus pasteurii CRBIP 24.76]
 gi|394480539|emb|CCI85417.1| Isoleucyl-tRNA synthetase [Lactobacillus pasteurii CRBIP 24.76]
          Length = 925

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 207/469 (44%), Positives = 289/469 (61%), Gaps = 41/469 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANG 163
           + K T++L KT F MR N  VRE E  K W D+ ++ R    N G E F LHDGPP+ANG
Sbjct: 2   KIKETLNLGKTKFKMRGNLPVREAEWQKDWLDNDIYQRRLKLNQGHERFDLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPS 222
           N+HMGH+LNK+ KDII RYK ++ +   YVPGWD HGLPIE ++  Q +D   +K +  +
Sbjct: 62  NIHMGHSLNKVSKDIIVRYKGMRGFYAPYVPGWDTHGLPIEQQLAKQGVD---RKTMDRA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           K R    ++A+  +  Q A F R GV ADW++PY+TL PE+EA +I VFG+M  +GYIY+
Sbjct: 119 KYRELCHQYAEEQIAKQKADFMRLGVMADWDHPYITLQPEFEAEEIRVFGEMYKKGYIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           GKKPV+WS SS + LAEAE+EY +   + +IY  F++        G+L++   D    +W
Sbjct: 179 GKKPVYWSWSSESTLAEAEVEYKDVE-ANTIYVAFQVKDG----KGILDD---DTYFIIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+ VN K  Y VV++     GD                       +VA 
Sbjct: 231 TTTPWTIPANEAICVNPKFVYDVVKV-----GDKK--------------------YVVAD 265

Query: 403 DLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            L+ T+  + G     + K+L G++LE     HP+ +R+  ++I G ++T + GTGLVHT
Sbjct: 266 GLLTTVAEQIGWENYEVVKSLKGAELEYMTAKHPLFDRES-LLIEGLHVTLDGGTGLVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APG G++DY    KY LPI SPVD++GKFT+E  + +G+    D +  +VK L+E  +L+
Sbjct: 325 APGFGEDDYNVGKKYDLPIFSPVDNQGKFTDEIPELAGM-FYQDVDELMVKKLEEAKALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             +   H YP+DWRTKKP IFRAT QWFAS+  FRQ  +D I +  +VP
Sbjct: 384 KLKKIVHSYPHDWRTKKPVIFRATTQWFASISSFRQEILDEIEKTNFVP 432



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 98/166 (59%), Gaps = 6/166 (3%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+  D T DV +   +L Q ++ YRK+R T RY+L N  D+    N ++Y+D
Sbjct: 612 GAEIIRLWVAQADTTSDVAVSYDILNQAAESYRKIRNTFRYMLANTSDFEPATNRVAYED 671

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY   +L ++V +   +Y+ + F  +F+ +  FI  DLS FY D AKD LY    
Sbjct: 672 LRSVDQYMEVKLNDLVADCLAAYDKFDFNTVFKKVFNFISNDLSAFYLDFAKDVLYIEAA 731

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLED 742
            S  RRS QTV+    + + +++ PILPH  E++W     AY  ED
Sbjct: 732 DSKARRSMQTVIYDAAVKLDKILTPILPHTMEEIW-----AYLKED 772


>gi|355695425|gb|AES00006.1| isoleucyl-tRNA synthetase 2, mitochondrial [Mustela putorius furo]
          Length = 932

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 187/420 (44%), Positives = 255/420 (60%), Gaps = 26/420 (6%)

Query: 152 FVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL 211
           F LHDGPPYANG+ H+GHALNKILKDI NRY +++  K+ YVPGWDCHGLPIE+KV   L
Sbjct: 34  FCLHDGPPYANGDPHVGHALNKILKDIANRYHMMRGSKIHYVPGWDCHGLPIEIKVFSEL 93

Query: 212 DEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVF 271
              A+ +L+  ++R KA  FA+A +K Q ++F R+G+ ADWNN Y T D +YEA Q+ +F
Sbjct: 94  GGKAQ-NLSAVEIREKARSFAEAAIKKQRSAFIRWGIMADWNNCYYTFDRKYEAKQLRLF 152

Query: 272 GQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLN 331
            QM  +G IYR  KPV WSPSSRTALAEAELEY   HVSR+IY  F ++   P    L++
Sbjct: 153 YQMYEKGLIYRSYKPVFWSPSSRTALAEAELEYNPEHVSRAIYVKFPLLKPSPQLVSLID 212

Query: 332 EFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLK 391
              P +   +WTT PWT+PAN AV      +YAVV               K S+ G++  
Sbjct: 213 GSSP-VSFLIWTTQPWTIPANQAVCYMPDTKYAVV---------------KCSKSGDLY- 255

Query: 392 DQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYIT 451
                  I+A+D V  + +   T   +  T +G DLE     HP+   +   ++  +++T
Sbjct: 256 -------ILAADKVTAVASALETTFEVISTFSGVDLETGTCAHPLIPDKDSPLLPANHVT 308

Query: 452 TESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAV 510
              GTGLVHTAP HG EDY  + ++ LP    VD++G FT+ AG +     VL +G   V
Sbjct: 309 MTKGTGLVHTAPAHGMEDYSVASQHNLPTDCLVDEDGVFTDVAGPELQNKAVLEEGTDVV 368

Query: 511 VKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +K L     L+ EE   H YPYDWRTKKP + RA++QWF ++   +  A + + +VK++P
Sbjct: 369 IKMLQASKHLLKEEKLVHSYPYDWRTKKPVVIRASKQWFVNLTDIKATAKELLKKVKFIP 428



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 113/193 (58%), Gaps = 7/193 (3%)

Query: 571 PQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV-G 629
           P + P YGADVLR WV+  +   +V I P  L    D   KLR TLR+LLGN+  +    
Sbjct: 610 PNKEPPYGADVLRWWVAESNVFTEVTISPSALNAARDDISKLRNTLRFLLGNVAGFNPET 669

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
           +S+  +D+ +IDQY L  L+++   I +SY+ Y F K+ ++++ F   +LS+FYF + KD
Sbjct: 670 DSVPVNDMYVIDQYMLHLLQDLANKITDSYKQYDFGKVVRLLRAFYTRELSSFYFSIIKD 729

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 749
           RLY        RRSCQT  +  L  +VR +APILPHLAE+V+Q++P+A         + V
Sbjct: 730 RLYCENADDPKRRSCQTAFAEILDVVVRSVAPILPHLAEEVFQHIPYA------KEPKSV 783

Query: 750 FESKWPVLDEKWR 762
           F + W      W+
Sbjct: 784 FRTGWIRTSSIWK 796


>gi|116492940|ref|YP_804675.1| isoleucyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122265596|sp|Q03EY9.1|SYI_PEDPA RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|116103090|gb|ABJ68233.1| Isoleucyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 933

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 195/471 (41%), Positives = 282/471 (59%), Gaps = 41/471 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V E +   +W +++++ +    N+G+ +FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFKMRGNLPVNEQKREDIWAENKIYEQRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           N+HMGHA+NKI KDII RYK +  ++  +VPGWD HGLPIE    Q L ++   +K ++ 
Sbjct: 62  NIHMGHAMNKISKDIIVRYKSMSGFRSPFVPGWDTHGLPIE----QQLTKEGYDRKKMST 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           +  R    ++A   V  Q   FKR G+ A+W++PYLTL+PE+EA +I  FG+M+  G IY
Sbjct: 118 ADFRKLCHEYALKQVDKQRTDFKRLGISAEWDHPYLTLNPEFEAQEIRTFGRMAELGLIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RGKKPV WS SS +A+AEAE+EY +     + YA            G+L+E   +    V
Sbjct: 178 RGKKPVFWSWSSESAMAEAEVEYHDVTSPSAFYA-----EKVNDGKGVLDE---NTYFVV 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PA+  + ++A   Y+VV+           PA +  +             ++A
Sbjct: 230 WTTTPWTIPASEGITIDAGFDYSVVQ-----------PAGEDRK------------FVIA 266

Query: 402 SDLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           +D +     ++G + V   + + G +L+  + +HP DN +  VV+ GD++T +SGTGLVH
Sbjct: 267 TDRLNYAAEQFGWEDVQTLQVIRGRELDRIKAIHPFDNDRELVVMLGDFVTLDSGTGLVH 326

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAPG G++D+    +YGL I  PVDD G  T EAG  F G+    D N   +  L    +
Sbjct: 327 TAPGFGEDDFRVGKEYGLDIFVPVDDRGYMTAEAGPDFEGV-FYEDANAIALDKLKASNA 385

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ +  Y H YP+DWRTKKP IFRAT QWFASV+  R   ++AI  V+++P
Sbjct: 386 LLKQMDYVHSYPFDWRTKKPIIFRATPQWFASVDKIRDQILEAIEDVEFLP 436



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 102/167 (61%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP +     GA+++RLWVSS+D + DV +  +   + S+ Y+K+R T+RYLL N  D+  
Sbjct: 607 VPDEINKKMGAEIIRLWVSSIDSSSDVRVSQENFVKASESYKKIRNTVRYLLANTSDFDP 666

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N + Y++L   D+Y L Q   ++  IR SY++Y F  I++ +  +II DLS FY D A
Sbjct: 667 KENGVDYNELRPEDRYMLVQFNELISKIRTSYDNYDFIDIYKTLLNYIITDLSAFYLDFA 726

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RRS QTV    L+ + ++I PILPH AE++W+ L
Sbjct: 727 KDVVYIEPENSLKRRSMQTVFYKILVGLTKLITPILPHTAEEIWEYL 773


>gi|229815197|ref|ZP_04445533.1| hypothetical protein COLINT_02243 [Collinsella intestinalis DSM
           13280]
 gi|229809207|gb|EEP44973.1| hypothetical protein COLINT_02243 [Collinsella intestinalis DSM
           13280]
          Length = 942

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 199/486 (40%), Positives = 272/486 (55%), Gaps = 36/486 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T++LPKT F MRA    REPE  K W  + V+  +  KN+G E FVLHDGPPYANG 
Sbjct: 14  YKQTMNLPKTKFPMRAALAQREPERLKRWQQNHVYELMLKKNEGHEKFVLHDGPPYANGP 73

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKI KD+INRYK +Q Y+  YVPGWDCHG PIE KV   +  +     + +++
Sbjct: 74  IHLGHAMNKIAKDMINRYKAMQGYETPYVPGWDCHGQPIEHKVETQMGTEKFNQASTAEI 133

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    KFA   +  Q   FKR GV  DW+NPYLTL  +++AA IE F  M  +G +YRG 
Sbjct: 134 RELCNKFAVENIDLQREGFKRLGVLGDWDNPYLTLYHQHDAADIEAFKAMFDRGMVYRGH 193

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPVHW     TALAEAE+EY +   S SIY  F + S P      L  F   +   +WTT
Sbjct: 194 KPVHWCKHCHTALAEAEIEYAD-ETSPSIYVRFELTSKPAG----LESFDGPVDFVIWTT 248

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKD-QKKVFIIVASD 403
           TPWT+P++ AV++  +  Y  +E                 R   +LKD  +KV  I   D
Sbjct: 249 TPWTIPSDQAVSLKPEAIYTAIE--------------HDGRAEIMLKDLAEKVCGIAGWD 294

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + P +    G    +   +    L++  Y  PV +    V +  DY+ TE GTG+VH +P
Sbjct: 295 VTPVMVD--GKPYEVPAEV----LDHLHYKQPVFDGVEGVALLADYVGTEDGTGIVHNSP 348

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTE-----EAGKFSGLDVLGDGNVAVVKYLDEQM 518
           GHG +DY   +K G+ +  PVDD+G+F         G FSG+D   + N  ++++L ++ 
Sbjct: 349 GHGVDDYYVCMKEGMDVCMPVDDDGRFYNGDEFGAGGPFSGMDT-DEANPHIIQFLRDRG 407

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVPPQEAP 575
            L+ E    H YP+ WR K P +FRAT+QWF S++  G R+ A+D +   V W P     
Sbjct: 408 MLVAEVKITHSYPHCWRCKNPVLFRATDQWFVSMDKTGLREQALDQVRNHVSWYPEHAVN 467

Query: 576 GYGADV 581
             GA V
Sbjct: 468 RIGAMV 473



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 93/160 (58%), Gaps = 2/160 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW--RVGNSISYD 635
           GAD++RLWV+SVD + DV    ++L + SD YR+ R TLR+LL  L        + +++D
Sbjct: 643 GADIIRLWVASVDTSTDVACDHEILARTSDAYRRFRNTLRFLLSVLEGQFEPTTDGVAFD 702

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           +L  +D+  L +L  +   +  +YE ++F + ++ +  F++ +LSN Y D  KDRLY   
Sbjct: 703 ELMPLDKLMLARLTQVQAEVDAAYEGFEFNRAYRTLYDFVVTELSNVYLDALKDRLYCER 762

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
             S   RS QTV++  L  ++R + PIL +  ++  +  P
Sbjct: 763 PGSHEMRSAQTVVAELLSMLMRDLQPILSYTVDEAMEFAP 802


>gi|297205818|ref|ZP_06923213.1| isoleucine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297148944|gb|EFH29242.1| isoleucine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 960

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 191/474 (40%), Positives = 281/474 (59%), Gaps = 37/474 (7%)

Query: 100 KKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGP 158
           K++  R K T++L KT F MR N   RE E  K W++++++ +    N+G+  F LHDGP
Sbjct: 27  KEQSMRIKDTLNLGKTKFPMRGNLPNREGEWQKAWEENKLYEQRLKLNEGKPRFDLHDGP 86

Query: 159 PYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKK 217
           P+ANGN+HMGH+LNKI KDII RYK +  +   +VPGWD HGLPIE ++  Q +D   +K
Sbjct: 87  PFANGNIHMGHSLNKISKDIIVRYKNMSGFYAPFVPGWDTHGLPIEQQLAKQGVD---RK 143

Query: 218 DLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQ 277
            +  ++ R    K+A   +  Q   FKR GV ADWN+PY+TL P++EA +I VFG+M  +
Sbjct: 144 TMDRAEYRELCRKYAMEQIDKQRTDFKRLGVMADWNHPYITLQPKFEAEEIRVFGKMFEK 203

Query: 278 GYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDL 337
           GYIY+G KPV+WSPSS + LAEAE+EY +   S +IY  F++        G+L+    D 
Sbjct: 204 GYIYKGLKPVYWSPSSESTLAEAEVEYHDVK-SPAIYVAFQVEDG----KGILDN---DT 255

Query: 338 GLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVF 397
            + +WTTTPWT+P N  + VN K +Y+++++                        +++ F
Sbjct: 256 YMVIWTTTPWTIPVNVGITVNPKFEYSLIKVAG----------------------EERKF 293

Query: 398 IIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           +I  S L    E        +  T  G+D +     HP+ ++   +V+   Y+T E GTG
Sbjct: 294 VIGTSQLEKVAEDLDWQDYEVVDTFKGTDFDRMTVKHPLYDK-TSLVMNDTYVTAEDGTG 352

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVL-GDGNVAVVKYLDE 516
           LVH A G G++DY    KYGLP+ SP+DD+G++T++    + + V   D N  V K L+E
Sbjct: 353 LVHNATGFGEDDYNVGKKYGLPVYSPMDDQGRYTKDIPDPNLVGVFYDDANKMVTKQLEE 412

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           + +L+    + H YP+DWRTKKP I+RAT QWFASV+ FR   +  I +  + P
Sbjct: 413 KRALLKLSFFTHSYPHDWRTKKPVIYRATTQWFASVDAFRDQILAEIEKTNFTP 466



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 98/158 (62%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+S D T DV +   +L+Q ++ YRK+R TLRY+L N  D+    N ++Y D
Sbjct: 646 GAEIIRLWVASADTTSDVAVSKGILQQNAESYRKIRNTLRYMLANTSDFDPKANRVAYKD 705

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  IDQY    L  +VK+   +Y  + F  +++++ +FI  +LS FY D AKD LY  G 
Sbjct: 706 LRSIDQYMEVLLNKLVKDCLAAYNKFDFTNVYKMVFKFISNELSAFYLDFAKDVLYIEGE 765

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV+   L+ I +V+ PILPH  E+ W  L
Sbjct: 766 DSLPRRAMQTVIYDALVKITKVMTPILPHTMEEAWSYL 803


>gi|320165702|gb|EFW42601.1| isoleucyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 1078

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 188/453 (41%), Positives = 282/453 (62%), Gaps = 28/453 (6%)

Query: 141 LRVADKNDGEN--FVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDC 198
            +++  ND ++  F+LHDGPPYANG LH+GHA+NKILKDI+ R+K+L+  +V +VPGWDC
Sbjct: 106 FKLSQANDAKHPLFILHDGPPYANGQLHLGHAMNKILKDIVVRHKVLRGNRVHFVPGWDC 165

Query: 199 HGLPIELKVL-QSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYL 257
           HGLPIELK L  SL +    + TP++LR KAA+FA+  ++ Q   F  +GV  DW +PYL
Sbjct: 166 HGLPIELKALGDSLTKHV--EFTPAQLRTKAAQFAREAMEMQRKEFMSWGVLGDWQHPYL 223

Query: 258 TLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVF 317
           T+ P YEA Q++VF Q+  +  IYRG KPVHWSPS++TALAEAELEY + HVS + +  F
Sbjct: 224 TMTPSYEARQLQVFYQLYTKKLIYRGLKPVHWSPSTQTALAEAELEYQDNHVSVAAHVRF 283

Query: 318 RMVS--------------APPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQY 363
            + +              A       L++ L  + + VWTTTPWT+P+N A+A+N  L Y
Sbjct: 284 ELPANHKAALLQAANWQDAGAVDRAALSDNLA-VSMVVWTTTPWTIPSNQAIAINTSLDY 342

Query: 364 AVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLA 423
           +++ +   ++   A+P  K      +    +   I+VA+ LVP++   + T     K +A
Sbjct: 343 SLLHVTEAVQ--PASPGRKWLTQTIMPSRSRDQVILVATPLVPSIVQDFATAQSQVKQVA 400

Query: 424 ---GSDL--ENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 478
              G+ L     +  HP++  +   +I G ++T ++GTGLVHTAP HG +D++      +
Sbjct: 401 SISGASLLALGLQATHPLEAHRTVPIIHGSHVTADAGTGLVHTAPAHGVDDFIVCKTNNI 460

Query: 479 PILSPVDDEGKFTEE-AGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTK 537
           P+L+ VD+ G +  + A   +GL VL  GN  V++ L++   L++ +P +H+YPYDWR+K
Sbjct: 461 PLLNLVDERGCYKADVAHGLAGLQVLTVGNAKVLELLEQADRLLLAKPLKHRYPYDWRSK 520

Query: 538 KPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           KP I  AT+QWFAS+   +  A+ AI  V+ VP
Sbjct: 521 KPVITLATKQWFASLTNVKHDALQAILGVELVP 553



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 98/158 (62%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS-ISYDD 636
           G DVLR W +S DY+ DV+I    ++  + I +K+R T RYLLGNLHD+      +    
Sbjct: 758 GTDVLRAWAASADYSADVVISKDAIKAQTQIVKKIRNTFRYLLGNLHDFDPAKHLVPLAS 817

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L ++D+  L +   +  ++++ YESY F +    I  F  V+LS FYF+++KDRLY  G 
Sbjct: 818 LRLVDRVVLQRTSALWDSVQQGYESYAFARASLAITTFCNVELSGFYFELSKDRLYAAGA 877

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTVL   +++I + +AP+L HLA++VW +L
Sbjct: 878 ESPERRAAQTVLYHAVVTICKAVAPVLCHLADEVWSHL 915


>gi|309778072|ref|ZP_07673011.1| isoleucine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914166|gb|EFP59967.1| isoleucine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 908

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 196/467 (41%), Positives = 272/467 (58%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR     +EP   K W +  ++ ++ +  +G E FVLHDGPPYANG+
Sbjct: 3   YKDTLLMPKTKFEMRGKLPTKEPNFQKRWKESDIYEKMLENREGCEAFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKD+I R + +  YKV Y+PGWD HGLPIE   +Q L  + +K++  S  
Sbjct: 63  IHLGHALNKILKDVIVRNRYMAGYKVPYIPGWDTHGLPIE-TAIQKLGHN-RKEMELSDF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A   V+ Q   F   GV  D+++PY+TL  ++EA QIE+F  M+L G IY+G 
Sbjct: 121 RKLCYDYALEQVERQKKGFLSLGVVGDYDHPYITLTKDFEAHQIEIFASMALDGLIYKGL 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS TALAEAE+EY +   S +I+  F +        G+L+    D    +WTT
Sbjct: 181 KPVYWSPSSETALAEAEIEYKDIK-SPTIFVKFPVKDG----KGVLD---SDTSFVIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  + +N    YA+VE                          +K  +IV  +L
Sbjct: 233 TPWTIPANLGICLNKDYTYALVE-------------------------SEKGKLIVLEEL 267

Query: 405 VPTLEAKWGTKLVIK-KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  L  K+G +   K  T  GS+LE     HP+ +R+  V++G D++T ++GTG VHTAP
Sbjct: 268 VNALWEKFGLERKEKLATFKGSELEMITCQHPLYDRESLVMLG-DHVTADAGTGCVHTAP 326

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           G G +D+    KYGLP    VD+ G   E+AG +     + D N  V + LDE  +L+  
Sbjct: 327 GFGADDFFIGQKYGLPAYCNVDEHGCMMEDAGDWLKGQYVDDANKTVTQRLDELGALLKL 386

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           E   H YP+DWRTKKP IFRAT QWFAS++  R+  +  I  V W+P
Sbjct: 387 EFITHSYPHDWRTKKPIIFRATTQWFASIDKIREQLLTEIANVDWIP 433



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 96/165 (58%), Gaps = 8/165 (4%)

Query: 574 APG-----YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH---D 625
           APG     YGAD+LRLW +SVDY  D  +  ++L+Q+S+ YRK+R T R++L N++   D
Sbjct: 603 APGEITKKYGADILRLWATSVDYQADCSMSDEILKQISEQYRKVRNTFRFMLANVNPDED 662

Query: 626 WRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFD 685
           +   + +   +LP +DQY L  L  + +   ++Y+ Y+F  I  ++   +  +LS +Y D
Sbjct: 663 FTKDDLVDIHELPELDQYILVLLNEVNERAVKAYKEYRFADITNMLSNLMTNELSAYYMD 722

Query: 686 VAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
             KD LY     S  RR  QTVL   +  +VR+ APIL H  E+V
Sbjct: 723 YTKDILYIEKKDSLRRRQVQTVLWHAINVLVRLWAPILVHTCEEV 767


>gi|442804071|ref|YP_007372220.1| isoleucine--tRNA ligase IleS [Clostridium stercorarium subsp.
           stercorarium DSM 8532]
 gi|442739921|gb|AGC67610.1| isoleucine--tRNA ligase IleS [Clostridium stercorarium subsp.
           stercorarium DSM 8532]
          Length = 953

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 200/467 (42%), Positives = 283/467 (60%), Gaps = 31/467 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           Y  T++LPKT F MRAN   +EPEI K W ++ ++ +   +N+G   FVLHDGPPYANG+
Sbjct: 37  YGQTLNLPKTDFPMRANLPQKEPEIMKSWYENDIYNKRLKRNEGHPKFVLHDGPPYANGD 96

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G ALNK+LKDII RY  ++ Y   YVPGWD HGLP E + +  L  + + ++ P K 
Sbjct: 97  IHLGTALNKVLKDIIVRYYDMKGYYAPYVPGWDTHGLPTENRAIDELGLN-RHEVGPVKF 155

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R      A+  +  Q  SFKR GV  DW +PY+TL P++EA QIEVFG+M+ +G IY+G 
Sbjct: 156 RTACEGIARKYIDIQRESFKRLGVVGDWEHPYITLLPQFEAKQIEVFGKMAERGCIYKGL 215

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           +PV+W P   TALAEAE+EY E   ++SIY  F +        G+++  L +  + +WTT
Sbjct: 216 RPVYWCPCCETALAEAEIEYME-EKNQSIYVKFALKDDKGKLKGIVDS-LDNTYIVIWTT 273

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           T WT+P N A+AVN    YAV+                  + GN      + +I+     
Sbjct: 274 TTWTLPGNVAIAVNPDFVYAVI------------------KAGN------ENYIMAKELA 309

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
             T++        I   L G+++E     HP  +R   +VI GD++T ++GTG VHTAPG
Sbjct: 310 EATMKVAGIENYSIIGELTGAEMEYMVCRHPFLDRD-SLVITGDHVTLDAGTGCVHTAPG 368

Query: 465 HGQEDYVTSLKY-GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           HG ED+    KY GL ++ PVD +G  TEEAG+F+GL      N  + K+L E  +L  +
Sbjct: 369 HGVEDFEVCRKYEGLKVIVPVDGKGVLTEEAGQFAGL-TYKQANKEIFKHLKETGALFAD 427

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +  EH+YP+ WR K+P +FRATEQWF SVE F++ A++AI QV+W+P
Sbjct: 428 QVIEHQYPHCWRCKQPILFRATEQWFISVESFKKEALEAIKQVRWIP 474



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 122/203 (60%), Gaps = 7/203 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS-ISYD 635
           YGAD+LRLWV+S DY  D+ I   +++Q+++ YRK+R T R++LGN+ D+      + Y+
Sbjct: 653 YGADILRLWVASSDYKTDIRISNDIIKQLAENYRKIRNTARFILGNISDFDPETMMVPYN 712

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           ++  ID++AL +L  +++ + +++  Y+F      +  F +VD+SNFY DV KDRLY   
Sbjct: 713 EMEEIDKWALMRLNGLIRKVEDAFSQYEFHSFTHNVHNFCVVDMSNFYLDVLKDRLYVSS 772

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
                RRS QT +   L S+VR++APIL   +E++W+ LP       G   E +  + WP
Sbjct: 773 PDDKKRRSAQTAMYIILDSLVRLLAPILAFTSEEIWKYLPH----RKGDNPESIQLNSWP 828

Query: 756 VLDEKWRTFPVGEIYFWGKILEV 778
           V++ ++     G    W +++E+
Sbjct: 829 VVNPEYDN--PGLEQKWNRLIEI 849


>gi|410464474|ref|ZP_11317904.1| isoleucyl-tRNA synthetase [Desulfovibrio magneticus str. Maddingley
           MBC34]
 gi|409982406|gb|EKO38865.1| isoleucyl-tRNA synthetase [Desulfovibrio magneticus str. Maddingley
           MBC34]
          Length = 940

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 205/475 (43%), Positives = 276/475 (58%), Gaps = 44/475 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVF-LRVADKNDGENFVLHDGPPYANGN 164
           YK T+ LP+T+F M+AN   +EPE  K W +  V+   +A + +   ++LHDGPPYANG+
Sbjct: 5   YKKTLRLPQTSFPMKANLREKEPETLKYWAEQGVYQAMLAARENAPRYILHDGPPYANGH 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKDII + + L  ++  YVPGWDCHGLPIE KV Q L    K++L    +
Sbjct: 65  LHMGHALNKILKDIIVKSRHLAGFQAPYVPGWDCHGLPIEHKVSQELKAKGKENLPAVTV 124

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A   V  Q   FKR GV+ DW++PYLT+ P YE+A           G +YRGK
Sbjct: 125 RRLCRDYATKFVDIQRKEFKRLGVFGDWDDPYLTMRPSYESATALALCDFVENGSVYRGK 184

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP--DLGLA-- 340
           KP+HW  S +TALAEAE+EY +  VS S+Y  F      P T   L +  P  D G A  
Sbjct: 185 KPIHWCLSCQTALAEAEVEYAD-EVSPSVYVRF------PLTDPKLKDVFPMADPGKAYA 237

Query: 341 -VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+P N AVA++ +  YA+V       GDS                      +
Sbjct: 238 VIWTTTPWTLPDNMAVALHPEFTYALVA-----AGDSQ--------------------YV 272

Query: 400 VASDLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A +L+  +   +G T   +     G+ LE     HP  +R  P+V   DY+T ++GTGL
Sbjct: 273 LALELLDAVRELFGWTDATVLAEAPGAALEGLAARHPFYDRPSPIVT-ADYVTLDAGTGL 331

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQM 518
           VHTAPGHG+EDY T L+ GL ILSP+DD G+F +    F+GL V  + N  V++ L E  
Sbjct: 332 VHTAPGHGREDYDTGLRNGLDILSPLDDAGRFLDVVPYFAGLTVW-EANPKVIEKLTEVG 390

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAI-GQVKWVP 570
            L+  +  +H YP+ WR K+P IFRAT QWF ++E    RQ A+ AI   V+W+P
Sbjct: 391 HLLASKKLKHSYPHCWRCKEPVIFRATTQWFIAMEAGELRQKALSAIENDVEWIP 445



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 102/165 (61%), Gaps = 2/165 (1%)

Query: 571 PQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-V 628
           PQE    +GA++LRLW S+VDY  D+ I  ++L ++ + YR++R T R++LGNL D+   
Sbjct: 620 PQEIIDKHGAEILRLWTSAVDYRDDIRISEEILARLVEAYRRIRNTCRFILGNLSDFDPA 679

Query: 629 GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            + ++  DL  +D+YAL  +    + + E+YE+Y+F K+F  +    + DLS FY D+ K
Sbjct: 680 AHDVAPADLLPLDRYALDAVAAGHQRMAEAYEAYEFHKVFHTLHNLCVTDLSAFYLDILK 739

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQN 733
           DRLY    +S  RRS Q  L   L  ++  +APIL   AE+V+++
Sbjct: 740 DRLYVSAGSSHERRSAQAALWRILRVLLLDMAPILSFTAEEVFRH 784


>gi|120553794|ref|YP_958145.1| isoleucyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|166229746|sp|A1TYY9.1|SYI_MARAV RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|120323643|gb|ABM17958.1| Isoleucyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 939

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 194/471 (41%), Positives = 283/471 (60%), Gaps = 32/471 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YKHT++LP+T F MR N   REP++ K W D  V+  +  +  G E F+LHDGPPYANG+
Sbjct: 4   YKHTLNLPETAFPMRGNLAKREPDMLKHWQDLNVYGNLRKQRQGREKFILHDGPPYANGS 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKD+I + +    Y   YVPGWDCHGLPIE KV Q + +   K +     
Sbjct: 64  IHIGHAVNKILKDMIVKSRSFMGYDAPYVPGWDCHGLPIEHKVEQEIGKAGVK-VDYKTF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A   ++ Q   F R GV  +W+ PYLT+DP+ EA  +   G++  +G++ RG 
Sbjct: 123 RQACRDYATKQIEGQKTDFIRLGVMGEWDKPYLTMDPKVEAGIVRALGKIVAKGHLVRGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMV--SAPPSTSGLLNEFLPDLGLAVW 342
           KPV+WS   ++ALAEAE+EY +   S  I   F +V   A   T G  +E   D+ L +W
Sbjct: 183 KPVYWSVVGQSALAEAEVEYQD-KTSTQIDVRFTVVDRDAVLKTFG-TSEGEGDVSLVIW 240

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN AV++ A ++YA+V++      D    A +               +I+A+
Sbjct: 241 TTTPWTIPANQAVSIGADIEYALVQV------DVGHGAER---------------MILAT 279

Query: 403 DLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           D+V  + A+WG +   +    AGS LEN    HPV ++Q PV++ GD+++ ++GTG VHT
Sbjct: 280 DMVQGIMARWGVEDYKVLANAAGSALENQLLHHPVYDKQVPVLL-GDHVSLDAGTGAVHT 338

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG ED+V   +YG+  L+ V  +G +T+ AG+F+G+ V    +  V   L+ +  L+
Sbjct: 339 APDHGMEDFVVGKEYGIGTLNLVKADGTYTDAAGEFAGVHVY-KADEPVCAALEREGKLV 397

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E + H YP+ WRTK P I+RAT QWF S++    R  A++AI  V+WVP
Sbjct: 398 RSEKFRHSYPHCWRTKTPLIYRATPQWFISMDKLNLRADALEAIKGVRWVP 448



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 107/188 (56%), Gaps = 9/188 (4%)

Query: 569 VPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 627
           + PQE     GAD+LRLWVS+ DY+G++ +   +LRQ +D YR++R T R+LL NL  + 
Sbjct: 614 IAPQEVMNELGADILRLWVSATDYSGEMSVSKDILRQTADGYRRIRNTARFLLSNLTGFD 673

Query: 628 VG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
              + ++ +D+  +D++ + +   +   + E Y +Y F +I+Q +  F    L  FY D+
Sbjct: 674 PDQHMVAPEDMIALDRWMVDRALQLQNELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDI 733

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 746
            KDR YT    S  RRSCQT L     ++VR IAPIL   A+++WQ+LP       G   
Sbjct: 734 IKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADEIWQHLP-------GKRG 786

Query: 747 EFVFESKW 754
           + VF   W
Sbjct: 787 DTVFYETW 794


>gi|189485620|ref|YP_001956561.1| isoleucyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287579|dbj|BAG14100.1| isoleucyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 929

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 200/533 (37%), Positives = 305/533 (57%), Gaps = 51/533 (9%)

Query: 99  EKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDG 157
           +KK+E  Y  TV+LPKT F M+A+   +EP   + WD  ++++++ +KN D E F+ HDG
Sbjct: 2   DKKKE--YSKTVNLPKTDFQMKADLAYKEPVFIEEWDRERLYVKICEKNKDKEKFIFHDG 59

Query: 158 PPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKK 217
           PPYAN N+H+G  LNK+LKD I +Y+ +    V + PGWDCHGLPIE  VL+ +  D  K
Sbjct: 60  PPYANANIHIGTGLNKVLKDFIIKYRSMSGNYVPFTPGWDCHGLPIEQLVLKEMKTDKSK 119

Query: 218 DLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQ 277
            +     R +AA FA   V+ Q + FKR GV ADW++PYLTLDP+YE   ++VFG +  +
Sbjct: 120 -VDRVVFRKQAADFASKFVEIQKSEFKRLGVIADWDHPYLTLDPKYEMFIVKVFGDLVEK 178

Query: 278 GYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPP--STSGLLNEFLP 335
           G+IYR KKPV+W P+  TA+A+AE+EY + + S SI+  F+++  P    T  +L   L 
Sbjct: 179 GFIYRKKKPVYWCPTCETAMADAEVEYSD-YSSDSIFVKFQIILLPEPFKTKEIL---LK 234

Query: 336 DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
           D  + +WTTTPWT+PAN A+A N + +YA    +                     +D ++
Sbjct: 235 DFSVLIWTTTPWTLPANVALAFNKESEYAAAVYK--------------------FEDSRE 274

Query: 396 VFIIVASDLVPTLEAKW-GTKLVIKKTLAGSDLENCRYVHP-VDNRQCPVVIGGDYITTE 453
             +IVA  L   ++ K       I     G D  + +  +P V++RQ   ++ G +++ E
Sbjct: 275 EKLIVAKALAENVKDKIKAVSFEIVWEAKGIDFVSLKCRNPLVEDRQSQGIVAG-FVSIE 333

Query: 454 SGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKY 513
            GTG+VH APGHGQEDY   L+YGL I+SPV+D+G +T+E  +F  + +    N  ++  
Sbjct: 334 DGTGIVHIAPGHGQEDYQAGLEYGLEIISPVNDKGLYTKEVPEFENIHIY-KANPLIIGK 392

Query: 514 LDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPP 571
           LD +  ++ +    H YP+ WR   P IFRAT QWF SVE    R+  ++A+  V+W+P 
Sbjct: 393 LDREGKILAKLRLTHSYPHCWRCGNPIIFRATPQWFLSVEHNDLRKKLLEAVKTVRWIPE 452

Query: 572 ----------QEAPGYGADVLRLW-----VSSVDYTGDVMIGPQVLRQMSDIY 609
                     +  P +     RLW     V      G+ ++  +V+ ++S ++
Sbjct: 453 YGENRITAMLEGRPDWCLSRQRLWGVPIPVFYCKECGEPLLDSKVIDKISALF 505



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 117/202 (57%), Gaps = 5/202 (2%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD 636
           YGADV+RLW++S DY  D+ I  +++R +SD YRK+R T+R+LLGN+ D+ +  ++ + D
Sbjct: 634 YGADVVRLWIASSDYKEDIRISDEIIRGLSDTYRKIRNTIRFLLGNIGDFDLKKALPFKD 693

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +   D+YAL +L+ ++     +YESY+F K    I  F  V LS FY DV KD LY    
Sbjct: 694 MQETDKYALSRLQQLISISLAAYESYEFHKAAAAIGNFCTVFLSGFYLDVLKDVLYCDKK 753

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPV 756
               R+S Q+ +      I+R+I+PIL   AE+ W+ L  A  L D   + F+ +  +PV
Sbjct: 754 DGIERKSAQSAMLKICSVIIRLISPILSFTAEEAWREL--AKLLYDVPQSVFLLD--FPV 809

Query: 757 LDEKWRTFPVGEIYFWGKILEV 778
            D K+       +  W KIL V
Sbjct: 810 TDSKY-VLHAETLEKWEKILYV 830


>gi|206890484|ref|YP_002248496.1| isoleucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742422|gb|ACI21479.1| isoleucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 915

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 198/470 (42%), Positives = 276/470 (58%), Gaps = 39/470 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKND---GENFVLHDGPPYAN 162
           YK T++LP+T F M+AN   REP I K W +H+V+  + +KN    G+ F+LHDGPPYAN
Sbjct: 5   YKDTLNLPQTGFPMKANLAEREPAILKFWKEHRVYENLENKNKSLGGKCFILHDGPPYAN 64

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G++H+GHALNKILKDII +Y  +      +VPGWDCHGLPIEL+V +SL ++ K+++   
Sbjct: 65  GHIHIGHALNKILKDIIVKYHSMLGQYSPFVPGWDCHGLPIELQVDKSLGKE-KENIDIF 123

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           K R    ++A+  +  Q   F R GV+  W+ PY+T+  EYEA  ++ F      GY+YR
Sbjct: 124 KKRQLCREYAEKFINIQRDEFIRLGVFGYWDEPYITMSNEYEATIVKEFLSFVKNGYVYR 183

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           GKKPV+W PS  TALA+AE+EY +   S SI+  F ++        + NE    L + +W
Sbjct: 184 GKKPVYWCPSCVTALADAEVEYADKE-SPSIFVAFEVIDR--DRFSVKNE---PLYIVIW 237

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+AV+    Y  V                        K  K + +IV  
Sbjct: 238 TTTPWTLPANLALAVHPDFDYVGV------------------------KSSKGILVIV-K 272

Query: 403 DLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           + +  L+ K          + GS LE  +  HP  +R   VV+  D++ T  GTG+VH A
Sbjct: 273 EAIKNLKDKIDIDETPLFEIKGSKLEGIKAKHPFIDRVSKVVV-ADFVETGEGTGVVHIA 331

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG EDY   LKYG  I +PVDD+G+FTE+   F+G +V    N A+++++ E  SLI 
Sbjct: 332 PGHGDEDYEVGLKYGFDIYAPVDDKGRFTEDVPYFAGENVF-KANKAIIEHMKENGSLIW 390

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASV--EGFRQAAMDAIGQVKWVP 570
           E    H YP+ WR KKP IFRAT QWF S+  +  R  A+  I +V+W+P
Sbjct: 391 EGKITHSYPHCWRCKKPIIFRATTQWFISMSHKDLRHRALQEIDKVRWIP 440



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 86/230 (37%), Positives = 142/230 (61%), Gaps = 16/230 (6%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    ++G V  + PQE     GAD++RLWVS+ DY  D+ +  ++L+++++ Y
Sbjct: 594 TVDGQGRKMSKSLGNV--ISPQEIIKSNGADIVRLWVSAEDYRDDIKLSQEILQRLTEAY 651

Query: 610 RKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           RK+R TLRYLLGN++D+   +    D L  ID++A+ +L+ ++  +R +YE+++F ++F 
Sbjct: 652 RKIRNTLRYLLGNIYDYDAKDYT--DQLLEIDRWAMMRLQKLIGKVRLAYENFEFHQVFH 709

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            I  F + D+S FY D+ KDRLYT  + S  RR+ Q VL     S++++IAPIL   AE+
Sbjct: 710 AIYNFCVTDMSAFYLDILKDRLYTFKSDSPERRAAQWVLYNIADSLIKLIAPILSFTAEE 769

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYF-WGKILEV 778
            WQ+LPF  T       E VF  + P ++E   +F   E+   W K++E+
Sbjct: 770 AWQHLPFKKT-------ESVFLDRMPEIEE---SFIDEELQLKWEKLIEI 809


>gi|346310608|ref|ZP_08852623.1| isoleucyl-tRNA synthetase [Collinsella tanakaei YIT 12063]
 gi|345897563|gb|EGX67480.1| isoleucyl-tRNA synthetase [Collinsella tanakaei YIT 12063]
          Length = 934

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 204/485 (42%), Positives = 272/485 (56%), Gaps = 34/485 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T++LPKT F MRA     EP   K W D+ V+ ++  KN+G + FVLHDGPPYANG 
Sbjct: 5   YKKTMNLPKTAFPMRAGLAKSEPVRLKGWQDNHVYEQLMKKNEGHDKFVLHDGPPYANGP 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKI KDIINRY+ +Q Y+  YVPGWDCHG PIE KV + L  +        K+
Sbjct: 65  IHLGHAMNKISKDIINRYRSMQGYQTPYVPGWDCHGQPIEHKVEEMLGTEKFNQTPVDKI 124

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    KFA   +  Q   FKR GV  DW+NPYLTL  +++AA IEVF +M   G IYRG 
Sbjct: 125 RELCNKFAVENIDLQREGFKRLGVLGDWDNPYLTLYHQHDAADIEVFKEMFDAGMIYRGH 184

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPVHW     TALAEAE+EY +   S SIY  F M S P   +GL N F   +   +WTT
Sbjct: 185 KPVHWCKHCHTALAEAEIEYGD-ETSPSIYVRFEMTSKP---AGLEN-FDGPVDFVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P++ AV++  +  Y  VE +   E         KS    V +     +  V  D 
Sbjct: 240 TPWTIPSDQAVSLKPEAIYVAVEHEGRAE------IMMKSLAEQVCEIAGWEYSPVMVDG 293

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
            P               +     ++  Y  PV +    V +  DY+ TE GTG+VH +PG
Sbjct: 294 KPY-------------EVPAETFDHLHYKQPVFDGVEGVALLADYVGTEDGTGIVHNSPG 340

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFT-----EEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HG +DY   LK G+ I  PVDD+G+F         G FSG+D   + N  ++++L E+ +
Sbjct: 341 HGVDDYYVCLKEGMDICMPVDDDGRFYVGEDFGTGGPFSGMDT-DEANPHIIEFLRERGT 399

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVPPQEAPG 576
           L+ E+   H YP+ WR K P +FRAT+QWF S++  G R+ A+D +   V W P   +  
Sbjct: 400 LVAEKKITHSYPHCWRCKNPVLFRATDQWFVSMDKTGLRETALDQVKNHVAWYPEHASNR 459

Query: 577 YGADV 581
            GA V
Sbjct: 460 IGAMV 464



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 107/193 (55%), Gaps = 2/193 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHD--WRVGNSISYD 635
           GAD++RLWVSSVD + DV    ++L + SD YR+ R TLR+LL  L D      +++S  
Sbjct: 634 GADIVRLWVSSVDTSTDVACDHEILARTSDAYRRFRNTLRFLLSVLEDDFEPERDAVSIA 693

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           DL  +D+  L +L  +   +  +YE Y+F ++++++  F++ +LSN Y D  KDRLY  G
Sbjct: 694 DLMPLDKLMLARLTQVQAEVDAAYERYEFNRVYRVLYDFVVTELSNVYLDALKDRLYCDG 753

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             S +RRS QTVL+  L  ++R + PIL +  ++     P +       AA   +     
Sbjct: 754 VDSVSRRSAQTVLAELLSMLMRDLQPILSYTVDEAMAFAPRSLVDNQTYAAMLDWYRSPL 813

Query: 756 VLDEKWRTFPVGE 768
            +DE     PV E
Sbjct: 814 SMDEASHLLPVLE 826


>gi|315041789|ref|XP_003170271.1| isoleucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311345305|gb|EFR04508.1| isoleucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 1012

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 205/482 (42%), Positives = 277/482 (57%), Gaps = 45/482 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+TF  R  AL  + +  K   D     +  ++     F LHDGPPYANG+L
Sbjct: 12  WSSTLKLPKSTFPPRI-ALADQSKYLKRCSDDLYSWQQRNRPATATFTLHDGPPYANGDL 70

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDE-----DAKKDLT 220
           H+GHALNKILKDII R +L +  +V YVPGWDCHGLPIELK LQ   E      A +D  
Sbjct: 71  HIGHALNKILKDIICRVQLAKGKRVHYVPGWDCHGLPIELKALQGQKELGDLRSAGRD-G 129

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
            +++R+ A + A+ TV  QM  F+ + +  DW+N Y T++ ++E  Q+ VF +M  +G I
Sbjct: 130 AAQIRSAARQLAEKTVSQQMEGFRNWAIMGDWDNAYTTMNKDFERRQLAVFLEMVEKGLI 189

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL--PDLG 338
           YR  KPV+WSPSS TALAEAELEY E H+S +    F +   P       N  L   D+ 
Sbjct: 190 YRRYKPVYWSPSSGTALAEAELEYKEDHISTAALVKFVLDDLPAQV--WENSLLVGNDIS 247

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
             +WTTTPWT+PANAA+AVN   +Y +V                 +R G +L  Q ++  
Sbjct: 248 AVIWTTTPWTLPANAALAVNPDFEYTIV---------------YSARHGKLLVAQSRL-- 290

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVH----PVDNRQCPVVIGGDYITTES 454
                L   LE  +    V+   + GS+L N  Y      P   +Q   +I  D++T ++
Sbjct: 291 ---QYLEELLEDHF---TVVVPVVMGSELLNSTYRSLFKGPESEKQ--RIIAADFVTADA 342

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTE-----EAGKFSGLDVLGDGNVA 509
           G+G+VH APGHG EDY   L  G+P  +PVD EG++T      +    +G  VLGDGN A
Sbjct: 343 GSGIVHCAPGHGMEDYEACLALGIPAYAPVDGEGRYTRFAMPSQPDLLTGKAVLGDGNHA 402

Query: 510 VVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
           V+KYL E   LI +  Y+HKYPYDWR+K P I RATEQWFA V   R  A+ A+  V+++
Sbjct: 403 VIKYLSENGILIHKHAYKHKYPYDWRSKLPVIIRATEQWFADVGDIRGEAIQALQSVQFI 462

Query: 570 PP 571
           PP
Sbjct: 463 PP 464



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 101/189 (53%), Gaps = 10/189 (5%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
           G D LRLW +  DYT DV+IG QVL+ ++    K R T + LLG L D+   N + Y+ L
Sbjct: 678 GPDALRLWAAGSDYTKDVVIGQQVLKAVNISLHKFRVTFKLLLGALQDFDPKNEVPYESL 737

Query: 638 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
              D+ AL QL N+VK  +E+ +  +FFK    + ++  ++ S FY +  KDRLY    +
Sbjct: 738 HATDKIALVQLHNLVKTSQEAVDKMEFFKAVTAMNKWANLEFSAFYIEAIKDRLYADSGS 797

Query: 698 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV---FESKW 754
             +RR+ QT L      +  ++ PI+P L E+ W++ P       G+   F+   F+  +
Sbjct: 798 GISRRAAQTTLFHIYTHVQGLLGPIVPLLIEETWEHTP-------GNIKGFLKHPFQRTF 850

Query: 755 PVLDEKWRT 763
              D KW+ 
Sbjct: 851 KSPDSKWKN 859


>gi|421894305|ref|ZP_16324795.1| isoleucyl-tRNA synthetase [Pediococcus pentosaceus IE-3]
 gi|385272849|emb|CCG90167.1| isoleucyl-tRNA synthetase [Pediococcus pentosaceus IE-3]
          Length = 933

