Query 003805
Match_columns 794
No_of_seqs 376 out of 2165
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 04:38:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003805.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003805hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3se6_A Endoplasmic reticulum a 100.0 1.2E-84 4E-89 789.1 51.3 665 12-787 66-778 (967)
2 2xdt_A Endoplasmic reticulum a 100.0 5.8E-82 2E-86 766.3 49.3 649 12-787 6-710 (897)
3 4fke_A Aminopeptidase N; zinc 100.0 4.9E-82 1.7E-86 768.8 45.6 657 12-787 8-716 (909)
4 3ebh_A PFA-M1, M1 family amino 100.0 1.2E-78 4E-83 722.7 54.5 542 14-682 9-578 (889)
5 1z5h_A Tricorn protease intera 100.0 1.3E-79 4.5E-84 735.5 41.7 594 19-782 1-610 (780)
6 3b34_A Aminopeptidase N; prote 100.0 3E-78 1E-82 724.2 51.5 566 12-701 32-627 (891)
7 2gtq_A Aminopeptidase N; alani 100.0 1.4E-74 4.6E-79 694.9 54.0 579 15-720 12-622 (867)
8 3u9w_A Leukotriene A-4 hydrola 100.0 1.9E-72 6.4E-77 657.3 27.1 451 18-533 13-473 (608)
9 3cia_A Cold-active aminopeptid 100.0 2.1E-66 7.2E-71 606.0 35.9 432 10-518 15-463 (605)
10 2xq0_A LTA-4 hydrolase, leukot 100.0 1.4E-66 4.9E-71 609.1 32.3 433 10-517 17-465 (632)
11 4fgm_A Aminopeptidase N family 99.9 7.3E-24 2.5E-28 244.4 18.3 312 186-514 108-452 (597)
12 3rjo_A Endoplasmic reticulum a 99.0 2.9E-09 9.8E-14 118.6 15.1 206 510-787 1-227 (419)
13 1te4_A Conserved protein MTH18 78.4 3 0.0001 36.9 5.8 67 660-735 47-113 (131)
14 3ltm_A Alpha-REP4; protein eng 77.9 8.6 0.00029 36.8 9.5 91 665-781 90-181 (211)
15 3ltm_A Alpha-REP4; protein eng 75.9 9.9 0.00034 36.4 9.3 49 667-719 30-78 (211)
16 3ltj_A Alpharep-4; protein eng 74.0 10 0.00035 35.9 8.7 24 758-781 152-176 (201)
17 1u4g_A Elastase, pseudolysin; 69.3 27 0.00094 35.8 10.9 98 277-385 72-175 (301)
18 2y3u_A Collagenase, collagenas 66.5 3.1 0.0001 48.6 3.4 36 347-382 424-468 (785)
19 3ltj_A Alpharep-4; protein eng 63.7 12 0.00041 35.4 6.7 50 666-719 24-73 (201)
20 1bqb_A Protein (aureolysin); h 60.9 40 0.0014 34.6 10.2 99 277-383 66-177 (301)
21 1oyz_A Hypothetical protein YI 58.5 20 0.0007 35.8 7.7 70 660-736 164-233 (280)
22 1te4_A Conserved protein MTH18 58.2 10 0.00035 33.3 4.7 54 660-718 78-131 (131)
23 3cqb_A Probable protease HTPX 57.1 12 0.00042 32.0 4.8 16 345-360 83-98 (107)
24 1oyz_A Hypothetical protein YI 54.7 21 0.00072 35.7 7.0 66 662-737 198-263 (280)
25 2vqx_A Metalloproteinase; ther 53.9 88 0.003 32.6 11.5 105 276-388 88-200 (341)
26 3dnz_A Thermolysin; hydrolase, 52.5 75 0.0025 32.8 10.5 102 276-385 68-177 (316)
27 4ger_A Gentlyase metalloprotea 49.2 76 0.0026 32.5 9.9 101 277-385 62-170 (304)
28 3nqx_A MCP-02, secreted metall 37.4 1.6E+02 0.0056 30.0 10.2 98 277-385 73-176 (306)
29 4db6_A Armadillo repeat protei 32.9 72 0.0025 29.8 6.6 80 656-737 12-107 (210)
30 3c37_A Peptidase, M48 family; 30.7 25 0.00084 35.2 2.8 54 304-361 63-116 (253)
31 2ejq_A Hypothetical protein TT 26.0 29 0.001 30.8 2.0 25 344-369 88-112 (130)
32 4db6_A Armadillo repeat protei 22.5 1.1E+02 0.0038 28.4 5.8 72 663-736 61-148 (210)
33 2kd2_A FAS apoptotic inhibitor 22.1 3.3E+02 0.011 22.5 7.5 65 182-254 8-73 (94)
34 4db8_A Armadillo-repeat protei 21.3 1.4E+02 0.0047 28.7 6.4 72 663-736 61-148 (252)
35 2ys9_A Homeobox and leucine zi 21.1 1E+02 0.0036 24.0 4.0 42 460-508 19-60 (70)
36 4hxt_A De novo protein OR329; 20.8 1.2E+02 0.004 29.0 5.7 73 661-736 8-96 (252)
No 1
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=100.00 E-value=1.2e-84 Score=789.06 Aligned_cols=665 Identities=15% Similarity=0.179 Sum_probs=477.8
Q ss_pred CCCCCCCeEEEEEEEEEEEeccCcEEEEEEEEEEEc-CCcceEEEeccCceeeEEEEcCeeeeeeeCCCCcccchhhhhc
Q 003805 12 TKVENSGAVVRHQKLCLSIDMEKHQIYGYTELEIAV-PDIGIVGLHAENLGIESVLVDGEPTEFEYYPHNHQNVENEKRW 90 (794)
Q Consensus 12 ~~~~~~~~~~~hy~l~L~id~~~~~~~G~v~I~i~~-~~~~~I~L~~~~l~I~~V~v~g~~~~f~~~~~~~~~~~~~~~~ 90 (794)
.++....++|.||+|.|++|+++.+|+|.|+|++.+ .+++.|.||+++|+|++|.|++.......... ..+.