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 195/471 (41%), Positives = 281/471 (59%), Gaps = 41/471 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  V E +   +W +++++ +    N+G+ +FVLHDGPPYANG
Sbjct: 2   RVKDTLNLGKTKFKMRGNLPVNEQKREDIWAENKIYEQRQKLNEGKPSFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTP 221
           N+HMGHA+NKI KDII RYK +  ++  +VPGWD HGLPIE    Q L ++   +K ++ 
Sbjct: 62  NIHMGHAMNKISKDIIVRYKSMSGFRSPFVPGWDTHGLPIE----QQLTKEGYDRKKMST 117

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
           +  R    ++A   V  Q   FKR G+ A+W++PYLTL+PE+EA +I  FG+M+  G IY
Sbjct: 118 ADFRKLCHEYALKQVDKQRTDFKRLGISAEWDHPYLTLNPEFEAQEIRTFGRMAELGLIY 177

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RGKKPV WS SS +A+AEAE+EY +     + YA            G+L+E   +    V
Sbjct: 178 RGKKPVFWSWSSESAMAEAEVEYHDVTSPSAFYA-----EKVSDGKGVLDE---NTYFVV 229

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PA+  + ++A   Y+VV+           PA +  +             ++A
Sbjct: 230 WTTTPWTIPASEGITIDAGFDYSVVQ-----------PAGEDRK------------FVIA 266

Query: 402 SDLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           +D +     ++G + V   + + G +L+  + +HP DN +  VV+ GD++T +SGTGLVH
Sbjct: 267 TDRLNYAAEQFGWEDVQTLQVIRGRELDRIKAIHPFDNDRELVVMLGDFVTLDSGTGLVH 326

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVVKYLDEQMS 519
           TAPG G++D+    +YGL I  PVDD G  T EAG  F G+    D N   +  L    +
Sbjct: 327 TAPGFGEDDFRVGKEYGLDIFVPVDDRGYMTAEAGPDFEGV-FYEDANAIALDKLKASNA 385

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L+ +  Y H YP+DWRTKKP IFRAT QWFASV+  R   + AI  V+++P
Sbjct: 386 LLKQMDYVHSYPFDWRTKKPIIFRATPQWFASVDKIRDQILKAIEDVEFLP 436



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 102/167 (61%), Gaps = 1/167 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP +     GA+++RLWVSS+D + DV +  +   + S+ Y+K+R T+RYLL N  D+  
Sbjct: 607 VPDEINKKMGAEIIRLWVSSIDSSSDVRVSQENFVKASESYKKIRNTVRYLLANTSDFDP 666

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N + Y++L   D+Y L Q   ++  IR SY++Y F  I++ +  +II DLS FY D A
Sbjct: 667 KENGVDYNELRPEDRYMLVQFNELISKIRASYDNYDFIDIYKTLLNYIITDLSAFYLDFA 726

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
           KD +Y     S  RRS QTV    L+ + ++I PILPH AE++W+ L
Sbjct: 727 KDVVYIEPENSLKRRSMQTVFYEILVGLTKLITPILPHTAEEIWEYL 773


>gi|303230916|ref|ZP_07317660.1| isoleucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514429|gb|EFL56427.1| isoleucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 944

 Score =  358 bits (920), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 199/484 (41%), Positives = 285/484 (58%), Gaps = 50/484 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFL-RVADKNDGENFVLHDGPPYANGN 164
           Y  T+ LP+T F MR N   REPEI K W+DH+++  R+  + D + F+LHDGPPYANG 
Sbjct: 3   YGKTLHLPETEFPMRGNLPKREPEILKFWEDHKIYQKRLELRKDAKPFILHDGPPYANGK 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHALNK LKDII +YK +  +  RY+PGWD HGLPIE  V+++   + + ++ P  L
Sbjct: 63  LHIGHALNKTLKDIIMKYKTMTGHYTRYIPGWDTHGLPIEHAVIKNTGLN-RHEMAPLDL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R+GV  +W  PYLTL PE+E  Q+ +FG+M+ +G+IY+G 
Sbjct: 122 RNKCKEYALECVENQKQDFIRFGVLGEWERPYLTLRPEFEVKQLGIFGEMAKRGHIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV-WT 343
           K V+W     TALAEAE+EY E   S SIY  F  VS    T  L     P    +V WT
Sbjct: 182 KTVYWCTHCETALAEAEIEYAEKK-SFSIYVKFPYVSEKKVT--LPAGVDPKQAYSVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A++VN +L+Y  V++     GD                     + ++A++
Sbjct: 239 TTPWTMPANVAISVNPELEYGWVKV-----GDE--------------------YYLMATE 273

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV       G +   I    +G+DLE   + HP   R    V+ GD++T E+GTG VHTA
Sbjct: 274 LVDAAMKDIGIEDYEIVNRFSGADLELAEFKHPFVERNA-TVLCGDHVTLEAGTGCVHTA 332

Query: 463 PGHGQEDYVTSLKYG------LPILSPVDDEGKFTEEAGK---------FSGLDVLGDGN 507
           P HG++D+   ++Y       LPI+S V++ G +T++             +G+++  D  
Sbjct: 333 PAHGEDDFNIVMRYNKEGKTELPIVSLVNETGNYTKQVDDNRYGDTEFPLAGVEI-HDAE 391

Query: 508 VAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQV 566
           V V+K L    +L+ +    H+Y + WR K P I+RATEQWF+SV+G+RQ A+DAI  QV
Sbjct: 392 VPVIKILAHNNALLHKSSLRHQYAHCWRCKNPVIYRATEQWFSSVDGYRQQALDAIDNQV 451

Query: 567 KWVP 570
           +W+P
Sbjct: 452 QWIP 455



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 113/180 (62%), Gaps = 6/180 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGADV+RLWVSS DY  DV +   +++Q+S++YRK+R T R+LLGNL D+    + ++Y 
Sbjct: 634 YGADVMRLWVSSADYQADVRLSKDIVKQLSEVYRKIRNTFRFLLGNLDDFNPNTDKVAYA 693

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+   D++AL +LE + + + ++YE+Y+F  ++  I  F  VDLS+ Y DV KD +Y   
Sbjct: 694 DMSEFDKWALLRLEEVRQKVTDAYENYEFHMLYHAIHNFCTVDLSSIYLDVMKDTMYAES 753

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             +  RRS QT +   L ++V +++P+L   AE+VW+ +P     EDG   E V    WP
Sbjct: 754 KNNVARRSAQTAMYEILKTLVAMVSPVLSFTAEEVWKYMP----KEDG-MPESVMLQDWP 808


>gi|163750658|ref|ZP_02157895.1| isoleucyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161329653|gb|EDQ00644.1| isoleucyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 940

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 195/472 (41%), Positives = 272/472 (57%), Gaps = 34/472 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W    ++ ++ D   G   F+LHDGPPYANG+
Sbjct: 4   YKSTLNLPETEFPMRGNLANREPEMLKSWAADGLYQKIRDSRKGRTPFILHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH++NKILKDII + K L  +   Y+PGWDCHGLPIELKV Q + +   K +T ++ 
Sbjct: 64  IHIGHSVNKILKDIIVKSKTLSGFDAPYIPGWDCHGLPIELKVEQQIGKPGHK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V  Q   F R GV+ADW  PYLT+D   EA  +    ++   G++++G 
Sbjct: 123 REKCREYAAKQVDGQREGFIRLGVFADWYKPYLTMDFGTEANIVRSLSKVIESGHLHKGV 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLN-EFLPDLGLAVWT 343
           KPVHW     +ALAEAE+EY E   S +I   F         +   + E   D+ + +WT
Sbjct: 183 KPVHWCTDCGSALAEAEVEY-EDKKSPAIDVAFVATDKAALLAKFADVEIEADVSMVIWT 241

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+A+ A L Y++VE                      +KD     +I+A  
Sbjct: 242 TTPWTLPANRALAIAADLDYSLVEF---------------------VKDDATRVVILAEA 280

Query: 404 LVPTLEAKWGTKLVIKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           LV +   ++G      K LA   G +LE  R+ HP      PV++  D++T +SGTG+VH
Sbjct: 281 LVESCMQRYGVD--SHKVLAQVKGQELELLRFDHPFYGFDVPVIL-ADHVTVDSGTGIVH 337

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHGQ+D++  LKYGL + +PV D G +  +   F+G  V    N  VV  LDE+ +L
Sbjct: 338 TAPGHGQDDFIIGLKYGLEVANPVGDNGVYKSDTEFFAGQHVF-KANANVVTLLDEKGAL 396

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           I  E   H YP+ WR K P IFRAT QWF S++  G R+ A+  I + KW+P
Sbjct: 397 IKHETILHSYPHCWRHKTPIIFRATPQWFISMDKKGLRKQALGEIKKTKWIP 448



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 121/205 (59%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    ++G V  + PQ      GAD+LRLWV+  DY+G++ +  ++L++ +D YR
Sbjct: 599 VDGKGRKMSKSVGNV--IAPQTITNKLGADILRLWVAGTDYSGEMTVSDEILKRSADSYR 656

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+LL N++ +  V ++++ DD+  +D++ + +   + + I E+YE Y F  + Q
Sbjct: 657 RIRNTTRFLLANINGFDPVKDAVAIDDMVALDRWVVRRAAVLQEEILEAYEQYNFHTVTQ 716

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  V+L +FY D+ KDR YT    S  RRSCQT L     ++VR IAPIL   A++
Sbjct: 717 KLVQFCSVELGSFYLDIIKDRQYTAKGDSHARRSCQTALYLISEAMVRWIAPILSFTADE 776

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W+ LP       G    +VF  +W
Sbjct: 777 IWKLLP-------GERDAYVFTQEW 794


>gi|298529299|ref|ZP_07016702.1| isoleucyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510735|gb|EFI34638.1| isoleucyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 937

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 204/474 (43%), Positives = 271/474 (57%), Gaps = 43/474 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLR-VADKNDGENFVLHDGPPYANGN 164
           YK T++LP+TTF MRAN    EP   K W++   + + +    +   +VLHDGPPYANGN
Sbjct: 4   YKKTLNLPQTTFPMRANLTQNEPGTLKFWEETDAYKQMIQAGGEAPRYVLHDGPPYANGN 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMG A+NKILKDII + K    Y   YVPGWDCHGLPIE KV Q L     K++ P  +
Sbjct: 64  IHMGTAMNKILKDIIVKSKNFNGYLAEYVPGWDCHGLPIEHKVDQQLRAKG-KEVPPLTV 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   +  Q   FKR GV   W++PY T+ P+YEAA     G+    G + RGK
Sbjct: 123 RRLCREYATKYLGIQRKEFKRLGVLGVWDDPYQTMHPQYEAATARELGRFIQNGQVIRGK 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL---PDLGLA- 340
           KP++W    RTALAEAE+EY + H S SIY  F     P   +GL   F    PD   A 
Sbjct: 183 KPIYWCIDCRTALAEAEVEYDQ-HTSPSIYVAF-----PVKDTGLQKIFPQVDPDKTYAL 236

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+P N A+A +  L+Y++V++                            F I+
Sbjct: 237 IWTTTPWTLPGNKAIAAHPDLEYSLVQVDG-------------------------AFYIL 271

Query: 401 ASDLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           A +LV T    +G         + GS+LE  +  HP   R  P V+ G Y++ ESGTGLV
Sbjct: 272 AGELVETAAGIFGWQDYTDMGRVRGSELEGLQARHPFLERSSPFVLAG-YVSLESGTGLV 330

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG+EDY T LKYGL +LSP+DD G+F +     +G +V  + N  VV  L+EQ  
Sbjct: 331 HTAPGHGREDYETGLKYGLEVLSPLDDHGRFDDSVPFLAGKNV-HEANPLVVSRLEEQGL 389

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIG-QVKWVP 570
           L  ++   H YP+ WR K+P IFRAT QWF ++E    R  A++AI  QV+W+P
Sbjct: 390 LPAQKKMTHSYPHCWRCKQPVIFRATTQWFITMEANSLRHKALEAIKEQVQWIP 443



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 113/186 (60%), Gaps = 4/186 (2%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  + PQE    YGA++LR+WVS+VDY  DV I  ++L ++ D YR
Sbjct: 601 VDGEGRKMSKSIGNV--IAPQEIIDKYGAEILRIWVSAVDYQEDVRISQEILTRLVDAYR 658

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T RY+L NL+D+    + + +  +  +D+Y L  +    + +  +YE ++F K++ 
Sbjct: 659 RIRNTCRYVLSNLYDFDPQKDMVDFGRMHPLDRYTLHLVMEKDQAMHRAYERFEFHKVYH 718

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +    +++LS+FY D+ KDRLY     S  R+S Q+VL   L  +++ + PIL   AE+
Sbjct: 719 NLHNLCVLELSSFYLDIIKDRLYVPAPESLERKSAQSVLYHVLQVLLKNMLPILSFTAEE 778

Query: 730 VWQNLP 735
           ++++LP
Sbjct: 779 IYRHLP 784


>gi|419840079|ref|ZP_14363476.1| isoleucine--tRNA ligase [Haemophilus haemolyticus HK386]
 gi|386908384|gb|EIJ73080.1| isoleucine--tRNA ligase [Haemophilus haemolyticus HK386]
          Length = 941

 Score =  358 bits (919), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 195/471 (41%), Positives = 284/471 (60%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T+F MR +   REP++ K W +  ++ ++ + + G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETSFPMRGDLAKREPDMLKNWYEKNLYQKIREASKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + +T ++ 
Sbjct: 65  IHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKITAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIANGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL--LNEFLPDLGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F  VSA         + +    L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPAVSAVEIEEKFNAVGKGHGKLSAVIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + V +  ++ G  LE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGVEQVEVLGSVKGQSLELVRFNHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++   KY LP+   V ++GKF      F+G  V  + N  VV+ L E  +L+
Sbjct: 337 APDHGLDDFIVGQKYNLPMAGLVSNDGKFISTTEFFAGKGVF-EANPLVVEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 126/202 (62%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +    +++  +++  +D++A+    +  K I+++Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPQRDAVKPEEMISLDRWAVACALDAQKEIKDAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++WQ+LP      + +  EFVF
Sbjct: 774 EIWQHLPQT----ESARVEFVF 791


>gi|407794766|ref|ZP_11141788.1| isoleucyl-tRNA synthetase [Idiomarina xiamenensis 10-D-4]
 gi|407210961|gb|EKE80833.1| isoleucyl-tRNA synthetase [Idiomarina xiamenensis 10-D-4]
          Length = 947

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 195/480 (40%), Positives = 281/480 (58%), Gaps = 43/480 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REP + + W    ++ ++     G+  F+LHDGPPYANG 
Sbjct: 4   YKQTLNLPETAFPMRGNLAQREPVMLENWYQQDLYGQIRQAKAGKPTFILHDGPPYANGQ 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K L ++   YVPGWDCHGLPIEL+V +   +  KK LT ++ 
Sbjct: 64  IHIGHAVNKILKDIIVKAKTLSDFDAPYVPGWDCHGLPIELQVEKKHGKPGKK-LTLAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   FKR GV   W+ PYLT++ + EA  I    ++   G++ +G 
Sbjct: 123 RQKCREYALQQVEQQRTDFKRLGVLGAWDTPYLTMNFKQEADSIRALAKIIDNGHLQQGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVS-----------RSIYAVFRMVSAPPSTSGLLNEF 333
           KPVHW     +ALAEAE+EY +   +             + A F+     P         
Sbjct: 183 KPVHWCTDCGSALAEAEVEYQDKTSAAIDVRLPVMSETDVVARFQHPQGHPGNG------ 236

Query: 334 LPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQ 393
              L +A+WTTTPWT+PAN AV + A L+YA+V+I++  E                 K++
Sbjct: 237 --PLSVAIWTTTPWTMPANRAVTLAAGLEYALVQIEADAE-----------------KER 277

Query: 394 KKVFIIVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITT 452
           +   +I+ASDLV  +  ++      K     G DLE  +  HP+ + Q P+++ GD++TT
Sbjct: 278 QAERLIIASDLVADVMQRYDIDHYHKLGFCQGKDLEGVQLQHPLYDLQVPMIL-GDHVTT 336

Query: 453 ESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVK 512
           ESGTG VHTAPGHG +D++   KYG+ + +PV D G + ++   F+G+ VL   N A+++
Sbjct: 337 ESGTGCVHTAPGHGVDDFLVGQKYGIEVYNPVGDNGVYKDDTPLFAGMHVL-KANDAIIE 395

Query: 513 YLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASV--EGFRQAAMDAIGQVKWVP 570
            L EQ +L+  E Y+H YP+ WR K P IFRAT QWF S+  EG RQ A+  I  V+WVP
Sbjct: 396 QLREQGNLLHHEAYQHSYPHCWRHKTPIIFRATPQWFISMEKEGLRQQALTQIDAVQWVP 455



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 127/230 (55%), Gaps = 11/230 (4%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    ++G V  + PQ+     GAD+LRLWV+S DY+ ++ +  ++L++ +D Y
Sbjct: 605 TVDGQGRKMSKSLGNV--MSPQDVMNKLGADILRLWVASTDYSAEMTVSDEILKRSADAY 662

Query: 610 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +    +++   D+  +D++ + +  ++   +  +Y+SYQF ++ 
Sbjct: 663 RRIRNTARFLLANLNGFEPQQHALKQADMVELDRWIVGRAADLQAELLAAYDSYQFHQVV 722

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q +  F  ++L +FY D+ KDR YT       RRSCQT L     ++VR +API+   AE
Sbjct: 723 QKLMHFCSIELGSFYLDIIKDRQYTAKRDGNARRSCQTALYHIAEALVRWMAPIMSFTAE 782

Query: 729 DVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILEV 778
           ++WQ LP       G   +F     W     ++      E  +W ++L V
Sbjct: 783 EIWQALP-------GQRGKFAQADSWYQGFNEFAGVADSENRYWTELLAV 825


>gi|54307796|ref|YP_128816.1| isoleucyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81400140|sp|Q6LUL1.1|SYI_PHOPR RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|46912219|emb|CAG19014.1| putative Isoleucyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 954

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 201/474 (42%), Positives = 277/474 (58%), Gaps = 31/474 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVF--LRVADKNDGENFVLHDGPPYANG 163
           YK T++LP+T F MR N   REP + K WDD  ++  +R A K + ++F+LHDGPPYANG
Sbjct: 4   YKDTLNLPETGFPMRGNLAQREPVMLKRWDDEDLYGEIRKAKKGN-KSFILHDGPPYANG 62

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V +   +  +K LT ++
Sbjct: 63  DIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKWGKPGRK-LTAAE 121

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A   V+ Q  SF R GV   W+ PY T+D   EA  I   G+++   ++ +G
Sbjct: 122 FRQKCREYAAGQVEGQKESFIRLGVLGQWDKPYRTMDFATEANIIRSLGKVAENDHLLKG 181

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLL----NEFLPDLGL 339
            KPVHW     +ALAEAE+EY +  VS SI   F+ V      +       +E   D+ +
Sbjct: 182 FKPVHWCTDCGSALAEAEVEYQD-KVSPSIDVKFKAVDEAGVVAKFNCAEGHEGQGDVSV 240

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN AVAV   L+Y +V++++    D AA                   +I
Sbjct: 241 VIWTTTPWTMPANRAVAVRDDLEYVLVQVEADAANDKAA-----------------YRLI 283

Query: 400 VASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           VA++L   +  + G +         G+DLE  R+ HP  +   P+V+ GD++TTESGTG 
Sbjct: 284 VAAELAKDVMDRAGIEHFHNLGFCKGADLELMRFNHPFYSFDVPIVL-GDHVTTESGTGC 342

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQM 518
           VHTAPGHGQED+V   KYGL I +PV   G +  +   F+G  V    N  VV+ L E  
Sbjct: 343 VHTAPGHGQEDFVVGQKYGLEIANPVGSNGVYLPDTELFAGQHVF-KANDVVVETLKEHG 401

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           +L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+  I  V+W+P
Sbjct: 402 ALLHHHAYEHSYPHCWRHKTPIIFRATPQWFISMDKAGLRAKALGEIKNVQWLP 455



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 119/205 (58%), Gaps = 5/205 (2%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    ++G V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 607 VDGQGRKMSKSVGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 664

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL+ +    + ++ +++  +D++A+ +     + I ++Y+ Y    + Q
Sbjct: 665 RIRNTARFFLANLNGFNPETDLVAPEEMVALDRWAVGRAMEAQEEIIKAYDGYNLHGVTQ 724

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  V++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 725 RLMQFCSVEMGSFYLDVIKDRQYTAKQGGHAQRSCQTALFYIVEALVRWMAPIMSFTADE 784

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P A         +FVF  +W
Sbjct: 785 IWNEMP-ASQGNGEQRDKFVFTGEW 808


>gi|58262480|ref|XP_568650.1| isoleucyl-tRNA synthetase, mitochondrial [Cryptococcus neoformans
           var. neoformans JEC21]
 gi|134118956|ref|XP_771981.1| hypothetical protein CNBN1610 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50254585|gb|EAL17334.1| hypothetical protein CNBN1610 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57230824|gb|AAW47133.1| isoleucyl-tRNA synthetase, mitochondrial, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 1032

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 204/514 (39%), Positives = 295/514 (57%), Gaps = 62/514 (12%)

Query: 91  AAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE 150
           A  KA +  + ++  Y HT+ LPKTTF ++   +V   + ++     +++ +  D+N   
Sbjct: 36  ATTKANDPTQSKKKAYSHTLRLPKTTFPLKHKDVVAAEKRYRSKTCDELYRQQYDENPDP 95

Query: 151 NFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQS 210
            FVLHDGPPYANG+LHMGHALNK++KDIINRY +++  +V Y+PGWDCHGLPIE K L +
Sbjct: 96  LFVLHDGPPYANGHLHMGHALNKVIKDIINRYNVIRGRRVHYIPGWDCHGLPIEQKALAA 155

Query: 211 LDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNN---PYLTLDPEYEAAQ 267
           + +     LTP ++RA+A + A   +  Q    +  GV ADW++    Y TLD ++E  Q
Sbjct: 156 IGK-LHTSLTPDQVRAQARQVALDAIDIQKTEMRALGVMADWDSEKRTYRTLDHDFEIRQ 214

Query: 268 IEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAP---P 324
           + +F  M  +G++    +PV++SPSSRTALAEAELEY +GH SRS+Y     VS P    
Sbjct: 215 LRLFQAMVQKGFVTHRLRPVYYSPSSRTALAEAELEYKDGHRSRSVY-----VSLPVQED 269

Query: 325 STSGLLNEFL--------PDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDS 376
             S  L E           DL L +WTTTPW++P N+ VAV+  ++Y V           
Sbjct: 270 DMSDALKEVYDSVKKQGGQDLSLVIWTTTPWSLPGNSGVAVHNDMEYVVTS--------- 320

Query: 377 AAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVH-- 434
                          +Q ++F++ A +    +E   G   ++ +  AGS L   +Y H  
Sbjct: 321 --------------NEQGRLFVL-AGERKEAMEKIMGPLKIVGELKAGSQLVGTQYSHIF 365

Query: 435 --PVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL---PILSPVDDEGK 489
             P      P+V    ++T+++GTGLVH+AP HG EDYV   + G+    +  P+DD+GK
Sbjct: 366 HPPSSPLPKPIVFAAGHVTSQTGTGLVHSAPAHGYEDYVAFSEAGIILEKLRCPIDDDGK 425

Query: 490 FTEE------AGKFS-----GLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 538
           FTEE      AG  S     G +VLG+G  A+V  L E+  L+ EE  EH+YPYDW++KK
Sbjct: 426 FTEELVSWAGAGDESVSSLVGKEVLGEGTDAMVDLLRERGVLLAEETVEHRYPYDWKSKK 485

Query: 539 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           P I RAT QWFA VE  ++ A+ A+ +V + P Q
Sbjct: 486 PIIVRATPQWFADVEHIKEDALAALEEVHFHPAQ 519



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 113/209 (54%), Gaps = 15/209 (7%)

Query: 556 RQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGT 615
           R A +       +   Q++P YGADVLRLW +SVDYT D  IGP  +  ++++ R+LR T
Sbjct: 703 RAAGVSVSAYAAYSSSQDSPAYGADVLRLWAASVDYTSDASIGPSSISHVNELLRRLRNT 762

Query: 616 LRYLLGNLHDWRVGNS---ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQ 672
            R+LL N      G     +    L +ID+Y L +L ++  +++E+Y+ Y F K    I 
Sbjct: 763 TRFLLANT----CGEDKIFLEPSSLRIIDRYVLHELASLEVSVQEAYDRYNFSKAIHSIS 818

Query: 673 RFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQ 732
            F    LS  YFD+ KD LY   + S TR +   VL   LL +V+++API+PHL E++++
Sbjct: 819 TFATSTLSTLYFDIIKDTLYCDPSDSTTRSNVVGVLQHVLLRLVQMMAPIVPHLGEELYE 878

Query: 733 NLPFAYTLEDGSAAEFVFESKWPVLDEKW 761
           N+       DG     VF   W   DE W
Sbjct: 879 NM-------DGPKKSSVFLETWKP-DESW 899


>gi|218885370|ref|YP_002434691.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|254782391|sp|B8DPD6.1|SYI_DESVM RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|218756324|gb|ACL07223.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 938

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 199/470 (42%), Positives = 271/470 (57%), Gaps = 36/470 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T+ LP T F M+AN   REPE+ K W+    +  +A  +  +  +VLHDGPPYANG+
Sbjct: 4   YKKTLHLPDTKFPMKANLTQREPEMLKFWEGIDAYAAMAQASGQKGQYVLHDGPPYANGH 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G ALNKILKD++ + + +Q Y  RYVPGWDCHGLPIE KV Q L E  KK+L    +
Sbjct: 64  IHLGTALNKILKDMVVKSRNMQGYAARYVPGWDCHGLPIEHKVEQELGEK-KKELPAHVV 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  ++A+  +  Q   FKR GV   W+ PY+T+DP YE+A     G     G + R K
Sbjct: 123 RKRCRQYAEKYLDIQRKEFKRLGVLGAWDKPYMTMDPAYESATARELGNFVAAGNVVRSK 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KP++W  S +TALAEAE+EY + H S SI+  F +    P  + +LN       + +WTT
Sbjct: 183 KPIYWCCSCQTALAEAEVEYYD-HTSPSIFVRFPLRD--PKVADVLNVDPASAWIVIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P N AVAV+    YAVV                                ++A+ L
Sbjct: 240 TPWTLPDNMAVAVHPDHDYAVVR-------------------------HDGAHYVLAAAL 274

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V +    +G     +  T+ G+ LE     HP  +R  PVV+  DY+  +SGTG VHTAP
Sbjct: 275 VESSAKTFGWENCEVVSTVPGAKLEGLVATHPFYDRPSPVVL-ADYVVLDSGTGCVHTAP 333

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+EDY T L+YGL ILSP++DEG+F +    F+GL V  + N  V++ L E  +L+ E
Sbjct: 334 GHGREDYETGLRYGLEILSPLNDEGRFLDSVPFFAGLTVF-EANPKVIEKLREVGNLLAE 392

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 570
               H YP+ WR KKP IFRAT QWF ++E    R  A+ AI   V+W+P
Sbjct: 393 RKISHSYPHCWRCKKPVIFRATTQWFIAMEKNDLRARALSAIRNDVRWIP 442



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/187 (40%), Positives = 113/187 (60%), Gaps = 3/187 (1%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  + PQE    YGA++LRLWV+SVDY  D+ I  ++L ++ D YR
Sbjct: 600 VDGEGRKMSKSIGNV--IAPQEIIDKYGAEILRLWVASVDYREDIRISDEILSRLVDAYR 657

Query: 611 KLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 670
           ++R T RYLLGN+ D      + +  +  +D+YAL  + +    I+E+Y  ++F K+F  
Sbjct: 658 RIRNTCRYLLGNIDDLTPEEIVPFSVMDPLDRYALDIVTDAHARIQEAYSEFEFHKVFHT 717

Query: 671 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
           +    + DLS FY DV KDRLY     S  RRS QT L   LL +VR +AP+L   AE+V
Sbjct: 718 LHNLCVTDLSAFYLDVLKDRLYASAKDSPERRSAQTALLHILLVLVRDMAPVLSFTAEEV 777

Query: 731 WQNLPFA 737
           ++++P A
Sbjct: 778 FRHIPEA 784


>gi|312898161|ref|ZP_07757552.1| isoleucine--tRNA ligase [Megasphaera micronuciformis F0359]
 gi|310620658|gb|EFQ04227.1| isoleucine--tRNA ligase [Megasphaera micronuciformis F0359]
          Length = 931

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 200/475 (42%), Positives = 286/475 (60%), Gaps = 44/475 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y  T+ LP+T F MR N   REPE+   W D+ ++ +   K +G + F+LHDGPPYANG 
Sbjct: 3   YGKTLHLPETEFPMRGNLPKREPELLAFWKDNDIYHKRLKKREGAKKFILHDGPPYANGK 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHALNK+LKDII +YK  Q +  +YVPGWD HGLPIE  V++    + + +++P  L
Sbjct: 63  LHIGHALNKVLKDIILKYKTQQGFYTKYVPGWDTHGLPIEHAVIKETGLN-RHEMSPLDL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +   +A A V  Q A F R+GV  +W+ PYLTL    E AQI VFG M+ +GYIY+G 
Sbjct: 122 RKRCHDYALARVDEQRADFIRFGVLGEWDYPYLTLAKHVEVAQIGVFGTMAKKGYIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFR---MVSAPPSTSGLLNEFLPDLGLAV 341
           K V+W P   TALAEAE+EY E   S SI+  F+   + S  P      + +       +
Sbjct: 182 KAVYWCPHCETALAEAEIEYKEIK-SNSIFVRFKAEDLGSHAPQGFDKGHTY-----ALI 235

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN A+A N+ ++Y  V++     GD A                    +++A
Sbjct: 236 WTTTPWTIPANKAIAANSDIEYVWVKV-----GDDA--------------------LLLA 270

Query: 402 SDLV-PTLEAKWGTKL-VIKKTLAGSDLENCRYVHPV-DNRQCPVVIGGDYITTESGTGL 458
            +LV  ++EA   T+  V+   + G+D+E  R+VHP+ ++R+ PV++ GD++T E+GTGL
Sbjct: 271 KELVESSMEAAKVTEYEVLPGVMKGTDIEGLRFVHPMYEDRKVPVIL-GDHVTLEAGTGL 329

Query: 459 VHTAPGHGQEDYVTSLKY---GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLD 515
           VHTAP HG ED+    KY    L  +  V  +GK+T     + G   L D NV ++K L 
Sbjct: 330 VHTAPDHGVEDFEVCKKYPDWHLEPIGTVGPDGKYTSAVPGYEGKFAL-DMNVEMIKALA 388

Query: 516 EQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
              +L  +    H+Y + WR K P I+RATEQWF+SV+G+R+ A++AI QV+W+P
Sbjct: 389 ASGALFAKGSLRHQYAHCWRCKNPIIYRATEQWFSSVDGYRKKALEAIDQVQWIP 443



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/207 (42%), Positives = 135/207 (65%), Gaps = 9/207 (4%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    ++G    V PQE    YGADV+RLWVSS DY GDV + P++L+Q+SD+Y
Sbjct: 598 TVDGEGRKMSKSVGNT--VAPQEVIDQYGADVMRLWVSSADYQGDVRLSPKILKQLSDVY 655

Query: 610 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           RK+R T R+LLGN++D+    +++SY D+  ID++AL +LE +++ + E+YE+YQF  ++
Sbjct: 656 RKIRNTFRFLLGNINDFNPETDAVSYKDMSEIDKWALLRLEQVLETVTEAYENYQFHVMY 715

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
             I  F  VDLS+ Y DV KDR+YT  T +  RRS QT +   L ++V++++P+L   AE
Sbjct: 716 HTIHNFCTVDLSSIYLDVTKDRMYTEKTDARERRSAQTAMYIILDTLVKIVSPVLSFTAE 775

Query: 729 DVWQNLPFAYTLEDGSAAEFVFESKWP 755
           +VW+ +P     E     E V  + WP
Sbjct: 776 EVWKYMPAVSGKE-----ESVLLTDWP 797


>gi|256850938|ref|ZP_05556327.1| valyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661152|ref|ZP_05862066.1| valyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|256616000|gb|EEU21188.1| valyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548089|gb|EEX24065.1| valyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
          Length = 930

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 192/470 (40%), Positives = 280/470 (59%), Gaps = 39/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N   RE E  K W++++++ +    N+G+  F LHDGPP+ANG
Sbjct: 2   RIKDTLNLGKTKFPMRGNLPNREGEWQKAWEENKLYEQRLKLNEGKPRFDLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPS 222
           N+HMGH+LNKI KDII RYK +  +   +VPGWD HGLPIE ++  Q +D   +K +  +
Sbjct: 62  NIHMGHSLNKISKDIIVRYKNMSGFYAPFVPGWDTHGLPIEQQLAKQGVD---RKTMDRA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R    K+A   +  Q   FKR GV ADWN+PY+TL P++EA +I VFG+M  +GYIY+
Sbjct: 119 EYRELCRKYAMEQIDKQRTDFKRLGVMADWNHPYITLQPKFEAEEIRVFGKMFEKGYIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WSPSS + LAEAE+EY +   S +IY  F++        G+L+    D  + +W
Sbjct: 179 GLKPVYWSPSSESTLAEAEVEYHDVK-SPAIYVAFQVEDG----KGILDN---DTYMVIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P N  + VN K +Y+++++                        +++ F+I  S
Sbjct: 231 TTTPWTIPVNVGITVNPKFEYSLIKVAG----------------------EERKFVIGTS 268

Query: 403 DLVPTLE-AKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            L    E   W    V+  T  G+D +     HP+ ++   +V+   Y+T E GTGLVH 
Sbjct: 269 QLEKVAEDLDWQDYEVV-DTFKGTDFDRMTVKHPLYDK-TSLVMNDTYVTAEDGTGLVHN 326

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVL-GDGNVAVVKYLDEQMSL 520
           A G G++DY    KYGLP+ SP+DD+G++T++    + + V   D N  V K L+E+ +L
Sbjct: 327 ATGFGEDDYNVGKKYGLPVYSPMDDQGRYTKDIPDPNLVGVFYDDANKMVTKQLEEKRAL 386

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +    + H YP+DWRTKKP I+RAT QWFASV+ FR   +  I +  + P
Sbjct: 387 LKLSFFTHSYPHDWRTKKPVIYRATTQWFASVDAFRDQILAEIEKTNFTP 436



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 98/158 (62%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+S D T DV +   +L+Q ++ YRK+R TLRY+L N  D+    N ++Y D
Sbjct: 616 GAEIIRLWVASADTTSDVAVSKGILQQNAESYRKIRNTLRYMLANTSDFDPKANRVAYKD 675

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  IDQY    L  +VK+   +Y  + F  +++++ +FI  +LS FY D AKD LY  G 
Sbjct: 676 LRSIDQYMEVLLNKLVKDCLAAYNKFDFTNVYKMVFKFISNELSAFYLDFAKDVLYIEGE 735

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV+   L+ I +V+ PILPH  E+ W  L
Sbjct: 736 DSLPRRAMQTVIYDALVKITKVMTPILPHTMEEAWSYL 773


>gi|380490537|emb|CCF35944.1| isoleucyl-tRNA synthetase, partial [Colletotrichum higginsianum]
          Length = 531

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 277/475 (58%), Gaps = 45/475 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           +  T+ LPK+TF  R     +   + +  DD   F +    N+    F+LHDGPPYANG 
Sbjct: 5   WASTLRLPKSTFPPRPLPQFQADYLRRSADD---FYKWQSSNESRPGFILHDGPPYANGG 61

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHALNKILKD+INR K+ Q Y++RY PGWDCHGLPIELK + +      KD++  ++
Sbjct: 62  LHVGHALNKILKDMINRVKVQQGYRIRYRPGWDCHGLPIELKAVGT---SGGKDMSAVEI 118

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R  A + A  TV  QM  F+ YGV ADW+  + T+DP++E  Q+ +F QM  +G IYR  
Sbjct: 119 RKAARQLASTTVLEQMGGFQSYGVMADWDARWTTMDPDFEIRQLRLFQQMVRRGLIYRKS 178

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSSRTALAEAELEY E HVS + Y  + ++  P      L  F   L   +WTT
Sbjct: 179 KPVYWSPSSRTALAEAELEYNENHVSTAAYVRYPIIGGPS-----LGGFSGQLYAIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+A++  L YAV+ +     G +   A  +      L  +++  ++VAS  
Sbjct: 234 TPWTLPANRAIAIHDDLDYAVISVN----GSAYLTAVSRLEAVKGLFTEEEPQVVVAS-- 287

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPV--VIGGDYITTESGTGLVHTA 462
                            + GS+L+  +Y + +   Q     +I  D+++ +SGTGLVH A
Sbjct: 288 -----------------MKGSELKGLKYRNRLQGAQSAAQPIIHADFVSDDSGTGLVHVA 330

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFS------GLDVLGDGNVAVVKYLDE 516
           PGHG EDY    + G+   +P+DDEG FT EA   +         +L  G+ AV+  +  
Sbjct: 331 PGHGFEDYEACAELGIDAFAPIDDEGNFTREAFPDAPERLTEASSILKGGSKAVLALI-- 388

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPP 571
           Q  ++    Y+HKYPYDWRTK+P + R+T QWFA V   +  A++A+ +VK+VPP
Sbjct: 389 QDDVLNAAKYKHKYPYDWRTKQPVVMRSTAQWFADVGSIKDDAINALKEVKFVPP 443


>gi|94987493|ref|YP_595426.1| isoleucyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|442556344|ref|YP_007366169.1| isoleucyl-tRNA synthetase [Lawsonia intracellularis N343]
 gi|123082128|sp|Q1MPH2.1|SYI_LAWIP RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|94731742|emb|CAJ55105.1| Isoleucyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|441493791|gb|AGC50485.1| isoleucyl-tRNA synthetase [Lawsonia intracellularis N343]
          Length = 937

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 192/476 (40%), Positives = 286/476 (60%), Gaps = 47/476 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T++LP TTF M+AN + REPEI   W+++ V+ ++ + +  +  F+LHDGPPYANG+
Sbjct: 4   YKETLNLPNTTFPMKANLVQREPEIILWWEENAVYEKMLEASGAKGIFILHDGPPYANGH 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G ALNKILKDI+ + + +Q Y+  YVPGWDCHGLPIELKV Q L +  K+++  S +
Sbjct: 64  IHLGTALNKILKDIVIKSRNMQGYRSCYVPGWDCHGLPIELKVEQELGK-KKQEMPLSLI 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  ++A+  +  Q   FKR GV+  W++PY T+DP YE+       +   +G + R K
Sbjct: 123 RNRCREYAEKFLDIQREEFKRLGVFGSWDHPYQTMDPIYESVITLELARFVEKGSVIRSK 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGL----- 339
           KP++W  S  TALAEAE+EY + H S +I+  F      P     L+   P   L     
Sbjct: 183 KPIYWCYSCETALAEAEVEYAD-HTSSAIFVRF------PIHDKRLHTIFPQADLTTTSI 235

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+P+N A+A+NA   YA+++                          K  +II
Sbjct: 236 VIWTTTPWTLPSNMAIALNADFDYALLQ-------------------------YKNEYII 270

Query: 400 VASDLVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           +AS+LV     +  W    VI K + G DLE  +  HP+ +++  +V+ GD++T E+GTG
Sbjct: 271 IASELVDICLKQFNWEDAKVI-KVVQGKDLEGMKARHPLYDQESMIVL-GDHVTLEAGTG 328

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
            VHTAPGHG EDY  +L+Y L + SP+DD+G++ +    F+GL V    N  V++ L+E 
Sbjct: 329 CVHTAPGHGPEDYEVALRYNLDVYSPLDDQGRYLDTVKFFAGLRV-DQANPVVIQKLEEF 387

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQ-VKWVP 570
             +I +   +H YP+ WR K P IFRAT QWF S+E    R+ ++ AI + ++W+P
Sbjct: 388 HRIIQKNTIQHSYPHCWRCKSPVIFRATTQWFISMEKNNLREQSLKAIKKNIEWIP 443



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/218 (37%), Positives = 125/218 (57%), Gaps = 9/218 (4%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    ++G V    PQE    +G ++LRLWVSSVDY  DV I  ++L+++ D YR
Sbjct: 601 VDGDGRKMSKSMGNV--TSPQEIISKFGVEILRLWVSSVDYREDVRISNEILQRLVDAYR 658

Query: 611 KLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQI 670
           ++R T RYLLGN++D  +   +   ++  +DQY L  +      I++SY SY F  +F  
Sbjct: 659 RIRNTCRYLLGNINDLTLDELVPVKEMESLDQYILDVVATAYTEIQKSYISYDFHTVFHK 718

Query: 671 IQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
           +      DLS FY D+ KDRLYT G  S  R+S QT L   L  ++R +APIL   AE+V
Sbjct: 719 LHNLCTTDLSAFYLDILKDRLYTSGVRSHKRKSAQTALFYILHMLLRSMAPILSFTAEEV 778

Query: 731 WQNLPFAYTLEDGSAAEF----VFESKWPVLDEKWRTF 764
           ++ +P   TL+D +         FE+   +LD++ R++
Sbjct: 779 YKYIP--DTLKDDNVISVFMLPFFETSSFLLDDRVRSY 814


>gi|238019859|ref|ZP_04600285.1| hypothetical protein VEIDISOL_01735 [Veillonella dispar ATCC 17748]
 gi|237863383|gb|EEP64673.1| hypothetical protein VEIDISOL_01735 [Veillonella dispar ATCC 17748]
          Length = 944

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 199/484 (41%), Positives = 285/484 (58%), Gaps = 50/484 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVF-LRVADKNDGENFVLHDGPPYANGN 164
           Y  T+ LP+T F MR N   REPEI K W+D++++  R+  + D + F+LHDGPPYANG 
Sbjct: 3   YGKTLHLPETEFPMRGNLPKREPEILKFWEDNKIYEKRLELRKDAKPFILHDGPPYANGK 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHALNK LKDII +YK +  +  RY+PGWD HGLPIE  V+++   + + ++ P  L
Sbjct: 63  LHIGHALNKTLKDIIMKYKTMTGHYTRYIPGWDTHGLPIEHAVIKNTGLN-RHEMAPLDL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R+GV  +W  PYLTL PE+E  Q+ +FG+M+ +G+IY+G 
Sbjct: 122 RNKCKEYALECVETQKQDFIRFGVLGEWERPYLTLRPEFEVKQLGIFGEMAKRGHIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV-WT 343
           K V+W     TALAEAE+EY E   S SIY  F  VS    T  L     P    AV WT
Sbjct: 182 KTVYWCTHCETALAEAEIEYAEKK-SFSIYVKFPYVSEKKVT--LPAGVDPKQAFAVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A++VN +L+Y  V++     GD                     + ++A++
Sbjct: 239 TTPWTMPANVAISVNPELEYGWVKV-----GDE--------------------YYLMATE 273

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV       G +   I    +G+DLE   + HP   R    V+ GD++T E+GTG VHTA
Sbjct: 274 LVDAAMKDIGIEDYEIVNRFSGADLELAEFKHPFVERT-STVLCGDHVTLEAGTGCVHTA 332

Query: 463 PGHGQEDYVTSLKYG------LPILSPVDDEGKFTEEAGK---------FSGLDVLGDGN 507
           P HG++D+   ++Y       LPI+S V++ G +T++             +G+++  D  
Sbjct: 333 PAHGEDDFNIVMRYNKEGKTELPIVSLVNETGNYTKQVDDNRYGDTEFPLAGVEI-HDAE 391

Query: 508 VAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQV 566
           V V+K L    +L+ +    H+Y + WR K P I+RATEQWF+SV+G+RQ A+DAI  QV
Sbjct: 392 VPVIKILAHNNALLHKSSLRHQYAHCWRCKNPVIYRATEQWFSSVDGYRQQALDAIDNQV 451

Query: 567 KWVP 570
           +W+P
Sbjct: 452 QWIP 455



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 113/180 (62%), Gaps = 6/180 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGADV+RLWVSS DY  DV +   +++Q+S++YRK+R T R+LLGNL D+    + ++Y 
Sbjct: 634 YGADVMRLWVSSADYQADVRLSKDIVKQLSEVYRKIRNTFRFLLGNLDDFNPNTDKVAYA 693

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+   D++AL +LE + + + E+YE+Y+F  ++  I  F  VDLS+ Y DV KD +Y   
Sbjct: 694 DMSEFDKWALLRLEEVRQKVTEAYENYEFHMLYHAIHNFCTVDLSSIYLDVMKDTMYAES 753

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             +  RRS QT +   L ++V +++P+L   AE+VW+ +P     EDG   E V    WP
Sbjct: 754 KNNVARRSAQTAMYEILKTLVAMVSPVLSFTAEEVWKYMP----KEDG-MPESVMLQDWP 808


>gi|313891340|ref|ZP_07824956.1| isoleucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313120115|gb|EFR43291.1| isoleucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 937

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 196/478 (41%), Positives = 272/478 (56%), Gaps = 42/478 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN---FVLHDGPPYAN 162
           Y  T+ LP+T F MR N   REPE  K W ++ ++ +  +K   EN   FVLHDGPPYAN
Sbjct: 3   YSKTLQLPQTEFPMRGNLPKREPEFVKFWQENNLYEKRIEKRSSENAPLFVLHDGPPYAN 62

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G +H+GHALNK LKDII RYK ++   V +VPGWD HGLPIE  VL+   ED + ++TP 
Sbjct: 63  GKIHIGHALNKTLKDIIVRYKFMEGNNVNFVPGWDTHGLPIEYAVLKESGED-RANMTPI 121

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           +LR K  ++AK  +  Q   F R GV  DWNNPY+T D   EA QIEVFG+M+ +GYIY+
Sbjct: 122 ELRRKCLEYAKKWIAIQKEDFIRMGVIGDWNNPYVTYDKHLEARQIEVFGEMAKRGYIYK 181

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL-PDLGLAV 341
           GKK V+W  +  TALAEAE+EY E   S SIY  F +         LL E +  +   AV
Sbjct: 182 GKKTVYWCANCETALAEAEIEYKESK-SPSIYVKFPV----RDVKNLLPEGVSKEKAFAV 236

Query: 342 -WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
            WTTTPWT+PAN  + VN K  Y  V  +   E                       + ++
Sbjct: 237 IWTTTPWTIPANQHICVNPKFDYVWVHNKDADE-----------------------YYLM 273

Query: 401 ASDLVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           + +L P    E K      + + + G +L+   + HP+   +   V+ GD++T ++GTG 
Sbjct: 274 SKELAPKALEECKVENYEFVGRVMKGEELDMIEFSHPLITDRVVHVLEGDHVTLDAGTGC 333

Query: 459 VHTAPGHGQEDYVTSLKY------GLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVK 512
           VHTAPGHG +D+   LKY         ++ PVD +G+ T+EAG+     ++ D     + 
Sbjct: 334 VHTAPGHGSDDFNIHLKYVHAGKIDAEVICPVDAKGRMTKEAGEELEGQLVWDAQGKEIS 393

Query: 513 YLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            L     L+ ++   H+YP+ WR K P I+RATEQWFAS+  +R AA+ A+   K++P
Sbjct: 394 LLAHAGRLLGKKSMRHQYPHCWRCKNPVIYRATEQWFASINDYRDAALKAVNDTKFIP 451



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 131/212 (61%), Gaps = 4/212 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    ++G V  V PQ     YGADV+RLW++S DY GDV +  ++++QMSD+Y
Sbjct: 610 TVDGEGRKMSKSVGNV--VAPQTIINRYGADVMRLWIASSDYQGDVRLSDKIIKQMSDVY 667

Query: 610 RKLRGTLRYLLGNLHDWRV-GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           RK+R T RYLL NL+D+ V  ++I Y+++  ID++AL +LE +   + ++Y++Y+F  ++
Sbjct: 668 RKIRNTYRYLLSNLYDFDVEKDAIPYNEMEEIDKWALLRLEQVRDQVTKAYKNYEFHVMY 727

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
            +I  F  VD+S  Y D+ KD+LY     S  RRS QT +   L+++ +++AP+L    E
Sbjct: 728 HVIHNFCTVDMSAIYLDILKDKLYEEVPNSKERRSAQTAIHEILVTLTKLMAPVLAFTTE 787

Query: 729 DVWQNLPFAYTLEDGSAAEFVFESKWPVLDEK 760
           +VWQ +      E     E   E+K   LDEK
Sbjct: 788 EVWQAMKHTSKDEKSVHLENWPEAKPEYLDEK 819


>gi|325577254|ref|ZP_08147738.1| isoleucine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160836|gb|EGC72957.1| isoleucine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 941

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 197/471 (41%), Positives = 280/471 (59%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T F MR +   REP + K W D Q++ ++     G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETGFPMRGDLAKREPVMLKNWYDKQLYQKIRQATKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + +T ++ 
Sbjct: 65  IHIGHAVNKILKDIIVKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKITAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++   EA  I   G++   G++Y+G 
Sbjct: 124 RKKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFNTEANIIRTLGKVIANGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL--LNEFLPDLGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F  VSA         + +    L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPAVSAVEIEEKFNAVGKGHGKLSAVIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + V +  ++ G  LE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGVEQVEVLGSVKGQALELVRFNHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++   KY LP+   V ++GKF      F+G  V  + N  VV+ L E  +L+
Sbjct: 337 APDHGLDDFIVGQKYNLPMAGLVSNDGKFISTTEFFAGKGVF-EANPLVVEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 124/202 (61%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +    +++  +++  +D++A+    +  K I+++Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPQRDAVKPEEMISLDRWAVACALDAQKEIKDAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++W  LP   T      AEFVF
Sbjct: 774 EIWGYLPQTAT----PRAEFVF 791


>gi|303229983|ref|ZP_07316757.1| isoleucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515349|gb|EFL57317.1| isoleucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 944

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 199/484 (41%), Positives = 285/484 (58%), Gaps = 50/484 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFL-RVADKNDGENFVLHDGPPYANGN 164
           Y  T+ LP+T F MR N   REPEI K W+D++++  R+  + D + F+LHDGPPYANG 
Sbjct: 3   YGKTLHLPETEFPMRGNLPKREPEILKFWEDNKIYQKRLELRKDAKPFILHDGPPYANGK 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHALNK LKDII +YK +  +  RY+PGWD HGLPIE  V+++   + + ++ P  L
Sbjct: 63  LHIGHALNKTLKDIIMKYKTMTGHYTRYIPGWDTHGLPIEHAVIKNTGLN-RHEMAPLDL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R+GV  +W  PYLTL PE+E  Q+ +FG+M+ +G+IY+G 
Sbjct: 122 RNKCKEYALECVENQKQDFIRFGVLGEWERPYLTLRPEFEVKQLGIFGEMAKRGHIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV-WT 343
           K V+W     TALAEAE+EY E   S SIY  F  VS    T  L     P    AV WT
Sbjct: 182 KTVYWCTHCETALAEAEIEYAEKK-SFSIYVKFPYVSEKKVT--LPAGVDPKQAFAVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A++VN +L+Y  V++     GD                     + ++A++
Sbjct: 239 TTPWTMPANVAISVNPELEYGWVKV-----GDE--------------------YYLMATE 273

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV       G +   I    +G+DLE   + HP   R    V+ GD++T E+GTG VHTA
Sbjct: 274 LVDAAMKDIGIEDYEIVNRFSGADLELAEFKHPFVERNA-TVLCGDHVTLEAGTGCVHTA 332

Query: 463 PGHGQEDYVTSLKYG------LPILSPVDDEGKFTEEAGK---------FSGLDVLGDGN 507
           P HG++D+   ++Y       LPI+S V++ G +T++             +G+++  D  
Sbjct: 333 PAHGEDDFNIVMRYNKEGKTELPIVSLVNETGNYTKQVDDNRYGDTEFPLAGVEI-HDAE 391

Query: 508 VAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQV 566
           V V+K L    +L+ +    H+Y + WR K P I+RATEQWF+SV+G+RQ A+DAI  QV
Sbjct: 392 VPVIKILAHNNALLHKSSLRHQYAHCWRCKNPVIYRATEQWFSSVDGYRQQALDAIDNQV 451

Query: 567 KWVP 570
           +W+P
Sbjct: 452 QWIP 455



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 113/180 (62%), Gaps = 6/180 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGADV+RLWVSS DY  DV +   +++Q+S++YRK+R T R+LLGNL D+    + ++Y 
Sbjct: 634 YGADVMRLWVSSADYQADVRLSKDIVKQLSEVYRKIRNTFRFLLGNLDDFNPNTDKVAYA 693

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+   D++AL +LE + + + ++YE+Y+F  ++  I  F  VDLS+ Y DV KD +Y   
Sbjct: 694 DMSEFDKWALLRLEEVRQKVTDAYENYEFHMLYHAIHNFCTVDLSSIYLDVMKDTMYAES 753

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             +  RRS QT +   L ++V +++P+L   AE+VW+ +P     EDG   E V    WP
Sbjct: 754 KNNVARRSAQTAMYEILKTLVAMVSPVLSFTAEEVWKYMP----KEDG-MPESVMLQDWP 808


>gi|323342891|ref|ZP_08083123.1| isoleucine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464003|gb|EFY09197.1| isoleucine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 906

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 198/469 (42%), Positives = 279/469 (59%), Gaps = 43/469 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ LPKT F MR N   +EP I   WD+  ++ R+ +  +G   F +HDGPPYANGN
Sbjct: 3   YKDTLLLPKTDFEMRGNLNKKEPGIQADWDEMNLYERMQEVREGAPLFTVHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALN I KD+I R K +  Y+  + PGWD HGLPIE   +Q L  + +K++   + 
Sbjct: 63  IHIGHALNGIQKDLIVRTKFMAGYQTPFRPGWDTHGLPIE-NAIQKLGVN-RKEMPTYEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           RA   K+A   V  QMA FK  G   D+ NPYLTL+ ++EA QI VF +M+++G IY+G 
Sbjct: 121 RALCEKYAHEQVAIQMADFKSLGKIGDYKNPYLTLNKDFEATQIRVFAEMAMKGMIYKGL 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG--LAVW 342
           KPV+WSPSS +ALAEAE+EY E     +I+  F +V       G+L     D G  + +W
Sbjct: 181 KPVYWSPSSESALAEAEIEYRERR-DPAIFVAFDVVDG----KGVL-----DAGDKMVIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI-IVA 401
           TTTPWT+PAN A++VNA ++Y +V+ +                 GN+      VF+  + 
Sbjct: 231 TTTPWTIPANLAISVNANMEYVLVQTEK----------------GNM------VFMESLM 268

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
              +  LE + G    I K   G D+E     HP+ +R  P V+ GD++T E+GTG VHT
Sbjct: 269 ESALKELELEQGE---ILKRFKGRDIEGVTTQHPLYDRLSP-VLNGDHVTDEAGTGCVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D+     YG+  +SPV+++G  TE  G+F+GL    + N AV   L+   +L+
Sbjct: 325 APDHGVDDFNVCALYGIKPISPVNEQGVLTEVTGEFAGL-FFEEANKAVTMKLESLGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                +H Y +DWRTKKP I+RAT QWFAS++  RQ  +D I +V+W P
Sbjct: 384 KMGWIKHSYAHDWRTKKPIIYRATTQWFASIDSVRQNVLDEIEKVEWTP 432



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 98/154 (63%), Gaps = 1/154 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GAD+LRLWV+SVDY  D+ +   +L+Q+S+ YRK+R T R++ GNL ++ +  + I+ ++
Sbjct: 611 GADILRLWVASVDYHSDIKMSQDLLKQVSESYRKIRNTFRFMHGNLANFDIDVDGIAIEE 670

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L ++++Y L ++  + K  +E+Y+++ + K+   +   +   +S++Y D  KD LY    
Sbjct: 671 LSLLNRYVLNEVIRVNKEAQEAYKAFDYQKVTTSVVSSLTNMMSSYYLDYTKDILYIEKE 730

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
            + +RR  QTV+   L+   R++APIL H  E++
Sbjct: 731 DNRSRREIQTVIYHALMIYSRIMAPILVHTTEEL 764


>gi|90412466|ref|ZP_01220469.1| isoleucyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90326503|gb|EAS42909.1| isoleucyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 948

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 200/477 (41%), Positives = 277/477 (58%), Gaps = 37/477 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REP + K WDD  ++  +     G+ +F+LHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLAQREPVMLKRWDDEDLYGEIRKAKKGKKSFILHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V +   +  +K LT ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKWGKPGRK-LTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q  SF R GV   W+ PY T+D   EA  I   G+++   ++ +G 
Sbjct: 123 RQKCREYAAGQVEGQKESFIRLGVLGQWDKPYRTMDFATEANIIRSLGKVAENDHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF--------LPD 336
           KPVHW     +ALAEAE+EY +  VS SI   F+ V      +G++ +F          D
Sbjct: 183 KPVHWCTDCGSALAEAEVEYQD-KVSPSIDVKFKAV----DETGVVAKFNCAEGHEGQGD 237

Query: 337 LGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKV 396
           + + +WTTTPWT+PAN AVAV   L+Y +V++++    D AA                  
Sbjct: 238 VSVVIWTTTPWTMPANRAVAVRDDLEYVLVQVEADAANDKAA-----------------Y 280

Query: 397 FIIVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESG 455
            +IVA++L   +  + G +         G+DLE  R+ HP  +   P+V+ GD++TTESG
Sbjct: 281 RLIVAAELAKDVMDRAGIEHFHNLGFCKGADLELMRFNHPFYSFDVPIVL-GDHVTTESG 339

Query: 456 TGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLD 515
           TG VHTAPGHGQED+V   KYGL I +PV   G +  +   F+G  V    N  VV+ L 
Sbjct: 340 TGCVHTAPGHGQEDFVVGQKYGLEIANPVGSNGVYLPDTELFAGQHVF-KANDVVVETLK 398

Query: 516 EQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           E  +L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+  I  V+W+P
Sbjct: 399 EHGALLHHHAYEHSYPHCWRHKTPIIFRATPQWFISMDKAGLRAKALGEIKSVQWLP 455



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 119/205 (58%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    ++G V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 607 VDGQGRKMSKSVGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 664

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL+ +    + ++ +D+  +D++A+ +     + I ++Y+ Y    + Q
Sbjct: 665 RIRNTARFFLANLNGFNPETDLVAPEDMVALDRWAVGRAMEAQEEIIKAYDEYNLHGVTQ 724

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  V++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 725 RLMQFCSVEMGSFYLDVIKDRQYTAKQGGHAQRSCQTALYYIVEALVRWMAPIMSFTADE 784

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 785 IWNEMP-------GQRDKFVFTGEW 802


>gi|342905131|ref|ZP_08726922.1| Isoleucyl-tRNA synthetase [Haemophilus haemolyticus M21621]
 gi|341951818|gb|EGT78371.1| Isoleucyl-tRNA synthetase [Haemophilus haemolyticus M21621]
          Length = 941

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 195/471 (41%), Positives = 284/471 (60%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T+F MR +   REP++ K W +  ++ ++ + + G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETSFPMRGDLAKREPDMLKNWYEKNLYQKIREASKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + +T ++ 
Sbjct: 65  IHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKITAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIENGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL--LNEFLPDLGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F  VSA         + +    L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPAVSAVEIEEKFNAVGKGHGKLSAVIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LSDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + V +  ++ G  LE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGVEQVEVLGSVNGQALELVRFNHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++   KY LP+   V ++GKF      F+G  V  + N  VV+ L E  +L+
Sbjct: 337 APDHGLDDFIVGQKYNLPMAGLVSNDGKFISTTEFFAGKGVF-EANPLVVEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 125/202 (61%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +      +  +++  +D++A+    +  K I+++Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQKEIKDAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++WQ+LP     E G  AEFVF
Sbjct: 774 EIWQHLP---QTESGR-AEFVF 791


>gi|294139773|ref|YP_003555751.1| isoleucyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293326242|dbj|BAJ00973.1| isoleucyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 940

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 196/473 (41%), Positives = 277/473 (58%), Gaps = 36/473 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W +  ++ ++ D   G   F+LHDGPPYANG+
Sbjct: 4   YKSTLNLPETEFPMRGNLANREPEMLKAWTEDGLYQKIRDSRIGRTPFILHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH++NKILKDII + K L  +   Y+PGWDCHGLPIELKV Q + +   K +T ++ 
Sbjct: 64  IHIGHSVNKILKDIIVKSKTLSGFDAPYIPGWDCHGLPIELKVEQKVGKPGHK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V  Q   F R GV+ADW  PYLT+D   EA  +    ++   G++++G 
Sbjct: 123 REKCREYAAKQVDGQRDGFIRLGVFADWYKPYLTMDFGTEANIVRSLSKVIESGHLHKGV 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMV--SAPPSTSGLLNEFLPDLGLAVW 342
           KPVHW     +ALAEAE+EY E   S +I   F     +A  +  G L E   D+ + +W
Sbjct: 183 KPVHWCTDCGSALAEAEVEY-EDKKSPAIDVAFVATDKAALLAKFGAL-EIEADVSMVIW 240

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN A+++ A L Y++VE                      +KD     +I+A 
Sbjct: 241 TTTPWTLPANRALSIAADLDYSLVEF---------------------VKDDATRVVILAE 279

Query: 403 DLVPTLEAKWGTKLVIKKTLA---GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
            LV +   ++G      K LA   G +LE  R+ HP      PV++ GD++T +SGTG+V
Sbjct: 280 ALVESCMERYGVD--SHKVLAQVKGQELELLRFDHPFYGFDVPVIL-GDHVTVDSGTGIV 336

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHGQ+D++  LKYGL + +PV D G +  +   F+G  V    N  VV  L+E+ +
Sbjct: 337 HTAPGHGQDDFIIGLKYGLEVANPVGDNGVYKSDTEIFAGQHVF-KANANVVTLLEEKGA 395

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           L+  E   H YP+ WR K P IFRAT QWF S++  G R+ A+  I + KW+P
Sbjct: 396 LVKHESILHSYPHCWRHKTPIIFRATPQWFISMDNKGLRKQALGEIEKTKWIP 448



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 122/206 (59%), Gaps = 11/206 (5%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    ++G V  + PQ      GAD+LRLWV+  DY+G++ +  ++L++ +D Y
Sbjct: 598 TVDGKGRKMSKSVGNV--IAPQTITNKLGADILRLWVAGTDYSGEMTVSDEILKRSADSY 655

Query: 610 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL N++ +  V ++++ +D+  +D++ + +   + + + E+Y+ Y F  + 
Sbjct: 656 RRIRNTTRFLLANINGFDPVTDAVAIEDMVALDRWVVRRAAALQEELLEAYDQYNFHSVT 715

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + +F  V+L +FY D+ KDR YT    S  RRSCQ+ L     ++VR IAPIL   A+
Sbjct: 716 QKLMQFCSVELGSFYLDIIKDRQYTAKGDSHARRSCQSALYLISEAMVRWIAPILSFTAD 775

Query: 729 DVWQNLPFAYTLEDGSAAEFVFESKW 754
           ++W+ LP       G    +VF  +W
Sbjct: 776 EIWKLLP-------GERDAYVFTQEW 794


>gi|262274901|ref|ZP_06052712.1| isoleucyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262221464|gb|EEY72778.1| isoleucyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 942

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 197/473 (41%), Positives = 279/473 (58%), Gaps = 34/473 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           +K T++LP+T F MR N   REP++ K W D  ++  +     G+ +F+LHDGPPYANGN
Sbjct: 4   FKDTLNLPETAFPMRGNLAQREPQMLKRWYDEDLYGEIRKAKKGKKSFILHDGPPYANGN 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH++NKILKDII + K L ++   YVPGWDCHGLPIEL V + + +  +K ++ ++ 
Sbjct: 64  IHIGHSVNKILKDIIIKSKTLSDFDAPYVPGWDCHGLPIELMVEKKVGKPGQK-VSAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q A FKR GV  +W+ PYLT+D + EA  I   G+++  G++++G 
Sbjct: 123 RKKCREYAAQQVEGQKADFKRLGVLGEWDKPYLTMDFDTEANIIRALGKIAGNGHLHKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLL----NEFLPDLGLA 340
           KPVHW     +ALAEAE+EY    VS SI  +FR V      S       +E   D+ + 
Sbjct: 183 KPVHWCTDCGSALAEAEVEY-YNKVSPSIDVMFRAVDEAAVLSKFNLKEGHEGQGDVSIV 241

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AVAV+  L+Y +V++    EGD+                     +I+
Sbjct: 242 IWTTTPWTLPANRAVAVSDHLEYVLVQV----EGDTPRR------------------LIM 279

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSD-LENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           AS+L   +  + G +          D LE  R+ HP  +   PV++ GD++TTESGTG+V
Sbjct: 280 ASELAKDVMDRAGIEHFHNLGFCKGDALELLRFHHPFYSFDVPVIL-GDHVTTESGTGVV 338

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHGQED+    KY L + +PV   G +  +   F+G  VL   N  VV  L    +
Sbjct: 339 HTAPGHGQEDFAVGQKYNLEVANPVGSNGVYLPDTELFAGQHVL-KANDNVVDVLKAHDA 397

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           L+    YEH YP+ WR K P IFRAT QWF S+E  G R  A++ I  V+W+P
Sbjct: 398 LLHYHAYEHSYPHCWRHKTPIIFRATPQWFISMEKAGLRAKALEEIKNVQWIP 450



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 119/206 (57%), Gaps = 11/206 (5%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG V  + PQ+     G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 600 TVDGQGRKMSKSIGNV--ISPQDVMNKLGGDILRLWVASTDYTGEMTVSDEILKRSADAY 657

Query: 610 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +    + ++ +DL + D++A+ +     + I ++Y+   F  + 
Sbjct: 658 RRIRNTARFLLANLNGFNPETDLVAAEDLVVADRWAVGKALEAQEEIIKAYDECNFHAVT 717

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + +F  V++ +FY D+ KDR YT    +   RSCQT L   + ++VR +API+   A+
Sbjct: 718 QRLMQFCSVEMGSFYLDIIKDRQYTAKAGAHAHRSCQTALFHIVEALVRWMAPIMSFTAD 777

Query: 729 DVWQNLPFAYTLEDGSAAEFVFESKW 754
           ++W  +P       G   +FVF   W
Sbjct: 778 EIWNEMP-------GKRNKFVFTEVW 796


>gi|336066306|ref|YP_004561164.1| isoleucyl-tRNA synthetase [Erysipelothrix rhusiopathiae str.
           Fujisawa]
 gi|334296252|dbj|BAK32123.1| isoleucyl-tRNA synthetase [Erysipelothrix rhusiopathiae str.
           Fujisawa]
          Length = 906

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 198/469 (42%), Positives = 279/469 (59%), Gaps = 43/469 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ LPKT F MR N   +EP I   WD+  ++ R+ +  +G   F +HDGPPYANGN
Sbjct: 3   YKDTLLLPKTDFEMRGNLNKKEPGIQADWDEMNLYERMQEVREGAPLFTVHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALN I KD+I R K +  Y+  + PGWD HGLPIE   +Q L  + +K++   + 
Sbjct: 63  IHIGHALNGIQKDLIVRTKFMAGYQTPFRPGWDTHGLPIE-NAIQKLGVN-RKEMPTYEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           RA   K+A   V  QMA FK  G   D+ NPYLTL+ ++EA QI VF +M+++G IY+G 
Sbjct: 121 RALCEKYAHEQVAIQMADFKSLGKIGDYKNPYLTLNKDFEATQIRVFAEMAMKGMIYKGL 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG--LAVW 342
           KPV+WSPSS +ALAEAE+EY E     +I+  F +V       G+L     D G  + +W
Sbjct: 181 KPVYWSPSSESALAEAEIEYRERR-DPAIFVAFDVVDG----KGVL-----DAGDKMVIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI-IVA 401
           TTTPWT+PAN A++VNA ++Y +V+ +                 GN+      VF+  + 
Sbjct: 231 TTTPWTIPANLAISVNANMEYVLVQTEK----------------GNM------VFMESLM 268

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
              +  LE + G    I K   G D+E     HP+ +R  P V+ GD++T E+GTG VHT
Sbjct: 269 ESALKELELEQGE---ILKRFKGRDIEGVTTQHPLYDRLSP-VLNGDHVTDEAGTGCVHT 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D+     YG+  +SPV+++G  TE  G+F+GL    + N AV   L+   +L+
Sbjct: 325 APDHGVDDFNVCALYGIKPISPVNEQGVLTEVTGEFAGL-FFEEANKAVTMKLESLGALL 383

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                +H Y +DWRTKKP I+RAT QWFAS++  RQ  +D I +V+W P
Sbjct: 384 KMGWIKHSYAHDWRTKKPIIYRATTQWFASIDSVRQNVLDEIEKVEWTP 432



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 97/154 (62%), Gaps = 1/154 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GAD+LRLWV+SVDY  D+ +   +L+Q+S+ YRK+R T R++ GNL ++ +  + I+ ++
Sbjct: 611 GADILRLWVASVDYHSDIKMSQDLLKQVSESYRKIRNTFRFMHGNLANFDIDVDGIAIEE 670

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L ++++Y L ++  + K  +E+Y+++ + K+   +   +   +S++Y D  KD LY    
Sbjct: 671 LSLLNRYVLNEVIRVNKEAQEAYKAFDYQKVTTSVVSSLTNMMSSYYLDYTKDILYIEKE 730

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
              +RR  QTV+   L+   R++APIL H  E++
Sbjct: 731 DDRSRREIQTVIYHALMIYSRIMAPILVHTTEEL 764


>gi|357406900|ref|YP_004918824.1| isoleucyl-tRNA synthetase [Methylomicrobium alcaliphilum 20Z]
 gi|351719565|emb|CCE25241.1| isoleucine tRNA synthetase (Isoleucine--tRNA ligase) (IleRS)
           [Methylomicrobium alcaliphilum 20Z]
          Length = 941

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 197/475 (41%), Positives = 278/475 (58%), Gaps = 37/475 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LPKT F M+AN   REPE    W+D  ++ ++ ++  G   F+LHDGPPYANG 
Sbjct: 3   YKTTLNLPKTDFPMKANLAQREPERLAAWNDIDLYRKIREEFAGRPRFILHDGPPYANGA 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NK+LKDII + K L  +   YVPGWDCHGLPIEL V + + +   K ++ ++ 
Sbjct: 63  IHIGHAVNKVLKDIIVKSKSLSGFDAPYVPGWDCHGLPIELMVEKKVGKAGGK-VSEAQF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A   V+ Q   F R GV  +W+NPYLT++ ++EA  +   G++S  G++ +G 
Sbjct: 122 RNACRDYAAKQVEMQKGEFIRLGVLGEWDNPYLTMNYKFEADIVRALGKISKNGHLSKGA 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD------LG 338
           KPVHW     +ALAEAE+EY + H S +I   F++V      +      +P+      + 
Sbjct: 182 KPVHWCTDCGSALAEAEVEYEDKH-SPAIDVRFQVVDEAAFLARC--HHVPEHEGEGPIS 238

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           + +WTTTPWT+PAN AVA+N +L+YAVV+ +                     KD  K  +
Sbjct: 239 VVIWTTTPWTLPANQAVALNPELEYAVVQCE---------------------KDGAKERL 277

Query: 399 IVASDLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           ++A  L+     ++G +   +     G  LEN    HP   RQ PV++ GD++T E+GTG
Sbjct: 278 VLAEALLKDAMLRYGFEDYHVIAYCKGDALENQLLQHPFYARQVPVIL-GDHVTIEAGTG 336

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
            VHTAPGHGQEDYV  LKY LP+ +PV D G F      F+G  V    N  V+  L EQ
Sbjct: 337 AVHTAPGHGQEDYVVGLKYDLPVDNPVGDNGVFLPNTELFAGEHVF-TANDHVLAVLAEQ 395

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             L+  E   H YP+ WR K P IFRAT QWF S+E  G R  A++ IG+V+W+P
Sbjct: 396 GKLVHHESMLHSYPHCWRHKTPIIFRATPQWFISMEKNGLRDKALEEIGKVQWIP 450



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 118/208 (56%), Gaps = 10/208 (4%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDD 636
           GADVLRLWVS+ DY  ++ +  ++L++ SD+YR+LR T R+LL NL  +    +++  ++
Sbjct: 625 GADVLRLWVSATDYRAEMNVSDEILKRTSDVYRRLRNTARFLLSNLDGFDPALHTVPANE 684

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +D++ + +   + + +  +YESYQF +++Q +  F  VDL  FY D+ KDR YT   
Sbjct: 685 LLALDRWVVDRAYCLQQEVVAAYESYQFHQVYQKVHNFCAVDLGGFYLDIIKDRQYTAKE 744

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW-P 755
               RRS QT +     ++ R ++PI+ + A+++W  LP       G  ++ VF   W  
Sbjct: 745 DGLARRSAQTAMYHVAEALTRWLSPIISYTADEIWHYLP-------GQRSQSVFLETWYQ 797

Query: 756 VLDEKWRTFPVGEIYFWGKILEVIVVVT 783
            L E  +  P+    FW K++ V   V+
Sbjct: 798 GLFELDKDSPMDRD-FWSKVMAVREAVS 824


>gi|383934322|ref|ZP_09987764.1| isoleucyl-tRNA synthetase [Rheinheimera nanhaiensis E407-8]
 gi|383704778|dbj|GAB57855.1| isoleucyl-tRNA synthetase [Rheinheimera nanhaiensis E407-8]
          Length = 942

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 197/477 (41%), Positives = 283/477 (59%), Gaps = 41/477 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRV-ADKNDGENFVLHDGPPYANGN 164
           YKHT++LP+T F MRAN   REP++   W +  ++ ++ A K   + F+LHDGPPYANGN
Sbjct: 4   YKHTLNLPETAFAMRANLAQREPQMLAKWTEADLYGKIRAAKKGKKTFILHDGPPYANGN 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K L +Y   YVPGWDCHGLPIEL V +   +   K LT ++ 
Sbjct: 64  IHIGHAVNKILKDIIVKAKTLDDYDAPYVPGWDCHGLPIELVVEKKYGKPGTK-LTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A+  + AQ   F R GV  DW NPY T+D  +EA  I   G++   G++ +G 
Sbjct: 123 RQKCREYAQTQIDAQRTDFIRLGVLGDWQNPYRTMDYRFEANIIRALGRIIDNGHLQQGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF-LPD------- 336
           KPVHW     +ALAEAE+EY +  VS +I   F  V        +++ F  P+       
Sbjct: 183 KPVHWCTDCGSALAEAEVEY-QDKVSPAIDVRFAAVD-----EAVVDRFDHPEGKRGSGK 236

Query: 337 LGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKV 396
           + + +WTTTPWT+PAN AVAVNAKL Y++V+++         P   +             
Sbjct: 237 VSVVIWTTTPWTIPANRAVAVNAKLDYSLVQVEQ-------GPLGAER------------ 277

Query: 397 FIIVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESG 455
            +I+A+DLV  + A+ G +       A G+ LE  +  HP+     PV++ G+++TT+SG
Sbjct: 278 -LIIATDLVKDVMARAGIEHYHALGFAKGAALELVQLKHPLYAFNVPVIL-GEHVTTDSG 335

Query: 456 TGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLD 515
           TG VHTAPGHGQED+V   +Y L + +PV   G +  +   F+G  V    N +VV+ L 
Sbjct: 336 TGCVHTAPGHGQEDFVVGKQYNLEVANPVGANGVYLPDTPLFAGQHVF-KANDSVVEALK 394

Query: 516 EQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           +  +L++ + Y+H YP+ WR K P IFRAT QWF S+E  G R  ++  I Q +W+P
Sbjct: 395 DAGALLVHKAYKHSYPHCWRHKTPIIFRATPQWFISMEQQGLRATSLAQIEQTRWIP 451



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 113/188 (60%), Gaps = 9/188 (4%)

Query: 569 VPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 627
           V PQ+     GAD+LRLWV++ DYT ++ +  ++L + +D YR++R T R+LL NL+ + 
Sbjct: 618 VSPQDVMNKLGADILRLWVATTDYTSEMTVSDEILNRAADKYRRIRNTARFLLANLNGFN 677

Query: 628 -VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
              +++++D +  +D + + +   + + I E+Y+SYQF  + Q +  F  V+L +FY DV
Sbjct: 678 PATDAVAFDSMVELDLWVVNRAAKLQQEIIEAYDSYQFHLVSQKLMNFCTVELGSFYLDV 737

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 746
            KDR YT  T S  RRSCQT L     ++VR +API+   A+++WQ LP       G   
Sbjct: 738 VKDRQYTAHTNSVARRSCQTALYHIAQAMVRWMAPIMSFTAQEIWQELP-------GQTQ 790

Query: 747 EFVFESKW 754
           EFVF   W
Sbjct: 791 EFVFTDVW 798


>gi|302341853|ref|YP_003806382.1| isoleucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638466|gb|ADK83788.1| isoleucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 937

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 203/477 (42%), Positives = 277/477 (58%), Gaps = 50/477 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T+F M+A    REPE+   WD+  ++  +  ++ G   F+LHDGPPYANGN
Sbjct: 3   YKNTLNLPQTSFPMKAGLPQREPEMLARWDEMGLYGLLRQQSAGRPKFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMG A NK+LKD I + + +  +   YVPGWDCHGLPIE +V ++L ++A    +   +
Sbjct: 63  IHMGTAFNKVLKDFIVKSRQMAGFDAVYVPGWDCHGLPIEYQVTKNLGDEACHK-SQIDI 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  K+A+  +  Q   F R GV  DW +PYLT+   YEAA    F ++   G +YR K
Sbjct: 122 RRRCRKYAEKYIDIQRDEFVRLGVLGDWPDPYLTMKYSYEAAIAREFCRIYAGGGVYRSK 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVS--AP--PSTSGLLNEFLPDLGLA 340
           KPVHW    RTALAEAE+EY + H S+SI+  FR+V    P  P  +G       D+ L 
Sbjct: 182 KPVHWCMDCRTALAEAEVEYHD-HKSKSIFVAFRLVDDLGPKYPELAGR------DVSLV 234

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AVA N +L+YA VE                         + KV+I+ 
Sbjct: 235 IWTTTPWTIPANLAVAANPELEYAAVE------------------------HEGKVYIMA 270

Query: 401 ASDLVPTLEA----KWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGT 456
           A      +EA     W T   +       DLE  +  HP+ +R   V +  DY+T E+GT
Sbjct: 271 ARLAPLNMEAFGFQGWRTLCAVDPL----DLEGKKAKHPLYDR-LSVGVLADYVTLEAGT 325

Query: 457 GLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDE 516
           GLVHTAPGHG+EDY T  +YGL   +PVDD+G+FT EA  F G +V  + N A++  L E
Sbjct: 326 GLVHTAPGHGREDYDTGRRYGLEPFAPVDDDGRFTAEAAPFEGQNVF-EANEAIIAALRE 384

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 570
             +L+  E   H YP  WR K+P IFRAT QWF S+E    R  ++ AI   V+WVP
Sbjct: 385 AGALLAVEEISHSYPCCWRCKQPVIFRATPQWFISMEENDLRARSLKAIQNDVRWVP 441



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 119/188 (63%), Gaps = 4/188 (2%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    ++G V  + PQ+    YGA++LRLWV++ DYT D+ +   +L+Q+++ YR
Sbjct: 597 VDGDGRKMSKSLGNV--IAPQKVIDQYGAEILRLWVAAEDYTVDIRLSNDILKQLAEAYR 654

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T+R++LGNLHD+    ++++ D +  +D+  L +L+ ++  +R+ YE + F   F 
Sbjct: 655 RIRNTMRFMLGNLHDFDPQAHAVAPDQMGQMDRLMLHRLQELIGRVRKGYEDFAFHACFH 714

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  + +VDLS FY DV KDRLYT       RR+ QTVL   L ++VR+ APIL   AE+
Sbjct: 715 GLHNYCVVDLSGFYLDVLKDRLYTCAPDDPARRAAQTVLYHTLSAMVRLAAPILSFTAEE 774

Query: 730 VWQNLPFA 737
           VW  LP A
Sbjct: 775 VWDYLPGA 782


>gi|149911069|ref|ZP_01899697.1| isoleucyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805895|gb|EDM65883.1| isoleucyl-tRNA synthetase [Moritella sp. PE36]
          Length = 939

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 191/469 (40%), Positives = 274/469 (58%), Gaps = 29/469 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRV-ADKNDGENFVLHDGPPYANGN 164
           YK T++LPKT F MRAN   REP + K W    ++ ++ A K   + F+LHDGPPYANG+
Sbjct: 4   YKKTLNLPKTGFAMRANLANREPNMLKQWTTDDLYGKIRAAKKGKKTFILHDGPPYANGS 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH++NKILKD+I + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHSVNKILKDVIIKAKGLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGRK-VTAAQF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  K+A   V  Q   F R GV  DW NPYLT+D   EA  I    ++   G++ +G 
Sbjct: 123 REECRKYATKQVNGQRQDFIRLGVLGDWQNPYLTMDFNTEANIIRALSKIVANGHLQKGS 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPVHW     +ALAEAE+EY E   S +IY  F         +   ++    +   +WTT
Sbjct: 183 KPVHWCTDCGSALAEAEVEY-EDKKSPAIYVRFTAQDQAAVKAVFGSDVEGLVSTVIWTT 241

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN AVA+  +++Y++V                     N++ +     +I+A+DL
Sbjct: 242 TPWTLPANRAVALAERVEYSLV---------------------NMVTESGSQQLILATDL 280

Query: 405 VPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V +  A +  +      T  G+ LEN R+ HP  +   P ++  D++TT++GTG+VHTAP
Sbjct: 281 VESCMAVFAPESFTTLGTCTGAALENLRFNHPFYDFDVPAIL-ADHVTTDAGTGVVHTAP 339

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHGQEDYV  L+Y L I +PV + G + E+   F+G  V    N  V++ L E+ +L+  
Sbjct: 340 GHGQEDYVAGLRYNLEIANPVGNNGVYLEDTPLFAGQHVF-KANDNVIEVLTEKGALLNH 398

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           +  +H YP+ WR K P IFRAT QWF S+E  G R AAM  I  V+WVP
Sbjct: 399 QVIKHSYPHCWRHKTPIIFRATPQWFISMELNGLRNAAMGEIKNVEWVP 447



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 110/195 (56%), Gaps = 11/195 (5%)

Query: 562 AIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 620
           +IG V  + PQ+     G DVLR WV+S DYTG++ +  ++L + +D YR++R T R+LL
Sbjct: 608 SIGNV--MAPQDVMNRLGGDVLRWWVASTDYTGEMTVSDEILDRSADAYRRIRNTARFLL 665

Query: 621 GNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDL 679
            NL  +      ++ +D+  +D++A+ +   +   I   YESYQ   + Q +  F  ++L
Sbjct: 666 SNLEGFNPETDLVATEDMVALDRWAVGRAHALQTEILADYESYQMQSVTQKLMTFCSMEL 725

Query: 680 SNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT 739
            +FY D+ KDR YT  +    RRSCQT +   L ++VR  APIL   + ++W  +P    
Sbjct: 726 GSFYLDIIKDRQYTAKSDGVARRSCQTAMFHILEAMVRWTAPILSFTSFEIWNAMP---- 781

Query: 740 LEDGSAAEFVFESKW 754
              G  AE+VF  +W
Sbjct: 782 ---GERAEYVFTEEW 793


>gi|441503651|ref|ZP_20985653.1| Isoleucyl-tRNA synthetase [Photobacterium sp. AK15]
 gi|441428727|gb|ELR66187.1| Isoleucyl-tRNA synthetase [Photobacterium sp. AK15]
          Length = 954

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 198/473 (41%), Positives = 277/473 (58%), Gaps = 29/473 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REP + K W D  ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLANREPAMLKRWYDEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFNAPYIPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   +A   V+ Q  SF R GV  +W+ PY T+D   EA  I   G+++ QG++ +G 
Sbjct: 123 REKCRTYAAGQVEGQKESFMRLGVLGEWDKPYRTMDFATEANIIRSLGKIADQGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL----LNEFLPDLGLA 340
           KPVHW     +ALAEAE+EY +  VS SI   F+ V      +       +E   D+ + 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVKFKAVDEAAVVAKFDCAEGHEGQGDVSIV 241

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AVA+   L+Y  V IQ+    DS  P+ +               +IV
Sbjct: 242 IWTTTPWTLPANRAVAIRDDLEY--VLIQTEGGSDSEQPSER---------------LIV 284

Query: 401 ASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           A++L   +  + G +         G++LE  R+ HP  +   PV++ GD++TT+SGTG V
Sbjct: 285 AAELAKDVMDRAGIEQYRNLGFCKGAELELVRFNHPFYSFDVPVIL-GDHVTTDSGTGCV 343

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHGQED+    KYGL + +PV   G +  +   F+G  V    N AVV+ L E  +
Sbjct: 344 HTAPGHGQEDFAVGQKYGLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVVETLKEHGA 402

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           L+    YEH YP+ WR K P IFRAT QWF S++  G R  A++ I  V+W+P
Sbjct: 403 LLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALEEIKSVQWMP 455



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 119/205 (58%), Gaps = 5/205 (2%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 607 VDGQGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 664

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL  +    + ++ +D+  +D++A+ + +   + I ++Y+ Y    + Q
Sbjct: 665 RIRNTARFFLANLSGFNPETDCVAAEDMVALDRWAVGRAKAAQEEIIKAYDDYNLHAVTQ 724

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  V++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 725 RLMQFCSVEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALYYIVEALVRWMAPIMSFTADE 784

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P A         +FVF  +W
Sbjct: 785 IWNEMP-ASQGNGEQRDKFVFTGEW 808


>gi|392552095|ref|ZP_10299232.1| isoleucyl-tRNA ligase [Pseudoalteromonas spongiae UST010723-006]
          Length = 942

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 191/473 (40%), Positives = 281/473 (59%), Gaps = 33/473 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YKHT++LP+T F MR N   REP++ K W +  ++ ++     G+ +F+LHDGPPYANGN
Sbjct: 4   YKHTLNLPETEFPMRGNLAKREPQMLKSWYEKDLYGQIRTAKKGKKSFILHDGPPYANGN 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH++NKILKDII + K L  +   YVPGWDCHGLPIEL+V +       K ++ ++ 
Sbjct: 64  IHLGHSVNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPIELQV-EKKVGKPGKKVSVAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   +AK  V+ Q A FKR GV+ DW+ PYLT++ ++EA  I V G++   G++++G 
Sbjct: 123 REKCRDYAKKQVEGQKADFKRLGVFGDWDKPYLTMNFDFEANAIRVLGRIIKNGHLHKGS 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLL----NEFLPDLGLA 340
           KPVHW     +ALAEAE+EY +   S +I   F         S       +E   D+ + 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYQDKQ-SPAIDVKFTFTDQAALISKFNLADGHEGEGDISIV 241

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AVAV+  L+Y++V+I++                     +Q K  +++
Sbjct: 242 IWTTTPWTLPANRAVAVHEGLEYSLVQIET---------------------EQGKQRLVL 280

Query: 401 ASDLVPTLEAKWGT-KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           ASDLV     ++G  K        GSDLE  +  HP  +   PV++ G+++TT+SGTG V
Sbjct: 281 ASDLVKDAMDRYGVDKFHALGYCQGSDLELLQTNHPFYDFTVPVIL-GEHVTTDSGTGAV 339

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHGQED+V   +Y L + +PV   G +  +   F+G  V    N +V+  L E+ +
Sbjct: 340 HTAPGHGQEDFVVGQQYNLEVANPVGANGVYLPDTELFAGQHVF-KANASVIDVLTEKGA 398

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           L+    + H YP+ WR K P IFRAT QWF S++    RQ ++  I + +W+P
Sbjct: 399 LMHHHAFNHSYPHCWRHKTPIIFRATPQWFVSMDQANLRQDSLSEIKKTQWLP 451



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 122/219 (55%), Gaps = 12/219 (5%)

Query: 562 AIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 620
           ++G V  + PQ+     GAD+LRLWV+S DYT ++ +  ++ ++ +D YR++R T RYLL
Sbjct: 612 SLGNV--ISPQDIMNKMGADILRLWVASTDYTAEMTVSDEIFKRSADRYRRIRNTARYLL 669

Query: 621 GNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDL 679
            NL+ +    + ++ D++  +D++ L +   +   +  +Y+ YQ   + Q +  F  V+L
Sbjct: 670 ANLNGFNPETDMLAADEMVALDRWILDRAAVLQDELVAAYDEYQMLVVTQKLMNFCTVEL 729

Query: 680 SNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT 739
            +FY DV KDR YT    S  RRSCQT L     ++ R +API+   A+++WQ LP    
Sbjct: 730 GSFYLDVIKDRQYTAKADSVARRSCQTALYHIAEAMTRWMAPIMSFTAQEIWQVLP---- 785

Query: 740 LEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILEV 778
              G   EFVF  +W     K  +  +    FW ++LEV
Sbjct: 786 ---GKRDEFVFTGEWYQGLVKADSAKLDNA-FWQQLLEV 820


>gi|170718689|ref|YP_001783409.1| isoleucyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189082325|sp|B0UV12.1|SYI_HAES2 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|168826818|gb|ACA32189.1| isoleucyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 937

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 198/471 (42%), Positives = 279/471 (59%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T F MR +   REP++ K W D  ++ +V + + G+  F+LHDGPPYANG 
Sbjct: 4   YKNTLNLPETGFPMRGDLAKREPDMLKNWYDKNLYQKVREASKGKKTFILHDGPPYANGT 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHA+NKILKDII + K    +   YVPGWDCHGLPIELKV + L     + ++ ++ 
Sbjct: 64  LHLGHAVNKILKDIIMKSKTALGFDTPYVPGWDCHGLPIELKV-EGLVGKPNEKISAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +AK  V+ Q A F R GV  DW+NPYLT++ E EA  I   G++   G++Y+G 
Sbjct: 123 RQACRDYAKEQVEGQKADFIRMGVLGDWDNPYLTMNFETEAEIIRTLGKVIQNGHLYKGS 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL--LNEFLPDLGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F  VSA         L +    L   +W
Sbjct: 183 KPVHWCLDCASSLAEAEVEY-EDKVSPSIYVRFAAVSAAEVEEKFNALGKGQGALSAVIW 241

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA+L+Y +V+                      L D++   +I+A+
Sbjct: 242 TTTPWTLPSNRAIAVNAELEYQLVQ----------------------LGDER---VILAA 276

Query: 403 DLVPTLEAKWGT-KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV  ++      +L I  +  G DLE  R+ HP  +   P+++ GD++T + GTGLVHT
Sbjct: 277 ELVQAVQNALKIEQLEILGSTTGQDLELVRFHHPFYDFSVPIIL-GDHVTVDGGTGLVHT 335

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HGQ+D+V S KYGL +   V ++GKF      F+G  V  + N  V++ L E  +L+
Sbjct: 336 APDHGQDDFVVSKKYGLEMAGLVANDGKFISSTPFFAGKGVF-EANDLVLEKLKETGALL 394

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E    R  A+  I  V+W+P
Sbjct: 395 KLERIKHSYPHCWRHKTPIIFRATPQWFIGMETQDLRIKALSEIKSVRWIP 445



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 110/183 (60%), Gaps = 6/183 (3%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP +     GAD+LRLWV+S DYTG++ +  ++L    D YR++R T R+LL NL+ +  
Sbjct: 612 VPSEVWNKNGADILRLWVASTDYTGEIAVSHKILNSAGDTYRRIRNTARFLLANLNGFDP 671

Query: 629 GNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
            N  ++ +++  +D++A+         I+E+Y++YQF  + Q + RF  +++ +FY D+ 
Sbjct: 672 KNDLVNPEEMISLDRWAVSCALEAQNEIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDII 731

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KDR YT    S  RRSCQT L     ++VR IAPIL   A+++W  LP     +  + AE
Sbjct: 732 KDRQYTTKADSLARRSCQTALWHISEALVRWIAPILSFTADEIWGYLP-----KLDNRAE 786

Query: 748 FVF 750
           FVF
Sbjct: 787 FVF 789


>gi|295105908|emb|CBL03451.1| Isoleucyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 945

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 192/465 (41%), Positives = 274/465 (58%), Gaps = 25/465 (5%)

Query: 110 VDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGNLHMG 168
           ++LPKT F MRAN    EP+    W++ +++ RV +KN DG+ F+LHDGPPYANG +H+G
Sbjct: 1   MNLPKTDFAMRANLPENEPKRLAKWEEERIYERVLEKNKDGKPFILHDGPPYANGPIHIG 60

Query: 169 HALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKA 228
           HA NKILKD +N+    + +   YVPGWDCHG PIE  V ++L  +    +    LR   
Sbjct: 61  HAFNKILKDFVNKSHAQRGFFTPYVPGWDCHGQPIEHMVEKTLGPEKMAKIDQPTLRRLC 120

Query: 229 AKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVH 288
            ++A+  V  Q   FKR GV  DW +PYLT  P YEA  +EVF +M L G +YRG+KP+H
Sbjct: 121 REWAEKYVDVQREGFKRLGVNGDWEHPYLTFTPNYEAGNVEVFKKMYLDGSVYRGRKPIH 180

Query: 289 WSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWT 348
           W     TALAEAE+EY +   S SI+  F+M   P        E   D  + +WTTTPWT
Sbjct: 181 WCKRCHTALAEAEIEYSD-ETSPSIFVKFKMDLMPGMFEAAGAE--GDAYVLIWTTTPWT 237

Query: 349 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 408
           +PAN AV++     Y +V    + +G +   A +       +   +   ++  +D  P  
Sbjct: 238 LPANTAVSLAPDADYVMV----VADGSNMIMARELVEQVAEIAGWESYDLVRGADGEPV- 292

Query: 409 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQE 468
                        L G +     Y  P+       VI GD++T ESGTG VHTAPGHGQ+
Sbjct: 293 ------------ALKGREFTGLTYTCPIRQDLKGTVIYGDHVTLESGTGAVHTAPGHGQD 340

Query: 469 DYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEH 528
           DY+ +L++ +P+L PVDD G  T+EAG F+GLDV  + N A++++L E+ +L+ E+   H
Sbjct: 341 DYLVALEFDVPLLMPVDDNGVLTDEAGPFAGLDV-DEANPAIIEWLRERGTLMAEKKILH 399

Query: 529 KYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIG-QVKWVP 570
            YP+ WR  +P IFRAT+QWF S++    R+ A+DAI  +V+++P
Sbjct: 400 SYPHCWRCHEPVIFRATDQWFVSMDKNSLREDALDAIDHKVEFIP 444



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 117/180 (65%), Gaps = 3/180 (1%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSIS-YD 635
           GADVLRLWV+SVDY+ DV IG ++L + S+ YR++R T+R+LLG+L D+  + ++++ ++
Sbjct: 627 GADVLRLWVASVDYSQDVNIGDEILERTSEAYRRIRNTMRFLLGSLSDFDDLKHTVTDWN 686

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
            L  +DQ+A+ +L +++ ++  +Y+ Y+F  +++ +  +I+ DLS  Y D  KDR+Y+  
Sbjct: 687 ALEPVDQWAMVRLWHLLVDVERAYDEYKFHMVYRAVYDYIVGDLSAVYMDATKDRVYSEA 746