T Consensus 66 ~~RLP~~v~P~hY~L~L~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~I~~v~v~~~~~~~~~~~~-~~~~------ 138 (967)
T 3se6_A 66 ELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPG-KELK------ 138 (967)
T ss_dssp CSSCCTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCCSEEEEECSSCEEEEEEEEECC---CCSSC-EECE------
T ss_pred cccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEEEcCCCEEEEECCCCEEEEEEEeccCCccccccc-ceee------
Confidence 356678999999999999999999999999999987 56899999999999999998632210000000 0000
Q ss_pred cccCCCCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhhhhhhccccCCCCCccCCC-ceEEEEEEEEeccCcc
Q 003805 91 RSMVSSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQN-VKLVRIDYWVEKVEVG 169 (794)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~I~~~~~~~~~~~~~~~~~l~~~~~y~g~~~~~-~~~~~~~y~~~~~~~G 169 (794)
...-.....|.|.++. .++.|. .+++ .+.|+|.++.. .|++++.|... +|
T Consensus 139 --------------------~~~~~~~~~l~i~l~~---~L~~g~-~~~l--~i~y~g~~~~~~~G~y~s~y~~~---~g 189 (967)
T 3se6_A 139 --------------------VLSYPAHEQIALLVPE---KLTPHL-KYYV--AMDFQAKLGDGFEGFYKSTYRTL---GG 189 (967)
T ss_dssp --------------------EEEEGGGTEEEEECSS---CCCTTC-CEEE--EEEEEEECBSSSSEEEEEEEECT---TS
T ss_pred --------------------eEEecCCCEEEEEcCC---ccCCCC-eEEE--EEEEEEecCCCccceeeeeeEcC---CC
Confidence 0000001136776543 233332 2333 47889988765 49999988642 34
Q ss_pred eEeeeceEeeccccCCcceEEeecCCCCCeeEEEEEEEEeCCeEEEEcCceeeeeeccCCCCceEEEEecCCCCcceeEE
Q 003805 170 IHFDGNALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQNLIAVSAGSLLYQVLSKDDPPRKTYVYRLDVPVSAKWIT 249 (794)
Q Consensus 170 ~~f~~~~~~T~~ep~~Ar~wFPC~D~p~~katf~l~i~~p~~~~avsng~l~~~~~~~~~~~~~~~~f~~t~p~s~ylia 249 (794)
. ..++++|||||.+||+||||||+|+.||+|+|+|++|++|+|+|||++.++.. .++++++++|..++|||+|++|
T Consensus 190 ~--~~~~~~Tq~ep~~AR~~FPC~DeP~~KAtf~itI~~p~~~~alSN~~~~~~~~--~~~g~~~~~F~~t~pmstYLva 265 (967)
T 3se6_A 190 E--TRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNMPKVKTIE--LEGGLLEDHFETTVKMSTYLVA 265 (967)
T ss_dssp C--EEEEEEEECTTTTGGGTSCBCCSTTCCBEEEEEEEECTTCEEEESSCEEEEEE--CTTSCEEEEECCCCSBCGGGCC
T ss_pred c--eEEEEEEecccCCCCeEEEecCCcCceeEEEEEEEECCCcEEEeCCCccccee--cCCCeEEEEEecCCCccceeEE
Confidence 2 25688999999999999999999999999999999999999999999976543 3568899999999999999999
Q ss_pred EEEeeceEeecC--CCCcEEEEEcCCchhHHHHHHHHHHHHHHHHHHHcCCCCCCCCccEEEECCCCcccccccccchhh
Q 003805 250 LAVAPFEVLPDH--HQSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFLAPEMAVSSSTFGAAMGI 327 (794)
Q Consensus 250 favG~f~~~~~~--~~~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~vp~~~~~~~~~~gagl~~ 327 (794)
|+||+|+.++.. .+.++++|++|+..++++++++.+.++++|||++||+||||+|||+|++|++..++||+| ||++
T Consensus 266 ~~vg~f~~~~~~~~~gv~v~v~~~p~~~~~~~~al~~~~~~l~~~e~~fg~~YP~~k~d~v~vPdf~~GaMEn~--Glit 343 (967)
T 3se6_A 266 YIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENW--GLIT 343 (967)
T ss_dssp EEEECCEEEEEECTTCCEEEEEECGGGGGGGHHHHHHHHHHHHHHHHHHTCCCCSSEEEEEEESSCSSSEECCT--TEEE
T ss_pred EEEeceEEEEeecCCCcEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccEEEecCCCCcccccC--Cccc
Confidence 999999998753 467899999999999999999999999999999999999999999999999888999999 6899
Q ss_pred h-ccccccCcccchhhh--hHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHHhCchhHHHHHHHHhcc
Q 003805 328 F-SSQILYDEKVIDQAI--DTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEARYRRYKANCA 404 (794)
Q Consensus 328 ~-~~~lL~~~~~~~~~~--~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EG~A~y~~~~~~~~~~G~~~~~~~~~~~~~~ 404 (794)
| ++.+|++++..+... ....+||||+|||||||+|||+||+|+|||||||+|++++++++.+|.....-........
T Consensus 344 y~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFGnlVT~~wW~dlWLnEGFAty~e~~~~~~~~p~~~~~~~~~~~~~~ 423 (967)
T 3se6_A 344 YRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFE 423 (967)
T ss_dssp EEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHH
T ss_pred cchhheecCcccCCHHhhHhHHHHHHHHHHHHHhcCccccCCCccccHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 9 556888887543322 2345899999999999999999999999999999999999999998876541000111111
Q ss_pred hhhhccCCCcccCCCCccccCC-CCcccccccceehhhHHHHHHHHHHhhChHHHHHHHHHHHHhhhcCCCCCCCCHHHH
Q 003805 405 VCKADDSGATALSSSASCKDLY-GTQCIGIFGKIRSCKSVAILQMLEKQMGSNFFRKILQNIISRAQGASPVRTLSTKEF 483 (794)
Q Consensus 405 ~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~f~~i~Y~Kg~~vl~mLe~~lG~e~F~~~L~~yl~~~~~~~~~~~~st~~f 483 (794)
.+..|.. ..+.|...++. +.++..+|+.++|.||++|||||+..||++.|+++|+.|++++++++ ++++||
T Consensus 424 al~~D~~----~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KGa~vL~mL~~~lG~e~F~~gLr~Yl~~~~~~n----at~~Dl 495 (967)
T 3se6_A 424 VITKDSL----NSSRPISKPAETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRN----AKNDDL 495 (967)
T ss_dssp HHTTTTS----TTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTEE----ECHHHH
T ss_pred HHHhhcc----cCCCCceeecCCHHHHHHhcchhhhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCC----CCHHHH
Confidence 1111110 01111111221 23455689999999999999999999999999999999999999996 689999
Q ss_pred HHHHHHhcC------------------------CCcccHHhHHhhhccCCCceEEEEEEEEecCCcEEEEEEEeecCCCC
Q 003805 484 RHFANKVGN------------------------LERPFLKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKP 539 (794)
Q Consensus 484 ~~~~e~~~~------------------------~~~~dl~~f~~~Wv~~~G~P~l~v~~~~n~k~~~v~l~i~q~~~~~~ 539 (794)
++.++++.. .++.||++||++|+.|+|+|+++|+++ ++.+.|+|+|+.....
T Consensus 496 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~~q~G~Pvl~V~~~----~~~~~l~Q~rf~~~~~ 571 (967)
T 3se6_A 496 WSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWTLQKGIPLLVVKQD----GCSLRLQQERFLQGVF 571 (967)
T ss_dssp HHHHHCC-------------------------CCCCCCHHHHHHHHHHSCSCEEEEEEEE----TTEEEEEEEECCCC--
T ss_pred HHHHHHHhhhccccccccccccccccccccccccCCcCHHHHHHHHhcCCCCcEEEEEec----CCEEEEEeeeecCCCC
Confidence 998887521 146799999999999999999999873 4678899998764211
Q ss_pred CCCCccccCCCCCCCCCCCCCCccceEEEEeccCCcccccccccCCCcceEEEeeecccchhhhhcCCCCCCCCCCCCCC
Q 003805 540 DSRTPVLSSNTDSENRDGDIGWPGMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSKLAARRALKPKKGSKPDGCDDN 619 (794)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~pltiri~e~dg~~eh~~~~~~~~~~~~~~i~~~~k~~~~r~~k~~~~~~~~~~~~~ 619 (794)
.. .++......+..|++|+++..... ++....+ +..+ -. .
T Consensus 572 ~~-------~~~~~~~~~~~~W~IPl~~~~~~~-~~~~~~~--l~~~-~~--~--------------------------- 611 (967)
T 3se6_A 572 QE-------DPEWRALQERYLWHIPLTYSTSSS-NVIHRHI--LKSK-TD--T--------------------------- 611 (967)
T ss_dssp ----------------CCSCCCCCCEEEEESSC-CCCEEEC--CCSS-EE--E---------------------------
T ss_pred CC-------ccccccccCCceEEEEEEEEeCCC-CccceEE--ecCC-ce--E---------------------------
Confidence 00 000000012358999999976432 2211111 0000 00 0
Q ss_pred CCcccccccccCCCCCeeEEEecCCCceeEEEeccCchHHH---HHHHcccCC---hH---HHHHHHHHHHcCCCCchhH
Q 003805 620 GDAVAGLDMRSSMESPLSWIRADPEMEYLAEIHFNQPVQMW---INQLEKDGD---VV---AQAQAIAALEALPHLSFNV 690 (794)
Q Consensus 620 ~d~~~~~d~~~~~~~~~~wIr~D~~~~~~~~v~~~~~~~m~---~~qL~~d~d---v~---aq~~a~~~l~~~~~~~~~~ 690 (794)
+ ....+.+||.+|+++.++|||+ |++.+| +.+|+.++. +. .-++++.+|++.+..+...