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             S  RR+ QTVL   +  +VRV+AP+L    ++VW++ P A    +G        + WP
Sbjct: 747 PDSPRRRAAQTVLMNIVEVLVRVLAPVLSFTTDEVWEHYPEAIRSREGRPGNVQL-AGWP 805


>gi|238855265|ref|ZP_04645584.1| isoleucine-tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664624|ref|ZP_05865476.1| valyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|313471916|ref|ZP_07812408.1| isoleucine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832157|gb|EEQ24475.1| isoleucine-tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529158|gb|EEQ68159.1| isoleucine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561689|gb|EEX27661.1| valyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
          Length = 930

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 191/470 (40%), Positives = 280/470 (59%), Gaps = 39/470 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N   RE E  K W++++++ +    N+G+  F LHDGPP+ANG
Sbjct: 2   RIKDTLNLGKTKFPMRGNLPNREGEWQKAWEENKLYEQRLKLNEGKPRFDLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPS 222
           N+HMGH+LNKI KDII RYK +  +   +VPGWD HGLPIE ++  Q +D   +K +  +
Sbjct: 62  NIHMGHSLNKISKDIIVRYKNMSGFYAPFVPGWDTHGLPIEQQLAKQGVD---RKTMDRA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           + R    K+A   +  Q   FKR GV ADW++PY+TL P++EA +I VFG+M  +GYIY+
Sbjct: 119 EYRELCRKYAMEQIDKQRTDFKRLGVMADWDHPYITLQPKFEAEEIRVFGKMFEKGYIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G KPV+WSPSS + LAEAE+EY +   S +IY  F++        G+L+    D  + +W
Sbjct: 179 GLKPVYWSPSSESTLAEAEVEYHDVK-SPAIYVAFQVEDG----KGILDN---DTYMVIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P N  + VN K +Y+V+++                        + + F+I  S
Sbjct: 231 TTTPWTIPVNVGITVNPKFEYSVIKVAG----------------------EDRKFVIGTS 268

Query: 403 DLVPTLE-AKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
            L    E  +W    V+  T  G+D +     HP+ ++   +V+   Y+T E GTGLVH 
Sbjct: 269 QLEKVAEDLEWKDYEVV-DTFKGTDFDRMTVKHPLYDKTS-LVMNDTYVTAEDGTGLVHN 326

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVL-GDGNVAVVKYLDEQMSL 520
           A G G++DY    KYGLP+ SP+DD+G++T++    + + V   D N  + K L+E+ +L
Sbjct: 327 ATGFGEDDYNVGKKYGLPVYSPMDDQGRYTKDIPDPNLVGVFYDDANKMITKQLEEKKAL 386

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +    + H YP+DWRTKKP I+RAT QWFASV+ FR   +  I +  + P
Sbjct: 387 LKLSFFTHSYPHDWRTKKPVIYRATTQWFASVDAFRDQILAEIEKANFTP 436



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/158 (41%), Positives = 99/158 (62%), Gaps = 1/158 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+S D T DV +   +L+Q ++ YRK+R TLRY+L N  D+    N ++Y D
Sbjct: 616 GAEIIRLWVASADTTSDVAVSKGILQQNAESYRKIRNTLRYMLANTSDFDPKTNRVAYSD 675

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  IDQY    L  +VK+   +Y+ Y F  +++++ +FI  +LS FY D AKD LY  G 
Sbjct: 676 LRSIDQYMEVLLNKLVKDCLAAYDRYDFTSVYKMVFKFISNELSAFYLDFAKDVLYIEGE 735

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNL 734
            S  RR+ QTV+   L+ + +++ PILPH  E+ W  L
Sbjct: 736 DSLPRRAMQTVIYDALVKLTKIMTPILPHTMEEAWGYL 773


>gi|256827073|ref|YP_003151032.1| isoleucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583216|gb|ACU94350.1| isoleucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 948

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 191/479 (39%), Positives = 273/479 (56%), Gaps = 45/479 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T++LP+T F MRAN    EP   + WDD  ++ +V +KN DGE FVLHDGPPYANG 
Sbjct: 5   YKQTMNLPQTDFPMRANLAQNEPARLQWWDDIDIYHKVLEKNADGEPFVLHDGPPYANGP 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA NKILKD +N+    + +   Y+PGWDCHG PIE +V + +  +    L    +
Sbjct: 65  IHIGHAFNKILKDFVNKSHAQRGFFTPYIPGWDCHGQPIEHEVEKKIGTEKMNSLPQDVI 124

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   V  Q   FKR GV ADW++PYLT  P+YE+A +EVF +M L G +YRG+
Sbjct: 125 RRMCREWADRFVNVQREGFKRLGVNADWDHPYLTFQPDYESANVEVFKRMYLDGAVYRGR 184

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA---V 341
           KP+HW     TALAEAE+EY +  VS SIY  F++ + P     +      D+  A   +
Sbjct: 185 KPIHWCSHCHTALAEAEIEYAD-EVSPSIYVNFKLNNVP----AIFTRAGVDVERAFVLI 239

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN AV++   + Y  VE                            +F+++A
Sbjct: 240 WTTTPWTLPANTAVSLGPDIDYCFVEADG-------------------------IFMLLA 274

Query: 402 SDLVPTLE--AKWGTKLVIKKT-----LAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
            ++V ++   A W    V+        L G+  E   Y  P+ ++    +I GD++T E+
Sbjct: 275 HEMVESIAEVAGWNNWRVVSAQGEPVLLKGNKFEGITYQTPILHQVEGRIIWGDHVTLEA 334

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           GTG VHTAPGHG +DY+   ++G+ ++ PVDD+G   +    F GL    + N  ++++L
Sbjct: 335 GTGAVHTAPGHGVDDYLVGQQFGVEMIMPVDDDGHLMDYVPHFGGLST-DEANPKIIEWL 393

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 570
            E+  L+      H YP+ WR   P IFRAT+QWF S++  G R  A+DAI  +V WVP
Sbjct: 394 REKGMLVASVEITHSYPHCWRCHNPVIFRATDQWFVSMDDTGLRAKALDAIRTKVNWVP 452



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 108/170 (63%), Gaps = 2/170 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDW--R 627
           P Q A  YGADVLRLWV+S DY+ DV +G  +L + SD YR+ R T R+LLG+L D+   
Sbjct: 628 PAQVANKYGADVLRLWVASTDYSVDVSVGESILARTSDAYRRFRNTFRFLLGSLADFDPE 687

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
                S+D L   DQ+AL +L  ++ ++   Y+ YQ+ ++F+ +  +++ DLS  Y D  
Sbjct: 688 TDAVASFDSLLPADQWALVRLARLLDDVNAGYDLYQYHRVFRALYDYVVGDLSAVYLDAL 747

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFA 737
           KDRLY    TS  RRS QTVL A L ++VR+++PIL    E+VWQ+ P A
Sbjct: 748 KDRLYAEAPTSPARRSAQTVLMAILDTMVRIMSPILSFTCEEVWQHYPSA 797


>gi|444377639|ref|ZP_21176848.1| Isoleucyl-tRNA synthetase [Enterovibrio sp. AK16]
 gi|443678223|gb|ELT84895.1| Isoleucyl-tRNA synthetase [Enterovibrio sp. AK16]
          Length = 942

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 197/473 (41%), Positives = 281/473 (59%), Gaps = 34/473 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           +K T++LP+T F MR N   REP++ K W D  ++  +     G+ +F+LHDGPPYANGN
Sbjct: 4   FKDTLNLPETAFPMRGNLAQREPQMLKRWYDEDLYGEIRKAKKGKKSFILHDGPPYANGN 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH++NKILKDII + K L ++   YVPGWDCHGLPIEL V + + +  +K ++ ++ 
Sbjct: 64  IHIGHSVNKILKDIIIKSKTLSDFDAPYVPGWDCHGLPIELMVEKKVGKPGQK-VSAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q A FKR GV  +W+ PYLT+D + EA  I   G+++  G++++G 
Sbjct: 123 RQKCREYAAKQVEGQKADFKRLGVLGEWDKPYLTMDFDTEANIIRALGKIAGNGHLHKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL-LNEFLP---DLGLA 340
           KPVHW     +ALAEAE+EY    VS SI  +F  V      S   LNE      D+ + 
Sbjct: 183 KPVHWCTDCGSALAEAEVEY-YNKVSPSIDVMFGAVDEAAVLSKFNLNEGHAGQGDVSIV 241

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AVAV+  L+Y +V++    EG++                     +I+
Sbjct: 242 IWTTTPWTLPANRAVAVSDALEYVLVQV----EGETPRR------------------LIM 279

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSD-LENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           A++L   +  + G +          D LE  R+ HP  +   PV++ GD++TTESGTG+V
Sbjct: 280 AAELAKDVMDRAGIEHFHNLGFCKGDALELLRFNHPFYSFDVPVIL-GDHVTTESGTGVV 338

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHGQED+    KY L + +PV   G +  +   F+G  VL   N  VV+ L E  +
Sbjct: 339 HTAPGHGQEDFAVGQKYNLEVANPVGSNGVYLPDTELFAGQHVL-KANDNVVEVLKEHGA 397

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           L+    YEH YP+ WR K P IFRAT QWF S+E  G R  A++ I  V+W+P
Sbjct: 398 LLHHHAYEHSYPHCWRHKTPIIFRATPQWFISMEKAGLRAKALEEIKNVQWIP 450



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 119/206 (57%), Gaps = 11/206 (5%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG V  V PQ+     G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 600 TVDGQGRKMSKSIGNV--VSPQDVMNKLGGDILRLWVASTDYTGEMTVSDEILKRSADAY 657

Query: 610 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +    + ++ +DL + D++A+ +     + I +++E   F  + 
Sbjct: 658 RRIRNTARFLLANLNGFNPETDMVAAEDLVVADRWAVGKALEAQEEIVKAFEECNFHAVT 717

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + +F  V++ +FY D+ KDR YT        RSCQT L   + ++VR +API+   A+
Sbjct: 718 QRLMQFCSVEMGSFYLDIIKDRQYTAKAGGHAHRSCQTALFHIVEALVRWMAPIMSFTAD 777

Query: 729 DVWQNLPFAYTLEDGSAAEFVFESKW 754
           ++W  +P       G+  +FVF   W
Sbjct: 778 EIWNEMP-------GNRNKFVFTEVW 796


>gi|417841223|ref|ZP_12487327.1| Isoleucyl-tRNA synthetase [Haemophilus haemolyticus M19501]
 gi|341949261|gb|EGT75865.1| Isoleucyl-tRNA synthetase [Haemophilus haemolyticus M19501]
          Length = 941

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 196/471 (41%), Positives = 280/471 (59%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T F MR +   REP + K W D Q++ ++     G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETGFPMRGDLAKREPVMLKNWYDKQLYQKIRQATKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + +T ++ 
Sbjct: 65  IHIGHAVNKILKDIIVKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKVTAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++   EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFNTEANIIRTLGKVIANGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL--LNEFLPDLGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F  V+A         + +    L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPAVNAAEIEEKFNAVGKGHGKLSAVIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + V +  ++ G  LE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKSVGVEQVEVLGSVKGQALELVRFNHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++   KY LP+   V ++GKF      F+G  V  + N  VV+ L E  +L+
Sbjct: 337 APDHGLDDFIVGQKYNLPMAGLVSNDGKFISTTEFFAGKGVF-EANPLVVEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 124/202 (61%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +    +++  +++  +D++A+    +  K I+++Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPQRDAVKPEEMISLDRWAVACALDAQKEIKDAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++W  LP   T      AEFVF
Sbjct: 774 EIWGYLPQTAT----PRAEFVF 791


>gi|429760481|ref|ZP_19292952.1| isoleucine--tRNA ligase [Veillonella atypica KON]
 gi|429177313|gb|EKY18646.1| isoleucine--tRNA ligase [Veillonella atypica KON]
          Length = 944

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 198/484 (40%), Positives = 285/484 (58%), Gaps = 50/484 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFL-RVADKNDGENFVLHDGPPYANGN 164
           Y  T+ LP+T F MR N   REPEI K W+D++++  R+  + D + F+LHDGPPYANG 
Sbjct: 3   YGKTLHLPETEFPMRGNLPKREPEILKFWEDNKIYQKRLELRKDAKPFILHDGPPYANGK 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHALNK LKDII +YK +  +  RY+PGWD HGLPIE  V+++   + + ++ P  L
Sbjct: 63  LHIGHALNKTLKDIIMKYKTMTGHYTRYIPGWDTHGLPIEHAVIKNTGLN-RHEMAPLDL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R+GV  +W  PYLTL PE+E  Q+ +FG+M+ +G+IY+G 
Sbjct: 122 RNKCKEYALECVENQKQDFIRFGVLGEWERPYLTLRPEFEVKQLGIFGEMAKRGHIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV-WT 343
           K V+W     TALAEAE+EY E   S SIY  F  VS    T  L     P    +V WT
Sbjct: 182 KTVYWCTHCETALAEAEIEYAEKK-SFSIYVKFPYVSEKKVT--LPAGVDPKQAYSVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A++VN +L+Y  V++     GD                     + ++A++
Sbjct: 239 TTPWTMPANVAISVNPELEYGWVKV-----GDE--------------------YYLMATE 273

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV       G +   I    +G+DLE   + HP   R    V+ GD++T E+GTG VHTA
Sbjct: 274 LVDAAMKDIGIEDYEIVNRFSGADLELAEFKHPFVERNA-TVLCGDHVTLEAGTGCVHTA 332

Query: 463 PGHGQEDYVTSLKYG------LPILSPVDDEGKFTEEAGK---------FSGLDVLGDGN 507
           P HG++D+   ++Y       LPI+S V++ G +T++             +G+++  D  
Sbjct: 333 PAHGEDDFNIVMRYNKEGKTELPIVSLVNETGNYTKQVDDNRYGDTEFPLTGVEI-HDAE 391

Query: 508 VAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQV 566
           V V+K L    +L+ +    H+Y + WR K P I+RATEQWF+SV+G+RQ A+DAI  QV
Sbjct: 392 VPVIKILAHNNALLHKSSLRHQYAHCWRCKNPVIYRATEQWFSSVDGYRQQALDAIDNQV 451

Query: 567 KWVP 570
           +W+P
Sbjct: 452 QWIP 455



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 112/180 (62%), Gaps = 6/180 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGADV+RLWVSS DY  DV +   +++Q+S++YRK+R T R+LLGNL D+    + ++Y 
Sbjct: 634 YGADVMRLWVSSADYQADVRLSKDIVKQLSEVYRKIRNTFRFLLGNLDDFNPNTDKVAYA 693

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+   D++ L +LE + + + ++YE+Y+F  ++  I  F  VDLS+ Y DV KD +Y   
Sbjct: 694 DMSEFDKWVLLRLEEVRQKVTDAYENYEFHMLYHAIHNFCTVDLSSIYLDVMKDTMYAES 753

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             +  RRS QT +   L ++V +++P+L   AE+VW+ +P     EDG   E V    WP
Sbjct: 754 KNNVARRSAQTAMYEILKTLVAMVSPVLSFTAEEVWKYMP----KEDG-MPESVMLQDWP 808


>gi|343519731|ref|ZP_08756708.1| isoleucine--tRNA ligase [Haemophilus pittmaniae HK 85]
 gi|343392358|gb|EGV04926.1| isoleucine--tRNA ligase [Haemophilus pittmaniae HK 85]
          Length = 941

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 196/471 (41%), Positives = 281/471 (59%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T F MR +   REP + K W D Q++ ++     G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETGFPMRGDLAKREPVMLKNWYDKQLYQKIRQATKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + +T ++ 
Sbjct: 65  IHIGHAVNKILKDIIVKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKITAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIANGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL--LNEFLPDLGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F  VSA         + +    L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPAVSAVEIEEKFNAVGKGHGKLSAVIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + V +  ++ G  LE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGVEQVEVLGSVKGQALELVRFNHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++   KY LP+   V ++GKF      F+G  V  + N  VV+ L E  +L+
Sbjct: 337 APDHGLDDFIVGQKYNLPMAGLVSNDGKFISTTEFFAGKGVF-EANPLVVEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I +V+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKRVRWIP 446



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 125/202 (61%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +    +++  +++  +D++A+    +  K I+E+Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPQRDAVKPEEMISLDRWAVACALDAQKEIKEAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++W +LP   T      AEFVF
Sbjct: 774 EIWGHLPQTAT----PRAEFVF 791


>gi|295692697|ref|YP_003601307.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030803|emb|CBL50282.1| Isoleucyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 928

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 205/473 (43%), Positives = 286/473 (60%), Gaps = 47/473 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           R K T++L KT F MR N  VRE E  K W+D++++ +    N+G+  F LHDGPP+ANG
Sbjct: 2   RIKDTLNLGKTKFKMRGNLPVREAEWQKEWEDNKLYEQRLKLNEGKPRFDLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQ-SLDEDAKKDLTPS 222
           N+HMGHALNKI KDII RYK +  Y   YVPGWD HGLP+E ++ +  +D   +K +  +
Sbjct: 62  NIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLPVEQQLAKKGID---RKTMDRA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           K R    +FA+  V+ QM  FKR GV ADW++PY+TL PE+EAA+I VFG+M  +GYIY+
Sbjct: 119 KYRELCRQFAQEQVEKQMTDFKRLGVMADWDHPYITLQPEFEAAEIRVFGEMFKKGYIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           GKKPV+WS SS + LAEAE+EY +    R IY  F ++       G+L+    D  L +W
Sbjct: 179 GKKPVYWSWSSESTLAEAEVEYHDIKSPR-IYVAFPILDG----KGILDS---DTSLVIW 230

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N  + VN K  Y VVE+                       D+K V   + S
Sbjct: 231 TTTPWTIPSNVGITVNPKFDYDVVEVN----------------------DKKYV---IGS 265

Query: 403 DLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           D +P +    G K   + KTL G+D +   Y HP+ +    +V+   Y+T + GTGLVH 
Sbjct: 266 DRLPAVAEDLGWKDYKVLKTLKGTDFDRMTYKHPLYD-VTGLVMNDTYVTDDDGTGLVHN 324

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLG----DGNVAVVKYLDEQ 517
           A G G++DY    +YGLP+ SP+D +G+FT+E       D++G    D N  V   L + 
Sbjct: 325 ATGFGEDDYNVGRRYGLPVFSPMDAQGRFTDEV---PDPDLVGMFYDDANKVVADKLKKA 381

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +L+  + + H YP+DWRTKKP I+RAT QWFAS++ FR   +D I +  ++P
Sbjct: 382 GALLKLDFFTHSYPHDWRTKKPVIYRATTQWFASIDKFRDQILDQIKKASFIP 434



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 98/155 (63%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS-ISYDD 636
           GA+++RLWV+  D T DV +   +L+Q ++ YRK+R T RY+L N  D+    S ++YDD
Sbjct: 614 GAEIIRLWVAQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKESRVAYDD 673

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY   +L +++K+   +Y+ + F  +F+ + +FI  DLS FY D AKD LY  G 
Sbjct: 674 LRSVDQYMEVKLNDLIKDCIAAYDKFDFTDVFKKVFKFISNDLSAFYLDFAKDVLYIDGQ 733

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S  RRS QTV+    + + +++ PILPH  E++W
Sbjct: 734 DSHARRSMQTVIYDAAVKLAKILTPILPHTMEEIW 768


>gi|339624589|ref|ZP_08660378.1| isoleucyl-tRNA synthetase [Fructobacillus fructosus KCTC 3544]
          Length = 932

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 205/472 (43%), Positives = 276/472 (58%), Gaps = 43/472 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVF-LRVADKNDGENFVLHDGPPYANG 163
           +YK T++L KT F MR +    EPE  K+W D  ++  R+A      +F LHDGPPYANG
Sbjct: 2   KYKETLNLGKTAFPMRGSLPKTEPEREKVWFDEDLYGQRLAQNEKKPHFNLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           N+H+GHALNKI KDII R+K +  +   YVPGWD HGLPIE ++ ++  +  +K +  +K
Sbjct: 62  NIHLGHALNKITKDIIVRFKNMSGFYAPYVPGWDTHGLPIEQQLTKAGYD--RKSMPKAK 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R  A  FA   V  Q   FKR GV ADW++PY+TL PEYEAAQ+ VFG+M+ +GYI++G
Sbjct: 120 WRNLAKDFALEQVAKQKKDFKRLGVLADWDHPYITLQPEYEAAQLRVFGEMAKKGYIFKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WS SS +ALAEAE+EY +   +   YA     +      G+L+    D  L VWT
Sbjct: 180 AKPVYWSWSSESALAEAEIEYHDLKSTSLFYA-----NRVKDGKGVLDN---DTYLVVWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTP+TV A+  V V     Y VV+           PA +  +             +VA D
Sbjct: 232 TTPFTVTASRGVTVGPDFDYVVVK-----------PAGQDKK------------YVVAKD 268

Query: 404 LVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ T+  K+G     + +   GS+LEN    HP D     VV+ GD++T +SGTGLVHTA
Sbjct: 269 LLETVAPKFGWEDYEVLEEHKGSELENITAYHPWDKDVDEVVMVGDHVTLDSGTGLVHTA 328

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAG-KFSGL---DVLGDGNVAVVKYLDEQM 518
           PG G++DY  S  YGL +   VD++G  T+ AG  F G    DV G     V+  L E  
Sbjct: 329 PGFGEDDYNVSKPYGLEVAVTVDEKGMMTKSAGPDFEGRFYDDVTG----TVITKLQEAG 384

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             + +E   H YP+DWRTKKP I+RA  QWFAS++GFRQ  +D +  V + P
Sbjct: 385 LFLAKESITHSYPFDWRTKKPIIWRAVPQWFASIDGFRQEILDQLDNVNFYP 436



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 10/198 (5%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +     G ++LRLW  +VD + D+ +  ++L+Q++D YRK+R T+R+LL N  D+   
Sbjct: 608 PAEVGDQLGVEILRLWTITVDTSQDMPVSQEILKQVADSYRKIRNTMRFLLANTSDFNYA 667

Query: 630 -NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
            +++ ++     D+YA   L +++K I E+Y +Y+F  +F  +  FI VDLS FY DVAK
Sbjct: 668 KDAVPFEKREAHDKYATIVLNDLIKGIEEAYANYRFNDVFSKLINFINVDLSAFYLDVAK 727

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP-----FAYTLEDG 743
           D +Y     S  RRS QTV    + ++ ++I P+LPH AE++W  LP     FAY  +  
Sbjct: 728 DVVYVEAPDSKQRRSMQTVFYETVQALTKLILPVLPHTAEEIWTYLPDDSTKFAYLQDMP 787

Query: 744 SAAEFV----FESKWPVL 757
            A EF      +SKW  +
Sbjct: 788 EAKEFPEAADIKSKWQTI 805


>gi|323497796|ref|ZP_08102810.1| isoleucyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323317143|gb|EGA70140.1| isoleucyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 942

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 198/473 (41%), Positives = 280/473 (59%), Gaps = 34/473 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W    ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLANREPEMLKRWYKEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V +   +  +K ++ ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKKGKPGQK-ISAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  K+A   V+ Q  SFKR G+  +W+ PY T+D   EA  I   G+++  G++ +G 
Sbjct: 123 REECRKYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFTTEANIIRALGKIADNGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL-LNEFLP---DLGLA 340
           KPVHW     +ALAEAE+EY +  VS SI   F+   A    S   LNE      D+ + 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVRFKAADAAALLSKFDLNEGHEGEGDISIV 241

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AV +   L+Y ++++    EG+S                  K  IIV
Sbjct: 242 IWTTTPWTLPANRAVCLRDDLEYVLIQV----EGES------------------KERIIV 279

Query: 401 ASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           AS+L   +  + G +       A G+DLE  ++ HP  +   P ++ GD++TT+SGTG+V
Sbjct: 280 ASELAKDVMDRAGIEHFHNLGFAKGADLELSQFQHPFYDFTVPAIL-GDHVTTDSGTGVV 338

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHGQED+    KYGL + +PV   G +  +   F+G  V    N AVV+ L E+ +
Sbjct: 339 HTAPGHGQEDFAVGNKYGLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVVETLKEKGA 397

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+++I  V+W+P
Sbjct: 398 LLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKGVEWMP 450



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 115/205 (56%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 601 VDGQGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 658

Query: 611 KLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL  +      +  +++  +D++A+ +     + I ++Y  Y    + Q
Sbjct: 659 RIRNTARFFLANLSGFNPATDLVPAEEMVALDRWAVGRALAAQEEIVKAYGEYNTHAVTQ 718

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 719 RLMQFCSIEMGSFYLDVIKDRQYTAKLGGHAQRSCQTALYYIVEALVRWMAPIMSFTADE 778

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 779 IWNEMP-------GERDKFVFTGEW 796


>gi|416999687|ref|ZP_11940107.1| isoleucine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
 gi|333976493|gb|EGL77360.1| isoleucine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
          Length = 944

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 198/484 (40%), Positives = 286/484 (59%), Gaps = 50/484 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFL-RVADKNDGENFVLHDGPPYANGN 164
           Y  T+ LP+T F MR N   REPEI K W+D++++  R+  + D + F+LHDGPPYANG 
Sbjct: 3   YGKTLHLPETEFPMRGNLPKREPEILKFWEDNKIYQKRLELRKDAKPFILHDGPPYANGK 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHALNK LKDII +YK +  + +RY+PGWD HGLPIE  V+++   + + ++ P  L
Sbjct: 63  LHIGHALNKTLKDIIMKYKTMTGHYIRYIPGWDTHGLPIEHAVIKNTGLN-RHEMAPLDL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R+GV  +W+ PYLTL PE+E  Q+ +FG+M+ +G+IY+G 
Sbjct: 122 RNKCKEYALECVETQKQDFIRFGVLGEWDRPYLTLRPEFEVKQLGIFGEMAKRGHIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV-WT 343
           K V+W     TALAEAE+EY E   S SIY  F  VS    T  L     P    +V WT
Sbjct: 182 KTVYWCTHCETALAEAEIEYAEKK-SFSIYVKFPYVSEKKVT--LPAGVDPKQAYSVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A++VN +L+Y  V+      GD                     + ++A++
Sbjct: 239 TTPWTMPANVAISVNPELEYGWVKA-----GDE--------------------YYLMATE 273

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV       G +   I    +G+DLE   + HP   R    V+ GD++T E+GTG VHTA
Sbjct: 274 LVDAAMKDIGIEDYEIVNRFSGADLELAEFKHPFVERT-STVLCGDHVTLEAGTGCVHTA 332

Query: 463 PGHGQEDYVTSLKYG------LPILSPVDDEGKFTEEAGK---------FSGLDVLGDGN 507
           P HG++D+   ++Y       LPI+S V++ G +T++             +G+++  D  
Sbjct: 333 PAHGEDDFNIVMRYNKEGKTELPIVSLVNETGNYTKQVDDNRYGDTEFPLAGVEI-HDAE 391

Query: 508 VAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQV 566
           V V+K L    +L+ +    H+Y + WR K P I+RATEQWF+SV+G+RQ A+DAI  QV
Sbjct: 392 VPVIKILAHNNALLHKSSLRHQYAHCWRCKNPVIYRATEQWFSSVDGYRQQALDAIDNQV 451

Query: 567 KWVP 570
           +W+P
Sbjct: 452 QWIP 455



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 112/180 (62%), Gaps = 6/180 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGADV+RLWVSS DY  DV +   +++Q+S++YRK+R T R+LLGNL D+    + ++Y 
Sbjct: 634 YGADVMRLWVSSADYQADVRLSKDIVKQLSEVYRKIRNTFRFLLGNLDDFNPNTDKVAYA 693

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+   D++AL +LE + + + ++YE+Y+F  ++  I  F  VDLS+ Y DV KD +Y   
Sbjct: 694 DMSEFDKWALLRLEEVRQKVTDAYENYEFHMLYHAIHNFCTVDLSSIYLDVMKDTMYAES 753

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             +  RRS QT +   L ++V +++P+L   AE+VW+ +P     ++    E V    WP
Sbjct: 754 KDNVARRSAQTAMYEILKTLVAMVSPVLSFTAEEVWKYMP-----KEEGMRESVMLQDWP 808


>gi|218779617|ref|YP_002430935.1| isoleucyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218761001|gb|ACL03467.1| Isoleucyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 932

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 199/473 (42%), Positives = 280/473 (59%), Gaps = 42/473 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T++LPKT+F M+AN   +EP + + WD   ++  +  + +G   F+LHDGPPYANGN
Sbjct: 3   YKKTLNLPKTSFPMKANLSQKEPVMLENWDKADMYNSLRKEAEGRTRFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G ALNKILKDII R + +  +   YVPGWDCHGLPIE  V + L +  K D+T  ++
Sbjct: 63  IHIGTALNKILKDIIIRSRNMAGFDAIYVPGWDCHGLPIEHNVDKELGK-KKADMTQVQI 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  K+A+  +  Q   FKR GVW +WNNPYLT++ +YEA  +   G+ +  G ++RGK
Sbjct: 122 RQECRKYAERFIDIQRGEFKRLGVWGEWNNPYLTMNYKYEADIMRECGKFADNGALFRGK 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVF----RMVSAPPSTSGLLNEFLPDLGLA 340
           KPV+W    +TALAEAE+EY E   S SI+  F        A P  +G        + + 
Sbjct: 182 KPVYWCNRCQTALAEAEVEY-EDEKSPSIFVKFAADDDFAQAIPELAG------KKVFVV 234

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+P N A+ ++   +Y+ VE+     GD                      +I+
Sbjct: 235 IWTTTPWTLPGNLAICLHPDFEYSAVEVN----GDEV--------------------LIL 270

Query: 401 ASDLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           ASDLV +    +G +   +  T A S LE     HP  +R+  +V+ G+++T E+GTG V
Sbjct: 271 ASDLVESNMKDFGIEDYKVLATFASSVLERKTCRHPFYDRESLMVL-GNHVTLEAGTGCV 329

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHG+EDY   L YGL   SPV+D+G F ++   F+G  V    N  V+  L E  +
Sbjct: 330 HTAPGHGREDYEVGLAYGLEPYSPVNDKGCFEDDVEFFAGQFVF-KANENVIAKLKENNA 388

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           LI+ +  EH YP+ WR K+  IFRAT QWF S++  G R+AA+  I QVKWVP
Sbjct: 389 LILSKGLEHSYPHCWRCKQSVIFRATPQWFISMDKTGLRKAALTEIDQVKWVP 441



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 111/168 (66%), Gaps = 6/168 (3%)

Query: 574 APG-----YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR- 627
           APG     +GA++LRLWVS+ DY  D+ I  ++L+Q+SD YR++R T R++LGNL D+  
Sbjct: 613 APGKVIKSHGAEILRLWVSAADYRDDIRISDEILKQLSDAYRRIRNTCRFILGNLGDFDP 672

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             +++  D +  ID+YA+ +L+ +++  + +Y+ ++F  I+  +  F  VDLS FY D+ 
Sbjct: 673 QKDAVEQDMMLEIDRYAMHKLQGLIRRCKAAYDEFEFHVIYHALHNFCSVDLSAFYLDIL 732

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KDRLY     S  RRS QTVL   + +IV+++AP+L   AE+V++ +P
Sbjct: 733 KDRLYVSPPGSHARRSAQTVLYKLIDAIVKLMAPVLSFTAEEVYEYMP 780


>gi|332295648|ref|YP_004437571.1| isoleucyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178751|gb|AEE14440.1| Isoleucyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 918

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 192/466 (41%), Positives = 285/466 (61%), Gaps = 37/466 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLR-VADKNDGENFVLHDGPPYANGN 164
           YK T+ LPKT F M+A    REPE+ K W    VF + V  + + E F+LHDGPPYANG+
Sbjct: 4   YKKTLKLPKTNFPMQARLTQREPELLKKWQKENVFEKAVKLRVNNEFFLLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A NKILKD+IN+Y +++     YVPGWDCHGLPIE + L++L + +KK+ T + +
Sbjct: 64  IHLGTAFNKILKDMINKYYMIKGKYTPYVPGWDCHGLPIEFQALKTLGK-SKKEFTVTDI 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    + A   +  Q   F R GV+  W+ PY+T+DP+YEA QI +F +M  +GYIY+G 
Sbjct: 123 RKMCQEHALKFIDRQRKQFIRLGVFGYWDKPYITMDPKYEAMQIRIFWEMYKKGYIYKGL 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV W PS  TALAEAE+EY +   S SI+  F +V       G+L++   D+ L +WTT
Sbjct: 183 KPVFWCPSCETALAEAEVEYYDT-TSPSIFVKFPVVDG----KGVLDK--GDMIL-IWTT 234

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+ +N  +AV +   Y +V+++           N++              I+VA + 
Sbjct: 235 TPWTLISNKGLAVKSDSLYDLVQVK-----------NER--------------ILVAKER 269

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
           +  LE   GT  V+ KT+ G DLE     +P+   +  +V+   +++ E G+G+VH APG
Sbjct: 270 LKALEEILGTYEVV-KTVNGEDLEGIIASNPLFPEKRSIVVTAPFVSMEDGSGIVHMAPG 328

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEE 524
           HG EDY+  ++  L + S ++D+G FT+EA +F  L  + D + AV++ L++   L+ + 
Sbjct: 329 HGPEDYIIGIQKNLEVESLLNDQGVFTKEAQRFENL-FVHDASKAVIEDLEKNGFLLSKS 387

Query: 525 PYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             EH YP+ WR K   I+RATEQWFASV+ FR+ A+ A  +V+W+P
Sbjct: 388 EVEHSYPHCWRCKGKLIYRATEQWFASVDAFREEALRATKEVRWIP 433



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 111/179 (62%), Gaps = 8/179 (4%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
           GADVLR+WV+S DYTGDV I  ++L Q SD Y+KLR T+RY+L  L+D+   +SIS D  
Sbjct: 613 GADVLRIWVASSDYTGDVAISDRILEQQSDTYKKLRNTIRYMLSLLNDFNPKDSISPDRW 672

Query: 638 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
             +D+Y   +  ++++ I + + +YQF+K+   I+ F+ +DLS FY DV KDRLY G  +
Sbjct: 673 LDLDRYIYSEFNDLIQEIDQYFYNYQFYKMLYKIKSFMTIDLSAFYLDVLKDRLYAGFDS 732

Query: 698 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLE-DGSAAEFVFESKWP 755
              R+S QTV+   L  ++ ++ PI+   +E+ W      Y  E D +  E VF + +P
Sbjct: 733 E--RKSAQTVIYRMLKDLLIILCPIISFTSEEAW-----GYLREFDNTLPESVFFASYP 784


>gi|269797242|ref|YP_003311142.1| isoleucyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269093871|gb|ACZ23862.1| isoleucyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 944

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 199/484 (41%), Positives = 284/484 (58%), Gaps = 50/484 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFL-RVADKNDGENFVLHDGPPYANGN 164
           Y  T+ LP+T F MR N   REPEI K W+D++++  R+  + D + F+LHDGPPYANG 
Sbjct: 3   YGKTLHLPETEFPMRGNLPKREPEILKFWEDNKIYQKRLELRKDAKPFILHDGPPYANGK 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHALNK LKDII +YK +  +  RY+PGWD HGLPIE  V+++   + + ++ P  L
Sbjct: 63  LHIGHALNKTLKDIIMKYKTMTGHYTRYIPGWDTHGLPIEHAVIKNTGLN-RHEMAPLDL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R+GV  +W+ PYLTL PE+E  Q+ +FG+M+ +G+IY+G 
Sbjct: 122 RNKCKEYALECVETQKQDFIRFGVLGEWDRPYLTLRPEFEVKQLGIFGEMAKRGHIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV-WT 343
           K V+W     TALAEAE+EY E   S SIY  F  VS    T  L     P    AV WT
Sbjct: 182 KTVYWCTHCETALAEAEIEYAEKK-SFSIYVKFPYVSEKKVT--LPAGVDPKQAYAVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A++VN  L+Y  V+      GD                     + ++A++
Sbjct: 239 TTPWTMPANVAISVNPDLEYGWVKA-----GDE--------------------YYLMATE 273

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV       G +   I    +G+DLE   + HP   R    V+ GD++T E+GTG VHTA
Sbjct: 274 LVDAAMKDIGIEDYEIVNRFSGADLELAEFKHPFVERT-STVLCGDHVTLEAGTGCVHTA 332

Query: 463 PGHGQEDYVTSLKYG------LPILSPVDDEGKFTEEAGK---------FSGLDVLGDGN 507
           P HG++D+   ++Y       LPI+S V++ G +T++             +G+++  D  
Sbjct: 333 PAHGEDDFNIVMRYNKEGKTELPIISLVNETGNYTKQVDDNRYGDTEFPLAGVEI-HDAE 391

Query: 508 VAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQV 566
           V V+K L    +L+ +    H+Y + WR K P I+RATEQWF+SV+G+RQ A+DAI  QV
Sbjct: 392 VPVIKILAHNNALLHKSSLRHQYAHCWRCKNPVIYRATEQWFSSVDGYRQQALDAIDNQV 451

Query: 567 KWVP 570
           +W+P
Sbjct: 452 QWIP 455



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 112/180 (62%), Gaps = 6/180 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGADV+RLWVSS DY  DV +   +++Q+S++YRK+R T R+LLGNL D+    + ++Y 
Sbjct: 634 YGADVMRLWVSSADYQADVRLSKDIVKQLSEVYRKIRNTFRFLLGNLDDFNPNTDKVAYA 693

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+   D++AL +LE + + + ++YE+Y+F  ++  I  F  VDLS+ Y DV KD +Y   
Sbjct: 694 DMSEFDKWALLRLEEVRQKVTDAYENYEFHMLYHAIHNFCTVDLSSIYLDVMKDTMYAES 753

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             +  RRS QT +   L ++V +++P+L   AE+VW+ +P     ++    E V    WP
Sbjct: 754 KNNVARRSAQTAMYEILKTLVAMVSPVLSFTAEEVWKYMP-----KEEGMRESVMLQDWP 808


>gi|376295179|ref|YP_005166409.1| isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
 gi|323457740|gb|EGB13605.1| isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 938

 Score =  355 bits (912), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 198/470 (42%), Positives = 277/470 (58%), Gaps = 36/470 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ LP+TTF M+AN   REPE+ K W++ + +  +    D ++ +VLHDGPPYANG+
Sbjct: 4   YKKTLLLPQTTFPMKANLTQREPEMLKFWEEIKAYDEMVAAGDPDDRYVLHDGPPYANGH 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMG ALNK+LKDII + + +Q  K  YVPGWDCHGLPIE KV Q L +   K+L    +
Sbjct: 64  IHMGTALNKVLKDIIVKSRNIQGQKAEYVPGWDCHGLPIEHKVEQEL-KKKNKELDTLTI 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A   +  Q   FKR GV+  W++PY+T+ PEYEAA     G+   +  + RGK
Sbjct: 123 RKICRSYAAKWLDTQRQEFKRLGVFGVWDDPYMTMKPEYEAATARELGRFMERDGVVRGK 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KP++W     TALAEAE+EY E H S SIY  F M  A  +   + +  +  L + +WTT
Sbjct: 183 KPIYWCCDCHTALAEAEVEY-EDHTSPSIYVRFPM--ADENFKKITDIDVSSLYILIWTT 239

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P N AVAV+    Y +V+      GD                     + ++A  L
Sbjct: 240 TPWTIPDNMAVAVHPDFDYVLVQTG----GD---------------------YYVLAEAL 274

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + +   K+G        T  G+DLE  R  HP+ +R  PVV+  DY+T ++GTG VHTAP
Sbjct: 275 LESCAGKFGWESWETLATFRGADLEGMRAKHPIYDRPSPVVL-ADYVTLDTGTGCVHTAP 333

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+ED+ T L+YGL I SP+++ G+F  E   F+GL+V  + N  V++ L E  +L+  
Sbjct: 334 GHGREDFETGLRYGLEIYSPMNNRGEFLNEVEFFAGLNVW-EANPKVIEKLTELGNLMAS 392

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAI-GQVKWVP 570
           E   H YP+ WR K+P IFRAT QWF  ++    R+ A+ AI   V+W+P
Sbjct: 393 EKITHSYPHCWRCKQPVIFRATTQWFIGMDENNLRKRALKAIRNDVEWIP 442



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 113/194 (58%), Gaps = 5/194 (2%)

Query: 545 TEQWFASVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLR 603
           T  +    EG + +   +IG V  + PQE    +GA++LR+WVS+ +Y  D+ I  + L 
Sbjct: 595 THGYVVDAEGRKMSK--SIGNV--LAPQEIIDKFGAEILRMWVSASNYQEDIRISDETLS 650

Query: 604 QMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQ 663
           ++ D YR++R T RYLL NL D+   + ++  D+P +D+YAL  +      IR +Y  ++
Sbjct: 651 RLVDAYRRIRNTCRYLLSNLSDFDPADKVAVADMPPLDRYALDMVVRQHDAIRTAYRRFE 710

Query: 664 FFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPIL 723
           F K++  +    +VDLS FY D+ KDRLY        RRS QTVL   LL ++  +AP+L
Sbjct: 711 FHKVYHTLHNLCVVDLSAFYLDIIKDRLYVEERDGLKRRSAQTVLWQILLMLLEDMAPVL 770

Query: 724 PHLAEDVWQNLPFA 737
              AE+ +Q+LP A
Sbjct: 771 SFTAEEAFQDLPEA 784


>gi|343514743|ref|ZP_08751811.1| isoleucyl-tRNA synthetase [Vibrio sp. N418]
 gi|342799480|gb|EGU35044.1| isoleucyl-tRNA synthetase [Vibrio sp. N418]
          Length = 946

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 199/477 (41%), Positives = 283/477 (59%), Gaps = 39/477 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP T F MR N   REPE+ + W    ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPDTGFPMRGNLANREPEMLERWYKEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   YVPGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q  SFKR G+  +W+ PY T+D   EA  I   G+++ +G++ +G 
Sbjct: 123 REKCREYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANIIRALGKIADKGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF-LPD------- 336
           KPVHW     +ALAEAE+EY +  VS SI   F    A    + +L +F L D       
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVKF----AATDEAAVLAKFALADGHAGEGE 237

Query: 337 LGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKV 396
           L + +WTTTPWT+PAN AV +   L+YA++++    E +   PA +              
Sbjct: 238 LSIVIWTTTPWTLPANRAVCLRDDLEYALIQV----EANGEQPAQR-------------- 279

Query: 397 FIIVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESG 455
            IIVAS+L      + G +       A G+DLE  ++ HP  +   P ++ GD++TTESG
Sbjct: 280 -IIVASELAKDAMDRAGIEHFHNLGFAKGADLELLQFNHPFYDFTVPAIL-GDHVTTESG 337

Query: 456 TGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLD 515
           TG+VHTAPGHGQED+V   KYGL + +PV   G +  +   F+G  V    N +V++ L 
Sbjct: 338 TGVVHTAPGHGQEDFVVGQKYGLEVANPVGSNGVYLPDTPLFAGQHVF-KANDSVLEVLK 396

Query: 516 EQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           E+ +L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+++I  V+W+P
Sbjct: 397 EKGALLHHHAYEHSYPHCWRHKTPIIFRATPQWFISMDQAGLRAKALESIKGVQWMP 453



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 118/205 (57%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 605 VDGHGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 662

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL+ +    + +  +++  +D++A+ +     + I ++YE Y    + Q
Sbjct: 663 RIRNTARFFLANLNGFNPETDLVPAEEMVALDRWAVGRALAAQEEIVKAYEEYNTHGVTQ 722

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 723 RLMQFCSIEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALYYIVEALVRWMAPIMSFTADE 782

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 783 IWNEMP-------GQRDKFVFTGEW 800


>gi|401680775|ref|ZP_10812685.1| isoleucine--tRNA ligase [Veillonella sp. ACP1]
 gi|400218114|gb|EJO48999.1| isoleucine--tRNA ligase [Veillonella sp. ACP1]
          Length = 944

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 198/484 (40%), Positives = 285/484 (58%), Gaps = 50/484 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFL-RVADKNDGENFVLHDGPPYANGN 164
           Y  T+ LP+T F MR N   REPEI K W+D++++  R+  + D + F+LHDGPPYANG 
Sbjct: 3   YGKTLHLPETEFPMRGNLPKREPEILKFWEDNKIYQKRLELRKDAKPFILHDGPPYANGK 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHALNK LKDII +YK +  +  RY+PGWD HGLPIE  V+++   + + ++ P  L
Sbjct: 63  LHIGHALNKTLKDIIMKYKTMTGHYTRYIPGWDTHGLPIEHAVIKNTGLN-RHEMAPLDL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R+GV  +W  PYLTL PE+E  Q+ +FG+M+ +G+IY+G 
Sbjct: 122 RNKCKEYALECVENQKQDFIRFGVLGEWERPYLTLRPEFEVKQLGIFGEMAKRGHIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV-WT 343
           K V+W     TALAEAE+EY E   S SIY  F  VS    T  L     P    +V WT
Sbjct: 182 KTVYWCTHCETALAEAEIEYAEKK-SFSIYVKFPYVSEKKVT--LPAGVDPKQAYSVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A++VN +L+Y  V++     GD                     + ++A++
Sbjct: 239 TTPWTMPANVAISVNPELEYGWVKV-----GDE--------------------YYLMATE 273

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV       G +   I    +G+DLE   + HP   R    V+ GD++T E+GTG VHTA
Sbjct: 274 LVDAAMKDIGIEDYEIVNRFSGADLELAEFKHPFVERNA-TVLCGDHVTLEAGTGCVHTA 332

Query: 463 PGHGQEDYVTSLKYG------LPILSPVDDEGKFTEEAGK---------FSGLDVLGDGN 507
           P HG++D+   ++Y       LPI+S V++ G +T++             +G+++  D  
Sbjct: 333 PAHGEDDFNIVMRYNKEGKTELPIVSLVNETGHYTKQVDDNRYGDTEFPLAGVEI-HDAE 391

Query: 508 VAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQV 566
           V V+K L    +L+ +    H+Y + WR K P I+RATEQWF+SV+G+RQ A+DAI  QV
Sbjct: 392 VPVIKILAHNNALLHKSSLRHQYAHCWRCKNPVIYRATEQWFSSVDGYRQQALDAIDNQV 451

Query: 567 KWVP 570
           +W+P
Sbjct: 452 QWIP 455



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 113/180 (62%), Gaps = 6/180 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGADV+RLWVSS DY  DV +   +++Q+S++YRK+R T R+LLGNL D+    + ++Y 
Sbjct: 634 YGADVMRLWVSSADYQADVRLSKDIVKQLSEVYRKIRNTFRFLLGNLDDFNPNTDKVAYA 693

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+   D++AL +LE + + + E+YE+Y+F  ++  I  F  VDLS+ Y DV KD +Y   
Sbjct: 694 DMSEFDKWALLRLEEVRQKVTEAYENYEFHMLYHAIHNFCTVDLSSIYLDVMKDTMYAES 753

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             +  RRS QT +   L ++V +++P+L   AE+VW+ +P     EDG   E V    WP
Sbjct: 754 KNNVARRSAQTAMYEILKTLVAMVSPVLSFTAEEVWKYMP----KEDG-MPESVMLQDWP 808


>gi|395239330|ref|ZP_10417210.1| Isoleucyl-tRNA synthetase [Lactobacillus gigeriorum CRBIP 24.85]
 gi|394476425|emb|CCI87187.1| Isoleucyl-tRNA synthetase [Lactobacillus gigeriorum CRBIP 24.85]
          Length = 930