T Consensus 612 ---i-------~~~~~~~wi~~N~~~~GyyRV~--Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~ 679 (967)
T 3se6_A 612 ---L-------DLPEKTSWVKFNVDSNGYYIVH--YEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDK 679 (967)
T ss_dssp ---E-------ECSSCCSCEEESGGGCSSCEEE--EETTHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTTSSCHHH
T ss_pred ---E-------eccCCCceEEEeCCccEEEEEe--cCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 0 0112357999999999999995 545555 678866543 22 3348888899988888877
Q ss_pred HhHHHHhhccCcchhHHHHHHHHHHHhhccccc--cccc-HHHHHHHHHhcCCCC---CCCCCCCCCCCChHHHHHHHHH
Q 003805 691 VNTLNNFLSDSKAFWRVRIEAAYALANTASEET--DWAG-LLHLVKFYKSRRFDE---NIGLPRPNDFRDFSEYFVLEVI 764 (794)
Q Consensus 691 ~~~L~~~l~~~~~f~~VR~~Aa~~L~~~~~~~~--~~~g-~~~L~~~f~~~~~~~---~~~i~~~n~f~~~~~y~~~kai 764 (794)
...|++.|.+|+. |-|+..|...|..+..... .... ...+.++.++. ..| ..+.. ++ .+...-.++..|
T Consensus 680 ~l~l~~~l~~E~~-~~~w~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~lg~~-~~--~~~~~~~lR~~i 754 (967)
T 3se6_A 680 ALDMTYYLQHETS-SPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQY-FKPVIDRQSWS-DK--GSVWDRMLRSAL 754 (967)
T ss_dssp HHHHTTGGGTCCC-HHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHT-THHHHHHCCSS-CC--SCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCc-HHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH-HHHHHHHcCCC-CC--CcHHHHHHHHHH
Confidence 7778999999864 8999999999987653211 0000 11232332221 111 00111 12 245666778888
Q ss_pred HHHHhcC-ChhHHHHHHHHHHHHH
Q 003805 765 ALRLFHM-PLPWLELLTTKAQEKL 787 (794)
Q Consensus 765 ~~a~~~~-~~~~~~~~~~~~~~~~ 787 (794)
...+|.. ..+|++.+..+.++-+
T Consensus 755 l~~ac~~g~~~c~~~A~~~f~~~~ 778 (967)
T 3se6_A 755 LKLACDLNHAPCIQKAAELFSQWM 778 (967)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhh
Confidence 8888999 8999999988776543
No 2
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=100.00 E-value=5.8e-82 Score=766.32 Aligned_cols=649 Identities=14% Similarity=0.190 Sum_probs=473.9
Q ss_pred CCCCCCCeEEEEEEEEEEEeccCcEEEEEEEEEEEc-CCcceEEEeccCceeeEEEEcCe---eeeeeeCCCCcccchhh
Q 003805 12 TKVENSGAVVRHQKLCLSIDMEKHQIYGYTELEIAV-PDIGIVGLHAENLGIESVLVDGE---PTEFEYYPHNHQNVENE 87 (794)
Q Consensus 12 ~~~~~~~~~~~hy~l~L~id~~~~~~~G~v~I~i~~-~~~~~I~L~~~~l~I~~V~v~g~---~~~f~~~~~~~~~~~~~ 87 (794)
.++....+.|.||+|+|++|+++.+|+|.|+|++.+ .+++.|.||+++|+|.+|+|++. ++.+.....
T Consensus 6 ~~rLp~~~~p~hY~l~L~~d~~~~~f~G~v~I~~~~~~~~~~I~L~~~~l~I~~v~v~~~~~~~~~~~~~~~-------- 77 (897)
T 2xdt_A 6 KIRLPEYVIPVHYDLLIHANLTTLTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGAGERLSEEPLQV-------- 77 (897)
T ss_dssp CSSCCSSEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCEEEEEEECSSCEEEEEEEEEC----CEEEECEE--------
T ss_pred cCcCCCCcEeeEEEEEEEEecCCCeEEEEEEEEEEEEcCCCEEEEEeCCCEEEEEEEEecCCccccccccee--------
Confidence 456778999999999999999999999999999986 46889999999999999999642 221111000
Q ss_pred hhccccCCCCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhhhhhhccccCCCCCccCCC-ceEEEEEEEEecc
Q 003805 88 KRWRSMVSSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQN-VKLVRIDYWVEKV 166 (794)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~I~~~~~~~~~~~~~~~~~l~~~~~y~g~~~~~-~~~~~~~y~~~~~ 166 (794)
........|.|.++.+ ++.|. .+++ .+.|+|.++.. .|++++.|...
T Consensus 78 ------------------------~~~~~~~~l~i~l~~~---L~~g~-~~~L--~i~y~g~~~~~~~G~y~s~y~~~-- 125 (897)
T 2xdt_A 78 ------------------------LEHPRQEQIALLAPEP---LLVGL-PYTV--VIHYAGNLSETFHGFYKSTYRTK-- 125 (897)
T ss_dssp ------------------------EEETTTTEEEEEEEEE---ECTTC-CEEE--EEEEEEECBSSSSEEEEEEEECT--
T ss_pred ------------------------EEcCCCcEEEEEeCCc---cCCCC-EEEE--EEEEEEEeCCCCceeEeeeeecC--
Confidence 0000112466765431 22221 2333 46888888654 59999988632
Q ss_pred CcceEeeeceEeeccccCCcceEEeecCCCCCeeEEEEEEEEeCCeEEEEcCceeeeeeccCCCCceEEEEecCCCCcce
Q 003805 167 EVGIHFDGNALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQNLIAVSAGSLLYQVLSKDDPPRKTYVYRLDVPVSAK 246 (794)
Q Consensus 167 ~~G~~f~~~~~~T~~ep~~Ar~wFPC~D~p~~katf~l~i~~p~~~~avsng~l~~~~~~~~~~~~~~~~f~~t~p~s~y 246 (794)
+|. .+++++|||||.+||+||||+|+|+.||+|+|+|++|++|+|+|||+++++.. .++++++++|..++|||+|
T Consensus 126 -~g~--~~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~itI~~p~~~~alSN~~~~~~~~--~~~g~~~~~f~~t~pmstY 200 (897)
T 2xdt_A 126 -EGE--LRILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVT--VAEGLIEDHFDVTVKMSTY 200 (897)