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 195/472 (41%), Positives = 283/472 (59%), Gaps = 44/472 (9%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
           + K T++L KT F MR N  VRE E  K W+D++++ +    N G   F LHDGPP+ANG
Sbjct: 2   KIKETLNLGKTKFKMRGNLPVREAEWEKEWEDNKLYEQRLKLNQGNPRFDLHDGPPFANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVL-QSLDEDAKKDLTPS 222
           N+HMGH+LNKI KDII RYK ++ +   +VPGWD HGLPIE ++  Q +D   +K +  +
Sbjct: 62  NIHMGHSLNKISKDIIVRYKNMRGFYAPFVPGWDTHGLPIEQQLAKQGVD---RKTMDRA 118

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           K R    +FA   ++ Q   FKR G+ ADW++PY+TL PE+EA +I VFG+M  +GYIY+
Sbjct: 119 KYRELCRQFAMEQIEKQRTDFKRLGILADWDHPYITLQPEFEAEEIRVFGKMFEKGYIYK 178

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           GKKPV+WS SS + LAEAE+EY +   S +IY  F +        G+L+    +    +W
Sbjct: 179 GKKPVYWSWSSESTLAEAEVEYHDVK-SPNIYVAFPVKDG----KGILD--TENTYFIIW 231

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PAN  ++VN +  Y+VV++     GD                   K +++  S
Sbjct: 232 TTTPWTIPANLGISVNPQFDYSVVQV-----GD-------------------KKYVVGTS 267

Query: 403 DLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
            L    E        + + L GS+++     HP+ + Q  +V+ G ++T + GTGLVHTA
Sbjct: 268 RLEAVAETLGWENYEVVQHLKGSEMDRMVAKHPLYD-QDSLVMTGMHVTADDGTGLVHTA 326

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLG----DGNVAVVKYLDEQM 518
           PG G++D+    +YGLP+ SP+D++G FT+E       D++G    D N  VV+ L+   
Sbjct: 327 PGFGEDDFNVGQRYGLPVFSPIDNKGCFTDEV---PDPDLVGMFYDDANKVVVEKLEAVG 383

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +L+    + H YP+DWRTKKP IFRAT QWFAS+  FR   +D I +  ++P
Sbjct: 384 ALLKLSFFTHSYPHDWRTKKPVIFRATTQWFASISKFRNEILDEINKASFMP 435



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 96/155 (61%), Gaps = 1/155 (0%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GA+++RLWV+  D T DV +   +L Q ++ YRK+R T RY+L N  D+    + + YDD
Sbjct: 615 GAEIIRLWVAQADTTSDVAVSYDILNQAAESYRKIRNTFRYMLANTSDFDPETDRVVYDD 674

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           L  +DQY   +L ++VK+  ++Y+ + F  +F+ + +FI  DLS FY D AKD LY    
Sbjct: 675 LRSVDQYLEVKLNDLVKSCLDAYDRFDFTTVFKQVFKFISNDLSAFYLDFAKDVLYIEAQ 734

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVW 731
            S  RRS QTV+    + + +V+ PILPH  E++W
Sbjct: 735 NSKERRSMQTVIYDAAVKLAKVLTPILPHTMEEIW 769


>gi|218282319|ref|ZP_03488609.1| hypothetical protein EUBIFOR_01191 [Eubacterium biforme DSM 3989]
 gi|218216692|gb|EEC90230.1| hypothetical protein EUBIFOR_01191 [Eubacterium biforme DSM 3989]
          Length = 908

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 189/467 (40%), Positives = 273/467 (58%), Gaps = 37/467 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YK T+ +PKT F MR N   +EP   K W D +++ ++ ++ +G E+FVLHDGPPYANG+
Sbjct: 3   YKETLHMPKTAFEMRGNLTKKEPGFQKRWQDEKLYEKMLERREGAESFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK+LKD+I +   ++ YK  Y+PGWD HGLPIE  V + L  D KK +  ++ 
Sbjct: 63  IHLGHALNKVLKDVIVKSHFMEGYKTPYIPGWDTHGLPIETAVTK-LGYDRKK-MGIAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A   V  Q A F   G   D+++PY+TL   +E  QIE+FG+M+++G IY+G 
Sbjct: 121 RKICYDYALKQVANQKAGFLSLGSIGDYDHPYITLQKGFEKHQIEIFGKMAMKGLIYKGL 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S +IY  F    A     G+L+    D    +WTT
Sbjct: 181 KPVYWSPSSESALAEAEVEYKDVK-SPTIYVKF----AVKDGKGVLD---TDCNFVIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  ++VN    Y++V                         D +K  +I+ S +
Sbjct: 233 TPWTIPANLGISVNPDFDYSLV-------------------------DTEKGKLIMLSSM 267

Query: 405 VPTLEAKWGT-KLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           V  L  K+   K  + KT  G + E     HP+   +  +++ GD++T ++GTG VHTAP
Sbjct: 268 VEELCDKFEVEKRDVLKTFKGKEFEYITCTHPLYPERESLLMCGDHVTADAGTGCVHTAP 327

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           G G +D+   +KYGLP+   VD +G   ++ G++     + D N  V + LDE   L+  
Sbjct: 328 GFGVDDFNIGMKYGLPVYCNVDAQGCMMDDVGEWLAGQYVEDANKTVTQKLDELGVLLKL 387

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           +   H YP+DWRTKKP IFRAT QWFAS++  R   ++ I  V WVP
Sbjct: 388 QFITHSYPHDWRTKKPIIFRATTQWFASIDQIRDELLEQIHSVSWVP 434



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 100/169 (59%), Gaps = 2/169 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-- 627
           P +    YGAD+LRLW  SVDY  DV +G ++L+Q+S+ YRK+R TLR+L+ NL D +  
Sbjct: 605 PSEITKKYGADILRLWACSVDYQADVSMGQKILKQVSENYRKVRNTLRFLMANLDDQKFT 664

Query: 628 VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             + +++++L  +DQY L +L++ V   R++Y  Y+F  +   +   +  +LS +Y D  
Sbjct: 665 AKDCVNFNELSELDQYILTELKDAVDYCRKAYNEYRFSDVVTYLTNLMTNELSAYYLDYT 724

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPF 736
           KD LY     +  RR  QTVL   +  + ++ APIL H  E+V   + F
Sbjct: 725 KDILYIEKEDAPVRRQVQTVLYNAVEVMTKLWAPILAHTCEEVNDYMHF 773


>gi|343511083|ref|ZP_08748268.1| isoleucyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
 gi|342799430|gb|EGU34996.1| isoleucyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
          Length = 946

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 199/477 (41%), Positives = 283/477 (59%), Gaps = 39/477 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP T F MR N   REPE+ + W    ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPDTGFPMRGNLANREPEMLERWYKEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   YVPGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q  SFKR G+  +W+ PY T+D   EA  I   G+++ +G++ +G 
Sbjct: 123 REKCREYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANIIRALGKIADKGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF-LPD------- 336
           KPVHW     +ALAEAE+EY +  VS SI   F    A    + +L +F L D       
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVKF----AATDEAAVLAKFALADGHAGEGE 237

Query: 337 LGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKV 396
           L + +WTTTPWT+PAN AV +   L+YA++++    E +   PA +              
Sbjct: 238 LSIVIWTTTPWTLPANRAVCLRDDLEYALIQV----EANGEQPAQR-------------- 279

Query: 397 FIIVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESG 455
            IIVAS+L      + G +       A G+DLE  ++ HP  +   P ++ GD++TTESG
Sbjct: 280 -IIVASELAKDAIDRAGIEHFHNLGFAKGADLELLQFNHPFYDFTVPAIL-GDHVTTESG 337

Query: 456 TGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLD 515
           TG+VHTAPGHGQED+V   KYGL + +PV   G +  +   F+G  V    N +V++ L 
Sbjct: 338 TGVVHTAPGHGQEDFVVGQKYGLEVANPVGSNGVYLPDTPLFAGQHVF-KANDSVLEVLK 396

Query: 516 EQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           E+ +L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+++I  V+W+P
Sbjct: 397 EKGALLHHHAYEHSYPHCWRHKTPIIFRATPQWFISMDQAGLRAKALESIKGVQWMP 453



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 118/205 (57%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 605 VDGHGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 662

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL+ +    + +  +++  +D++A+ +     + I ++YE Y    + Q
Sbjct: 663 RIRNTARFFLANLNGFNPETDLVPAEEMVALDRWAVGRALAAQEEIVKAYEEYNTHGVTQ 722

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 723 RLMQFCSIEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALYYIVEALVRWMAPIMSFTADE 782

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 783 IWNEMP-------GQRDKFVFTGEW 800


>gi|310790083|gb|EFQ25616.1| isoleucyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 947

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 205/474 (43%), Positives = 280/474 (59%), Gaps = 45/474 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           +  T+ LPK+TF  R  +  R   + +  DD   F +    N+    F LHDGPPYANG 
Sbjct: 5   WASTLRLPKSTFPPRPLSQFRADYLRRSADD---FYQWQLSNESRPAFSLHDGPPYANGG 61

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHALNKILKD+INR K+ Q Y+VRY PGWDCHGLPIE+K + +      K LT +++
Sbjct: 62  LHVGHALNKILKDMINRVKVQQGYRVRYRPGWDCHGLPIEMKAVGA---SGGKGLTATEI 118

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R  A + A ATV  QM  F+ YGV  DW+  + T+DP++E  Q+ +F QM  +G IYR  
Sbjct: 119 RKAARQLASATVLEQMDGFRSYGVMGDWDARWTTMDPDFEIRQLRLFQQMVRRGLIYRKS 178

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSSRTALAEAELEY E HVS + Y  +  ++  PS SG+  +    L   +WTT
Sbjct: 179 KPVYWSPSSRTALAEAELEYNENHVSTAAYVRYP-ITGGPSLSGVSGQ----LYAIIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN A+AV+  L YAVV  +       A+     SR    L+  K +F       
Sbjct: 234 TPWTLPANKAIAVHEDLDYAVVSAK------GASYLTAVSR----LEAVKALF------- 276

Query: 405 VPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCP--VVIGGDYITTESGTGLVHTA 462
            P  E +     V+  ++ GS+L+  +Y + +   Q     VI  D+++ +SGTGLVH A
Sbjct: 277 -PEEEPQ-----VVVSSIKGSELKGLKYHNRLQGVQSAPQPVIHADFVSADSGTGLVHIA 330

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA------GKFSGLDVLGDGNVAVVKYLDE 516
           PGHG EDY    + G+   +P+DDEG FT EA             +L  G+ AV+  +  
Sbjct: 331 PGHGFEDYEACAQLGIDAFAPIDDEGNFTREAFPDAPEKLTEASSILKGGSKAVLALI-- 388

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           Q  ++    Y+HKYPYDWRTK+P + R+T QWFA V+  +  A+DA+  VK+VP
Sbjct: 389 QDDVLSAAKYKHKYPYDWRTKQPVVMRSTAQWFADVDSIKDDAVDALKDVKFVP 442



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 13/158 (8%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
           G D LRLWV+S +YT DV +G  VL+ +  I  K R  ++ L G++H+     S      
Sbjct: 645 GPDALRLWVASSEYTKDVAVGQAVLKSVHTILVKYRTIIKMLTGSMHE-----SARTAPT 699

Query: 638 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
             +D  AL QL+++ + + +++ +++F+K F  + R++  DLS FY +  KDRLY G   
Sbjct: 700 TALDHIALMQLKDVTEEVHQAFAAHEFYKAFNALNRWVANDLSAFYLEAMKDRLYCGDGG 759

Query: 698 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
                    VL    L  +R+++P+ P L E+ W + P
Sbjct: 760 G--------VLEPIFLGFLRMLSPMTPLLVEEAWDHRP 789


>gi|392572262|gb|EIW65419.1| hypothetical protein TREMEDRAFT_46186 [Tremella mesenterica DSM
           1558]
          Length = 877

 Score =  354 bits (909), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 194/501 (38%), Positives = 290/501 (57%), Gaps = 56/501 (11%)

Query: 101 KEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPY 160
           +++  Y HT+ LPKT+  ++    V+    ++      ++ +   +   + FVLHDGPPY
Sbjct: 35  QDKKAYSHTLLLPKTSMPLKVKDPVQHERRYRQRTSQDLYRKQRSRKTAKEFVLHDGPPY 94

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLD-EDAKKDL 219
           ANGNLHMGHALNK+LKD++NR+K+++ Y+V YVPGWDCHGLPIE+K L+ +  + A  DL
Sbjct: 95  ANGNLHMGHALNKVLKDMVNRWKVMRGYRVHYVPGWDCHGLPIEMKALERIGRQAANPDL 154

Query: 220 TPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNP---YLTLDPEYEAAQIEVFGQMSL 276
            P+++R++A K A   ++ Q    +  GV ADW++P   Y TLD ++E  Q+ +F +M  
Sbjct: 155 GPNRIRSEARKTALKAIEIQKREQQELGVMADWDSPDGVYRTLDHDFEVRQLRLFQRMVS 214

Query: 277 QGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD 336
           +GYI    +P ++SPS+RTALAEAEL+Y +GH SRS+Y  F +  +    S  L +   D
Sbjct: 215 KGYIAHRLRPTYYSPSTRTALAEAELKYKDGHKSRSVYVAFPVEKS--DMSPALTKAYED 272

Query: 337 ---------LGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPG 387
                    L LA+WTTT W++P N  VAVN  ++Y++V        D+A          
Sbjct: 273 AQKQKGPVSLSLAIWTTTAWSLPGNMGVAVNQDMEYSIV------RSDTAG--------- 317

Query: 388 NVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQC----PV 443
                     ++VA++ +  L+   G  L    +L+G+DL   RY H   ++      P 
Sbjct: 318 ---------LLVVATERLLALQNILG-PLESLHSLSGADLVGTRYTHLFHSKTSSLPRPT 367

Query: 444 VIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG-LP--ILSPVDDEGKFT--------- 491
           V   +++   SGTGLVH+AP HG EDY      G LP  +  P+DD+G+FT         
Sbjct: 368 VFASNHVLPTSGTGLVHSAPAHGYEDYQGMTVAGVLPKELRCPIDDDGRFTAAVTRETDK 427

Query: 492 EEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFAS 551
           ++  +  G +VLG G   ++  L  + SL+ EE  EH+YPYDW+T +P I RAT QWFA 
Sbjct: 428 DDVARLIGQEVLGAGIGTMIDLLRSEGSLLAEEVIEHRYPYDWKTNQPIIVRATPQWFAD 487

Query: 552 VEGFRQAAMDAIGQVKWVPPQ 572
           VE  +  A+ A+ +V +VPPQ
Sbjct: 488 VESIKDEAVKALEEVHFVPPQ 508



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 103/185 (55%), Gaps = 12/185 (6%)

Query: 572 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 631
           Q  P  G D LR+W +SV+YT DV IGP  + Q S+  RKLR  LR+LL N      G++
Sbjct: 694 QSLPASGTDALRIWAASVEYTRDVSIGPSSIAQASETLRKLRSALRFLLANTAP---GDA 750

Query: 632 ISYD--DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
            S D  +L  +D Y + +L+ + + + ++Y+SY F K+ Q +  F    LS+ YFD  KD
Sbjct: 751 KSLDQVELSPLDSYVIKELDKVRQTVIDAYDSYAFNKVLQTLTTFTASTLSSLYFDTIKD 810

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 749
            LY       TR++    L   L  ++++IAPI+PHLAE+V+++        + S    V
Sbjct: 811 SLYCNAAADPTRQAVIATLDHVLRQLLKMIAPIVPHLAEEVFEH-------REKSLGLSV 863

Query: 750 FESKW 754
           F+  W
Sbjct: 864 FDDPW 868


>gi|149192164|ref|ZP_01870384.1| isoleucyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148834004|gb|EDL51021.1| isoleucyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 942

 Score =  354 bits (909), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 197/473 (41%), Positives = 280/473 (59%), Gaps = 34/473 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W    ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLANREPEMLKRWYKEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   +A+  V+ Q  SFKR G+  +W+ PY T+D + EA  I   G+++ +G++ +G 
Sbjct: 123 REKCRTYAEGQVEGQKESFKRLGILGEWDKPYRTMDFDTEANIIRALGKIADKGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL-LNEFLP---DLGLA 340
           KPVHW     +ALAEAE+EY +  VS SI   F+        S   LNE      D+ + 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVRFKAADESALISKFSLNEGHEGQGDISII 241

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AV +   L+Y +++     EGD+                     IIV
Sbjct: 242 IWTTTPWTLPANRAVCLRDDLEYVLIQT----EGDNPER------------------IIV 279

Query: 401 ASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           AS+L   +  + G +       A G+DLE  ++ HP  +   P ++ GD++TT+SGTG+V
Sbjct: 280 ASELAKDVMDRAGIEHFHNLGFAKGADLELSQFNHPFYDFTVPAIL-GDHVTTDSGTGVV 338

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHGQED+    KYGL + +PV   G +  +   F+G  V    N AVV+ L E+ +
Sbjct: 339 HTAPGHGQEDFAVGQKYGLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVVEVLKEKGA 397

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+++I  V+W+P
Sbjct: 398 LLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKGVEWMP 450



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 117/205 (57%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 601 VDGHGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 658

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL+ +    + +  D++  +D++A+ +     + I ++Y  Y    + Q
Sbjct: 659 RIRNTARFFLANLNGFNPETDLVPADEMVALDRWAVGRALAAQEEIVKAYGEYNTHAVTQ 718

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 719 RLMQFCSIEMGSFYLDVIKDRQYTAKLGGHAQRSCQTALYYIVEALVRWMAPIMSFTADE 778

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 779 IWNEMP-------GQRDKFVFAGEW 796


>gi|419845141|ref|ZP_14368427.1| isoleucine--tRNA ligase [Haemophilus parainfluenzae HK2019]
 gi|386416472|gb|EIJ30969.1| isoleucine--tRNA ligase [Haemophilus parainfluenzae HK2019]
          Length = 941

 Score =  354 bits (909), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 197/471 (41%), Positives = 279/471 (59%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T F MR +   REP + K W D Q++ ++     G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETGFPMRGDLAKREPVMLKNWYDKQLYQKIRQATKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + +T ++ 
Sbjct: 65  IHIGHAVNKILKDIIVKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKVTAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++   EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFNTEANIIRTLGKVIANGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL--LNEFLPDLGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F  VSA         + +    L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPAVSAVEIEEKFNAVGKGHGKLSAVIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + V I  ++ G  LE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGVEQVEILGSVKGQALELVRFNHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++   KY LP+   V ++GKF      F+G  V  + N  VV+ L E  +L+
Sbjct: 337 APDHGLDDFIVGQKYNLPMAGLVSNDGKFISTTEFFAGKGVF-EANPLVVEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I  V+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKGVRWIP 446



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 125/202 (61%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +    +++  +D+  +D++A+    +  K I+++Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPQRDAVKPEDMISLDRWAVACALDAQKEIKDAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++W  LP   T    + AEFVF
Sbjct: 774 EIWGYLPQTAT----TRAEFVF 791


>gi|193216846|ref|YP_002000088.1| isoleucyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193002169|gb|ACF07384.1| isoleucyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 889

 Score =  354 bits (909), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 192/466 (41%), Positives = 286/466 (61%), Gaps = 43/466 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +P+T F M+AN   +E +  K W++ +++ R+  KN     F+LHDGPPYANGN
Sbjct: 7   YKDTLLMPQTDFSMKANLAEKEKQFIKNWEESKLYQRLLKKNKSNKPFILHDGPPYANGN 66

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKI+KDII R++ +Q +   YV GWD HGLPIE K+L S  + A KD +  +L
Sbjct: 67  IHLGHALNKIIKDIIVRFRTMQGFFSPYVAGWDTHGLPIEHKML-SEAKKAAKDYSIVEL 125

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R  A ++A + ++ Q   FK+  V  D+ + Y+TLD E EA Q+E+F +  L G IY+  
Sbjct: 126 RKAAHQYALSQIELQKEQFKKLAVLTDFQDIYVTLDKELEAKQLELFKKEILSGLIYKDL 185

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP-DLGLAVWT 343
           KPV+WSPSS++ALAEAE+EY + HVS SIY  F + +         N+  P +  L +WT
Sbjct: 186 KPVYWSPSSQSALAEAEVEYSD-HVSPSIYVAFELQN---------NKIFPKNTSLLIWT 235

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+ ANAAVA+N K  Y+++E+              K+R             I+AS+
Sbjct: 236 TTPWTLLANAAVAINEKFNYSLIEV--------------KNRN-----------FIIASE 270

Query: 404 LVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           LV T+  E KW    ++ KT  G +L +  Y+ P++   CPVV+ G ++T ESGTGLVH 
Sbjct: 271 LVETVASEGKWENWKIL-KTFKGKELLSLNYLSPLNKNICPVVL-GHHVTLESGTGLVHI 328

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP  G++D++   K  L  +  V+D+G   +   +++G+    D N  + +YL+   +LI
Sbjct: 329 APLFGEDDFIIGQKNALNSIMHVEDDGTLNKHGLQWAGI-FYDDANPKIGQYLEANGNLI 387

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVK 567
           + +  +H+YP+DWRT KP I+RAT QWF S++  +    DA+ +VK
Sbjct: 388 IFKKIKHQYPHDWRTHKPIIYRATPQWFVSLKSIKSNLTDALKEVK 433



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 119/233 (51%), Gaps = 11/233 (4%)

Query: 534 WRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYT 592
           WR K P  F+A       ++G       + G V  + P +    YGAD+LRLWV++ +YT
Sbjct: 568 WRNKAP--FKALLSHGFLLDGKGNKMSKSKGNV--IDPLDITNKYGADILRLWVANSEYT 623

Query: 593 GDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIV 652
            D+ I  ++L+Q  +IYRK R T++++LG++ D+      S   L  I +    +L+N+ 
Sbjct: 624 NDISIDDKILQQNIEIYRKFRNTMKFILGSISDY----DWSEVKLSSIHELMFNRLQNLT 679

Query: 653 KNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHL 712
             I E+YE Y+F  + ++I  F+I +LS++Y  + KD LY        RR  Q VL++  
Sbjct: 680 NKIIEAYEDYRFVAVIKLINNFVI-NLSSYYLSIVKDILYLNKQNDSERRQVQFVLASIA 738

Query: 713 LSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEF-VFESKWPVLDEKWRTF 764
             +    API+P   E+++  L     L      EF    +    L+EKW  F
Sbjct: 739 KVLTIAFAPIMPSTCEEIYSYLNIPNKLSSIHEEEFPKLSTPNEKLEEKWEEF 791


>gi|282849351|ref|ZP_06258736.1| isoleucine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282581055|gb|EFB86453.1| isoleucine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 944

 Score =  354 bits (909), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 198/484 (40%), Positives = 285/484 (58%), Gaps = 50/484 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFL-RVADKNDGENFVLHDGPPYANGN 164
           Y  T+ LP+T F MR N   REPEI K W+D++++  R+  + D + F+LHDGPPYANG 
Sbjct: 3   YGKTLHLPETEFPMRGNLPKREPEILKFWEDNKIYQKRLELRKDAKPFILHDGPPYANGK 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LH+GHALNK LKDII +YK +  +  RY+PGWD HGLPIE  V+++   + + ++ P  L
Sbjct: 63  LHIGHALNKTLKDIIMKYKTMTGHYTRYIPGWDTHGLPIEHAVIKNTGLN-RHEMAPLDL 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R+GV  +W+ PYLTL PE+E  Q+ +FG+M+ +G+IY+G 
Sbjct: 122 RNKCKEYALECVETQKQDFIRFGVLGEWDRPYLTLRPEFEVKQLGIFGEMAKRGHIYKGL 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV-WT 343
           K V+W     TALAEAE+EY E   S SIY  F  VS    T  L     P    +V WT
Sbjct: 182 KTVYWCTHCETALAEAEIEYAEKK-SFSIYVKFPYVSEKKVT--LPAGVDPKQAYSVIWT 238

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A++VN +L+Y  V+      GD                     + ++A++
Sbjct: 239 TTPWTMPANVAISVNPELEYGWVKA-----GDE--------------------YYLMATE 273

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV       G +   I    +G+DLE   + HP   R    V+ GD++T E+GTG VHTA
Sbjct: 274 LVDAAMKDIGIEDYEIVNRFSGADLELAEFKHPFVERT-STVLCGDHVTLEAGTGCVHTA 332

Query: 463 PGHGQEDYVTSLKYG------LPILSPVDDEGKFTEEAGK---------FSGLDVLGDGN 507
           P HG++D+   ++Y       LPI+S V++ G +T++             +G+++  D  
Sbjct: 333 PAHGEDDFNIVMRYNKEGKTELPIVSLVNETGNYTKQVDDNRYGDTEFPLAGVEI-HDAE 391

Query: 508 VAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAI-GQV 566
           V V+K L    +L+ +    H+Y + WR K P I+RATEQWF+SV+G+RQ A+DAI  QV
Sbjct: 392 VPVIKILAHNNALLHKSSLRHQYAHCWRCKNPVIYRATEQWFSSVDGYRQQALDAIDNQV 451

Query: 567 KWVP 570
           +W+P
Sbjct: 452 QWIP 455



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 112/180 (62%), Gaps = 6/180 (3%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGADV+RLWVSS DY  DV +   +++Q+S++YRK+R T R+LLGNL D+    + ++Y 
Sbjct: 634 YGADVMRLWVSSADYQADVRLSKDIVKQLSEVYRKIRNTFRFLLGNLDDFNPNTDKVAYA 693

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+   D++AL +LE + + + ++YE+Y+F  ++  I  F  VDLS+ Y DV KD +Y   
Sbjct: 694 DMSEFDKWALLRLEEVRQKVTDAYENYEFHMLYHAIHNFCTVDLSSIYLDVMKDTMYAES 753

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             +  RRS QT +   L ++V +++P+L   AE+VW+ +P     ++    E V    WP
Sbjct: 754 KDNVARRSAQTAMYEILKTLVAMVSPVLSFTAEEVWKYMP-----KEEGMRESVMLQDWP 808


>gi|386266300|ref|YP_005829792.1| isoleucyl-tRNA synthetase [Haemophilus influenzae R2846]
 gi|309973536|gb|ADO96737.1| Isoleucyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 941

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 193/471 (40%), Positives = 285/471 (60%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T+F MR +   REP++ K W +  ++ ++   + G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETSFPMRGDLAKREPDMLKNWYEKNLYQKIRKASKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + ++ ++ 
Sbjct: 65  IHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKISAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYASEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIENGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD--LGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F + SA    +    +      L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPVESADEIEAKFSAQGRGQGKLSAIIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + V I  ++ G+DLE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGVEQVKILGSVKGADLELSRFHHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++   +Y LP+   V ++GKF      F+G  V  + N  V++ L E  +L+
Sbjct: 337 APDHGLDDFIVGKQYDLPMAGLVSNDGKFISTTEFFAGKGVF-EANPLVIEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 124/202 (61%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +      +  +++  +D++A+    +    I+++Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQNEIKDAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++WQ+LP      + + AEFVF
Sbjct: 774 EIWQHLPQT----ESARAEFVF 791


>gi|219871117|ref|YP_002475492.1| isoleucyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254782407|sp|B8F5E2.1|SYI_HAEPS RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|219691321|gb|ACL32544.1| isoleucyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 938

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 192/472 (40%), Positives = 283/472 (59%), Gaps = 37/472 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T F MR +   REP + + W D +++ ++ + + G+ +F+LHDGPPYANGN
Sbjct: 4   YKNTLNLPETGFPMRGDLAKREPAMLQNWHDKKLYQKIREASKGKRSFILHDGPPYANGN 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+N ILKDIIN+ K    +   YVPGWDCHGLPIELKV + L     ++++ S+ 
Sbjct: 64  IHLGHAVNHILKDIINKSKTAMGFDTPYVPGWDCHGLPIELKV-EGLVGKPNENISASEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++AK  V  Q A F R G+  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 123 RQKCREYAKEQVDGQKADFMRLGILGDWDNPYLTMNFDTEAHIIRTLGKVIANGHLYKGS 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLN---EFLPDLGLAV 341
           KPVHW     ++LAEAE+EY E  VS SIY  F  V  P +     N   +    +   +
Sbjct: 183 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFSAVD-PVAVEAKFNAQGKGSGQISAVI 240

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P+N A+A+N++L+Y +V+      GD                      +I+A
Sbjct: 241 WTTTPWTLPSNRAIALNSELEYQLVQF-----GDER--------------------VILA 275

Query: 402 SDLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           ++LV  ++   G + V +  +  GSDLE  R+ HP  +   P ++ GD++TT+ GTGLVH
Sbjct: 276 TELVEAVQKVTGVEQVEVLGSAKGSDLELMRFNHPFYDFSVPFIL-GDHVTTDGGTGLVH 334

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAP HG +DY+   KY L +   V ++GKF      F+G  V  + N  V++ L E  +L
Sbjct: 335 TAPDHGLDDYIVGQKYKLEMAGLVANDGKFISTTPFFAGKGVF-ETNDLVLEKLKETGAL 393

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           +  E  +H YP+ WR K P IFRAT QWF  +E  G R+ A+  I +V+W+P
Sbjct: 394 LKLERIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRKQALGEIKRVRWIP 445



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 108/183 (59%), Gaps = 6/183 (3%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP +     GAD+LRLWV+S DYTG++ +   +L    D YR++R T R+LL NL+ +  
Sbjct: 613 VPSEVWNKNGADILRLWVASTDYTGEIAVSHNILNSAGDTYRRIRNTARFLLANLNGFDP 672

Query: 629 GNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
               +  +++  +D++A+    +   +I+E+Y++YQF  + Q + RF  +++ +FY D+ 
Sbjct: 673 KRDLVKPEEMIALDRWAVSCALDAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDII 732

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAE 747
           KDR YT    S  RRSCQT L     ++VR IAPIL   A+++W  LP     +    +E
Sbjct: 733 KDRQYTTKADSLARRSCQTALWHISEALVRWIAPILSFTADEIWGYLP-----QVEGRSE 787

Query: 748 FVF 750
           FVF
Sbjct: 788 FVF 790


>gi|260654931|ref|ZP_05860419.1| isoleucine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630246|gb|EEX48440.1| isoleucine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 918

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 190/469 (40%), Positives = 272/469 (57%), Gaps = 37/469 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T+ LP+T F MRA    +EP+I + W    V+ ++  KN +G  F  HDGPPYANG 
Sbjct: 5   YKSTLHLPQTDFPMRAGLAQKEPQILEFWKRKGVYDKLQKKNFNGPKFSFHDGPPYANGE 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQ--SLDEDAKKDLTPS 222
           +H+GHALNK LKD + +Y+ +  Y   YVPGWD HGLPIELKVL+   LD+D+   ++P 
Sbjct: 65  MHLGHALNKSLKDFVVKYRSMNGYACPYVPGWDTHGLPIELKVLKDGGLDKDS---ISPV 121

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           +LR K A+ A+  +  Q     R G +ADW +PY+TL PEYEAA+++    M  +GY+YR
Sbjct: 122 ELRQKCAETARYWIGRQKEGMIRLGCFADWEHPYMTLQPEYEAAELDALAGMVEKGYVYR 181

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G+KPV+W    +TALA AE+EY +   S SI+  + M         L  E    + + VW
Sbjct: 182 GQKPVYWCIDCQTALAAAEIEYGD-ETSPSIFVAYSMEDLSSKFPELAGE---PVSVVVW 237

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PA+ AVAV  +  Y    ++                        K+++++   
Sbjct: 238 TTTPWTLPASMAVAVGLQYDYGFYRVE------------------------KRLYLLACG 273

Query: 403 DLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
            +    +A   T      T+ G  LE C   HP  +R+ P+V+  DY+T ++GTG VHTA
Sbjct: 274 MVDSVAQATGLTFGEPVLTVKGQALEGCVAFHPFLDRKTPIVLA-DYVTLDAGTGCVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG EDY T  +YG+ I +PVD  G+FT +     G+D+   G   V++ L +   L+ 
Sbjct: 333 PGHGVEDYETGCRYGIEIYNPVDGRGRFTPDTPLVGGMDI-EKGAQTVMQTLRDSGRLLG 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQ-VKWVP 570
            +   H YP+ WR  KP +FR+T+QWF +VE FR+ A+ AI + VKW+P
Sbjct: 392 VKKIVHSYPHCWRCHKPVVFRSTDQWFINVEAFREEALKAIDEDVKWMP 440



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 5/184 (2%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLWV+S DY  D+ I  +++  + + YR++R T RYLLGNLH +    + + Y+
Sbjct: 620 YGADILRLWVASTDYRSDMRISYKIVDSLVESYRRIRNTARYLLGNLHGFNPSTDRVPYE 679

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
            +   D++ L  L   ++ + ESYE+Y+F      I +  + +LS+ Y DV KDRLY   
Sbjct: 680 KMGEFDRWVLALLNRTIRRVTESYENYEFHIPTMTIHQLCVNELSSVYLDVNKDRLYADP 739

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
                RR+ QTV+   L ++ R++AP+L   +E++WQ    A    D S  E VF ++WP
Sbjct: 740 ENDTARRATQTVMWELLTTLTRMLAPVLSFTSEEIWQ----AAKEIDPSLEESVFLAEWP 795

Query: 756 VLDE 759
             +E
Sbjct: 796 KPNE 799


>gi|375130087|ref|YP_004992186.1| isoleucyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
 gi|315179260|gb|ADT86174.1| isoleucyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 948

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 277/473 (58%), Gaps = 34/473 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR +   REPE+ K W    ++  + +   G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGDLAKREPEMLKRWYKEDLYGAIREAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDSPYIPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   FKR G+  +W+ PY T+D   EA  I   G+++  G++ +G 
Sbjct: 123 REKCREYAAGQVEGQKEGFKRLGILGEWDKPYRTMDFATEANIIRALGKIADNGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLL----NEFLPDLGLA 340
           KPVHW     +ALAEAE+EY +  VS SI   F+        S       +E   D+ + 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVRFKTADEAALLSKFTLTEGHEGHGDVSIV 241

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AV +   L+Y +++I+                       ++   IIV
Sbjct: 242 IWTTTPWTLPANRAVCLRDDLEYVLIQIEG----------------------EQPERIIV 279

Query: 401 ASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           AS+L  ++  + G +       A G+DLE  ++ HP  N   P ++ GD++TT+SGTG+V
Sbjct: 280 ASELAKSVMDRAGIEHFHFLGFAKGADLELSQFNHPFYNFTVPAIL-GDHVTTDSGTGVV 338

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHGQED+    KYGL + +PV   G +  +   F+G  V    N AV++ L E  +
Sbjct: 339 HTAPGHGQEDFAVGQKYGLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVIEVLKEHGA 397

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           L+    YEH YP+ WR K P IFRAT QWF S++  G R+ A+ AI  VKW+P
Sbjct: 398 LLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLREKALGAIKGVKWMP 450



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 119/206 (57%), Gaps = 7/206 (3%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 601 VDGQGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADSYR 658

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL+ +    + I+ D++  +D++A+ +     + I ++Y  Y    + Q
Sbjct: 659 RIRNTARFFLANLNGFNPATDIIAADEMVALDRWAVARAMAAQQEIVKAYAEYNTHAVVQ 718

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  V++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 719 RLMHFCSVEMGSFYLDVIKDRQYTAKLGGNAQRSCQTALYYIVEALVRWMAPIMSFTADE 778

Query: 730 VWQNLPFAYTLEDGSA-AEFVFESKW 754
           +W  +P      +G A  +FVF  +W
Sbjct: 779 IWNAMP--TNQANGEARGKFVFADEW 802


>gi|350530286|ref|ZP_08909227.1| isoleucyl-tRNA synthetase [Vibrio rotiferianus DAT722]
          Length = 942

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 197/475 (41%), Positives = 282/475 (59%), Gaps = 38/475 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ + W    ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLANREPEMLERWYKEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q  SFKR G+  +W+ PY T+D   EA  I   G+++ +G++ +G 
Sbjct: 123 REKCREYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANIIRALGKIASKGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFR------MVSAPPSTSGLLNEFLPDLG 338
           KPVHW     +ALAEAE+EY +  VS SI   F+      ++S    T G  +E   D+ 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVRFKAADEAALLSKFELTEG--HEGQGDVS 239

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           + +WTTTPWT+PAN AV +   L+Y +++     EGD+A                    I
Sbjct: 240 IVIWTTTPWTLPANRAVCLRDDLEYVLIQT----EGDNAER------------------I 277

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           IVAS+L   +  + G +       A GSDLE  ++ HP  +   P ++ GD++TT+SGTG
Sbjct: 278 IVASELAKDVMDRAGIEHFHNLGFAKGSDLELSQFQHPFYDFTVPAIL-GDHVTTDSGTG 336

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
           +VHTAPGHGQED+    KY L + +PV   G +  +   F+G  V    N AVV+ L E+
Sbjct: 337 VVHTAPGHGQEDFAVGNKYNLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVVEVLKEK 395

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            +L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+++I  V+W+P
Sbjct: 396 GALLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKSVEWMP 450



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 116/205 (56%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 601 VDGHGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 658

Query: 611 KLRGTLRYLLGNLHDWRVGNSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL  +     I   +++  +D++A+ +     + I ++Y+ Y    + Q
Sbjct: 659 RIRNTARFFLANLSGFNPATDIVPAEEMVALDRWAVGRALAAQEEIIKAYDEYNIHAVTQ 718

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 719 RLMQFCSIEMGSFYLDVIKDRQYTAKQGGHAQRSCQTALYYIVEALVRWMAPIMSFTADE 778

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 779 IWNEMP-------GERDKFVFTGEW 796


>gi|260771134|ref|ZP_05880061.1| isoleucyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260613731|gb|EEX38923.1| isoleucyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 948

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 277/473 (58%), Gaps = 34/473 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR +   REPE+ K W    ++  + +   G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGDLAKREPEMLKRWYKEDLYGAIREAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDSPYIPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   FKR G+  +W+ PY T+D   EA  I   G+++  G++ +G 
Sbjct: 123 REKCREYAAGQVEGQKEGFKRLGILGEWDKPYRTMDFATEANIIRALGKIADNGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLL----NEFLPDLGLA 340
           KPVHW     +ALAEAE+EY +  VS SI   F+        S       +E   D+ + 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVRFKTADEAALLSKFTLTEGHEGHGDVSIV 241

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AV +   L+Y +++I+                       ++   IIV
Sbjct: 242 IWTTTPWTLPANRAVCLRDDLEYVLIQIEG----------------------EQPERIIV 279

Query: 401 ASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           AS+L  ++  + G +       A G+DLE  ++ HP  N   P ++ GD++TT+SGTG+V
Sbjct: 280 ASELAKSVMDRAGIEHFHFLGFAKGADLELSQFNHPFYNFTVPAIL-GDHVTTDSGTGVV 338

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHGQED+    KYGL + +PV   G +  +   F+G  V    N AV++ L E  +
Sbjct: 339 HTAPGHGQEDFAVGQKYGLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVIEVLKEHGA 397

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           L+    YEH YP+ WR K P IFRAT QWF S++  G R+ A+ AI  VKW+P
Sbjct: 398 LLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLREKALGAIKGVKWMP 450



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 119/206 (57%), Gaps = 7/206 (3%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 601 VDGQGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADSYR 658

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL+ +    + I+ D++  +D++A+ +     + I ++Y  Y    + Q
Sbjct: 659 RIRNTARFFLANLNGFNPATDIIAADEMVALDRWAVARAMAAQQEIVKAYAEYNTHAVVQ 718

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  V++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 719 RLMHFCSVEMGSFYLDVIKDRQYTAKLGGNAQRSCQTALYYIVEALVRWMAPIMSFTADE 778

Query: 730 VWQNLPFAYTLEDGSA-AEFVFESKW 754
           +W  +P      +G A  +FVF  +W
Sbjct: 779 IWNAMP--TNQANGEARGKFVFADEW 802


>gi|222053500|ref|YP_002535862.1| isoleucyl-tRNA synthetase [Geobacter daltonii FRC-32]
 gi|221562789|gb|ACM18761.1| isoleucyl-tRNA synthetase [Geobacter daltonii FRC-32]
          Length = 924

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 199/535 (37%), Positives = 291/535 (54%), Gaps = 57/535 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP T F M+AN   REPE+ + W+ ++++ ++ D   G+  ++LHDGPPYANG+
Sbjct: 3   YKDTLNLPVTDFPMKANLAQREPEMLETWEKNRLYKKMEDTGKGKPKYILHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDI+ + K +  +   Y+PGWDCHGLPIEL+V ++L    K ++T  ++
Sbjct: 63  IHIGHALNKILKDIVLKSKRMSGFDAPYIPGWDCHGLPIELQVEKNLG-SKKHEITKLEM 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  ++AK  V  Q   F+R GV  +W+NPYLT++  YE        + +  G +Y+GK
Sbjct: 122 RKQCREYAKKFVDIQKQEFERLGVLGEWDNPYLTMNYSYEGITAHELARFAENGGLYKGK 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRM----VSAPPSTSGLLNEFLPDLGLA 340
           KPVHW  S  TALAEAE+EY + H S S++  F++        P+ SG        +   
Sbjct: 182 KPVHWCSSCGTALAEAEVEYAD-HKSPSVFVKFQLKDDISKELPALSG------KKVSPV 234

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN A+A++ +  Y  V                         D     +IV
Sbjct: 235 IWTTTPWTIPANLAIAMHPEFDYVAV-------------------------DTGAEVLIV 269

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A  L        G   V+  T   + LE     HP  +R   +++ GD++T E+GTG VH
Sbjct: 270 AEGLKEAFFKATGVNGVVIATFKAAALEKKLCRHPFYDRD-SIILLGDHVTLEAGTGCVH 328

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHGQEDY   LK+GL I +PVD+ G+F E    F G  V  D N  V+  L+E  +L
Sbjct: 329 TAPGHGQEDYELGLKFGLDIYNPVDNRGRFLETIPFFGGQYVF-DANPNVIAKLEEVGAL 387

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVPP------- 571
           + +    H YP+ WR KKP IFRATEQWF S+E    R+ A+  I  V W+P        
Sbjct: 388 VGKGEISHSYPHCWRCKKPIIFRATEQWFISMESNDLRRKALTEINTVSWIPKWGKERIF 447

Query: 572 ---QEAPGYGADVLRLW-----VSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRY 618
              +  P +     R W     V      G+ +   +++  ++D++ K    + Y
Sbjct: 448 GMIENRPDWCVSRQRNWGVPITVFYCKACGEALADGKIMHHVADLFEKESSDIWY 502



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 82/234 (35%), Positives = 139/234 (59%), Gaps = 13/234 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    ++G V  V P++    YGA+VLRLWV++ DY  D+ I  ++L ++S+ YR
Sbjct: 595 VDGSGRKMSKSVGNV--VAPEDVIKKYGAEVLRLWVAAQDYRDDLRISQEILTRLSEAYR 652

Query: 611 KLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T RY+LGN+ D+    +S+ Y D+P ID++AL QLE + + + ++YE+ +F  ++ 
Sbjct: 653 RIRNTCRYILGNIADFDPKRDSVDYGDMPEIDRWALHQLELLKEKVLKAYENCEFHVLYH 712

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  V++S FY D+ KDR+YT    S  RRS QT +   L ++V++ AP+L    ++
Sbjct: 713 AVNSFCTVEMSAFYLDILKDRVYTSRKDSVERRSAQTAMYQILDALVKLTAPVLSFTTDE 772

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVT 783
           VW+ +P         A E V  S++P L  ++R   + E   W  I++V   V+
Sbjct: 773 VWRYMP-------APAEESVHLSQFPQLKPEYRDNALVE--RWETIIKVRAEVS 817


>gi|424844791|ref|ZP_18269402.1| isoleucyl-tRNA synthetase [Jonquetella anthropi DSM 22815]
 gi|363986229|gb|EHM13059.1| isoleucyl-tRNA synthetase [Jonquetella anthropi DSM 22815]
          Length = 917

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 190/469 (40%), Positives = 272/469 (57%), Gaps = 37/469 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK T+ LP+T F MRA    +EP+I + W    V+ ++  KN +G  F  HDGPPYANG 
Sbjct: 5   YKSTLHLPQTDFPMRAGLAQKEPQILEFWKRKGVYDKLQKKNFNGPKFSFHDGPPYANGE 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQ--SLDEDAKKDLTPS 222
           +H+GHALNK LKD + +Y+ +  Y   YVPGWD HGLPIELKVL+   LD+D+   ++P 
Sbjct: 65  MHLGHALNKSLKDFVVKYRSMNGYACPYVPGWDTHGLPIELKVLKDGGLDKDS---ISPV 121

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           +LR K A+ A+  +  Q     R G +ADW +PY+TL PEYEAA+++    M  +GY+YR
Sbjct: 122 ELRQKCAETARYWIGRQKEGMIRLGCFADWEHPYMTLQPEYEAAELDALAGMVEKGYVYR 181

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVW 342
           G+KPV+W    +TALA AE+EY +   S SI+  + M         L  E    + + VW
Sbjct: 182 GQKPVYWCIDCQTALAAAEIEYGD-ETSPSIFVAYSMEDLSSKFPELAGE---PVSVVVW 237

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+PA+ AVAV  +  Y    ++                        K+++++   
Sbjct: 238 TTTPWTLPASMAVAVGLQYDYGFYRVE------------------------KRLYLLACG 273

Query: 403 DLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
            +    +A   T      T+ G  LE C   HP  +R+ P+V+  DY+T ++GTG VHTA
Sbjct: 274 MVDSVAQATGLTFGEPVLTVKGQALEGCVAFHPFLDRKTPIVLA-DYVTLDAGTGCVHTA 332

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG EDY T  +YG+ I +PVD  G+FT +     G+D+   G   V++ L +   L+ 
Sbjct: 333 PGHGVEDYETGCRYGIEIYNPVDGRGRFTPDTPLVGGMDI-EKGAQTVMQTLRDSGRLLG 391

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQ-VKWVP 570
            +   H YP+ WR  KP +FR+T+QWF +VE FR+ A+ AI + VKW+P
Sbjct: 392 VKKIVHSYPHCWRCHKPVVFRSTDQWFINVEAFREEALKAIDEDVKWMP 440



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 5/184 (2%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYD 635
           YGAD+LRLWV+S DY  D+ I  +++  + + YR++R T RYLLGNLH +    + + Y+
Sbjct: 620 YGADILRLWVASTDYRSDMRISYKIVDSLVESYRRIRNTARYLLGNLHGFNPSTDRVPYE 679

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
            +   D++ L  L   ++ + ESYE+Y+F      I +  + +LS+ Y DV KDRLY   
Sbjct: 680 KMGEFDRWVLALLNRTIRRVTESYENYEFHIPTMTIHQLCVNELSSVYLDVNKDRLYADP 739

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
                RR+ QTV+   L ++ R++AP+L   +E++WQ    A    D S  E VF ++WP
Sbjct: 740 ENDTARRATQTVMWELLTTLTRMLAPVLSFTSEEIWQ----AAKEIDPSLEESVFLAEWP 795

Query: 756 VLDE 759
             +E
Sbjct: 796 KPNE 799


>gi|329121488|ref|ZP_08250112.1| isoleucine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327469403|gb|EGF14873.1| isoleucine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 937

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 198/479 (41%), Positives = 272/479 (56%), Gaps = 44/479 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN---FVLHDGPPYAN 162
           Y  T+ LP+T F MR N   REPE  K W ++ ++ +  +K   EN   FVLHDGPPYAN
Sbjct: 3   YGKTLQLPQTEFPMRGNLPKREPEFVKFWQENNLYEKRIEKRSSENAPLFVLHDGPPYAN 62

Query: 163 GNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPS 222
           G +H+GHALNK LKDII RYK ++   V +VPGWD HGLPIE  VL+   ED + ++TP 
Sbjct: 63  GKIHIGHALNKTLKDIIVRYKFMEGNNVNFVPGWDTHGLPIEYAVLKESGED-RANMTPI 121

Query: 223 KLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYR 282
           +LR K  ++AK  +  Q   F R GV  DWNNPY+T D   EA QIEVFG+M+ +GYIY+
Sbjct: 122 ELRRKCLEYAKKWIAIQKEDFIRMGVIGDWNNPYVTYDKHLEARQIEVFGEMAKRGYIYK 181