T ss_dssp -TSC--EEEEEEEECTTTTHHHHSCBCCSTTSCBEEEEEEEECTTCEEEESSCEEEEEE--EETTEEEEEECCCCSBCGG
T ss_pred -CCc--eeEEEEecceecccceEEeccCCccccCeEEEEEEEcCCceEecCCCccceEe--cCCCEEEEEEeCCCccchh
Confidence 343 25678999999999999999999999999999999999999999999987543 2357899999999999999
Q ss_pred eEEEEEeeceEeec--CCCCcEEEEEcCCchhHHHHHHHHHHHHHHHHHHHcCCCCCCCCccEEEECCCCcccccccccc
Q 003805 247 WITLAVAPFEVLPD--HHQSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFLAPEMAVSSSTFGAA 324 (794)
Q Consensus 247 liafavG~f~~~~~--~~~~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~vp~~~~~~~~~~gag 324 (794)
++||+||+|+.++. ..+.++++|++|+..+.++++++.+.++++|||++||+||||+||++|++|++..++|||| |
T Consensus 201 L~a~~vg~f~~~~~~~~~gv~v~v~~~~~~~~~~~~al~~~~~~l~~~e~~fg~~YP~~k~d~v~vpdf~~GaMEn~--g 278 (897)
T 2xdt_A 201 LVAFIISDFESVSKITKSGVKVSVYAVPDKINQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENW--G 278 (897)
T ss_dssp GCCEEEECCEEEEEECTTCCEEEEEECTTTGGGCHHHHHHHHHHHHHHHHHTTCCCCSSEEEEEEESSCSSSEECCT--T
T ss_pred heEEEEEcceeeccccCCCeeEEEEcCCChHHHHHHHHHHHHHHHHHHHHHhCCCCCccceeEEEeCCCcccchhcC--C
Confidence 99999999999876 3357899999999999999999999999999999999999999999999999888999999 6
Q ss_pred hhhhc-cccccCcccchhhh--hHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHHhCchhHHHHHHHH
Q 003805 325 MGIFS-SQILYDEKVIDQAI--DTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEARYRRYKA 401 (794)
Q Consensus 325 l~~~~-~~lL~~~~~~~~~~--~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EG~A~y~~~~~~~~~~G~~~~~~~~~~~ 401 (794)
|++|+ +.+|++++..+... ....+||||+|||||||+|||+||+|+|||||||+||+++++++.+|...........
T Consensus 279 lit~~e~~ll~~~~~~~~~~~~~~~~viaHElAHqWFGnlVT~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~f~~~ 358 (897)
T 2xdt_A 279 LTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYFFGK 358 (897)
T ss_dssp EEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHHCGGGCGGGGHHHH
T ss_pred eeEEeeeeEeECCCCCcHHHHHHHHHHHHHHHHHHHcCCEeccCCcchhhhhHHHHHHHHHHHHHHhCCcchHHHHHHHH
Confidence 88994 56889887654322 3345899999999999999999999999999999999999999998865421110111
Q ss_pred hcchhhhccCCCcccCCCCccccC-CCCcccccccceehhhHHHHHHHHHHhhChHHHHHHHHHHHHhhhcCCCCCCCCH
Q 003805 402 NCAVCKADDSGATALSSSASCKDL-YGTQCIGIFGKIRSCKSVAILQMLEKQMGSNFFRKILQNIISRAQGASPVRTLST 480 (794)
Q Consensus 402 ~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~f~~i~Y~Kg~~vl~mLe~~lG~e~F~~~L~~yl~~~~~~~~~~~~st 480 (794)
....+..|. .. .+.|...++ .+.++...|+.++|.||++|||||+..||++.|+++|+.|++++++++ +++
T Consensus 359 ~~~a~~~D~-~~---~~~Pi~~~v~~p~~i~~~fd~i~Y~KGa~vl~mL~~~lG~e~F~~gl~~Yl~~~~~~~----a~~ 430 (897)
T 2xdt_A 359 CFDAMEVDA-LN---SSHPVSTPVENPAQIREMFDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKN----TKN 430 (897)
T ss_dssp HHHHHHHHT-ST---TCCCSSCCCCSHHHHHHTSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTEE----ECH
T ss_pred HHHHHHhhc-cc---CCCCCEEeCCCHHHHHHhcchhhhhhHHHHHHHHHHHhCHHHHHHHHHHHHHHhccCC----CCH
Confidence 111111121 10 111111122 123455689999999999999999999999999999999999999986 689
Q ss_pred HHHHHHHHHhcC---------------C-C--------cccHHhHHhhhccCCCceEEEEEEEEecCCcEEEEEEEeecC
Q 003805 481 KEFRHFANKVGN---------------L-E--------RPFLKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCT 536 (794)
Q Consensus 481 ~~f~~~~e~~~~---------------~-~--------~~dl~~f~~~Wv~~~G~P~l~v~~~~n~k~~~v~l~i~q~~~ 536 (794)
+||++.++++.. . + +.||++||++|++++|+|+++|+++ ++.+.|+|+|+..
T Consensus 431 ~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~g~dl~~~~~~W~~q~G~P~l~v~~~----~~~~~l~Q~~f~~ 506 (897)
T 2xdt_A 431 EDLWDSMASICPTDGVKGMDGFCSRSQHSSSSSHWHQEGVDVKTMMNTWTLQKGFPLITITVR----GRNVHMKQEHYMK 506 (897)
T ss_dssp HHHHHHHHTC----------------------------CCCHHHHHHHHHSSCSEEEEEEEEE----TTEEEEEEEEECC
T ss_pred HHHHHHHHHHhhhccccccccccccccccccccccccCCCCHHHHHHHhhcCCCceEEEEEEc----CCEEEEEEEEeec
Confidence 999998887510 1 1 5799999999999999999999875 4567888888753
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCCccceEEEEeccCCcccccccccCCCcceEEEeeecccchhhhhcCCCCCCCCCCC
Q 003805 537 VKPDSRTPVLSSNTDSENRDGDIGWPGMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSKLAARRALKPKKGSKPDGC 616 (794)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pltiri~e~dg~~eh~~~~~~~~~~~~~~i~~~~k~~~~r~~k~~~~~~~~~~ 616 (794)
... .+ . .....|++|+++.... +.. .+. .| +...+. .
T Consensus 507 ~~~----------~~--~-~~~~~w~iPi~~~~~~-~~~-~~~-------~~----l~~~~~----~------------- 543 (897)
T 2xdt_A 507 GSD----------GA--P-DTGYLWHVPLTFITSK-SDM-VHR-------FL----LKTKTD----V------------- 543 (897)
T ss_dssp C------------------CCCCCCCEEEEEEESS-CSS-CEE-------EE----ECSSEE----E-------------
T ss_pred CCC----------CC--C-CCCceEEEEEEEEeCC-CCc-cce-------EE----ecCCce----E-------------
Confidence 211 00 0 1234799999986421 111 111 11 110000 0
Q ss_pred CCCCCcccccccccCCCCCeeEEEecCCCceeEEEeccCchHHH---HHHHcccC---ChHHH---HHHHHHHHcCCCCc
Q 003805 617 DDNGDAVAGLDMRSSMESPLSWIRADPEMEYLAEIHFNQPVQMW---INQLEKDG---DVVAQ---AQAIAALEALPHLS 687 (794)
Q Consensus 617 ~~~~d~~~~~d~~~~~~~~~~wIr~D~~~~~~~~v~~~~~~~m~---~~qL~~d~---dv~aq---~~a~~~l~~~~~~~ 687 (794)
+ ....+.+||.+|+++.++|||+++ +.+| +.+|..++ ++..| ++++.+|++.+..+
T Consensus 544 ------~-------~~~~~~~~i~~N~~~~gyyrV~Yd--~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~ 608 (897)
T 2xdt_A 544 ------L-------ILPEEVEWIKFNVGMNGYYIVHYE--DDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLS 608 (897)
T ss_dssp ------E-------ECSSCCSCEEESGGGCSSCEEEEC--TTHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHTTTSSC
T ss_pred ------E-------EccCCCceEEECCCceEEEEEEcC--HHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCC
Confidence 0 011235799999999999999555 4444 67887665 44332 48888899988888
Q ss_pred hhHHhHHHHhhccCcchhHHHHHHHHHHHhhcccc---ccc---ccHH-----HHHHHHHhcCCCCCCCCCCCCCCCChH
Q 003805 688 FNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEE---TDW---AGLL-----HLVKFYKSRRFDENIGLPRPNDFRDFS 756 (794)
Q Consensus 688 ~~~~~~L~~~l~~~~~f~~VR~~Aa~~L~~~~~~~---~~~---~g~~-----~L~~~f~~~~~~~~~~i~~~n~f~~~~ 756 (794)
......|++.|.+|+. |.|+..|...|..+...- ..+ ..+. .+...|.+.-+.+ + .+..
T Consensus 609 ~~~~l~l~~~l~~E~~-~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~-------~--~~~~ 678 (897)
T 2xdt_A 609 IEKALDLSLYLKHETE-IMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLIDKQTWTD-------E--GSVS 678 (897)
T ss_dssp HHHHHHHHGGGGGCCC-HHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTCCSSC-------C--SCHH
T ss_pred HHHHHHHHHHhcCCCc-HHHHHHHHHHHHHHHHHhcCChhhhHHHHHHHHHHHHHHHHHHHcCCCC-------C--CCHH
Confidence 7777778899999864 899999999888765421 111 1111 1222333322222 1 2344
Q ss_pred HHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHH
Q 003805 757 EYFVLEVIALRLFHM-PLPWLELLTTKAQEKL 787 (794)
Q Consensus 757 ~y~~~kai~~a~~~~-~~~~~~~~~~~~~~~~ 787 (794)
.=.++..|...+|.. ..+|++.+..+-++-+
T Consensus 679 ~~~lr~~~~~~ac~~g~~~c~~~a~~~f~~~~ 710 (897)
T 2xdt_A 679 ERMLRSQLLLLACVHNYQPCVQRAEGYFRKWK 710 (897)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 455677778888998 9999999888776544
No 3
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=100.00 E-value=4.9e-82 Score=768.84 Aligned_cols=657 Identities=14% Similarity=0.178 Sum_probs=470.8
Q ss_pred CCCCCCCeEEEEEEEEEEEeccC-----cEEEEEEEEEEEc-CCcceEEEeccCceeeE----EEEcCe---e-e---ee
Q 003805 12 TKVENSGAVVRHQKLCLSIDMEK-----HQIYGYTELEIAV-PDIGIVGLHAENLGIES----VLVDGE---P-T---EF 74 (794)
Q Consensus 12 ~~~~~~~~~~~hy~l~L~id~~~-----~~~~G~v~I~i~~-~~~~~I~L~~~~l~I~~----V~v~g~---~-~---~f 74 (794)
.++....++|.||+|.|++|++. .+|+|.|+|++.+ .+++.|.||+++|+|.+ |.+++. . . ..
T Consensus 8 ~yRLP~~v~P~hY~l~L~~~l~~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~i~~~~~~~~~~~~~~~~~~~~~~~ 87 (909)
T 4fke_A 8 RYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYTTQGHMVVLRGVGDSQVPEIDRT 87 (909)
T ss_dssp SSSCCSSEEEEEEEEEEEECCSCCSSSCCEEEEEEEEEEEESSCEEEEEEECCSCEECCSSSSCEEEESTTCCCCCEEEE
T ss_pred cccCcCCCEeEEEEEEEEEcCcCCCCCCceEEEEEEEEEEEecCCCEEEEEcCCCEEEeeeeEEEEecCCCcceecccce
Confidence 46788899999999999998753 4799999999987 56899999999999975 222211 0 0 01
Q ss_pred eeCCCCcccchhhhhccccCCCCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhhhhhhccccCCCCCccCCCc
Q 003805 75 EYYPHNHQNVENEKRWRSMVSSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQNV 154 (794)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~I~~~~~~~~~~~~~~~~~l~~~~~y~g~~~~~~ 154 (794)
.+. .....|+|.++. .++.|. .+++ .+.|+|.++...