Query: 283 GKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL-PDLGLAV 341
           GKK V+W  +  TALAEAE+EY E   S SIY  F +         LL E +  +   AV
Sbjct: 182 GKKTVYWCANCETALAEAEIEYKESK-SPSIYVKFPV----RDVKNLLPEGVSKEKAFAV 236

Query: 342 -WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
            WTTTPWT+PAN  + VN K  Y  V  +   E                       + ++
Sbjct: 237 IWTTTPWTIPANQHICVNPKFDYVWVHNKDADE-----------------------YYLM 273

Query: 401 ASDLVPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           + +L P    E K        + + G +LE   + HP+   +   V+ GD++T ++GTG 
Sbjct: 274 SKELAPKALEECKVENYEFAGRVMKGEELEMIEFSHPLVTDRVVHVLEGDHVTLDAGTGC 333

Query: 459 VHTAPGHGQEDYVTSLKY------GLPILSPVDDEGKFTEEAG-KFSGLDVLGDGNVAVV 511
           VHTAPGHG +D+   LKY         ++ PVD +G+ T+EAG +  GL ++ D     +
Sbjct: 334 VHTAPGHGSDDFNIHLKYVHAGKIDAEVICPVDAKGRMTKEAGEELEGL-LVWDAQGKEI 392

Query: 512 KYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
             L     L+ ++   H+YP+ WR K P I+RATEQWFAS+  +R AA+  +   K++P
Sbjct: 393 SLLAHAGRLLGKKSMRHQYPHCWRCKNPVIYRATEQWFASINDYRDAALKVVNDTKFIP 451



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 131/212 (61%), Gaps = 4/212 (1%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    ++G V  V PQ     YGADV+RLW++S DY GDV +  ++++QMSD+Y
Sbjct: 610 TVDGEGRKMSKSVGNV--VAPQTIINRYGADVMRLWIASSDYQGDVRLSDKIIKQMSDVY 667

Query: 610 RKLRGTLRYLLGNLHDWRV-GNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           RK+R T RYLL NL+D+ V  ++I Y+++  ID++AL +LE +   + ++Y++Y+F  ++
Sbjct: 668 RKIRNTYRYLLSNLYDFDVEKDAIPYNEMEEIDKWALLRLEQVRDQVTKAYKNYEFHVMY 727

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
            +I  F  VD+S  Y D+ KD+LY     S  RRS QT +   L+++ +++AP+L    E
Sbjct: 728 HVIHNFCTVDMSAIYLDILKDKLYEEVPNSKERRSAQTAIHEILVTLTKLMAPVLAFTTE 787

Query: 729 DVWQNLPFAYTLEDGSAAEFVFESKWPVLDEK 760
           +VWQ +      E     E   E+K   LDEK
Sbjct: 788 EVWQAMKHTSKDEKSVHLENWPEAKPEYLDEK 819


>gi|375264512|ref|YP_005021955.1| isoleucyl-tRNA synthetase [Vibrio sp. EJY3]
 gi|369839836|gb|AEX20980.1| isoleucyl-tRNA synthetase [Vibrio sp. EJY3]
          Length = 942

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 283/475 (59%), Gaps = 38/475 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W    ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLANREPEMLKRWYKEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q  SFKR G+  +W+ PY T+D + EA  I   G+++ +G++ +G 
Sbjct: 123 REKCREYAAGQVEGQKESFKRLGILGEWDKPYRTMDFDTEANIIRALGKIASKGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFR------MVSAPPSTSGLLNEFLPDLG 338
           KPVHW     +ALAEAE+EY +  VS SI   F+      ++S    T G  +E   D+ 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVRFKTADEAALLSKFELTEG--HEGKGDIS 239

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           + +WTTTPWT+PAN AV +   L+Y ++++    EGD+                     I
Sbjct: 240 IVIWTTTPWTLPANRAVCLRDDLEYVLIQV----EGDNPER------------------I 277

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           IVA++L   +  + G +       A G+DLE  ++ HP  +   P ++ GD++TT+SGTG
Sbjct: 278 IVAAELAKDVMDRAGIEHFHNLGFAKGADLELSQFQHPFYDFTVPAIL-GDHVTTDSGTG 336

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
           +VHTAPGHGQED+    KY L + +PV   G +  +   F+G  V    N AVV+ L E+
Sbjct: 337 VVHTAPGHGQEDFAVGQKYDLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVVETLKEK 395

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            +L+    YEH YP+ WR K P IFRAT QWF S++  G R  A++AI  V+W+P
Sbjct: 396 GALLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALEAIKGVQWMP 450



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 114/205 (55%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 601 VDGHGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 658

Query: 611 KLRGTLRYLLGNLHDWRVGNSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL+ +     I   +++  +D++A+ +     + I ++Y  Y    + Q
Sbjct: 659 RIRNTSRFFLANLNGFNPETDIVPAEEMVALDRWAVGRALAAQEEIVKAYGEYNTHAVMQ 718

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 719 RLMHFCSIEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALYYIVEALVRWMAPIMSFTADE 778

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FV   +W
Sbjct: 779 IWNEMP-------GKREKFVLCDEW 796


>gi|404494112|ref|YP_006718218.1| isoleucyl-tRNA ligase [Pelobacter carbinolicus DSM 2380]
 gi|84029525|sp|Q3A1R3.1|SYI_PELCD RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|77546132|gb|ABA89694.1| isoleucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 927

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 199/470 (42%), Positives = 269/470 (57%), Gaps = 37/470 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP T F MR N   REPEI + W    ++ ++ +      NF LHDGPPYANG+
Sbjct: 3   YKQTLNLPDTQFPMRGNLPKREPEILEKWQSMGLYEKMEEAGRTRPNFTLHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDI+ + + ++ +   YVPGWDCHGLPIEL V + L +  K+D+T  ++
Sbjct: 63  IHIGHALNKILKDIVLKSRRMKGFYAPYVPGWDCHGLPIELMVDKKLGK-KKRDMTKVEI 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +   +A   VK Q   F+R GV  +W+ PYLT+   YEA       +   +G +++GK
Sbjct: 122 RKECRVYADQWVKIQSEEFERLGVMGEWDRPYLTMTHHYEAVTARELARFVEKGGLFKGK 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLP-DLGLAVWT 343
           KP+HW  S  TALAEAE+EY + H S SIY  F      P+    LN+     L   +WT
Sbjct: 182 KPIHWCSSCVTALAEAEVEYAD-HKSPSIYVKFPFDGELPAE---LNDLAGRKLSFVIWT 237

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN AV +N  L YAVVE      GD                      +++A  
Sbjct: 238 TTPWTIPANLAVCLNPNLPYAVVET-----GDE--------------------LLVMAEG 272

Query: 404 LVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV  +  + G +   + KT      E     HP  +R   ++I GD++T E+GTG VHTA
Sbjct: 273 LVSGVMQELGLENYRVLKTFEAPIFERKTCRHPFYDRP-SLLILGDHVTLEAGTGCVHTA 331

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHGQ+DYV  L YGL + +PVD+ G++ E+   F G+ +    N AV   L E  +L+ 
Sbjct: 332 PGHGQDDYVVGLAYGLDVYNPVDNYGRYYEDVEFFGGMKI-NQANGAVNAKLTEVGALLK 390

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           E    H YP+ WR KKP IFRATEQWF S+E  G R+ A+  I  V WVP
Sbjct: 391 ESEVSHSYPHCWRCKKPIIFRATEQWFISMEANGLREKALGHINDVNWVP 440



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 124/202 (61%), Gaps = 4/202 (1%)

Query: 536 TKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGD 594
           T++ T +++       V+G  +    ++G V  V P+E    YGA++LRLWV++ DY  D
Sbjct: 580 TRELTPYKSVLTHGFVVDGKGKKMSKSVGNV--VAPEEVIKKYGAEILRLWVAAQDYRDD 637

Query: 595 VMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDD-LPMIDQYALFQLENIVK 653
           + I  ++L+++SD YR++R T RY+LGNL  +     +  DD L  +D++AL +LE++  
Sbjct: 638 IRISNEILQRLSDAYRRIRNTARYILGNLSGFDPSRDMVADDQLLELDRWALAKLEDLAG 697

Query: 654 NIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLL 713
            + ++YE Y+F  I+  +  F  V++S+FY DV KDRLY  GT S  RRS QT +   L 
Sbjct: 698 RVEKAYEDYEFHIIYHAVHNFCSVEMSSFYLDVLKDRLYVSGTDSIARRSAQTAMYRILD 757

Query: 714 SIVRVIAPILPHLAEDVWQNLP 735
            I R+IAP+L   AE++W  +P
Sbjct: 758 CITRLIAPVLSFTAEEIWAFMP 779


>gi|148826387|ref|YP_001291140.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229846022|ref|ZP_04466134.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|166200212|sp|A5UDA6.1|SYI_HAEIE RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|148716547|gb|ABQ98757.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229811026|gb|EEP46743.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 941

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 193/471 (40%), Positives = 285/471 (60%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T+F MR +   REP++ K W +  ++ ++   + G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETSFPMRGDLAKREPDMLKNWYEKNLYQKIRKASKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + ++ ++ 
Sbjct: 65  IHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKISAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYASEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIENGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD--LGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F + SA    +    +      L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPVESADEIEAKFSAQGRGQGKLSAIIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + V I  ++ G+DLE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGVEQVKILGSVKGADLELSRFHHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++   +Y LP+   V ++GKF      F+G  V  + N  V++ L E  +L+
Sbjct: 337 APDHGLDDFIVGKQYDLPMAGLVSNDGKFISMTEFFAGKGVF-EANPLVIEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 125/202 (61%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +      +  +++  +D++A+    +    I+++Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQHEIKDAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT   +S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKASSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++WQ+LP      + + AEFVF
Sbjct: 774 EIWQHLPQT----ESARAEFVF 791


>gi|145634139|ref|ZP_01789850.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145268583|gb|EDK08576.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 941

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 193/471 (40%), Positives = 285/471 (60%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T+F MR +   REP++ K W +  ++ ++   + G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETSFPMRGDLAKREPDMLKNWYEKNLYQKIRKASKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + ++ ++ 
Sbjct: 65  IHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKISAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYASEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIENGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD--LGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F + SA    +    +      L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPVESADEIEAKFSAQGRGQGKLSAIIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + V I  ++ G+DLE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGVEQVKILGSVKGADLELSRFHHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++   +Y LP+   V ++GKF      F+G  V  + N  V++ L E  +L+
Sbjct: 337 APDHGLDDFIVGKQYDLPMAGLVSNDGKFISMTEFFAGKGVF-EANPLVIEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 124/202 (61%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +      +  +D+  +D++A+    +    I+++Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPKRDLVKPEDMISLDRWAVACALDAQNEIKDAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++WQ+LP      + + AEFVF
Sbjct: 774 EIWQHLPQT----ESARAEFVF 791


>gi|344941266|ref|ZP_08780554.1| Isoleucyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|344262458|gb|EGW22729.1| Isoleucyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 943

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 192/477 (40%), Positives = 281/477 (58%), Gaps = 41/477 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP T F M+ N   REPE  K W++  ++ ++  +  G   F+LHDGPPYANG 
Sbjct: 5   YKKTLNLPNTAFPMKGNLAQREPERLKKWNEADLYNKIRQEFAGRPKFILHDGPPYANGE 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NK+LKDII + K L  +   YVPGWDCHGLPIEL+V + + +   K ++P+  
Sbjct: 65  IHIGHAVNKVLKDIIVKSKSLSGFDAPYVPGWDCHGLPIELQVEKKIGKAGVK-VSPAVF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   V  Q  +F R G+  DW +PYLT+D  +EA  +   G++S  G+I +G 
Sbjct: 124 RKACREYAGKQVNIQKEAFIRLGILGDWEHPYLTMDFAFEADIVRSLGKISQNGHIAKGA 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLN--EFLPD------ 336
           KPVHW     +ALAEAE+EY + H S ++   F++V       G L+    +P+      
Sbjct: 184 KPVHWCTDCGSALAEAEVEYEDKH-SPAVDVRFQVV----DEDGFLSRCHHVPEHEGSGP 238

Query: 337 LGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKV 396
           L + +WTTTPWT+PAN  VA+N  L+YAVV+ +                     KD  K 
Sbjct: 239 LSVVIWTTTPWTLPANQGVALNPDLEYAVVQCE---------------------KDGNKE 277

Query: 397 FIIVASDLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESG 455
            ++VA  L+     ++  +   +     G++LE+    HP  +RQ PV++ GD++TTE+G
Sbjct: 278 RLVVAEALLKDAMLRYDIENYHVVAYCKGAELEHQLLQHPFYDRQVPVIL-GDHVTTEAG 336

Query: 456 TGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLD 515
           TG VHTAPGHGQ+DYV  LKYGLP+ +PV ++G F      F+G  V  + N  V++ L+
Sbjct: 337 TGAVHTAPGHGQDDYVVGLKYGLPVDNPVGNDGVFLPNTEIFAGEHVF-NANAHVLEVLE 395

Query: 516 EQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           +Q  L+      H YP+ WR K P IFRAT QWF S++    R+ A+D + +V W+P
Sbjct: 396 QQGKLVHHVAILHSYPHCWRHKTPIIFRATPQWFISMDKNKLREQALDEVKRVAWIP 452



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 9/188 (4%)

Query: 569 VPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 627
           V PQ      GADVLRLWV++ DY G++ +  ++L + SD YR+LR T R+LL NL D+ 
Sbjct: 617 VAPQSVMKNLGADVLRLWVAATDYRGEMTVSDEILNRTSDGYRRLRNTARFLLSNLDDFD 676

Query: 628 -VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
              +++   DL  +D++ + +   + + ++ +Y++YQF  IFQ +  F ++DL  FY D+
Sbjct: 677 PAQHAVEDKDLLALDRWVVDRAYTLQEEVKMAYDTYQFQHIFQKVHHFCVIDLGGFYLDI 736

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 746
            KDR YT       RRS QT +   L ++ R +API+ + A+++WQ LP       G  +
Sbjct: 737 IKDRQYTAKADGLARRSAQTAMYHVLEALTRWLAPIISYTADEIWQYLP-------GERS 789

Query: 747 EFVFESKW 754
           E VF   W
Sbjct: 790 ESVFLETW 797


>gi|127512032|ref|YP_001093229.1| isoleucyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166229769|sp|A3QBX2.1|SYI_SHELP RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|126637327|gb|ABO22970.1| Isoleucyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 940

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 189/470 (40%), Positives = 275/470 (58%), Gaps = 30/470 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W + +++ ++ +   G   F+LHDGPPYANG+
Sbjct: 4   YKSTLNLPETEFPMRGNLAQREPEMLKSWTEKKLYQKIRESRTGAKPFILHDGPPYANGS 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH++NKILKDII + K L  +   Y+PGWDCHGLPIELKV Q + +  +K ++ ++ 
Sbjct: 64  IHIGHSVNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELKVEQKVGKPGQK-VSAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A A V  Q   F R GV  DW NPYLT++ + EA  +    ++   G++++G 
Sbjct: 123 RQKCREYAAAQVDGQREDFIRLGVLGDWQNPYLTMNFDTEANIVRSLAKVIDNGHLHKGV 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL-LNEFLPDLGLAVWT 343
           KPVHW     +ALAEAE+EY E   S +I   F  V      +   L +   ++   +WT
Sbjct: 183 KPVHWCTDCGSALAEAEVEY-EDKTSPAIDVAFVAVDQAAVLAKFGLEQSDAEVATVIWT 241

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  +++   + Y +VE                       KD  K  IIVA +
Sbjct: 242 TTPWTLPANRGLSMAGDIDYDLVEFT---------------------KDGSKRAIIVAQE 280

Query: 404 LVPTLEAKWGTKL-VIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           LV +   ++G +L  +  T+ G  LE  R+ HP  +   PV+I GD++T +SGTG+VHTA
Sbjct: 281 LVESCIERYGAELHSVLGTVKGQALELLRFKHPFYDFDVPVII-GDHVTVDSGTGVVHTA 339

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHGQ+D+V   KYGL + +PV D G +  +   F+G  V    N  VV  L+E+ +L+ 
Sbjct: 340 PGHGQDDFVIGQKYGLEVANPVGDNGVYKPDTEFFAGQHVF-KANDNVVALLEEKGALLN 398

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
              Y H YP+ WR K P IFRAT QWF S++  G R  ++  I + +W+P
Sbjct: 399 HVAYRHSYPHCWRHKTPIIFRATPQWFISMDQKGLRTQSLSEIEKTQWIP 448



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 122/205 (59%), Gaps = 9/205 (4%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           +V+G  +    +IG V   P Q     GAD+LRLWV++ DY+G++ +  ++L++ +D YR
Sbjct: 598 TVDGQGRKMSKSIGNVI-APLQVTNKLGADILRLWVAATDYSGEMTVSDEILKRSADAYR 656

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+LL NL+ +  V ++++ +D+  +D++ + +   +   I E+YE Y F  + Q
Sbjct: 657 RIRNTARFLLANLNGFDPVNDTVAIEDMVALDRWVVRRAAALQAEILEAYEQYNFHLVTQ 716

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  V+L +FY D+ KDR YT    S  RRSCQ+ L     ++VR IAPIL   A++
Sbjct: 717 KLMQFCSVELGSFYLDIIKDRQYTAKRDSLARRSCQSALFLIAEAMVRWIAPILSFTADE 776

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           VWQ+LP       G   EFVF   W
Sbjct: 777 VWQSLP-------GEREEFVFTQTW 794


>gi|417845230|ref|ZP_12491261.1| Isoleucyl-tRNA synthetase [Haemophilus haemolyticus M21639]
 gi|341955761|gb|EGT82215.1| Isoleucyl-tRNA synthetase [Haemophilus haemolyticus M21639]
          Length = 941

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 194/471 (41%), Positives = 285/471 (60%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T+F MR +   REP++ K W +  ++ ++ + + G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETSFPMRGDLAKREPDMLKNWYEKNLYQKIREASKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+ GWDCHGLPIELKV + L     + +T ++ 
Sbjct: 65  IHIGHAVNKILKDIIIKSKTALGFDSPYILGWDCHGLPIELKV-EGLVGKPNEKITAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIANGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLL--NEFLPDLGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F   SA    +      +    L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPAESADEIETKFAAQGKGQGKLSAVIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVN+ L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNSDLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + V I  ++ GSDLE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGIESVEILGSVKGSDLELTRFHHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++ S +Y +P+   V ++GKF      F+G  V  + N  VV+ L E  +L+
Sbjct: 337 APDHGLDDFIVSKQYNIPMAGLVGNDGKFISTTEFFAGKGVF-EANPLVVEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 123/202 (60%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +      +  +++  +D++A+    +  K I+++Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQKEIKDAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++W  LP   T    + AEFVF
Sbjct: 774 EIWGYLPQTAT----ARAEFVF 791


>gi|260775152|ref|ZP_05884050.1| isoleucyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608853|gb|EEX35015.1| isoleucyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 942

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 198/473 (41%), Positives = 278/473 (58%), Gaps = 34/473 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W    ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLANREPEMLKRWYKEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   +A   V+ Q  SFKR G+  +W+ PY T+D   EA  I   G+++  G++ +G 
Sbjct: 123 RQKCRDYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANIIRALGKIADNGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL-LNEFLP---DLGLA 340
           KPVHW     +ALAEAE+EY +  VS SI   F+        S   LNE      ++ + 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVRFKAADEAALLSKFSLNEGHEGEGEISIV 241

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AV +   L+Y ++++    EGDS                  K  IIV
Sbjct: 242 IWTTTPWTLPANRAVCLRDDLEYVLIQV----EGDS------------------KERIIV 279

Query: 401 ASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           AS+L   +  + G +       A GSDLE  ++ HP  +   P ++ GD++TT+SGTG+V
Sbjct: 280 ASELAKDVMDRAGIEHFHNLGFAKGSDLELSQFNHPFYDFTVPAIL-GDHVTTDSGTGVV 338

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHGQED+    KY L + +PV   G +  +   F+G  V    N AVV+ L E+ +
Sbjct: 339 HTAPGHGQEDFAVGNKYNLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVVETLKEKGA 397

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+++I  V+W+P
Sbjct: 398 LLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKGVEWMP 450



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 116/205 (56%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 601 VDGQGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 658

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL  +    + +  +++  +D++A+ +     + I ++Y  Y    + Q
Sbjct: 659 RIRNTARFFLANLSGFNPATDLVPAEEMVALDRWAVGRALAAQEEIVKAYGEYNTHAVTQ 718

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 719 RLMQFCSIEMGSFYLDVIKDRQYTAKLGGHAQRSCQTALYYIVEALVRWMAPIMSFTADE 778

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 779 IWNEMP-------GERDKFVFTGEW 796


>gi|163803544|ref|ZP_02197413.1| isoleucyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159172679|gb|EDP57532.1| isoleucyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 526

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 197/478 (41%), Positives = 283/478 (59%), Gaps = 42/478 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
            YK T++LP+T F MR N   REPE+ K W    ++  +     G+ +FVLHDGPPYANG
Sbjct: 3   EYKDTLNLPETGFPMRGNLANREPEMLKRWYKEDLYGEIRKAKQGKKSFVLHDGPPYANG 62

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++
Sbjct: 63  DIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQK-VTAAE 121

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A   V+ Q  SFKR G+  +W+ PY T+D   EA  I   G+++ QG++ +G
Sbjct: 122 FREKCREYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANIIRALGKIASQGHLLKG 181

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF--------LP 335
            KPVHW     +ALAEAE+EY +  VS SI   F+       T+ LL++F          
Sbjct: 182 FKPVHWCTDCGSALAEAEVEYKD-KVSPSIDVRFKAA----DTAALLSKFDLTEGHEGQG 236

Query: 336 DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
           D+ + +WTTTPWT+PAN AV +   L+Y +++     EG++A                  
Sbjct: 237 DVSIVIWTTTPWTLPANRAVCLRDDLEYVLIQT----EGENAER---------------- 276

Query: 396 VFIIVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
             IIVA++L   +  + G +       A G+DLE  ++ HP  +   P ++ GD++TT+S
Sbjct: 277 --IIVAAELAKDVMDRAGIEHFHNLGFAKGADLELSQFQHPFYDFTVPAIL-GDHVTTDS 333

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           GTG+VHTAPGHGQED+V   KY L + +PV   G +  +   F+G  V    N AVV+ L
Sbjct: 334 GTGVVHTAPGHGQEDFVVGNKYDLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVVEVL 392

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            E+ +L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+++I  V+W+P
Sbjct: 393 KEKGALLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKNVEWLP 450


>gi|156973299|ref|YP_001444206.1| isoleucyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|388600505|ref|ZP_10158901.1| isoleucyl-tRNA ligase [Vibrio campbellii DS40M4]
 gi|444427187|ref|ZP_21222579.1| isoleucyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
 gi|166229779|sp|A7MTD6.1|SYI_VIBHB RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|156524893|gb|ABU69979.1| hypothetical protein VIBHAR_00980 [Vibrio harveyi ATCC BAA-1116]
 gi|444239557|gb|ELU51119.1| isoleucyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
          Length = 942

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 282/475 (59%), Gaps = 38/475 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W    ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLANREPEMLKRWYKEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q  SFKR G+  +W+ PY T+D   EA  I   G+++ +G++ +G 
Sbjct: 123 REKCREYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANIIRALGKIASKGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFR------MVSAPPSTSGLLNEFLPDLG 338
           KPVHW     +ALAEAE+EY +  VS SI   F+      ++S    T G  +E   D+ 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVRFKAADEAALLSKFELTEG--HEGQGDIS 239

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           + +WTTTPWT+PAN AV +   L+Y +++     EGD+A                    I
Sbjct: 240 IVIWTTTPWTLPANRAVCLRDDLEYVLIQT----EGDNAER------------------I 277

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           IVA++L   +  + G +       A G+DLE  ++ HP  +   P ++ GD++TT+SGTG
Sbjct: 278 IVAAELAKDVMDRAGIEHFHNLGFAKGADLELSQFQHPFYDFTVPAIL-GDHVTTDSGTG 336

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
           +VHTAPGHGQED+    KY L + +PV   G +  +   F+G  V    N AVV+ L E+
Sbjct: 337 VVHTAPGHGQEDFAVGNKYNLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVVEVLKEK 395

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            +L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+++I  V+W+P
Sbjct: 396 GALLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKNVEWMP 450



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 116/205 (56%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 601 VDGHGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 658

Query: 611 KLRGTLRYLLGNLHDWRVGNSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL  +     I   +++  +D++A+ +     + I ++YE Y    + Q
Sbjct: 659 RIRNTARFFLANLSGFNPETDIVPVEEMVALDRWAVGRALAAQEEIVKAYEEYNTHGVTQ 718

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 719 RLMQFCSIEMGSFYLDVIKDRQYTAKRGGNAQRSCQTALYYIVEALVRWMAPIMSFTADE 778

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 779 IWNEMP-------GQRDKFVFTGEW 796


>gi|149377782|ref|ZP_01895515.1| isoleucyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149357954|gb|EDM46443.1| isoleucyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 939

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 190/474 (40%), Positives = 283/474 (59%), Gaps = 38/474 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           YKHT++LP+T F MR N   REP++ + W D  V+  +  + +G E F+LHDGPPYANG+
Sbjct: 4   YKHTLNLPETAFPMRGNLAKREPDMLQRWQDLDVYGNLRKQREGREKFILHDGPPYANGS 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKD+I + +    Y   YVPGWDCHGLPIE KV Q + +   K +     
Sbjct: 64  IHIGHAVNKILKDMIVKSRSFMGYDAPYVPGWDCHGLPIEHKVEQEIGKAGVK-VDYKTF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R     +A   +  Q A F R GV  +W  PYLT+DP+ EA  +   G++  +G++ RG 
Sbjct: 123 RQACRDYATKQIAGQKADFIRLGVMGEWEKPYLTMDPKVEAGIVRALGKIVAKGHLVRGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-----L 339
           KPV+WS   ++ALAEAE+EY +   S  I   F +V      + +L+ F  D G     +
Sbjct: 183 KPVYWSVVGQSALAEAEVEYQD-KTSVQIDVRFTVV----DQARVLDLFGTDKGAGDVSV 237

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN AV+++A+L+YA      L++ D+     +               +I
Sbjct: 238 VIWTTTPWTIPANQAVSLHAELEYA------LVQSDTGHGPER---------------MI 276

Query: 400 VASDLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A+D+V  + ++WG +   +  TL G+ LE     HPV ++Q P+++ GD+++T++GTG 
Sbjct: 277 LAADMVDGIMSRWGVESYEVLATLPGATLEKLDLHHPVYDKQVPLIL-GDHVSTDAGTGA 335

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQM 518
           VHTAP HG ED+     YG+  +S V  +G +T+ AG+F+G+ V    +  V   L+ + 
Sbjct: 336 VHTAPDHGMEDFEVGKAYGIDTISLVKADGTYTQAAGEFAGVHVY-KADDPVCSALEREG 394

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASV--EGFRQAAMDAIGQVKWVP 570
            L+  E + H YP+ WRTK P I+RAT QWF S+  E  R  A++AI  V+WVP
Sbjct: 395 KLVRAEKFSHSYPHCWRTKTPLIYRATPQWFISMDKESLRDDALEAIKGVRWVP 448



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 120/206 (58%), Gaps = 11/206 (5%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    ++G V  + PQE     GAD+LRLWVS+ DY+G++ +   +L+Q +D Y
Sbjct: 598 TVDGKGRKMSKSLGNV--IAPQEVMNELGADILRLWVSATDYSGEMTVSKDILKQTADGY 655

Query: 610 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL  +    ++++ +D+  +D++ + +   + K + E Y++Y F +I+
Sbjct: 656 RRIRNTARFLLSNLTGFDPEQHAVAPEDMIALDRWMVDKALQLQKELHEDYQNYAFLRIY 715

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q +  F    L  FY D+ KDR YT    S  RRSCQT L   + ++VR IAPIL   A+
Sbjct: 716 QKVYNFCEATLGGFYLDIIKDRQYTTQADSRERRSCQTALFHVVEALVRWIAPILSFTAD 775

Query: 729 DVWQNLPFAYTLEDGSAAEFVFESKW 754
           ++WQ+LP       G   + VF   W
Sbjct: 776 EIWQHLP-------GKRGDTVFYETW 794


>gi|59711074|ref|YP_203850.1| isoleucyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|423685180|ref|ZP_17659988.1| isoleucyl-tRNA synthetase [Vibrio fischeri SR5]
 gi|75354555|sp|Q5E7N4.1|SYI_VIBF1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|59479175|gb|AAW84962.1| isoleucyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|371495681|gb|EHN71276.1| isoleucyl-tRNA synthetase [Vibrio fischeri SR5]
          Length = 952

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 198/478 (41%), Positives = 281/478 (58%), Gaps = 41/478 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W D  ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLANREPEMLKRWYDEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   YVPGWDCHGLPIEL V +   +  +K ++ ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPIELMVEKKKGKPGQK-ISAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  K+A   V+ Q  SFKR GV  +W+ PY T+D   EA  I   G+++ QG++ +G 
Sbjct: 123 REECRKYAAGQVEGQKESFKRLGVMGEWDKPYRTMDFGTEANIIRSLGKIADQGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSI---------YAVFRMVSAPPSTSGLLNEFLP 335
           KPVHW     +ALAEAE+EY +  VS SI          A     S P    G       
Sbjct: 183 KPVHWCTDCGSALAEAEVEYQD-KVSPSIDVRFVAADEAATLAKFSTPEGHQG-----EG 236

Query: 336 DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
           +L + +WTTTPWT+PAN AVA++A L+Y +V++++  E                   QK 
Sbjct: 237 ELSVVIWTTTPWTLPANRAVALHADLEYVLVQVEAHGE-------------------QKA 277

Query: 396 VFIIVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
             +I+AS+L  ++  +   +       A GSDLE  ++ HP  N   P ++ G+++TT+S
Sbjct: 278 QRLILASELAKSVLDRANIEHYHNLGFAKGSDLELLQFNHPFYNFTVPAIL-GEHVTTDS 336

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           GTG+VHTAPGHGQED+V   KY L I +PV   G +  +   F+G  V    N +V++ L
Sbjct: 337 GTGIVHTAPGHGQEDFVVGKKYDLEIANPVGSNGVYLPDTELFAGQHVF-KANDSVLEVL 395

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            E+ +L+    YEH YP+ WR K P IFRAT QWF S++  G R  A++ +  V+W+P
Sbjct: 396 KEKGALLHHHAYEHSYPHCWRHKTPIIFRATPQWFISMDQAGLRAKALEEVKSVEWMP 453



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 115/205 (56%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYT +V +  ++L++ +D YR
Sbjct: 611 VDGNGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTNEVAVSDEILKRSADAYR 668

Query: 611 KLRGTLRYLLGNLHDWRVGNSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL  +     I   +++  +D++A+ +     + I +SY+ Y   ++ Q
Sbjct: 669 RIRNTARFFLANLSGFNPATDIVPAEEMVALDRWAVGRAFAAQQEIIKSYDEYNLHEVTQ 728

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 729 RLMHFCSIEMGSFYLDVIKDRQYTAKKGGHAQRSCQTALYYIVEALVRWMAPIMSFTADE 788

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 789 IWNEMP-------GEREKFVFTGEW 806


>gi|345428922|ref|YP_004822038.1| isoleucyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
 gi|301154981|emb|CBW14444.1| isoleucyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 941

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 196/471 (41%), Positives = 279/471 (59%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T F MR +   REP + K W D Q++ ++     G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETGFPMRGDLAKREPVMLKNWYDKQLYQKIRQATKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + +T ++ 
Sbjct: 65  IHIGHAVNKILKDIIVKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKVTAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++   EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFNTEANIIRTLGKVIANGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL--LNEFLPDLGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F  VSA         + +    L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPAVSAVEIEEKFNAVGKGHGKLSAVIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + V +  ++ G  LE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGVEQVEVLGSVKGQALELVRFNHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++   KY LP+   V ++GKF      F+G  V  + N  VV+ L E  +L+
Sbjct: 337 APDHGLDDFIVGQKYNLPMAGLVSNDGKFISTTEFFAGKGVF-EANPLVVEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I  V+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKGVRWIP 446



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 124/202 (61%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +    +++  +++  +D++A+    +  K I+E+Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPQRDAVKPEEMISLDRWAVACALDAQKEIKEAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++W  LP   T      AEFVF
Sbjct: 774 EIWGYLPQTAT----PRAEFVF 791


>gi|294054444|ref|YP_003548102.1| isoleucyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293613777|gb|ADE53932.1| isoleucyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 944

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 196/477 (41%), Positives = 276/477 (57%), Gaps = 42/477 (8%)

Query: 107 KHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKND-GENFVLHDGPPYANGNL 165
           K+T++LP+T F MR + + REP     W+   ++ R+  KN  G +F+LHDGPP+ NG+L
Sbjct: 6   KNTLNLPQTGFPMRGDLVKREPTRIDHWNSIDLYGRIQAKNAAGPSFILHDGPPFTNGDL 65

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNK LKD   R+K +Q Y   Y+PGWD HGLPIE KV + L E  + D TP ++R
Sbjct: 66  HLGHALNKTLKDTTLRFKWMQGYNAPYIPGWDSHGLPIEQKVSRELQEAGRTDYTPLEVR 125

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
              A FA    + Q   F+R GV ADW N Y T+  EYEAA++E       Q  +YR KK
Sbjct: 126 EACADFANKFREIQTDQFQRLGVLADWENEYWTIHTEYEAAELETVASFVEQDLVYRAKK 185

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PV+WS    TALAEAE+EY + H S SIY   ++     +   L  E   D  + +WTTT
Sbjct: 186 PVYWSIPYATALAEAEIEYRD-HTSISIYVKLKLSDEARAKLDLPEE---DSSVVIWTTT 241

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN AVAV+  ++Y+ +               K S  G          +IVA+ L+
Sbjct: 242 PWTLPANLAVAVHPNIEYSAI---------------KSSNQGT---------LIVATPLL 277

Query: 406 PTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPG 464
             + ++   + V    T  GS LE     HP  +R  P+++  +Y+TTESGTG VHTAPG
Sbjct: 278 EQVVSECALEDVETLATFLGSQLEKLEARHPFIDRPSPILL-AEYVTTESGTGCVHTAPG 336

Query: 465 HGQEDYVTSLKYGLPILSPVDDEGKFTEEA---GKFSGLDVLGD------GNVAVVKYLD 515
           HGQ+DY+T L  GL I  PVDD G + ++     +  GL VL +       N+ V+K + 
Sbjct: 337 HGQDDYITGLNNGLEIYCPVDDNGCYLDDGQVPAELVGLSVLDEAKKPSPANLGVLKIIA 396

Query: 516 EQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           +  SLI ++   H YP+ WR+K P +FRA +QWF +++  G RQ A++A+  V ++P
Sbjct: 397 QNGSLIAKKKINHSYPHCWRSKTPVVFRAVDQWFIALDKGGDRQRALEALNDVNFIP 453



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 116/195 (59%), Gaps = 6/195 (3%)

Query: 576 GYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISY 634
           GYGAD++RLW+ S DY GDV +  ++++ +++ YR +R TLRY +G+L+D+    ++++ 
Sbjct: 632 GYGADIIRLWICSQDYRGDVPVSDKIVKNVANNYRNIRNTLRYQIGSLYDFDPAQHTVAL 691

Query: 635 DDLPMIDQYALFQLENIVKNIRESYESYQFFKIF-QIIQRFIIVDLSNFYFDVAKDRLYT 693
           +DL  +D++AL +L  +V+N+ E+YESY+F + F + I  F    LS  Y D+ KDRLYT
Sbjct: 692 EDLHPVDKWALNELAQLVRNVTEAYESYEFHRAFKEFIDPFCSNTLSATYHDILKDRLYT 751

Query: 694 GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESK 753
                  RRS QT ++       R+IAP+LP  +++ W    FA    D +      E+ 
Sbjct: 752 YAPNDPLRRSSQTAIAIIFNVFTRLIAPLLPFTSDEAWS---FAANDSDFNDQPIALEA- 807

Query: 754 WPVLDEKWRTFPVGE 768
           WP ++  W    V +
Sbjct: 808 WPYVENGWDNTEVAD 822


>gi|323492574|ref|ZP_08097720.1| isoleucyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323313176|gb|EGA66294.1| isoleucyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 942

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 197/473 (41%), Positives = 279/473 (58%), Gaps = 34/473 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W    ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLANREPEMLKRWYQEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V +   +  +K ++ ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKKGKPGQK-ISAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  K+A   V+ Q  SFKR G+  +W+ PY T+D   EA  I   G+++  G++ +G 
Sbjct: 123 REECRKYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANIIRALGKIADNGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL-LNEFLP---DLGLA 340
           KPVHW     +ALAEAE+EY +  VS SI   F+   A    +   LNE      D+ + 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVRFKAADAEALLAKFDLNEGHEGEGDISIV 241

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AV +   L+Y ++++    EG+S                  K  IIV
Sbjct: 242 IWTTTPWTLPANRAVCLRDDLEYVLIQV----EGES------------------KERIIV 279

Query: 401 ASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           AS+L   +  + G +       A GSDLE  ++ HP  +   P ++ GD++TT+SGTG+V
Sbjct: 280 ASELAKDVMDRAGIEHFHNLGFAKGSDLELTQFNHPFYDFTVPAIL-GDHVTTDSGTGVV 338

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHGQED+    KY L + +PV   G +  +   F+G  V    N AVV+ L E+ +
Sbjct: 339 HTAPGHGQEDFAVGNKYNLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVVETLKEKGA 397

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+++I  V+W+P
Sbjct: 398 LLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKNVEWMP 450



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 115/205 (56%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 601 VDGHGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 658

Query: 611 KLRGTLRYLLGNLHDWRVGNSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL  +     I   +++  +D++A+ +     + I ++Y  Y    + Q
Sbjct: 659 RIRNTARFFLANLSGFNPATDIVPAEEMVALDRWAVGRALAAQEEIVKAYGEYNTHAVTQ 718

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 719 RLMQFCSIEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALYYIVEALVRWMAPIMSFTADE 778

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 779 IWNEMP-------GERDKFVFTGEW 796


>gi|451343651|ref|ZP_21912722.1| isoleucine-tRNA ligase [Eggerthia catenaformis OT 569 = DSM 20559]
 gi|449337748|gb|EMD16905.1| isoleucine-tRNA ligase [Eggerthia catenaformis OT 569 = DSM 20559]
          Length = 917

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 195/467 (41%), Positives = 275/467 (58%), Gaps = 38/467 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKN-DGENFVLHDGPPYANGN 164
           YK+T+ +P+T F MR     +EP+  + W++  ++ +V   N D E+++ HDGPPYANGN
Sbjct: 3   YKNTLLMPRTDFEMRGKLPAKEPQYVERWNNASMYEKVTKMNEDKEDWIFHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH LNKI+KD+I R+K L+ Y V Y+PGWD HGLPIE   +Q L  D +K ++ +  
Sbjct: 63  MHIGHMLNKIIKDVIVRHKTLEGYHVPYIPGWDTHGLPIE-NAIQKLGVD-RKSMSTADF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   +A   V+ QM    R G +AD+ +PYLTL  E+EA QI+VF +M+L G IY+G 
Sbjct: 121 RKKCYDYALKQVQKQMEQCIRVGTFADYKHPYLTLFKEFEANQIDVFAKMALDGLIYKGL 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +     +IY  F++        GLL+    D    +WTT
Sbjct: 181 KPVYWSPSSESALAEAEVEYHDVKAP-TIYVKFKVKDG----KGLLDN--KDTYFVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWTVPA+ A+ +N    YAVV                KS  GN         +IV  +L
Sbjct: 234 TPWTVPADQAICLNPNYTYAVV----------------KSEKGN---------LIVLEEL 268

Query: 405 VPTLEAKWG--TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           + +L   +    K VI++   G + E    VHP+   +  +VI GD++TTESGTG VHTA
Sbjct: 269 IDSLWEIFDLKEKEVIQR-FTGKEAEYITTVHPLYPDRESLVICGDHVTTESGTGCVHTA 327

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
            G G +D+     Y +P+   VD+ G   E+ G++     + D N  V + L EQ  L+ 
Sbjct: 328 SGFGVDDFNICHDYNIPVYVNVDEHGCMMEDCGEWLAGQYVEDANKTVTERLYEQGDLLN 387

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWV 569
                H YP+DWRTKKP IFRAT+QWF S++  R+  +D I +V WV
Sbjct: 388 LTWITHSYPHDWRTKKPIIFRATDQWFCSIDKIREKLLDEIDKVDWV 434



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 5/188 (2%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +    YGAD+LRLW ++ DY  DV I  ++++ +S+ YRK+R TLR++LGNL+D++  
Sbjct: 606 PIKIVNQYGADILRLWATTCDYQSDVRISQEIMKGVSESYRKIRNTLRFMLGNLNDFKEN 665

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
           N +S D L  +D Y L +L  ++    +S   Y F    ++I  ++   +S+FY D  KD
Sbjct: 666 NLVSIDLLDSVDIYMLAKLNTVLTEYHDSMNKYDFSGANKVILNYLTNTMSSFYMDFTKD 725

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 749
            LY        RR  QTVL     +I ++I+P+L   AE++       Y   D    E +
Sbjct: 726 ILYCNDKEDSRRRKVQTVLYYCAKTITKLISPVLVFTAEEI-----HDYFNCDNHKEESI 780

Query: 750 FESKWPVL 757
           F  K P L
Sbjct: 781 FLEKSPEL 788


>gi|424042587|ref|ZP_17780284.1| isoleucine--tRNA ligase [Vibrio cholerae HENC-02]
 gi|408888962|gb|EKM27414.1| isoleucine--tRNA ligase [Vibrio cholerae HENC-02]
          Length = 942

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 282/475 (59%), Gaps = 38/475 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W    ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLANREPEMLKRWYKEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q  SFKR G+  +W+ PY T+D   EA  I   G+++ +G++ +G 
Sbjct: 123 REKCREYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANIIRALGKIASKGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFR------MVSAPPSTSGLLNEFLPDLG 338
           KPVHW     +ALAEAE+EY +  VS SI   F+      ++S    T G  +E   D+ 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVRFKAADEAALLSKFELTEG--HEGQGDVS 239

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           + +WTTTPWT+PAN AV +   L+Y +++     EGD+A                    I
Sbjct: 240 IVIWTTTPWTLPANRAVCLRDDLEYVLIQT----EGDNAER------------------I 277

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           IVA++L   +  + G +       A G+DLE  ++ HP  +   P ++ GD++TT+SGTG
Sbjct: 278 IVAAELAKDVMDRAGIEHFHNLGFAKGADLELSQFQHPFYDFTVPAIL-GDHVTTDSGTG 336

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
           +VHTAPGHGQED+    KY L + +PV   G +  +   F+G  V    N AVV+ L E+
Sbjct: 337 VVHTAPGHGQEDFAVGNKYNLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVVEVLKEK 395

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            +L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+++I  V+W+P
Sbjct: 396 GALLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKNVEWMP 450



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 116/205 (56%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 601 VDGHGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 658

Query: 611 KLRGTLRYLLGNLHDWRVGNSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL  +     I   +++  +D++A+ +     + I ++YE Y    + Q
Sbjct: 659 RIRNTARFFLANLSGFNPETDIVPVEEMVALDRWAVGRALAAQEEIVKAYEEYNTHGVTQ 718

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 719 RLMQFCSIEMGSFYLDVIKDRQYTAKRGGNAQRSCQTALYYIVEALVRWMAPIMSFTADE 778

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 779 IWNEMP-------GERDKFVFTGEW 796


>gi|419802150|ref|ZP_14327351.1| isoleucine--tRNA ligase [Haemophilus parainfluenzae HK262]
 gi|385191472|gb|EIF38886.1| isoleucine--tRNA ligase [Haemophilus parainfluenzae HK262]
          Length = 941

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 196/471 (41%), Positives = 279/471 (59%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T F MR +   REP + K W D Q++ ++     G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETGFPMRGDLAKREPVMLKNWYDKQLYQKIRQATKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + +T ++ 
Sbjct: 65  IHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKVTAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++   EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFNTEANIIRTLGKVIANGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL--LNEFLPDLGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F  VSA         + +    L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPAVSAVEIEEKFNAVGKGHGKLSAVIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + V +  ++ G  LE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGVEQVEVLGSVKGQALELVRFNHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++   KY LP+   V ++GKF      F+G  V  + N  VV+ L E  +L+
Sbjct: 337 APDHGLDDFIVGQKYNLPMAGLVSNDGKFISTTEFFAGKGVF-EANPLVVEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I  V+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKGVRWIP 446



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 125/202 (61%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +    +++  +D+  +D++A+    +  K I+++Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPQRDAVKPEDMISLDRWAVACALDAQKEIKDAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++W  LP   T    + AEFVF
Sbjct: 774 EIWGYLPQTAT----TRAEFVF 791


>gi|345869587|ref|ZP_08821544.1| Isoleucyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
 gi|343922970|gb|EGV33667.1| Isoleucyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
          Length = 942

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 189/475 (39%), Positives = 275/475 (57%), Gaps = 37/475 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LPKT F M+AN   REPE+ K W+   ++ R+ +   G   F+LHDGPPYANGN
Sbjct: 4   YKNTLNLPKTGFAMKANLAQREPEMLKHWESLDLYGRIREARAGAPTFILHDGPPYANGN 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NK+LKDII + + L      YVPGWDCHGLPIEL+V +   +  +K ++ ++ 
Sbjct: 64  IHIGHAVNKVLKDIIVKARTLDGMNAPYVPGWDCHGLPIELQVEKKKGKPGQK-ISAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   V  Q A FKR GV+ DW  PYLT+D  +EA  +   G++   G++ +G+
Sbjct: 123 RVACREYAAKQVDGQRADFKRLGVFGDWERPYLTMDFGFEADIVRSLGRIIANGHLQKGE 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD------LG 338
           KPVHW     +ALAEAE+EY +    +S+    R     P+         P+      + 
Sbjct: 183 KPVHWCIDCGSALAEAEVEYAD---KQSLAIDVRFPVIDPTLLAERCHGTPNGCGEGPVS 239

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           + +WTTTPWT+PAN AVA+NA+L Y +VE  S                     +  K  +
Sbjct: 240 VVIWTTTPWTLPANQAVALNAELDYVIVEADS---------------------ETGKERL 278

Query: 399 IVASDLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           IVA  L+     +WG +   +     G D E  +  HP  +R+ PV++ G+++T ++GTG
Sbjct: 279 IVAEGLLKDTMDRWGIEHYRVVGYGRGIDFEGIKLRHPFYDREVPVIV-GEHVTLDAGTG 337

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
            VHTAPGHG EDY+   +YGLP+ +PV   G+F      F G +V    N  VV+ L  +
Sbjct: 338 AVHTAPGHGLEDYIVGQRYGLPVDNPVGGNGRFLPGTPLFEGENVF-QANEHVVEILKSK 396

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASV--EGFRQAAMDAIGQVKWVP 570
            +L++E  + H YP+ WR K P IFRAT QWF S+  +G R+ A+  I +V W+P
Sbjct: 397 GALMLETRFTHSYPHCWRHKTPIIFRATPQWFISMDKQGLREGALHEIEKVDWMP 451



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 114/188 (60%), Gaps = 9/188 (4%)

Query: 569 VPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR 627
           V PQ+     GAD++RLWV++ DY G++ +  ++L++ +D YR++R T R+LL NL+ + 
Sbjct: 616 VSPQDVMKTLGADIIRLWVAATDYRGEISVSDEILKRTADAYRRIRNTARFLLANLNGFD 675