T Consensus 88 ~~~-------------------------------------~~~~~l~i~l~~---~l~~g~-~~~l--~i~y~g~~~~~~ 124 (909)
T 4fke_A 88 ELV-------------------------------------ELTEYLVVHLKG---SLQPGH-MYEM--ESEFQGELADDL 124 (909)
T ss_dssp EEE-------------------------------------TTTTEEEEEEEE---EECTTC-EEEE--EEEEEEECCSSS
T ss_pred EEe-------------------------------------cCCcEEEEEcCC---CcCCCC-EEEE--EEEEEEEECCCC
Confidence 111 011236776643 233332 2344 478999888654
Q ss_pred -eEEEEEEEEeccCcceEeeeceEeeccccCCcceEEeecCCCCCeeEEEEEEEEeCCeEEEEcCceeeeee-ccCCCCc
Q 003805 155 -KLVRIDYWVEKVEVGIHFDGNALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQNLIAVSAGSLLYQVL-SKDDPPR 232 (794)
Q Consensus 155 -~~~~~~y~~~~~~~G~~f~~~~~~T~~ep~~Ar~wFPC~D~p~~katf~l~i~~p~~~~avsng~l~~~~~-~~~~~~~ 232 (794)
|+|++.|... .. .+++++|||||.+||+||||||+|++||||+|+|++|++|+|+|||+++++.. ..+++++
T Consensus 125 ~G~y~s~y~~~--~~----~~~~~~Tqfep~~AR~~FPc~DeP~~KAtf~i~i~~p~~~~alSN~~~~~~~~~~~~~~~~ 198 (909)
T 4fke_A 125 AGFYRSEYMEG--NV----KKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNW 198 (909)
T ss_dssp SEEEEEEEEET--TE----EEEEEEEECTTTTGGGTSCBCCSTTSCBEEEEEEEEETTSEEEESSCBSSSCEECTTCTTE
T ss_pred eEEEEeeEEEC--Cc----eEEEEEEcCcccCcCEEEEeCCccccceEEEEEEEECCCCEEEcCCcccccccceecCCCe
Confidence 9999999742 12 26789999999999999999999999999999999999999999999876543 2346789
Q ss_pred eEEEEecCCCCcceeEEEEEeeceEeecCC--CCcEEEEEcCCchhH--HHHHHHHHHHHHHHHHHHcCCCCCCCCccEE
Q 003805 233 KTYVYRLDVPVSAKWITLAVAPFEVLPDHH--QSLMSHICLPANVSK--IHNTVEFFHNAFSHYETYLDAKFPFGSYKQV 308 (794)
Q Consensus 233 ~~~~f~~t~p~s~yliafavG~f~~~~~~~--~~~v~~~~~p~~~~~--~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V 308 (794)
++++|..++|||+|++||+||+|+.++... +.++++|++|+..+. .+++++.++++++|||++||+||||+|+|+|
T Consensus 199 ~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~g~~~~v~~~p~~~~~~~~~~al~~~~~~l~~~e~~~~~~Yp~~k~d~v 278 (909)
T 4fke_A 199 SVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQI 278 (909)
T ss_dssp EEEEBCCCCSBCGGGCCEEEESCEEEEEECTTSCEEEEEECHHHHHTTTTHHHHHHHHHHHHHHHHHTTSCCSSSEEEEE
T ss_pred EEEEEecCCCccceeeEEEecceEEEeeccCCCcEEEEEEecchhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcccEE
Confidence 999999999999999999999999886543 578999999997654 4689999999999999999999999999999
Q ss_pred EECCCCcccccccccchhhh-ccccccCcccchhhhh--HHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHH
Q 003805 309 FLAPEMAVSSSTFGAAMGIF-SSQILYDEKVIDQAID--TSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFI 385 (794)
Q Consensus 309 ~vp~~~~~~~~~~gagl~~~-~~~lL~~~~~~~~~~~--~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EG~A~y~~~~~~ 385 (794)
++|++..++|||| ||++| ++.+|++++..+.... ...+||||||||||||+|||+||+|+|||||||+|++++++
T Consensus 279 ~vpdf~~gaMEn~--glit~~e~~ll~d~~~s~~~~~~~~~~viaHElAHqWFGnlVT~~~W~dlWLnEGFAty~e~~~~ 356 (909)
T 4fke_A 279 ALPDFNAGAMENW--GLVTYRENALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGA 356 (909)
T ss_dssp EETTCTTCEECCT--TEEEEEHHHHCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHH
T ss_pred EecCCCCcccccC--cccccccceeecCcccCChHHHHHHHHHHHHHHHhhhhcCeecccccCcceeehHHHHHHHHHHH
Confidence 9999989999999 68999 5678999876544333 33589999999999999999999999999999999999999
Q ss_pred HHHhCchhHHHHHH-HHhcchhhhcc-CCCcccCCCCccccC-CCCcccccccceehhhHHHHHHHHHHhhChHHHHHHH
Q 003805 386 KKFLGNNEARYRRY-KANCAVCKADD-SGATALSSSASCKDL-YGTQCIGIFGKIRSCKSVAILQMLEKQMGSNFFRKIL 462 (794)
Q Consensus 386 ~~~~G~~~~~~~~~-~~~~~~~~~~~-~~~~~l~~~~~~~~~-~~~~~~~~f~~i~Y~Kg~~vl~mLe~~lG~e~F~~~L 462 (794)
++.+|.....-... .........+. ....++... ..++ .+.++..+|+.++|.||++|||||+..||++.|+++|
T Consensus 357 ~~~~~~~~~~~~f~~~~~~~~~~~d~~~~~~pi~~~--~~~v~~~~~i~~~fd~i~Y~KGa~vL~mL~~~lG~e~F~~gl 434 (909)
T 4fke_A 357 DHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTP--AEEVNTPAQISEMFDSISYSKGASVIRMLSNFLTEDLFKEGL 434 (909)
T ss_dssp HHHSTTSCGGGGHHHHTHHHHHHHHTSTTCCCSCCC--GGGCCSHHHHHTTSSHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HhccccccHHHhhhhhHHHHHHHHhhhcccCCcccc--ccccCChhhHHhhhhhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 99988765421110 00111111111 111111110 0112 1235567899999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCCCCHHHHHHHHHHhcCCC-----cccHHhHHhhhccCCCceEEEEEEEEecCCcEEEEEEEeecCC
Q 003805 463 QNIISRAQGASPVRTLSTKEFRHFANKVGNLE-----RPFLKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTV 537 (794)
Q Consensus 463 ~~yl~~~~~~~~~~~~st~~f~~~~e~~~~~~-----~~dl~~f~~~Wv~~~G~P~l~v~~~~n~k~~~v~l~i~q~~~~ 537 (794)
+.|++++++++ ++++||++.++++++.. +.++++||++|++|+|+|+|+|+.+ .+ .++|+|+...