Query: 628 -VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
              N ++  D+  +D++A+ +   + + +  +Y  YQF  I+Q +Q+F +VDL  FY DV
Sbjct: 676 PAANLVAPADMIALDRWAVDRAWRLQQEVIAAYGDYQFHLIYQKVQQFCVVDLGGFYLDV 735

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAA 746
            KDR YT  + S  RRSCQ+ +   + ++ R +APIL   A+++WQ +P       G  A
Sbjct: 736 IKDRQYTTQSDSLARRSCQSAMYHIVEAMSRWLAPILSFTADEIWQAIP-------GERA 788

Query: 747 EFVFESKW 754
           E VF   W
Sbjct: 789 ETVFTETW 796


>gi|160914286|ref|ZP_02076507.1| hypothetical protein EUBDOL_00296 [Eubacterium dolichum DSM 3991]
 gi|158433913|gb|EDP12202.1| isoleucine--tRNA ligase [Eubacterium dolichum DSM 3991]
          Length = 908

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 193/468 (41%), Positives = 270/468 (57%), Gaps = 38/468 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANG 163
            YK T+ +PKT F MR     +EP+  + W    ++ ++  K +G E FVLHDGPPYANG
Sbjct: 2   EYKDTLLMPKTGFEMRGKLPTKEPDFQQRWQSSHIYEKMLAKREGCEPFVLHDGPPYANG 61

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++H+GHALNKILKD+I R   +  Y   Y+PGWD HGLPIE  + + L  D KK +  S+
Sbjct: 62  DIHLGHALNKILKDVIVRSHFMDGYYTPYIPGWDTHGLPIETAITK-LGHDRKK-MGISE 119

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R     +A   V+ Q   F   G   D++N Y+TL  E+E  QI +FG+M++ G IY+G
Sbjct: 120 FRKLCYDYALEQVERQKKGFLSLGSVGDYDNAYVTLTKEFEEEQIRIFGKMAMDGLIYKG 179

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
            KPV+WSPSS +ALAEAE+EY +   S +I+  F +        G+L+    D    +WT
Sbjct: 180 LKPVYWSPSSESALAEAEIEYHDIK-SPTIFVKFMVKDG----KGILDN---DCAFVIWT 231

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN A+ +N    YA+VE +                         K  +IV  +
Sbjct: 232 TTPWTIPANLAICLNKDFTYALVETE-------------------------KGKLIVLEE 266

Query: 404 LVPTLEAKWGTKLVIK-KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           L+ +L  K+G +   K  T  G +LE     HP+ +R+  +VI GD++T ++GTG VHTA
Sbjct: 267 LMDSLFDKFGLETRNKLATFKGKELEMITCAHPLYDRE-SLVILGDHVTADAGTGCVHTA 325

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PG G +D+    KYGLP    VD+ G   +EAG++     + D N  V + LDE  +L+ 
Sbjct: 326 PGFGADDFFVGQKYGLPAYCNVDEHGCMMKEAGEWLEGQYVDDANKTVTQKLDEIGALLK 385

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            E   H YP+DWRTKKP IFRAT QWFAS++  R   +D I +V W+P
Sbjct: 386 LEFITHSYPHDWRTKKPIIFRATTQWFASIDKIRTQLLDEIDKVDWIP 433



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 7/164 (4%)

Query: 574 APG-----YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLH--DW 626
           APG     +GAD+LRLW +SVDY  D  +  ++++Q+S+ YRK+R T R+LL N++  D+
Sbjct: 603 APGEITKKFGADILRLWAASVDYQADCSMSDEIMKQVSENYRKVRNTFRFLLANINEEDF 662

Query: 627 RVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDV 686
              + +    LP +D+Y L QL  +    +++Y+ Y+F  +  ++   +  D S +Y D 
Sbjct: 663 TKEDLVDIATLPELDKYMLLQLNEVNDKAKKAYKEYRFADVTTMLTTLMTNDFSAYYLDY 722

Query: 687 AKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDV 730
            KD LY        RR  QTVL   +  ++R+ APILPH AE+V
Sbjct: 723 TKDILYIEKKDDVRRRQVQTVLYHAVNVLMRLWAPILPHTAEEV 766


>gi|197335481|ref|YP_002155222.1| isoleucyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|254782453|sp|B5FA60.1|SYI_VIBFM RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|197316971|gb|ACH66418.1| isoleucyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 952

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 198/478 (41%), Positives = 281/478 (58%), Gaps = 41/478 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W D  ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLANREPEMLKRWYDEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   YVPGWDCHGLPIEL V +   +  +K ++ ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPIELMVEKKKGKPGQK-ISAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  K+A   V+ Q  SFKR GV  +W+ PY T+D   EA  I   G+++ QG++ +G 
Sbjct: 123 REECRKYAAGQVEGQKESFKRLGVMGEWDKPYRTMDFGTEANIIRSLGKIADQGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSI---------YAVFRMVSAPPSTSGLLNEFLP 335
           KPVHW     +ALAEAE+EY +  VS SI          A     S P    G       
Sbjct: 183 KPVHWCTDCGSALAEAEVEYQD-KVSPSIDVRFVAADEAATLAKFSTPEGHQG-----EG 236

Query: 336 DLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
           +L + +WTTTPWT+PAN AVA++A L+Y +V++++  E                   QK 
Sbjct: 237 ELSVVIWTTTPWTLPANRAVALHADLEYVLVQVEAHGE-------------------QKA 277

Query: 396 VFIIVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
             +I+AS+L  ++  +   +       A GSDLE  ++ HP  N   P ++ G+++TT+S
Sbjct: 278 QRLILASELAKSVLDRANIEHYHNLGFAKGSDLELLQFNHPFYNFTVPAIL-GEHVTTDS 336

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           GTG+VHTAPGHGQED+V   KY L I +PV   G +  +   F+G  V    N +V++ L
Sbjct: 337 GTGIVHTAPGHGQEDFVVGKKYDLEIANPVGSNGVYLPDTELFAGQHVF-KANDSVLEVL 395

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            E+ +L+    YEH YP+ WR K P IFRAT QWF S++  G R  A++ +  V+W+P
Sbjct: 396 KEKGALLHHHAYEHSYPHCWRHKTPIIFRATPQWFISMDQAGLRAKALEEVKSVEWMP 453



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 115/205 (56%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYT +V +  ++L++ +D YR
Sbjct: 611 VDGNGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTNEVAVSDEILKRSADAYR 668

Query: 611 KLRGTLRYLLGNLHDWRVGNSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL  +     I   +++  +D++A+ +     + I +SY+ Y   ++ Q
Sbjct: 669 RIRNTARFFLANLSGFNPATDIVPAEEMVALDRWAVGRAFAAQQEIIKSYDEYNLHEVTQ 728

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 729 RLMHFCSIEMGSFYLDVIKDRQYTAKKGGHAQRSCQTALYYIVEALVRWMAPIMSFTADE 788

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 789 IWNEMP-------GEREKFVFTGEW 806


>gi|56964107|ref|YP_175838.1| isoleucyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81822091|sp|Q5WFI3.1|SYI_BACSK RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|56910350|dbj|BAD64877.1| isoleucyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 923

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 200/468 (42%), Positives = 286/468 (61%), Gaps = 40/468 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YK T+ +PKT F MR N    EP+  + W++  ++ +V ++ +G   FVLHDGPPYANG+
Sbjct: 3   YKQTLLMPKTAFPMRGNLPNSEPKRQEQWEEMDIYKQVQERTEGRPYFVLHDGPPYANGD 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +HMGHALNKI+KD I RYK +  +   YVPGWD HGLPIE  + ++   D +K ++ +  
Sbjct: 63  IHMGHALNKIIKDFIVRYKSMSGFHAPYVPGWDTHGLPIETALTKNKKVD-RKSMSIADF 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   + +Q   F R GV  DW  PY+TL+ E+EA QI+VFG+M+ +GYIY+GK
Sbjct: 122 RKLCEEYALEQINSQRQQFMRLGVRGDWWKPYITLEKEFEAEQIKVFGKMAKKGYIYKGK 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS +ALAEAE+EY +   S SIY  F++        G+L E   D  L +WTT
Sbjct: 182 KPVYWSPSSESALAEAEIEYYDKR-SASIYVAFQVADG----KGVLPE---DAALVIWTT 233

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+PAN  + V+ +L+Y+VV                  R G       + F +VAS L
Sbjct: 234 TPWTIPANLGITVHPQLEYSVV------------------RTGG------RSF-VVASGL 268

Query: 405 VPTL--EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTA 462
           +  +  E  W   +V++KT+ G +L+     HP  +R   +V+ G+++T ++GTG VHTA
Sbjct: 269 LEHVQTELSW-EDVVVEKTVTGKELDYIVCRHPFYDRDS-IVMNGEHVTLDAGTGCVHTA 326

Query: 463 PGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           PGHG +D+V   KYGL +L P+DD+G  T EA  F G +   + N  V + L+   +L+ 
Sbjct: 327 PGHGVDDFVVGQKYGLDVLCPIDDKGIMTSEAPGFEG-EFYDNINKMVTEKLEAVGALLK 385

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
                H YP+DWRTKKP IFRAT QWFAS+   R+  + A+   +W+P
Sbjct: 386 LGFITHSYPHDWRTKKPVIFRATSQWFASIANIRKELLQAVANTEWIP 433



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 105/168 (62%), Gaps = 1/168 (0%)

Query: 569 VPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRV 628
           VP       GAD+LRLWV+SVDY  D  +   +L+Q+++ YRK+R T R+LLGNLHD+  
Sbjct: 604 VPNTVMKQLGADILRLWVASVDYQADSRVSDSILKQVAETYRKIRNTFRFLLGNLHDFDP 663

Query: 629 G-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVA 687
             N++  D L  +  + L +L  + K + E Y  YQF  ++   + F  V+LS+FY D++
Sbjct: 664 KINAVPRDQLTGVHAFLLVRLNELTKRMHEGYNEYQFLNVYNHFRNFCTVELSSFYMDIS 723

Query: 688 KDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           KD LY        RR+ QTV+   + ++ ++IAPILPH A++VW+N+P
Sbjct: 724 KDTLYIEHADHPERRAFQTVMYEVVTALTKLIAPILPHTADEVWENIP 771


>gi|289548851|ref|YP_003473839.1| isoleucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182468|gb|ADC89712.1| isoleucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 926

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 198/477 (41%), Positives = 283/477 (59%), Gaps = 51/477 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           Y+ T++LP+T F M+A+   +EP I + W D    LR A K D   FVLHDGPPYANG++
Sbjct: 4   YRDTLNLPRTEFPMKASLPQKEPHILQKWKDLYQRLREARK-DCPTFVLHDGPPYANGHI 62

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDA--KKDLTPSK 223
           H+GHALNKILKD+IN+Y LL+ Y+V YVPGWDCHGLPIE +V + L      K+DL   +
Sbjct: 63  HIGHALNKILKDVINKYWLLKGYRVDYVPGWDCHGLPIEQQVEKELKAKKIRKEDLPKVE 122

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++A+  V+ Q   F R GV +DW+NPYLT+DP Y+A +I   G++  +G + R 
Sbjct: 123 FRRLCREYAERFVQIQKEEFVRLGVLSDWDNPYLTMDPLYQAQEIRELGRLFSKGLVVRS 182

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+W    +TA AEAE+EY +     S+Y  F + ++            P+L L VWT
Sbjct: 183 KKPVYWCIYDKTAEAEAEVEYYQKE-DPSVYVKFPVKNS------------PNLYLVVWT 229

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  V V    +Y   ++                       D+K    IVA +
Sbjct: 230 TTPWTLPANRGVMVGENYRYIFWKV-----------------------DEK--IYIVAEE 264

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           L+ +L+ K G +  + K + G DL +  Y+ P  +++   V   +++   +GTG+VH AP
Sbjct: 265 LLESLKEKLGKEGQVIKRVTGKDLLHMEYIPPY-HQEPQKVYPSEFVELSAGTGIVHMAP 323

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKF-SGLDVLGDGNVAVVKYLDEQMSLIM 522
           GHG+EDY   L+YG+   SPVDDEG+FT++A  F  G+ V  + N  +++ L ++  L+ 
Sbjct: 324 GHGREDYTVGLRYGIEPFSPVDDEGRFTQDAPSFLQGVRVF-EANQLILEDLRKRGLLLH 382

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWF----ASVEG---FRQAAMDAIGQVKWVPPQ 572
           EE   H YP+ WR K P IFRAT+QWF    A VEG    R+  ++ I +V+W+PPQ
Sbjct: 383 EEKIVHSYPHCWRCKNPVIFRATDQWFVNLSAPVEGGKTLRELCLEEIHKVRWIPPQ 439



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 126/201 (62%), Gaps = 7/201 (3%)

Query: 562 AIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 620
           ++G V  V PQE    YGAD+LRLWV S DYT D+ +G  +L+++++ Y+K+R TLR+LL
Sbjct: 603 SLGNV--VSPQEVLKEYGADILRLWVVSEDYTEDIRLGKGILQRLAEDYKKIRNTLRFLL 660

Query: 621 GNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
           GNL+D+ + N++ Y +L  +D++ +  L+ +++ +   Y+ Y F ++F +I+ F  V+LS
Sbjct: 661 GNLYDFTIQNTVEYQNLHPLDRWMVSYLQKVLEKMHLYYQEYTFHRVFHLIRNFCSVELS 720

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTL 740
           +FY DV KDRLY     S+ RRS QTVL   L+++   +AP L   AE+VW ++      
Sbjct: 721 SFYLDVLKDRLYVYAPDSWERRSAQTVLYQLLIALTTGVAPFLSFTAEEVWDHVRKI--- 777

Query: 741 EDGSAAEFVFESKWPVLDEKW 761
            D S  + VF  + P  D  W
Sbjct: 778 -DPSLPDSVFLYRMPEPDPAW 797


>gi|77359865|ref|YP_339440.1| isoleucyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|84029560|sp|Q3IEA2.1|SYI_PSEHT RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|76874776|emb|CAI85997.1| isoleucyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 942

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 189/472 (40%), Positives = 286/472 (60%), Gaps = 31/472 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YKHT++LP+T F MR N   REP++ K W +  ++ ++     G+  F+LHDGPPYANG+
Sbjct: 4   YKHTLNLPETPFPMRGNLAQREPKMLKAWYEDDLYGQIRSAKKGKKTFILHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH++NKILKDII + K L ++    VPGWDCHGLPIEL V + + +   K +T S+ 
Sbjct: 64  IHLGHSVNKILKDIIVKSKTLSDFDSPLVPGWDCHGLPIELMVEKKVGKPGVK-VTASEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   +AK  V+ Q   FKR GV+ADW+ PYLT++ ++EA  I V G++  +G++++G 
Sbjct: 123 REKCRAYAKKQVEGQKVDFKRLGVFADWDKPYLTMNFDFEANAIRVLGRIIEKGHLHKGA 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHV-SRSIYAVFRMVSAPPSTSGLLN--EFLPDLGLAV 341
           KPVHW     +ALAEAE+EY +    +  +  +F    A  S   L +  +    +G  +
Sbjct: 183 KPVHWCTDCGSALAEAEVEYQDKQSPAIDVRFIFNDQDAVVSAFDLADGHKGTGKVGTVI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+PAN AVAV+A+L+YA+V+++   EG                   K+  +I+ 
Sbjct: 243 WTTTPWTLPANRAVAVHAELEYALVQVED--EG-------------------KQQRLILG 281

Query: 402 SDLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           S+LV     ++G  +  +   + G+ LEN +  HP  +   PV++  +++TT+SGTG+VH
Sbjct: 282 SELVKDAMDRFGFNQFHVLGYVKGAALENLQVAHPFYDFSVPVIV-AEHVTTDSGTGVVH 340

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHGQED+V  L+Y L + +PV   G +  +   F+G  V    N ++V+ L E  +L
Sbjct: 341 TAPGHGQEDFVAGLEYKLEVANPVGANGVYLPDTELFAGQHVF-KANASIVEVLKEHGAL 399

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           +      H YP+ WR K P IFRAT QWF S++    RQ +++ I   +W+P
Sbjct: 400 MHHHAITHSYPHCWRHKTPIIFRATPQWFISMDQANLRQDSLNEIKNTQWLP 451



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 8/178 (4%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWV+S DYT ++ +  ++  + +D YR++R T RYLL NL+ +    + ++ +D
Sbjct: 627 GADILRLWVASTDYTAEMTVSDEIFNRSADRYRRIRNTSRYLLANLNGFDPKTDQVAVND 686

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +D++ + +   +   I  +Y+SYQ   + Q +  F   +L +FY DV KDR YT  +
Sbjct: 687 MVELDKWIVGRAAQLQTEILAAYDSYQMLLVTQKLMNFCTGELGSFYLDVIKDRQYTAKS 746

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW 754
            S  RRSCQT L     ++ R +API+   A+++W+ LP       G  +++VF S W
Sbjct: 747 DSHARRSCQTALYHIAEAMTRWMAPIMSFTAQEIWEALP-------GERSDYVFTSTW 797


>gi|68249550|ref|YP_248662.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81336023|sp|Q4QLU5.1|SYI_HAEI8 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|68057749|gb|AAX88002.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 941

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 193/471 (40%), Positives = 284/471 (60%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T+F MR +   REP++ K W +  ++ ++   + G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETSFPMRGDLAKREPDMLKNWYEKNLYQKIRKASKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + ++ ++ 
Sbjct: 65  IHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKISAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYASEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIENGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD--LGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F   SA    +    +      L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPAESAVEIEAKFSAQGRGQGKLSAIIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + V I  ++ G+DLE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGVEQVEILGSVKGADLELSRFHHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++   +Y LP+   V ++GKF      F+G  V  + N  V++ L E  +L+
Sbjct: 337 APDHGLDDFIVGKQYDLPMAGLVSNDGKFISTTEFFAGKGVF-EANPLVIEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 124/202 (61%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +      +  +++  +D++A+    +    I+++Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQNEIKDAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++WQ+LP      + + AEFVF
Sbjct: 774 EIWQHLPQT----ESARAEFVF 791


>gi|153834658|ref|ZP_01987325.1| isoleucyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148868910|gb|EDL67968.1| isoleucyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 942

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 282/475 (59%), Gaps = 38/475 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W    ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLANREPEMLKRWYKEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q  SFKR G+  +W+ PY T+D   EA  I   G+++ +G++ +G 
Sbjct: 123 REKCREYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANIIRALGKIASKGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFR------MVSAPPSTSGLLNEFLPDLG 338
           KPVHW     +ALAEAE+EY +  VS SI   F+      ++S    T G  +E   D+ 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVRFKAADEAALLSKFELTEG--HEGQGDVS 239

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           + +WTTTPWT+PAN AV +   L+Y +++     EGD+A                    I
Sbjct: 240 IVIWTTTPWTLPANRAVCLRDDLEYVLIQT----EGDNAER------------------I 277

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           IVA++L   +  + G +       A G+DLE  ++ HP  +   P ++ GD++TT+SGTG
Sbjct: 278 IVAAELAKDVMDRAGIEHFHNLGFAKGADLELSQFQHPFYDFTVPAIL-GDHVTTDSGTG 336

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
           +VHTAPGHGQED+    KY L + +PV   G +  +   F+G  V    N AVV+ L E+
Sbjct: 337 VVHTAPGHGQEDFAVGNKYNLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVVEVLKEK 395

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            +L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+++I  V+W+P
Sbjct: 396 GALLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKNVEWMP 450



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 116/205 (56%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 601 VDGHGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 658

Query: 611 KLRGTLRYLLGNLHDWRVGNSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL  +     I   +++  +D++A+ +     + I ++YE Y    + Q
Sbjct: 659 RIRNTARFFLANLSGFNPETDIVPVEEMVALDRWAVGRALAAQEEIVKAYEEYNTHGVTQ 718

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 719 RLMQFCSIEMGSFYLDVIKDRQYTAKRGGNAQRSCQTALYYIVEALVRWMAPIMSFTADE 778

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 779 IWNEMP-------GQRDKFVFTGEW 796


>gi|329122984|ref|ZP_08251555.1| isoleucine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327471915|gb|EGF17355.1| isoleucine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 941

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 192/471 (40%), Positives = 285/471 (60%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T+F MR +   REP++ K W +  ++ ++ + + G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETSFPMRGDLAKREPDMLKNWYEKNLYQKIREASKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + ++ ++ 
Sbjct: 65  IHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKISAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIENGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD--LGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F   SA    +    +      L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPAESADEIEAKFSAQGRGQGKLSAIIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + + I  ++ G+DLE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGIEHIEILGSVKGADLELSRFHHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++   +Y LP+   V ++GKF      F+G  V  + N  V++ L E  +L+
Sbjct: 337 APDHGLDDFIVGKQYDLPMAGLVSNDGKFISTTEFFAGKGVF-EANPLVIEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 124/202 (61%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +      +  +++  +D++A+    +    I+++Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQNEIKDAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++WQ+LP      + + AEFVF
Sbjct: 774 EIWQHLPQT----ESARAEFVF 791


>gi|52425806|ref|YP_088943.1| isoleucyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81825491|sp|Q65RQ2.1|SYI_MANSM RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|52307858|gb|AAU38358.1| IleS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 938

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 192/479 (40%), Positives = 283/479 (59%), Gaps = 43/479 (8%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPY 160
           E+  YK+T++LP+T F MR +   REP + K W D+ ++ ++   + G+ +F+LHDGPPY
Sbjct: 7   EQKDYKNTLNLPETGFPMRGDLAKREPGMLKNWYDNDLYQKIRQSSKGKKSFILHDGPPY 66

Query: 161 ANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLT 220
           ANG++H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + ++
Sbjct: 67  ANGSIHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNQKIS 125

Query: 221 PSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYI 280
            ++ R +  K+A+  V+ Q   F R GV  DW+NPYLT++ + EA  I  FG+    G++
Sbjct: 126 AAQFREECRKYAREQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRAFGKAVANGHL 185

Query: 281 YRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFL------ 334
           Y+G KPVHW     ++LAEAE+EY E   S SIY  F    A    S + N+F+      
Sbjct: 186 YKGSKPVHWCLDCASSLAEAEVEY-EDRTSPSIYVRF----AAADESAVENKFVLTEQGK 240

Query: 335 PDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQK 394
             L   +WTTTPWT+P+N A+++N +L+Y +V+      GD                   
Sbjct: 241 GKLSAVIWTTTPWTLPSNKAISINPELEYQIVQF-----GDER----------------- 278

Query: 395 KVFIIVASDLVPTLEAKWGTK-LVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTE 453
               I+A++LV ++    G +      +  GSDLE  ++ HP  +   P ++ GD++T +
Sbjct: 279 ---FILAAELVESVAQAVGVESWKALGSAKGSDLELLQFKHPFYDYNVPFIL-GDHVTLD 334

Query: 454 SGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKY 513
            GTGLVHTAP HGQ+DYV + KY + +   + ++GKF   A  F+GL V  + N  V++ 
Sbjct: 335 GGTGLVHTAPDHGQDDYVVARKYNIGMAGLIGNDGKFNSNAKFFAGLGVF-EANGKVLEK 393

Query: 514 LDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           LDE  +L+  E   H YP+ WR K P IFRAT QWF  +E  G RQ A+  I +V+W+P
Sbjct: 394 LDEVGALLKLEKIRHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALSEIKKVRWIP 452



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 118/202 (58%), Gaps = 11/202 (5%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 602 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 659

Query: 610 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +      +   ++  +D++A+         I+E+Y++YQF  + 
Sbjct: 660 RRIRNTARFLLANLNGFDPKRDLVQAHEMISLDRWAVDCAFRAQAEIKEAYDNYQFHTVV 719

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + +F  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 720 QRLMKFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 779

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++W  LP       G   EFVF
Sbjct: 780 EIWGYLP-------GERGEFVF 794


>gi|424047859|ref|ZP_17785415.1| isoleucine--tRNA ligase [Vibrio cholerae HENC-03]
 gi|408883169|gb|EKM21956.1| isoleucine--tRNA ligase [Vibrio cholerae HENC-03]
          Length = 942

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 282/475 (59%), Gaps = 38/475 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W    ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLANREPEMLKRWYKEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q  SFKR G+  +W+ PY T+D   EA  I   G+++ +G++ +G 
Sbjct: 123 REKCREYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANIIRALGKIASKGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFR------MVSAPPSTSGLLNEFLPDLG 338
           KPVHW     +ALAEAE+EY +  VS SI   F+      ++S    T G  +E   D+ 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVRFKAADEAALLSKFELTEG--HEGHGDVS 239

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           + +WTTTPWT+PAN AV +   L+Y +++     EGD+A                    I
Sbjct: 240 IVIWTTTPWTLPANRAVCLRDDLEYVLIQT----EGDNAER------------------I 277

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           IVA++L   +  + G +       A G+DLE  ++ HP  +   P ++ GD++TT+SGTG
Sbjct: 278 IVAAELAKDVMDRAGIEHFHNLGFAKGADLELSQFQHPFYDFTVPAIL-GDHVTTDSGTG 336

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
           +VHTAPGHGQED+    KY L + +PV   G +  +   F+G  V    N AVV+ L E+
Sbjct: 337 VVHTAPGHGQEDFAVGNKYNLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVVEVLKEK 395

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            +L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+++I  V+W+P
Sbjct: 396 GALLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKNVEWMP 450



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 116/205 (56%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 601 VDGHGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 658

Query: 611 KLRGTLRYLLGNLHDWRVGNSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL  +     I   +++  +D++A+ +     + I ++YE Y    + Q
Sbjct: 659 RIRNTARFFLANLSGFNPETDIVPVEEMVALDRWAVGRALAAQEEIVKAYEEYNTHGVTQ 718

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 719 RLMQFCSIEMGSFYLDVIKDRQYTAKRGGNAQRSCQTALYYIVEALVRWMAPIMSFTADE 778

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 779 IWNEMP-------GQRDKFVFTGEW 796


>gi|167856258|ref|ZP_02478991.1| isoleucyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167852615|gb|EDS23896.1| isoleucyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 938

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 190/472 (40%), Positives = 282/472 (59%), Gaps = 37/472 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T F MR +   REP + + W D +++ ++ + + G+ +F+LHDGPPYANGN
Sbjct: 4   YKNTLNLPETGFPMRGDLAKREPAMLQNWHDKKLYQKIREASKGKRSFILHDGPPYANGN 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+N ILKDIIN+ K    +   YVPGWDCHGLPIELKV + L     ++++ ++ 
Sbjct: 64  IHLGHAVNHILKDIINKSKTAMGFDTPYVPGWDCHGLPIELKV-EGLVGKPNENISTAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++AK  V  Q A F R G+  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 123 RQKCREYAKEQVDGQKADFMRLGILGDWDNPYLTMNFDTEAHIIRTLGKVIANGHLYKGS 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLN---EFLPDLGLAV 341
           KPVHW     ++LAEAE+EY E  VS SIY  F  V  P +     N   +    +   +
Sbjct: 183 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFSAVD-PVAVEAKFNAQGKGSGQISAVI 240

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P+N A+A+N++L+Y +V+      GD                      +I+A
Sbjct: 241 WTTTPWTLPSNRAIALNSELEYQLVQF-----GDER--------------------VILA 275

Query: 402 SDLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           ++LV  ++   G + V +  +  G DLE  R+ HP  +   P ++ GD++TT+ GTGLVH
Sbjct: 276 TELVEAVQKATGVEQVEVLGSAKGCDLELMRFNHPFYDFSVPFIL-GDHVTTDGGTGLVH 334

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAP HG +DY+   KY L +   V ++GKF      F+G  V  + N  V++ L E  +L
Sbjct: 335 TAPDHGLDDYIVGQKYKLEMAGLVANDGKFISTTPFFAGKGVF-ESNDLVLEKLKETGTL 393

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           +  E  +H YP+ WR K P IFRAT QWF  +E  G R+ A+  I +V+W+P
Sbjct: 394 LKLERIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRKQALGEIKRVRWIP 445



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 104/174 (59%), Gaps = 6/174 (3%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS-ISYDD 636
           GAD+LRLWV+S DYTG++ +   +L    D YR++R T R+LL NL+ +      +  ++
Sbjct: 622 GADILRLWVASTDYTGEIAVSHNILNSAGDTYRRIRNTARFLLANLNGFDPKRDLVKPEE 681

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +D++A+    +   +I+E+Y++YQF  + Q + RF  +++ +FY D+ KDR YT   
Sbjct: 682 MIALDRWAVSCALDAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTKA 741

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVF 750
            S  RRSCQT L     ++V  +APIL   A+++W  LP     +    +EFVF
Sbjct: 742 DSLARRSCQTALWHISEALVHWMAPILSFTADEIWGYLP-----QVEGRSEFVF 790


>gi|424658550|ref|ZP_18095807.1| isoleucyl-tRNA synthetase [Vibrio cholerae HE-16]
 gi|408055034|gb|EKG89988.1| isoleucyl-tRNA synthetase [Vibrio cholerae HE-16]
          Length = 949

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 283/473 (59%), Gaps = 34/473 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR +   REPE+ + W    ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGDLAKREPEMLQRWYQEDLYGAIRQAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q  SFKR GV  +W+ PY T+D   EA  I   G+++  G++ +G 
Sbjct: 123 REKCREYAAGQVEGQKESFKRLGVLGEWDKPYRTMDFVTEANIIRALGKIADNGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMV--SAPPSTSGLL--NEFLPDLGLA 340
           KPVHW     +ALAEAE+EY +  VS SI   F+    +A  +  GL   +E   D+ + 
Sbjct: 183 KPVHWCTDCGSALAEAEVEY-KNKVSPSIDVRFKAADEAAVLAKFGLAAGHEGKGDVSIV 241

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AV + A L+Y +++++                       ++   IIV
Sbjct: 242 IWTTTPWTLPANRAVCLRADLEYVLIQVEG----------------------EQPERIIV 279

Query: 401 ASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           AS+L  ++  + G +       A G+DLE  ++ HP  +   P ++ GD++TT+SGTG+V
Sbjct: 280 ASELAKSVMDRAGIEHFHNLGFASGADLELAQFQHPFYSFTVPAIL-GDHVTTDSGTGVV 338

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHGQED+    +YGL + +PV   G +  +   F+G  V    N +V++ L E+ +
Sbjct: 339 HTAPGHGQEDFAVGQQYGLEVANPVGSNGVYLPDTELFAGQHVF-KANDSVLEVLKEKGA 397

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           L+    YEH YP+ WR K P IFRAT QWF S+E  G R+  ++AI  VKW+P
Sbjct: 398 LLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMEQAGLREQTLNAIKGVKWMP 450



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 120/206 (58%), Gaps = 7/206 (3%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V PQ+     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 602 VDGQGRKMSKSIGNV--VAPQDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 659

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL+ +    + I  +++  +D++A+ +     + I ++Y+ Y    + Q
Sbjct: 660 RIRNTARFFLANLNGFNPTTDIIPAEEMVALDRWAVGRALAAQQEIIQAYQDYNMHAVVQ 719

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 720 RLMNFCSIEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALFFIVEALVRWMAPIMSFTADE 779

Query: 730 VWQNLPFAYTLEDGSAAE-FVFESKW 754
           +W  +P      DGS  + FVF ++W
Sbjct: 780 IWNAMPAQQA--DGSPRDKFVFTNEW 803


>gi|343505209|ref|ZP_08742789.1| isoleucyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
 gi|342808397|gb|EGU43552.1| isoleucyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
          Length = 946

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 198/478 (41%), Positives = 283/478 (59%), Gaps = 39/478 (8%)

Query: 105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANG 163
            YK T++LP T F MR N   REPE+ + W    ++  +     G+ +FVLHDGPPYANG
Sbjct: 3   EYKDTLNLPDTGFPMRGNLANREPEMLERWYKEDLYGEIRKAKKGKKSFVLHDGPPYANG 62

Query: 164 NLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSK 223
           ++H+GHALNKILKDII + K L  +   YVPGWDCHGLPIEL V + + +  +K +T ++
Sbjct: 63  DIHIGHALNKILKDIIIKSKTLSGFDAPYVPGWDCHGLPIELMVEKKVGKPGQK-VTAAE 121

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R K  ++A   V+ Q  SFKR G+  +W+ PY T+D   EA  I   G+++ +G++ +G
Sbjct: 122 FREKCREYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFVTEANIIRALGKIADKGHLLKG 181

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF-LPD------ 336
            KPVHW     +ALAEAE+EY +  VS SI   F    A    + +L +F L D      
Sbjct: 182 FKPVHWCTDCGSALAEAEVEYKD-KVSPSIDVKF----AATDEAAVLAKFALADGHAGEG 236

Query: 337 -LGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKK 395
            L + +WTTTPWT+PAN AV +   L+YA++++    E +   PA +             
Sbjct: 237 ELSIVIWTTTPWTLPANCAVCLRDDLEYALIQV----EANGEQPAQR------------- 279

Query: 396 VFIIVASDLVPTLEAKWGTKLVIK-KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTES 454
             IIVAS+L      + G +       + G+DLE  ++ HP  +   P ++ GD++TTES
Sbjct: 280 --IIVASELAKDAMDRAGIEHFHNLGFVKGADLELLQFNHPFYDFTVPAIL-GDHVTTES 336

Query: 455 GTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYL 514
           GTG+VHTAPGHGQED+V   KYGL + +PV   G +  +   F+G  V    N +V++ L
Sbjct: 337 GTGVVHTAPGHGQEDFVVGQKYGLEVANPVGSNGVYLPDTPLFAGQHVF-KANDSVLEVL 395

Query: 515 DEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            E+ +L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+++I  V+W+P
Sbjct: 396 KEKGALLHHHAYEHSYPHCWRHKTPIIFRATPQWFISMDQAGLRAKALESIKGVQWMP 453



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 118/205 (57%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 605 VDGHGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 662

Query: 611 KLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL+ +    + +  +++  +D++A+ +     + I ++YE Y    + Q
Sbjct: 663 RIRNTARFFLANLNGFNPETDLVPAEEMVALDRWAVGRALAAQEEIVKAYEEYNTHGVTQ 722

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 723 RLMQFCSIEMGSFYLDVIKDRQYTAKRGGHAQRSCQTALYYIVEALVRWMAPIMSFTADE 782

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 783 IWNEMP-------GQRDKFVFTGEW 800


>gi|409913580|ref|YP_006892045.1| isoleucyl-tRNA synthetase [Geobacter sulfurreducens KN400]
 gi|298507162|gb|ADI85885.1| isoleucyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 923

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 201/472 (42%), Positives = 272/472 (57%), Gaps = 42/472 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP T F M+AN   REPEI   W    ++  +A    G+  +VLHDGPPYANG+
Sbjct: 3   YKSTLNLPVTDFPMKANLPQREPEILAAWQQGDLYGTIAKAGKGKPRYVLHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K +Q +   YVPGWDCHGLPIEL+V ++L    K + T  ++
Sbjct: 63  IHIGHALNKILKDIILKSKRMQGFDAPYVPGWDCHGLPIELQVEKNLG-SKKHETTKLQM 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  ++A+  V  Q A F+R GV  DW+ PYLT+  +YE        + +  G +Y+GK
Sbjct: 122 RKQCREYAEKFVHVQRAEFERLGVLGDWDRPYLTMSYDYEGITARELARFAENGGLYKGK 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMV----SAPPSTSGLLNEFLPDLGLA 340
           KPVHW  S  TALAEAE+EY +   S SIY  F +      A P+ +G        + L 
Sbjct: 182 KPVHWCSSCVTALAEAEVEYAD-KTSPSIYVKFLLQDDIGGAVPALAG------KRVSLV 234

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AVA++ +L Y  +E                   G VL        +V
Sbjct: 235 IWTTTPWTIPANLAVALHPELDYVALETG-----------------GEVL--------VV 269

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A  L     A  G +  +  T     L   R  HP  +R   +V+ G+++T ++GTG VH
Sbjct: 270 AEGLKDAFMAATGVQGDVIATFRADILYRKRCKHPFYDRD-SIVLLGEHVTLDAGTGCVH 328

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHGQEDY  +L  GL I +PVD+ G++ +    F G+ V  D N AV++ L E  +L
Sbjct: 329 TAPGHGQEDYELALAEGLDIYNPVDNRGRYIQSLEFFGGMFVF-DANAAVMEKLREVGAL 387

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           + +   EH YP+ WR KKP IFRATEQWF S+E    RQ A+  I +V WVP
Sbjct: 388 VGQGSVEHSYPHCWRCKKPIIFRATEQWFISMEKNDLRQKALTEIDRVSWVP 439



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 116/186 (62%), Gaps = 5/186 (2%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    ++G V  V P+E    YGA++LRLWV++ DY  DV I  ++L ++++ YR
Sbjct: 595 VDGSGRKMSKSVGNV--VAPEEVIKKYGAEILRLWVAAQDYRDDVRISQEILTRLAEAYR 652

Query: 611 KLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T RYLLGNL+D+    + + YD +  +D++AL QLE + + +  +Y  Y+F  ++ 
Sbjct: 653 RIRNTCRYLLGNLNDFDPDVDMVPYDRMTELDRWALHQLEVLKEKVAAAYNEYEFHILYH 712

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  V++S FY D+ K+R YT    +  RRS Q+V+   L S+V ++AP+L   A++
Sbjct: 713 AVNGFCTVEMSAFYLDIIKER-YTSRKDAPERRSAQSVMYLVLESLVTLMAPVLSFTADE 771

Query: 730 VWQNLP 735
           VW  +P
Sbjct: 772 VWGYMP 777


>gi|269962529|ref|ZP_06176877.1| isoleucyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269832724|gb|EEZ86835.1| isoleucyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 942

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 282/475 (59%), Gaps = 38/475 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W    ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLANREPEMLKRWYKEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q  SFKR G+  +W+ PY T+D   EA  I   G+++ +G++ +G 
Sbjct: 123 REKCREYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANIIRALGKIASKGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFR------MVSAPPSTSGLLNEFLPDLG 338
           KPVHW     +ALAEAE+EY +  VS SI   F+      ++S    T G  +E   D+ 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVRFKAADEAALLSKFELTEG--HEGHGDVS 239

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           + +WTTTPWT+PAN AV +   L+Y +++     EGD+A                    I
Sbjct: 240 IVIWTTTPWTLPANRAVCLRDDLEYVLIQT----EGDNAER------------------I 277

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           IVA++L   +  + G +       A G+DLE  ++ HP  +   P ++ GD++TT+SGTG
Sbjct: 278 IVAAELAKDVMDRAGIEHFHNLGFAKGADLELSQFQHPFYDFTVPAIL-GDHVTTDSGTG 336

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
           +VHTAPGHGQED+    KY L + +PV   G +  +   F+G  V    N AVV+ L E+
Sbjct: 337 VVHTAPGHGQEDFAVGNKYNLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVVEVLKEK 395

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            +L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+++I  V+W+P
Sbjct: 396 GALLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKNVEWMP 450



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 116/205 (56%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 601 VDGHGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 658

Query: 611 KLRGTLRYLLGNLHDWRVGNSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL  +     I   +++  +D++A+ +     + I ++YE Y    + Q
Sbjct: 659 RIRNTARFFLANLSGFNPETDIVPVEEMVALDRWAVGRALAAQEEIVKAYEEYNTHGVTQ 718

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 719 RLMQFCSIEMGSFYLDVIKDRQYTAKRGGNAQRSCQTALYYIVEALVRWMAPIMSFTADE 778

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 779 IWNEMP-------GQRDKFVFTGEW 796


>gi|417843227|ref|ZP_12489304.1| Isoleucyl-tRNA synthetase [Haemophilus haemolyticus M21127]
 gi|341950461|gb|EGT77050.1| Isoleucyl-tRNA synthetase [Haemophilus haemolyticus M21127]
          Length = 941

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 193/471 (40%), Positives = 284/471 (60%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T+F MR +   REP++ K W +  ++ ++ + + G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETSFPMRGDLAKREPDMLKNWYEKNLYQKIREASKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + +T ++ 
Sbjct: 65  IHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKITAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIANGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLL--NEFLPDLGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F   SA    +      +    L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPAESADEIEAKFAAQGKGHGKLSAVIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVN+ L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNSDLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + V I  ++ G  LE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGIEQVEILGSVKGQALELVRFNHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++ S +Y +P+   V ++GKF      F+G  V  + N  VV+ L E  +L+
Sbjct: 337 APDHGLDDFIVSKQYNIPMAGLVGNDGKFISTTEFFAGKGVF-EANPLVVEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 125/202 (61%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +      +  +D+  +D++A+    +  K I+E+Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPKRDLVKPEDMISLDRWAVACALDAQKEIKEAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++WQ+LP     E G  AEFVF
Sbjct: 774 EIWQHLP---QTESGR-AEFVF 791


>gi|116182640|ref|XP_001221169.1| hypothetical protein CHGG_01948 [Chaetomium globosum CBS 148.51]
 gi|88186245|gb|EAQ93713.1| hypothetical protein CHGG_01948 [Chaetomium globosum CBS 148.51]
          Length = 947

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 276/469 (58%), Gaps = 37/469 (7%)

Query: 109 TVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMG 168
           T+ LPK+TF  R      E  I +  DD   + ++A++   + FVLHDGPPYANG+LH G
Sbjct: 8   TLRLPKSTFPPRPRPKSWERYIQQCADDFYKW-QLANRPADDEFVLHDGPPYANGSLHAG 66

Query: 169 HALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKA 228
           HALNKILKDII R K+ Q  +V Y+PGWDCHGLPIELK   ++D  A K ++   +R  A
Sbjct: 67  HALNKILKDIILRVKVQQGRRVSYIPGWDCHGLPIELK---AVDAAAGKRMSAGAIRKAA 123

Query: 229 AKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVH 288
            K A  TV  QM SF+ Y V ADW+  + T+D  YE  Q+ +F QM+ +G +YR  KPV+
Sbjct: 124 RKLAAKTVVDQMKSFRTYAVMADWDARWTTMDTAYEIRQLRLFRQMARRGLVYRKFKPVY 183

Query: 289 WSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWT 348
           WSPSS TALAEAELEY + HVS++ Y  F +V       G L  F   L   +WTTTPWT
Sbjct: 184 WSPSSGTALAEAELEYNDAHVSKAAYIRFPVVGGYEDLPG-LEGFGGRLFAVIWTTTPWT 242

Query: 349 VPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTL 408
           +PAN A+AV+  L Y +V++ +    D+   A       N L+   K+F           
Sbjct: 243 LPANRAIAVHEDLAYHIVKVGA----DAFLVAE------NCLERIAKLF----------- 281

Query: 409 EAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCP--VVIGGDYITTESGTGLVHTAPGHG 466
               G    I  T+ GS L   RY++ +  +       + G ++T  SG+GLVH APGHG
Sbjct: 282 --GEGAVFEIVGTVKGSQLTQLRYLNVLRGKSAEPQPFMHGSFVTDGSGSGLVHCAPGHG 339

Query: 467 QEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDEQMSLI 521
            +DY+  L  G+ + +PVD++G FTEEA      +  G+ VL  G+ AV+  L + +  +
Sbjct: 340 FDDYLACLSLGISVSAPVDNDGLFTEEAFPDHPHRLKGISVLDGGSDAVLNILGDDVLDV 399

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
               Y+HKYPYDWRTKKP I RAT QWFA V   +  A+ A GQV++VP
Sbjct: 400 HN--YQHKYPYDWRTKKPIIIRATAQWFADVGTIKDDALGATGQVQFVP 446



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 15/193 (7%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDL 637
           G D LRLWV+S DYT D+++G  VL  +     K R T++ L G++H      S     L
Sbjct: 650 GPDALRLWVASSDYTRDIVLGEPVLTTIHQALLKYRITIKMLTGSMH-----PSACTAPL 704

Query: 638 PMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTT 697
             +DQ AL QL +++  +   Y++++F K F  + R++  DLS FY +  KDRLY     
Sbjct: 705 TTLDQIALLQLGDVMAEVGRHYDAHEFNKAFNALNRWLTNDLSAFYLEALKDRLYCADGG 764

Query: 698 SFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE-SKWPV 756
                    VL      ++R++API P L E+ W++ P  +  ED +    + +    P+
Sbjct: 765 G--------VLEPLFFGLLRMLAPITPVLVEEAWEHRP-QWLKEDETVVHPLHQLYDAPL 815

Query: 757 LDEKWRTFPVGEI 769
           +DE  RT   G +
Sbjct: 816 VDEGRRTVAEGAL 828


>gi|392307924|ref|ZP_10270458.1| isoleucyl-tRNA ligase [Pseudoalteromonas citrea NCIMB 1889]
          Length = 941

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 188/474 (39%), Positives = 281/474 (59%), Gaps = 35/474 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGEN-FVLHDGPPYANGN 164
           YKHT++LP+T F MR N   REP++ K W +  ++ ++     G+  F+LHDGPPYANG+
Sbjct: 4   YKHTLNLPETEFPMRGNLAQREPKMLKTWYEQDLYGQIRSAKKGKKPFILHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GH++NKILKDII + K L ++   YVPGWDCHGLPIEL+V +       K +T ++ 
Sbjct: 64  IHLGHSVNKILKDIIIKSKTLSDFDAPYVPGWDCHGLPIELQV-EKKVGKPGKKVTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K   +A+  V+ Q A FKR GV+ DW+ PYLT++ ++EA  I V G++   G++++G 
Sbjct: 123 REKCRAYAQKQVEGQKADFKRLGVFGDWDKPYLTMNFDFEANAIRVLGRIIKSGHLHKGA 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL----LNEFLPDLGLA 340
           KPVHW     +ALAEAE+EY +   S +I   F  V      +       ++    +G  
Sbjct: 183 KPVHWCTDCGSALAEAEVEYQDKQ-SPAIDVKFDFVDQAAVVAAFDLAEGHQGEGSVGTV 241

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKV-FII 399
           +WTTTPWT+PAN AVAV+  L+YA+V+++                      D+ KV  +I
Sbjct: 242 IWTTTPWTLPANRAVAVHEALEYALVQVE----------------------DEGKVQRLI 279

Query: 400 VASDLVPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           + S+LV     ++G     +   + G  +EN R  HP  +   PV++  +++TTESGTG+
Sbjct: 280 LGSELVKDAMDRFGFNHFHVLGYVKGQAIENLRVAHPFYDFDVPVIL-AEHVTTESGTGV 338

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQM 518
           VHTAPGHGQED+   L YGL + +PV   G +  +   F G  V    N +V++ L E+ 
Sbjct: 339 VHTAPGHGQEDFSAGLAYGLEVANPVGANGVYFPDTPLFGGQHVF-KANASVIEVLTEKG 397

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           +L+     +H YP+ WR K P IFRAT QWF S++    RQ +++ I + +W+P
Sbjct: 398 ALMHHHALQHSYPHCWRHKTPIIFRATPQWFVSMDQANLRQDSLNEIAKTQWLP 451



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 105/178 (58%), Gaps = 8/178 (4%)

Query: 578 GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYDD 636
           GAD+LRLWV+S DYT ++ +  ++ ++ +D YR++R T RYLL NL  +    + ++ DD
Sbjct: 626 GADILRLWVASTDYTAEMTVSDEIFKRSADRYRRIRNTSRYLLSNLSGFNPATDLVAVDD 685

Query: 637 LPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGT 696
           +  +D++ + +   +   I E+Y++YQ   + Q +  F   +L +FY DV KDR YT  +
Sbjct: 686 MVELDRWIVSRAAQLQTEILEAYDNYQMLVVTQKLMNFCTGELGSFYLDVIKDRQYTAKS 745

Query: 697 TSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKW 754
            S  RRSCQ+ L     ++ R +API+   A+++WQ LP       G  +EFVF   W
Sbjct: 746 DSHARRSCQSALYHIAEAMTRWMAPIMSFTAQEIWQALP-------GERSEFVFTDVW 796


>gi|229843977|ref|ZP_04464118.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229812971|gb|EEP48659.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 941

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 192/471 (40%), Positives = 284/471 (60%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T+F MR +   REP++ K W +  ++ ++   + G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETSFPMRGDLAKREPDMLKNWYEKNLYQKIRKASKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + ++ ++ 
Sbjct: 65  IHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKISAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYASEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIENGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD--LGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F   SA    +    +      L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPAESADEIEAKFSAQGRGQGKLSAVIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + + I  ++ G+DLE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGIEHIEILGSVKGADLELSRFHHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++   +Y LP+   V ++GKF      F+G  V  + N  V++ L E  +L+
Sbjct: 337 APDHGLDDFIVGKQYDLPMAGLVSNDGKFISTTEFFAGKGVF-EANPLVIEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 125/202 (61%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +      +  +D+  +D++A+    +    I+++Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPKRDLVKPEDMISLDRWAVACALDAQNEIKDAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    SF RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSFARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++WQ+LP      + + AEFVF
Sbjct: 774 EIWQHLPQT----ESARAEFVF 791


>gi|145638215|ref|ZP_01793825.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145272544|gb|EDK12451.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309751370|gb|ADO81354.1| Isoleucyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 941

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 194/471 (41%), Positives = 284/471 (60%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T+F MR +   REP++ K W +  ++ ++   + G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETSFPMRGDLAKREPDMLKNWYEKNLYQKIRKASKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + ++ ++ 
Sbjct: 65  IHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKISAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIENGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD--LGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F   SA    +    +      L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPAESADEIEAKFSAQGRGQGKLSAIIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLV-PTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV P  +A    ++ I  ++ G+DLE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVEPVAKAVGVEQVKILGSVKGADLELSRFHHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D+V   +Y LP+   V ++GKF      F+G  V  + N  V++ L E  +L+
Sbjct: 337 APDHGLDDFVVGKQYDLPMAGLVSNDGKFISTTEFFAGKGVF-EANPLVIEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 124/202 (61%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +      +  +++  +D++A+    +    I+++Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQNEIKDAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++WQ+LP      + + AEFVF
Sbjct: 774 EIWQHLPQT----ESARAEFVF 791


>gi|118581995|ref|YP_903245.1| isoleucyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118504705|gb|ABL01188.1| Isoleucyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 924

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 194/473 (41%), Positives = 272/473 (57%), Gaps = 44/473 (9%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRV-ADKNDGENFVLHDGPPYANGN 164
           YK T++LP+T F M+AN   REPE    W+++ ++  + A   D   FVLHDGPPYANG+
Sbjct: 3   YKDTLNLPQTGFPMKANLPQREPETLAAWEENDLYSAMEAAGKDRPLFVLHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNK+LKDI+ + K ++ +   YVPGWDCHGLPIEL+V ++L    K  ++  ++
Sbjct: 63  IHIGHALNKVLKDIVLKVKRMEGFHAPYVPGWDCHGLPIELQVEKNLGSK-KHQISKLEM 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    ++A   V  Q   FKR G+  DW NPYLT+  EYE        + +  G +YRG+
Sbjct: 122 RRLCREYAAKFVAIQRDEFKRLGIQGDWENPYLTMKYEYEGRTAAELAKFAHNGGLYRGR 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLG-----L 339
           KPVHW  S  TALAEAE+EY + H S SI+  F +V    +T       +P L      +
Sbjct: 182 KPVHWCSSCVTALAEAEVEYAD-HSSPSIHVRFPLVDDVSAT-------IPALAGRQAYV 233

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN A+A++ +  Y  +E +                         +  +I
Sbjct: 234 VIWTTTPWTIPANLAIAMHPEYDYVALETE-------------------------QGVLI 268

Query: 400 VASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLV 459
           VA  L  +  A+ G    +  T + + LE  R  HP  +R   +++ G+++T E+GTG V
Sbjct: 269 VAEGLKESFLAETGLSGQVIATFSATALERKRCKHPFYDRD-SIILLGEHVTLEAGTGCV 327

Query: 460 HTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMS 519
           HTAPGHGQEDY   LK GL I +PVD+ GK+      F G  V    N +V+  L E  +
Sbjct: 328 HTAPGHGQEDYELGLKEGLEIYNPVDNHGKYLSTVEFFGGQQVFS-ANQSVIDKLTEVGA 386

Query: 520 LIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEG--FRQAAMDAIGQVKWVP 570
           L+      H YP+ WR KKP IFRATEQWF S++    R  A++AIGQV+W+P
Sbjct: 387 LLKTSTISHSYPHCWRCKKPIIFRATEQWFISMKSNDLRAKALEAIGQVQWIP 439



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 117/187 (62%), Gaps = 8/187 (4%)

Query: 577 YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWR-VGNSISYD 635
           +GAD+LRLWV++ DY  D  I  ++L ++++ YR++R T RY+LGN+ D+     ++ + 
Sbjct: 619 FGADILRLWVAAQDYRDDNRISQEILTRVAEAYRRIRNTCRYILGNISDFNPETQTVPFA 678

Query: 636 DLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGG 695
           D+P ID++AL QLE + + +  +Y  Y+F  I+Q +  F  V++S FY D+ KDR+YT  
Sbjct: 679 DMPEIDRWALHQLELLKERVLNAYRDYEFHVIYQDVTSFCSVEMSAFYLDILKDRMYTSR 738

Query: 696 TTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWP 755
             S  R S QTV+   L ++VR++AP+L   +E+VW+ +P         A E V  + +P
Sbjct: 739 AGSLERLSAQTVMYRILDTLVRLLAPVLSFTSEEVWRYMP-------ARAEESVHLASFP 791

Query: 756 VLDEKWR 762
            L+ +WR
Sbjct: 792 TLNPEWR 798


>gi|269966608|ref|ZP_06180689.1| isoleucyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269828793|gb|EEZ83046.1| isoleucyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 942

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 281/475 (59%), Gaps = 38/475 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W    ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLANREPEMLKRWYKEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q  SFKR G+  +W+ PY T+D   EA  I   G+++  G++ +G 
Sbjct: 123 REKCREYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANIIRALGKIASNGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFR------MVSAPPSTSGLLNEFLPDLG 338
           KPVHW     +ALAEAE+EY +  VS SI   F+      ++S    T G  +E   D+ 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVRFKAADEAALLSKFELTEG--HEGHGDVS 239

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           + +WTTTPWT+PAN AV +   L+Y +++     EGD+A                    I
Sbjct: 240 IVIWTTTPWTLPANRAVCLRDDLEYVLIQT----EGDNAER------------------I 277

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           IVA++L   +  + G +       A G+DLE  ++ HP  +   P ++ GD++TT+SGTG
Sbjct: 278 IVAAELAKDVMDRAGIEHFHNLGFAKGADLELSQFQHPFYDFTVPAIL-GDHVTTDSGTG 336

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
           +VHTAPGHGQED+    KY L + +PV   G +  +   F+G  V    N AVV+ L E+
Sbjct: 337 VVHTAPGHGQEDFAVGNKYNLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVVEVLKEK 395

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
            +L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+++I  V+W+P
Sbjct: 396 GALLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKNVEWMP 450



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 116/205 (56%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 601 VDGQGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 658

Query: 611 KLRGTLRYLLGNLHDWRVGNSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL  +     I   +++  +D++A+ +     + I ++YE Y    + Q
Sbjct: 659 RIRNTARFFLANLSGFNPETDIVPVEEMVALDRWAVGRALAAQEEIVKAYEEYNTHGVTQ 718

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 719 RLMQFCSIEMGSFYLDVIKDRQYTAKRGGNAQRSCQTALYYIVEALVRWMAPIMSFTADE 778

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 779 IWNEMP-------GERDKFVFTGEW 796


>gi|424032071|ref|ZP_17771492.1| isoleucine--tRNA ligase [Vibrio cholerae HENC-01]
 gi|408876483|gb|EKM15600.1| isoleucine--tRNA ligase [Vibrio cholerae HENC-01]
          Length = 942

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 281/475 (59%), Gaps = 38/475 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP+T F MR N   REPE+ K W    ++  +     G+ +FVLHDGPPYANG+
Sbjct: 4   YKDTLNLPETGFPMRGNLANREPEMLKRWYKEDLYGEIRKAKKGKKSFVLHDGPPYANGD 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K L  +   Y+PGWDCHGLPIEL V + + +  +K +T ++ 
Sbjct: 64  IHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQK-VTAAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q  SFKR G+  +W+ PY T+D   EA  I   G+++ +G++ +G 
Sbjct: 123 REKCREYAAGQVEGQKESFKRLGIMGEWDKPYRTMDFATEANIIRALGKIASKGHLLKGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFR------MVSAPPSTSGLLNEFLPDLG 338
           KPVHW     +ALAEAE+EY +  VS SI   F+      ++S    T G  +E   D+ 
Sbjct: 183 KPVHWCTDCGSALAEAEVEYKD-KVSPSIDVRFKAADEAALLSKFELTEG--HEGQGDVS 239

Query: 339 LAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFI 398
           + +WTTTPWT+PAN AV +   L+Y +++     EGD+A                    I
Sbjct: 240 IVIWTTTPWTLPANRAVCLRDDLEYVLIQT----EGDNAER------------------I 277

Query: 399 IVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTG 457
           IVA++L   +  + G +       A G+DLE  ++ HP  +   P ++ GD++TT+SGTG
Sbjct: 278 IVAAELAKDVMDRAGIEHFHNLGFAKGADLELSQFQHPFYDFTVPAIL-GDHVTTDSGTG 336

Query: 458 LVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQ 517
           +VHTAPGHGQED+    KY L + +PV   G +  +   F+G  V    N AVV+ L E+
Sbjct: 337 VVHTAPGHGQEDFAVGNKYNLEVANPVGSNGVYLPDTELFAGQHVF-KANDAVVEVLKEK 395

Query: 518 MSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             L+    YEH YP+ WR K P IFRAT QWF S++  G R  A+++I  V+W+P
Sbjct: 396 GVLLHHHAYEHSYPHCWRHKTPIIFRATPQWFVSMDQAGLRAKALESIKNVEWMP 450



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 116/205 (56%), Gaps = 11/205 (5%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    +IG V  V P++     GAD+LRLWV+S DYTG+V +  ++L++ +D YR
Sbjct: 601 VDGHGRKMSKSIGNV--VAPKDVTNKLGADILRLWVASTDYTGEVAVSDEILKRSADAYR 658

Query: 611 KLRGTLRYLLGNLHDWRVGNSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T R+ L NL  +     I   +++  +D++A+ +     + I ++YE Y    + Q
Sbjct: 659 RIRNTARFFLANLSGFNPETDIVPVEEMVALDRWAVGRALAAQEEIVKAYEEYNTHGVTQ 718

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            + +F  +++ +FY DV KDR YT       +RSCQT L   + ++VR +API+   A++
Sbjct: 719 RLMQFCSIEMGSFYLDVIKDRQYTAKRGGNAQRSCQTALYYIVEALVRWMAPIMSFTADE 778

Query: 730 VWQNLPFAYTLEDGSAAEFVFESKW 754
           +W  +P       G   +FVF  +W
Sbjct: 779 IWNEMP-------GERDKFVFTGEW 796


>gi|39998226|ref|NP_954177.1| isoleucyl-tRNA ligase [Geobacter sulfurreducens PCA]
 gi|81701102|sp|Q747X9.1|SYI_GEOSL RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|39985172|gb|AAR36527.1| isoleucyl-tRNA synthetase [Geobacter sulfurreducens PCA]
          Length = 923

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 201/472 (42%), Positives = 272/472 (57%), Gaps = 42/472 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK T++LP T F M+AN   REPEI   W    ++  +A    G+  +VLHDGPPYANG+
Sbjct: 3   YKSTLNLPVTDFPMKANLPQREPEILAAWQQGDLYGTIAKAGKGKPRYVLHDGPPYANGH 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHALNKILKDII + K +Q +   YVPGWDCHGLPIEL+V ++L    K + T  ++
Sbjct: 63  IHIGHALNKILKDIILKSKRMQGFDAPYVPGWDCHGLPIELQVEKNLG-SKKHETTKLQM 121

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R +  ++A+  V  Q A F+R GV  DW+ PYLT+  +YE        + +  G +Y+GK
Sbjct: 122 RKQCREYAEKFVHVQRAEFERLGVLGDWDRPYLTMSYDYEGITARELARFAENGGLYKGK 181

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMV----SAPPSTSGLLNEFLPDLGLA 340
           KPVHW  S  TALAEAE+EY +   S SIY  F +      A P+ +G        + L 
Sbjct: 182 KPVHWCSSCVTALAEAEVEYAD-KTSPSIYVKFLLQDDIGGAVPALAG------KRVSLV 234

Query: 341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIV 400
           +WTTTPWT+PAN AVA++ +L Y  +E                   G VL        +V
Sbjct: 235 IWTTTPWTIPANLAVALHPELDYVALETG-----------------GEVL--------VV 269

Query: 401 ASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVH 460
           A  L     A  G +  +  T     L   R  HP  +R   +V+ G+++T ++GTG VH
Sbjct: 270 AEGLKDAFMAATGVQGDVIATFRADILYRKRCKHPFYDRD-SIVLLGEHVTLDAGTGCVH 328

Query: 461 TAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSL 520
           TAPGHGQEDY  +L  GL I +PVD+ G++ +    F G+ V  D N AV++ L E  +L
Sbjct: 329 TAPGHGQEDYELALVEGLDIYNPVDNRGRYIQSLEFFGGMFVF-DANAAVMEKLREVGAL 387

Query: 521 IMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           + +   EH YP+ WR KKP IFRATEQWF S+E    RQ A+  I +V WVP
Sbjct: 388 VGQGSVEHSYPHCWRCKKPIIFRATEQWFISMEKNDLRQKALTEIDRVSWVP 439



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 116/186 (62%), Gaps = 5/186 (2%)

Query: 552 VEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYR 610
           V+G  +    ++G V  V P+E    YGA++LRLWV++ DY  DV I  ++L ++++ YR
Sbjct: 595 VDGSGRKMSKSVGNV--VAPEEVIKKYGAEILRLWVAAQDYRDDVRISQEILTRLAEAYR 652

Query: 611 KLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQ 669
           ++R T RYLLGNL+D+    + + YD +  +D++AL QLE + + +  +Y  Y+F  ++ 
Sbjct: 653 RIRNTCRYLLGNLNDFDPDVDMVPYDRMTELDRWALHQLEVLKEKVAAAYNEYEFHILYH 712

Query: 670 IIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAED 729
            +  F  V++S FY D+ K+R YT    +  RRS Q+V+   L S+V ++AP+L   A++
Sbjct: 713 AVNGFCTVEMSAFYLDIIKER-YTSRKDAPERRSAQSVMYLVLESLVTLMAPVLSFTADE 771

Query: 730 VWQNLP 735
           VW  +P
Sbjct: 772 VWGYMP 777


>gi|406903225|gb|EKD45371.1| hypothetical protein ACD_69C00320G0004, partial [uncultured
           bacterium]
          Length = 942

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 205/525 (39%), Positives = 297/525 (56%), Gaps = 59/525 (11%)

Query: 108 HTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLR-VADKNDGENFVLHDGPPYANGNLH 166
           + V+LP+T+F M+A+   REP++ + W    ++   V+ KN    F++HDGPPYANG++H
Sbjct: 4   YNVNLPQTSFPMKADLPKREPKMLEFWQTINLYQSFVSPKNARGKFIVHDGPPYANGDIH 63

Query: 167 MGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRA 226
           +GHA NKILKDIIN+ KLL+ Y V YVPGWDCHGLP EL V + + + A   +   K   
Sbjct: 64  LGHAFNKILKDIINKTKLLEGYSVPYVPGWDCHGLPSELNVEKKIGK-ANVKVPVEKFIT 122

Query: 227 KAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKP 286
           +  K+A   ++ Q+ +FKR GV  DW N Y T+D +YEA  +     +   GY+ RG KP
Sbjct: 123 ECRKYAAEQIQIQIKAFKRLGVIGDWENFYSTMDFKYEADIVRALLGIIEAGYVIRGYKP 182

Query: 287 VHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEF-LPDLGLAVWTTT 345
           VHW  +  +ALAEAE+EY +  VS +I   FR+V++        ++F + +L + +WTTT
Sbjct: 183 VHWCIACGSALAEAEVEYKDK-VSPAIDVKFRVVNS--------DKFKVENLSIPIWTTT 233

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN AV ++ KL+YA+V   +L E                         I A DL+
Sbjct: 234 PWTLPANEAVCLHPKLKYALVHCITLNE-----------------------HFIFAEDLL 270

Query: 406 PTLEAKWG-TKLVIKKTLAGSDLENCRYVHP-VDNRQCPVVIGGDYITTESGTGLVHTAP 463
             +  ++G T+  I+K   G +L+     HP +D++  PV++ G+++T + GTG VHTAP
Sbjct: 271 EQVMQRYGETEYRIEKVYVGEELQGLMLKHPFLDDKTVPVIL-GEHVTFDVGTGAVHTAP 329

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
            HGQEDY   L Y LPI +PV   GKF      F+GL+V  D N  V+  L E  +LI  
Sbjct: 330 AHGQEDYKIGLHYKLPINNPVGSNGKFLSSTKFFAGLNVF-DANEQVITVLKEFGNLIHA 388

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVE-------GFRQAAMDAIGQVKWVPPQ---- 572
           +  EH YP+ WR K P IFRAT+QWF S++         RQ   DAI +V W+P Q    
Sbjct: 389 KTLEHSYPHCWRHKTPLIFRATQQWFVSMDFAPKHKPTLRQMGQDAIEKVNWIPIQGKNS 448

Query: 573 ------EAPGYGADVLRLW---VSSVDYTGDVMIGPQVLRQMSDI 608
                 + P +     R W   ++   +     I PQ+ R ++D+
Sbjct: 449 IKSMIEQRPDWCISRQRFWGIPMTLFIHKESGEIHPQMQRLVNDV 493



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/187 (40%), Positives = 108/187 (57%), Gaps = 2/187 (1%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P Q    YGADVLRLW +S     D+ +  ++L +  D+YR LR T R+LLGNL D+   
Sbjct: 615 PKQVVDKYGADVLRLWSASSYLHDDLAVSEEILARTIDVYRILRNTARFLLGNLSDFNPK 674

Query: 630 NSI-SYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAK 688
           + +   + +  +D+ A+ Q+ N+  N R+ Y  YQF  +   +Q  +  D+S+FYF + K
Sbjct: 675 HDLMPSEKMLSLDRLAVAQILNLANNSRDHYNLYQFHVVCNNLQGLLTNDISSFYFSIIK 734

Query: 689 DRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQN-LPFAYTLEDGSAAE 747
           DRLYT    S  RRS QT L   L  +VR+IAPIL   AE++WQ  L    T E  S AE
Sbjct: 735 DRLYTMSQASLGRRSAQTALFHILEILVRLIAPILSFTAEEIWQEMLVMDKTHEITSRAE 794

Query: 748 FVFESKW 754
            VF +++
Sbjct: 795 SVFMTRF 801


>gi|260580052|ref|ZP_05847882.1| isoleucyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|260093336|gb|EEW77269.1| isoleucyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 941

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 192/471 (40%), Positives = 283/471 (60%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T+F MR +   REP++ K W +  ++ ++   + G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETSFPMRGDLAKREPDMLKNWYEKNLYQKIRKASKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + ++ ++ 
Sbjct: 65  IHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKISAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIENGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD--LGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F   SA    +    +      L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPAESADEIEAKFSAQGRGQGKLSAIIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + + I  ++ G DLE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGIEHIEILGSVKGDDLELSRFHHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++   +Y LP+   V ++GKF      F+G  V  + N  V++ L E  +L+
Sbjct: 337 APDHGLDDFIVGKQYDLPMAGLVSNDGKFISTTEFFAGKGVF-EANPLVIEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 123/202 (60%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +      +  + +  +D++A+    +    I+++Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPKRDLVKPEKMISLDRWAVACALDAQNEIKDAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++WQ+LP      + + AEFVF
Sbjct: 774 EIWQHLPQT----ESARAEFVF 791


>gi|336463905|gb|EGO52145.1| hypothetical protein NEUTE1DRAFT_125685 [Neurospora tetrasperma
           FGSC 2508]
          Length = 962

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 201/474 (42%), Positives = 275/474 (58%), Gaps = 40/474 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LPK+T   R      +  I K  DD   + + A++   + F+LHDGPPYANG+L
Sbjct: 5   WSSTLRLPKSTLPPRPLPTQHKEYIKKCADDFYKW-QAANRPADDTFLLHDGPPYANGSL 63

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H GHALNKILKDII R K+ Q  +V YVPGWDCHGLPIELK + +   +  + +TP  +R
Sbjct: 64  HAGHALNKILKDIIIRTKVQQGQRVTYVPGWDCHGLPIELKAVST---EEGRTMTPHAIR 120

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
             A   A  TV  QM SF+ Y V +DW N + T+D  +E  Q+ +F +M  +G IYR  K
Sbjct: 121 QAARSLAAKTVLEQMDSFRTYAVMSDWENRWTTMDMAFEINQLRLFQKMVSRGLIYRKFK 180

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PV+WSPSS TALAEAELEY E H+S+S Y  F +        G L  F  +L   +WTTT
Sbjct: 181 PVYWSPSSGTALAEAELEYNEAHISKSAYVRFPITKDSARIPG-LEGFTGNLYAVIWTTT 239

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSA--APANKKSRPGNVLKDQKKVFIIVASD 403
           PWT+PAN A+AV+  L Y  V +     GD A         R   VL  ++    I+A  
Sbjct: 240 PWTLPANRAIAVHDDLLYHAVRV-----GDDAYLVADGGLERVAKVLMGEEGTPEILA-- 292

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCP--VVIGGDYITTESGTGLVHT 461
                            T+ GS L   +YV+P+  +       I G ++T +SG+GLVH 
Sbjct: 293 -----------------TVPGSQLTQLQYVNPLQGKSAAPQPFIHGPFVTPDSGSGLVHC 335

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEA-----GKFSGLDVLGDGNVAVVKYLDE 516
           APGHG +DY+     G+P+ +PVD++G FTEEA      +  G+ VL  G+ AV++   +
Sbjct: 336 APGHGFDDYLLCKDLGIPVSAPVDNDGIFTEEAYPDDPSRLKGIPVLEGGSAAVLELFKD 395

Query: 517 QMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
            +  + +  Y+HKYPYDWRTKKP I RAT QWFA V+  ++ A+ A+ +VK+VP
Sbjct: 396 NVLNVHK--YKHKYPYDWRTKKPIIIRATAQWFADVDNIKELALKALEEVKFVP 447



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 92/175 (52%), Gaps = 16/175 (9%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           PP++A   G D LRLWV+S DYT D+++G  VL+ +     K R  ++ L G++      
Sbjct: 649 PPKDA--LGPDALRLWVASSDYTSDIVLGEPVLKTIHQSLTKYRTIIKMLTGSME----- 701

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
            S     L  +D  AL QL++ +  I   Y++Y+F K F  + R+I  DLS FY +  KD
Sbjct: 702 QSARAAPLTALDHIALVQLKDAMAEIERHYQNYEFNKAFSSLNRWIANDLSAFYLEALKD 761

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGS 744
           RLY              VL    +  +R++API P L E+ W++ P A+  ED S
Sbjct: 762 RLYCADGGG--------VLEPIFMGFLRMLAPITPVLVEEAWEHRP-AWMKEDPS 807


>gi|320585805|gb|EFW98484.1| isoleucyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 979

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 201/477 (42%), Positives = 275/477 (57%), Gaps = 38/477 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           +  T+ LP++TF  R     R   + +  DD   + + A +     FV+HDGPPYANG L
Sbjct: 5   WASTLRLPRSTFPPRPLPERRPVYLQRSADDLYRW-QEAHRPAHRPFVVHDGPPYANGTL 63

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLR 225
           H+GHALNKILKD+  R +L Q  +VRYVPGWDCHGLPIELK L +         +P  +R
Sbjct: 64  HVGHALNKILKDMSLRVQLQQGRRVRYVPGWDCHGLPIELKALAAFPASP----SPVAIR 119

Query: 226 AKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKK 285
             A   A  TV  QM  F+R+GV ADW+  + T+D  YE  Q+ +F Q+  +G IYR  K
Sbjct: 120 KAARDLAARTVLEQMREFRRFGVMADWDGRWRTMDAAYEVRQLRLFQQLVHKGLIYRRYK 179

Query: 286 PVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTT 345
           PV+WSPSSRTALAEAELEY + H+S + +  F +V        L       L   +WTTT
Sbjct: 180 PVYWSPSSRTALAEAELEYSDRHLSTAAFVQFPIVGGVGRLDCLAGLRPGPLSAVIWTTT 239

Query: 346 PWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLV 405
           PWT+PAN A+AV+  L YAVV I++     S AP                 +++VA   +
Sbjct: 240 PWTLPANEAIAVHRDLDYAVVRIRT---DSSDAPE----------------YLLVAEACL 280

Query: 406 PTLEAKWGTKL-----VIKKTLAGSDLENCRYVHPVDNR--QCPVVIGGDYITTESGTGL 458
            T  +    +      V+ + + GSDL   +YV+ +  R  Q   +I   ++T  SG+GL
Sbjct: 281 ETFSSMCCREPDMLSDVVARAIPGSDLLGLQYVNSLRGRSAQPQPIIHASFVTAGSGSGL 340

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFT-----EEAGKFSGLDVLGDGNVAVVKY 513
           VH APGHG EDY   + +GLP+ +PVD EG+FT     +E  + +GL V G+G  AV+  
Sbjct: 341 VHIAPGHGFEDYEVGMSHGLPVPAPVDGEGRFTDAAFPDEPARLTGLSVQGEGGTAVLAL 400

Query: 514 LDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVP 570
           L    +++    Y+HKYPYDWRTKKP I RAT QWFA V   + AA+ ++  V++VP
Sbjct: 401 LGS--AVLATHRYQHKYPYDWRTKKPIIVRATAQWFADVAEIKAAAVASLQTVQFVP 455



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 20/167 (11%)

Query: 574 APGY---GADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGN 630
           AP Y   G D LRLWV++ DYTGDV++   VL+ +     + R  ++ LLG++H+     
Sbjct: 664 APVYDALGPDALRLWVATSDYTGDVVLSQAVLQAVHTTLTRYRTMIKMLLGSMHE----- 718

Query: 631 SISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDR 690
           S     L  +D  A+ QL + + ++  ++  ++F+K    I R++  DLS FY + AKDR
Sbjct: 719 SARIAPLTTLDHMAVLQLRDAMADVAAAFARFEFYKGMAGINRWLANDLSAFYLEAAKDR 778

Query: 691 LYT--GGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLP 735
           LY   GG           VL    L ++R++AP++P L E+ W + P
Sbjct: 779 LYCADGG----------GVLEPIFLGLMRMLAPVVPMLVEEAWDHAP 815


>gi|288818154|ref|YP_003432502.1| isoleucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|384128918|ref|YP_005511531.1| isoleucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787554|dbj|BAI69301.1| isoleucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751755|gb|ADO45238.1| isoleucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 922

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 202/491 (41%), Positives = 271/491 (55%), Gaps = 53/491 (10%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNL 165
           YK T++LPKT F M+A+   REP I K W+     L+    +D   +VLHDGPPYANGN+
Sbjct: 4   YKDTLNLPKTDFPMKAHLPEREPLILKKWEGLYKKLQKL-TSDRPLYVLHDGPPYANGNI 62

Query: 166 HMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDED--AKKDLTPSK 223
           H+GHALNKILKD+IN+Y LL  Y+V Y+PGWDCHGLPIE +V + L      K+D++  +
Sbjct: 63  HIGHALNKILKDVINKYMLLSGYRVHYIPGWDCHGLPIEQQVEKELQAKNIKKEDISKQE 122

Query: 224 LRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRG 283
            R    ++AK  V  Q   FKR GV  DW NPYLT+DP YEA ++   G++  +G I R 
Sbjct: 123 FRKLCREYAKRFVNIQREEFKRLGVLGDWENPYLTMDPAYEACEVRELGKLFHKGLIIRS 182

Query: 284 KKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT 343
           KKPV+W    +TA AEAE+EY +     SIY    +        G  N F      AVWT
Sbjct: 183 KKPVYWCIYDKTAEAEAEVEYYDRE-DPSIYVRLPL-------KGEENTFF-----AVWT 229

Query: 344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASD 403
           TTPWT+PAN  + V     Y   ++                          K   I+A D
Sbjct: 230 TTPWTLPANMGLMVGEDYTYVYYQV-------------------------GKETYIIAED 264

Query: 404 LVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           LV   +   G K  I K + G +L    Y+ P    +  V    +++   SGTG+VH AP
Sbjct: 265 LVENFQNTTGLKGSITKKVKGKELIGLSYIRPYAEEEGKVY-PSEFVELSSGTGIVHMAP 323

Query: 464 GHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIME 523
           GHG+EDY+  L+YGL   SPVDDEG+FT+EA  F     + D N  +V+ L ++  LI E
Sbjct: 324 GHGREDYIVGLRYGLEPYSPVDDEGRFTQEAPPFLRSVRVFDANRLIVEDLKKRGFLIYE 383

Query: 524 EPYEHKYPYDWRTKKPTIFRATEQWFASVEG------FRQAAMDAIGQVKWVPPQEAPGY 577
               H YP+ WR K P IFR+T QWF S+EG       R+ +++ I +VKW+     P Y
Sbjct: 384 GRITHSYPHCWRCKNPVIFRSTPQWFISMEGKLNGKTLRELSLEEIEKVKWI-----PSY 438

Query: 578 GADVLRLWVSS 588
           G + ++  V S
Sbjct: 439 GKNRIKSMVES 449



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/195 (41%), Positives = 116/195 (59%), Gaps = 7/195 (3%)

Query: 562 AIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 620
           ++G V  + PQE    YGAD+LRLWV S DYT DV +G  +L+++ + Y+K+R TLR+LL
Sbjct: 602 SLGNV--ISPQEIIKQYGADILRLWVVSEDYTEDVKLGKSILQRIVEDYKKIRNTLRFLL 659

Query: 621 GNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLS 680
            NL+D+    SI+Y  L   D++ +  L+ +++ I   Y  Y F +++Q I+ F  VDLS
Sbjct: 660 ANLYDFSPQRSIAYHQLHHFDRWMMSYLQMLLEEIGRFYREYAFHRVYQTIRNFCSVDLS 719

Query: 681 NFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTL 740
           + Y DV KDRLY     S+ R S QTVL    +++   IAP L   AE+VW++L      
Sbjct: 720 SLYLDVLKDRLYIYAPDSWERLSAQTVLYELAIALTTSIAPFLSFTAEEVWEHLRNI--- 776

Query: 741 EDGSAAEFVFESKWP 755
            D    E VF SK P
Sbjct: 777 -DNRLPESVFMSKIP 790


>gi|145637267|ref|ZP_01792928.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145269519|gb|EDK09461.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 941

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 192/471 (40%), Positives = 285/471 (60%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T+F MR +   REP++ K W +  ++ ++   + G+ +F+LHDGPPYANG+
Sbjct: 5   YKNTLNLPETSFPMRGDLAKREPDMLKNWYEKNLYQKIRKASKGKKSFILHDGPPYANGS 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + ++ ++ 
Sbjct: 65  IHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKISAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYASEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIENGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPD--LGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F + SA    +    +      L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPVESADEIEAKFSAQGRGQGKLSAIIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + V I  ++ G+DLE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGVEQVKILGSVKGADLELSRFHHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D++   +Y LP+   V ++GKF      F+G  V  + N  V++ L E  +L+
Sbjct: 337 APDHGLDDFIVGKQYDLPMAGLVSNDGKFISTTEFFAGKGVF-EANPLVIEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 123/202 (60%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +      +  +++  +D++A+    +    I+++Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPKRDLVKPEEMISLDRWAVACALDAQNEIKDAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT       RRSCQT L     ++VR +APIL   A+
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKADCLARRSCQTALWHIAEALVRWMAPILSFTAD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++WQ+LP      + + AEFVF
Sbjct: 774 EIWQHLPQT----ESARAEFVF 791


>gi|338731420|ref|YP_004660812.1| Isoleucyl-tRNA synthetase [Thermotoga thermarum DSM 5069]
 gi|335365771|gb|AEH51716.1| Isoleucyl-tRNA synthetase [Thermotoga thermarum DSM 5069]
          Length = 913

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 206/530 (38%), Positives = 295/530 (55%), Gaps = 62/530 (11%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVF-LRVADKNDGENFVLHDGPPYANGN 164
           YK T++LP T F MRAN + +EP I + W    V+   +  + +   F+LHDGPPYANG 
Sbjct: 5   YKDTLNLPSTDFPMRANLVEKEPRILEKWKKIDVYRYLLKQRENCPTFILHDGPPYANGA 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+G A NKILKDI+ +YK+ Q YK  YVPGWD HGLPIE KV   L E AK  ++  ++
Sbjct: 65  IHIGTASNKILKDIVVKYKIFQGYKSPYVPGWDTHGLPIEHKVTTMLGEKAKT-MSAIQI 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R    +FAK+ ++ Q   F+R GV  DW N Y TL P+YE    EVF ++   GYIYR +
Sbjct: 124 RKACEEFAKSQIEMQKKQFQRLGVIGDWENYYATLTPDYEYKIYEVFEKLVEDGYIYRAR 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV W  + +TALA+AE+EY + HVS SIY  F+M  +        NE+     + +WTT
Sbjct: 184 KPVLWCMNCQTALAQAEIEYYD-HVSPSIYVKFKMKDSE-------NEY-----IVIWTT 230

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P N  VAV+    Y  VE+                  G +         IVA  L
Sbjct: 231 TPWTLPGNTGVAVHPDHTYVKVEVN-----------------GEIW--------IVAEKL 265

Query: 405 VPTLEAKWG-TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAP 463
           + ++  + G  +  + +   G +L     +HP+  R    +I  DY+  E+GTG VH AP
Sbjct: 266 LQSMMKELGINEYKVVEKFNGKELNGKLALHPLYERTSR-IITADYVDMETGTGCVHIAP 324

Query: 464 GHGQEDYVTS-LKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIM 522
           GHG+EDY    L +GL +LSPVD+ G FT EAGK+SG++++ + N  +++ L +  +L+ 
Sbjct: 325 GHGEEDYEYGYLIHGLEVLSPVDEAGNFTPEAGKYSGMNIV-EANDVIIEDLRKIGALLK 383

Query: 523 EEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVPP--------- 571
                H YP+ WR K P IFRAT+QWF S++    R+  ++ I +VKWVP          
Sbjct: 384 ASSVSHSYPHCWRCKNPVIFRATDQWFISIDRNNLRKRILEQIEKVKWVPDWGKNRISAM 443

Query: 572 -QEAPGYGADVLRLW-----VSSVDYTGDVMIGPQVLRQMSDIYRKLRGT 615
            +E P +     R+W            G V + PQ +R  ++I ++ +GT
Sbjct: 444 IEERPDWCISRQRVWGVPIPAFKCKDCGHVSLTPQTVRHFAEIVKE-KGT 492



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 118/192 (61%), Gaps = 7/192 (3%)

Query: 570 PPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG 629
           P +    YGADVLRLW++S DY  D+ I  +++ Q  ++Y+KLR T+RYLL NL+D+   
Sbjct: 606 PLEICSKYGADVLRLWLASSDYFNDIRISEKIILQQVEVYKKLRNTIRYLLANLNDFDEK 665

Query: 630 NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKD 689
            ++ Y+ L  ID++AL +L+ IVK++ ++YE Y+F + + I+ ++  V+LS+ Y D+ KD
Sbjct: 666 QAVPYEKLLPIDKWALGRLQQIVKSVTDAYEDYEFSRAYNILVKYCSVELSSVYLDIIKD 725

Query: 690 RLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFV 749
           RLY  G  S  R+S QTVL   L S++ ++APIL    E+ +++         G   E +
Sbjct: 726 RLYVEGKNSLKRKSAQTVLYEILKSVLIMLAPILTFTCEEAYEHF-------RGKKFETI 778

Query: 750 FESKWPVLDEKW 761
           F   WP    +W
Sbjct: 779 FAETWPKYHPEW 790


>gi|393764260|ref|ZP_10352872.1| isoleucyl-tRNA ligase [Alishewanella agri BL06]
 gi|392604890|gb|EIW87789.1| isoleucyl-tRNA ligase [Alishewanella agri BL06]
          Length = 941

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 195/477 (40%), Positives = 281/477 (58%), Gaps = 41/477 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YKHT++LP+T F MR N   REP++   W    ++ ++     G+  F+LHDGPPYANGN
Sbjct: 4   YKHTLNLPETAFAMRGNLAQREPQMLAKWTQDDLYGQIRSAKKGKKTFILHDGPPYANGN 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K L ++   YVPGWDCHGLPIEL V +   +   K LTP++ 
Sbjct: 64  IHIGHAVNKILKDIIVKAKTLSDFDAPYVPGWDCHGLPIELVVEKKYGKPGTK-LTPAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   + AQ   F R GV  DW+NPY T+D   EA  I   G++   G++ +G 
Sbjct: 123 RDKCREYALTQIDAQRTDFIRLGVLGDWHNPYRTMDYVTEANIIRSLGKIIGNGHLQQGF 182

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMV--------SAPPSTSGLLNEFLPD 336
           KPVHW     +ALAEAE+EY +  VS +I   F+++          P   +G        
Sbjct: 183 KPVHWCTDCGSALAEAEVEY-QDKVSPAIDVRFKVLDDSVAAKFDHPAGHAG-----QGP 236

Query: 337 LGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKV 396
           + + +WTTTPWT+PAN AVA+NA LQY++V+++   +G + A                  
Sbjct: 237 ISVVIWTTTPWTIPANRAVALNADLQYSLVQVE---QGPNGAER---------------- 277

Query: 397 FIIVASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESG 455
            +I+A++LV  + A+   +         G+ L+  +  HP+ +   PVV+ G+++TT+SG
Sbjct: 278 -LILATELVKDVMARANIEHYHALGFCQGAALDLVQLQHPLYDFSVPVVL-GEHVTTDSG 335

Query: 456 TGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLD 515
           TG VHTAPGHGQED+V   KYGL + +PV   G +  +   F+G  V    N  VV+ L 
Sbjct: 336 TGCVHTAPGHGQEDFVVGQKYGLEVANPVGANGVYLPDTPLFAGQHVF-KANETVVEALK 394

Query: 516 EQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           E  +L++ + Y+H YP+ WR K P IFRAT QWF S+E  G RQ ++  I Q +W+P
Sbjct: 395 EAGALLVHKAYKHSYPHCWRHKTPIIFRATPQWFISMEQQGLRQTSLAEIEQTRWIP 451



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 136/232 (58%), Gaps = 16/232 (6%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    ++G V  V PQ+     GAD+LRLWV++ DYT ++ +  ++L + +D Y
Sbjct: 601 TVDGEGRKMSKSLGNV--VSPQDVMNKLGADILRLWVATTDYTSEMTVSDEILNRAADKY 658

Query: 610 RKLRGTLRYLLGNLHDWR-VGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +    +++ +++L  +D + + +   + + I ++Y++YQF ++ 
Sbjct: 659 RRIRNTARFLLANLNGFNPQTDALPFNELVELDLWVVNRAAKLQQEIIDAYDNYQFHQVS 718

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q +  F  V+L +FY DV KDR YT  T S  RRSCQT L     ++VR +AP++   A+
Sbjct: 719 QKLMNFCTVELGSFYLDVIKDRQYTAHTESKARRSCQTALYHIAQAMVRWMAPVMSFTAQ 778

Query: 729 DVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEI--YFWGKILEV 778
           ++W+ LP       G ++ +VF   W      +   PVG+    FW ++LEV
Sbjct: 779 EIWEALP-------GQSSPYVFTDVWY---PGFANLPVGKFSDAFWQQLLEV 820


>gi|56460236|ref|YP_155517.1| isoleucyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81821756|sp|Q5QZS6.1|SYI_IDILO RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA
           synthetase; Short=IleRS
 gi|56179246|gb|AAV81968.1| Isoleucyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 944

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 189/474 (39%), Positives = 272/474 (57%), Gaps = 33/474 (6%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YKHT++LP+T F MR N   REP++ + W +  ++ ++     G+  F+LHDGPPYANG 
Sbjct: 4   YKHTLNLPETAFPMRGNLAQREPKMLEQWYETDLYGQIRKAKAGKPKFILHDGPPYANGQ 63

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKD+I + K L ++   YVPGWDCHGLPIEL+V +   +  KK L  ++ 
Sbjct: 64  IHIGHAVNKILKDVIVKAKTLSDFDAPYVPGWDCHGLPIELQVEKKHGKPGKK-LNLAEF 122

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   +  Q   FKR GV  DW+NPYLT++ + EA  +    ++   G++++G 
Sbjct: 123 REKCREYAMTQIDQQRTDFKRLGVLGDWDNPYLTMNFKQEADSVRALAKIIDNGHMHQGF 182

Query: 285 KPVHWSPSSRTALAEAELEY-----PEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGL 339
           KPVHW     +ALAEAE+EY     P   V   + A    V    +  G + E   ++ +
Sbjct: 183 KPVHWCTDCGSALAEAEVEYQDKNSPAIDVRMPVAATAETVDRFSTPEGHVGE--GNVSM 240

Query: 340 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFII 399
            +WTTTPWT+PAN AV +   L+Y +V++    E     PA +               +I
Sbjct: 241 VIWTTTPWTIPANRAVTLAEGLEYTLVQV----EASDDQPAER---------------VI 281

Query: 400 VASDLVPTLEAKWGTKLVIKKTLA-GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGL 458
           +A DLV     +W      K     G DLE  +  HP+   Q PV++ GD++TTESGTG 
Sbjct: 282 LADDLVNDCMERWNITHYHKLGFCKGKDLEGLQLQHPLFELQVPVIL-GDHVTTESGTGC 340

Query: 459 VHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQM 518
           VHTAPGHG +D++   KYG+ + +PV D G + ++   F+G  V    N  +V  L E  
Sbjct: 341 VHTAPGHGVDDFLVGQKYGIEVYNPVGDNGVYKDDTPLFAGQHVF-KANEPIVDKLREVG 399

Query: 519 SLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
           +L+  E Y H YP+ WR K P IFRAT QWF S++  G R  A++ I +V W P
Sbjct: 400 NLMHAESYRHSYPHCWRHKTPIIFRATPQWFISMDKKGLRAGALEQIKKVDWFP 453



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 125/224 (55%), Gaps = 11/224 (4%)

Query: 562 AIGQVKWVPPQEAPG-YGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLL 620
           +IG V  V PQ+     G D+LRLWV+S DY+G++ +  ++L++ +D YR++R T R+LL
Sbjct: 613 SIGNV--VAPQDVMNKLGGDILRLWVASADYSGEMTVSDEILKRSADAYRRIRNTSRFLL 670

Query: 621 GNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDL 679
            NL  +      ++ +D+  +D++ + +  ++   + E+Y +YQF  + Q +  F  ++L
Sbjct: 671 ANLSGFDPKQDLVAKEDMVELDRWIVGRAADLQNELLEAYNNYQFHSVVQKLMHFCSIEL 730

Query: 680 SNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYT 739
            +FY D+ KDR YT  +    RRSCQT L     ++VR +API    A+++W  LP    
Sbjct: 731 GSFYLDIIKDRQYTAKSEGLARRSCQTALYHIAEALVRWMAPICSFTAQEIWDLLP---- 786

Query: 740 LEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVT 783
                 +++VF   W    +++      E  FW ++LE+  VV 
Sbjct: 787 ---NERSQYVFTESWYQGFDEFSGVKDAENEFWMQLLEIRDVVN 827


>gi|145630058|ref|ZP_01785840.1| beta-hexosaminidase [Haemophilus influenzae R3021]
 gi|144984339|gb|EDJ91762.1| beta-hexosaminidase [Haemophilus influenzae R3021]
          Length = 941

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 193/471 (40%), Positives = 283/471 (60%), Gaps = 35/471 (7%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGE-NFVLHDGPPYANGN 164
           YK+T++LP+T+F MR +   REP++ K W +  ++ ++   + G+ +F+LHDGPPYANGN
Sbjct: 5   YKNTLNLPETSFPMRGDLAKREPDMLKNWYEKNLYQKIRKASKGKKSFILHDGPPYANGN 64

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           +H+GHA+NKILKDII + K    +   Y+PGWDCHGLPIELKV + L     + ++ ++ 
Sbjct: 65  IHIGHAVNKILKDIIIKSKTALGFDSPYIPGWDCHGLPIELKV-EGLVGKPNEKISAAEF 123

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  ++A   V+ Q   F R GV  DW+NPYLT++ + EA  I   G++   G++Y+G 
Sbjct: 124 RQKCREYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNFDTEANIIRTLGKVIENGHLYKGS 183

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGL--LNEFLPDLGLAVW 342
           KPVHW     ++LAEAE+EY E  VS SIY  F  VSA         + +    L   +W
Sbjct: 184 KPVHWCLDCGSSLAEAEVEY-EDKVSPSIYVRFPAVSAVEIEEKFNAVGKGHGKLSAVIW 242

Query: 343 TTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVAS 402
           TTTPWT+P+N A+AVNA L+Y +V+                      L D++   +I+A+
Sbjct: 243 TTTPWTMPSNRAIAVNADLEYNLVQ----------------------LGDER---VILAA 277

Query: 403 DLVPTLEAKWGTKLV-IKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +LV ++    G + V +  ++ G  LE  R+ HP  +   PV++ GD++TT+ GTGLVHT
Sbjct: 278 ELVESVAKAVGIEQVEVLGSVKGQALELVRFNHPFYDFTVPVIL-GDHVTTDGGTGLVHT 336

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           AP HG +D+V   +Y LP+   V ++GKF      F+G  V  + N  V++ L E  +L+
Sbjct: 337 APDHGLDDFVVGKQYDLPMAGLVANDGKFISTTEFFAGKGVF-EANPLVIEKLQEVGNLL 395

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVE--GFRQAAMDAIGQVKWVP 570
             E  +H YP+ WR K P IFRAT QWF  +E  G RQ A+  I QV+W+P
Sbjct: 396 KVEKIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKQVRWIP 446



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 123/202 (60%), Gaps = 8/202 (3%)

Query: 551 SVEGFRQAAMDAIGQVKWVPPQEA-PGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIY 609
           +V+G  +    +IG +  V PQE    +G D+LRLWV+S DYTG++ +  ++L++ +D Y
Sbjct: 596 TVDGQGRKMSKSIGNI--VTPQEVMDKFGGDILRLWVASTDYTGEMTVSDEILKRAADSY 653

Query: 610 RKLRGTLRYLLGNLHDWRVGNS-ISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIF 668
           R++R T R+LL NL+ +      I  +++  +D++A+    +    I+++Y++YQF  + 
Sbjct: 654 RRIRNTARFLLANLNGFDPKRDLIKPEEMISLDRWAVACALDAQHEIKDAYDNYQFHTVV 713

Query: 669 QIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAE 728
           Q + RF  V++ +FY D+ KDR YT    S  RRSCQT L     ++VR +APIL    +
Sbjct: 714 QRLMRFCSVEMGSFYLDIIKDRQYTTKANSLARRSCQTALWHIAEALVRWMAPILSFTTD 773

Query: 729 DVWQNLPFAYTLEDGSAAEFVF 750
           ++WQ+LP      + + AEFVF
Sbjct: 774 EIWQHLPQT----ESARAEFVF 791


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.135    0.408 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,829,388,777
Number of Sequences: 23463169
Number of extensions: 561862487
Number of successful extensions: 1365551
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18823
Number of HSP's successfully gapped in prelim test: 2186
Number of HSP's that attempted gapping in prelim test: 1268036
Number of HSP's gapped (non-prelim): 51104
length of query: 794
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 643
effective length of database: 8,816,256,848
effective search space: 5668853153264
effective search space used: 5668853153264
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)