T Consensus 435 ~~Yl~~~~~~n----a~~~Dl~~~l~~~s~~~~~~~~~~~v~~~~~~W~~q~G~Pvv~V~~~----~~--~~~q~~~~~~ 504 (909)
T 4fke_A 435 ASYLHAFAYQN----TTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPVITVDTK----TG--NISQKHFLLD 504 (909)
T ss_dssp HHHHHHHTTEE----ECHHHHHHHHHHHHHTCSSCCCSSCHHHHHHHHHSSCSCEEEEEETT----TT--EEEEEECCSC
T ss_pred HHHHHhhcccC----CCHHHHHHHHHHHhCcccccccchhHHhHhhCccccCCCcEEEEEec----cC--cEEEEEEEec
Confidence 99999999996 68999999888876432 2469999999999999999999532 23 4677877543
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCccceEEEEeccCCcccccccccCCCcceEEEeeecccchhhhhcCCCCCCCCCCCC
Q 003805 538 KPDSRTPVLSSNTDSENRDGDIGWPGMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSKLAARRALKPKKGSKPDGCD 617 (794)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~pltiri~e~dg~~eh~~~~~~~~~~~~~~i~~~~k~~~~r~~k~~~~~~~~~~~ 617 (794)
.... . ......+..|++|+++... |..... .|. .+. ... .
T Consensus 505 ~~~~--------~-~~~~~~~~~w~IPl~~~~~---~~~~~~-------~~~-~~~--~~~----------~-------- 544 (909)
T 4fke_A 505 SESN--------V-TRSSAFDYLWIVPISSIKN---GVMQDH-------YWL-RDV--SQA----------Q-------- 544 (909)
T ss_dssp TTCC--------C-CSCCTTTTCCCEEECEEET---TEECCC-------EEE-CSC--SEE----------E--------
T ss_pred cCCC--------C-CCCCCCCceEEEEEEEEeC---CCccce-------EEe-ecc--ccc----------e--------
Confidence 2110 0 0011234579999987542 221110 010 000 000 0
Q ss_pred CCCCcccccccccCCCCCeeEEEecCCCceeEEEeccCchHHH---HHHHcccCChH------HHHHHHHHHHcCCCCch
Q 003805 618 DNGDAVAGLDMRSSMESPLSWIRADPEMEYLAEIHFNQPVQMW---INQLEKDGDVV------AQAQAIAALEALPHLSF 688 (794)
Q Consensus 618 ~~~d~~~~~d~~~~~~~~~~wIr~D~~~~~~~~v~~~~~~~m~---~~qL~~d~dv~------aq~~a~~~l~~~~~~~~ 688 (794)
.+ + ....+.+||.+|+++.++||| +|++.+| +.+|+.+++.+ +-++++.+|++.+..+.
T Consensus 545 --~~-~-------~~~~~~~wi~~N~~~~gyyRV--~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~ag~~~~ 612 (909)
T 4fke_A 545 --ND-L-------FKTASDDWVLLNVNVTGYFQV--NYDEDNWRMIQHQLQTNLSVIPVINRAQVIYDSFNLATAHMVPV 612 (909)
T ss_dssp --CG-G-------GCCCTTCCEEESGGGCSSCEE--EECHHHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHHTTSSCH
T ss_pred --ee-e-------ccCCCCCeEEECCCceEEEEE--ecCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCH
Confidence 00 0 011234799999999999999 5666666 57887665543 34478888999888887
Q ss_pred hHHhHHHHhhccCcchhHHHHHHHHHHHhhcccccccccHHHHH--------HHHHhcCCCCCCCCCCCCCCCChHHHHH
Q 003805 689 NVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLV--------KFYKSRRFDENIGLPRPNDFRDFSEYFV 760 (794)
Q Consensus 689 ~~~~~L~~~l~~~~~f~~VR~~Aa~~L~~~~~~~~~~~g~~~L~--------~~f~~~~~~~~~~i~~~n~f~~~~~y~~ 760 (794)
.....|.+.|.+|+. |-|+..|...|..+...-..-.....+. ..|++.-......-.++ .+...-++
T Consensus 613 ~~~l~l~~~l~~E~~-y~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~---~~~~~~~l 688 (909)
T 4fke_A 613 TLALDNTLFLNGEKE-YMPWQAALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERP---ENLMDQYS 688 (909)
T ss_dssp HHHHHTTGGGGGCCS-HHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTSCC---SSHHHHHH
T ss_pred HHHHHHHHHHccCcc-HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhhhhccccccc---ccHHHHHH
Confidence 777778999999864 8999999999987754311111111122 22322111111001111 35666677
Q ss_pred HHHHHHHHhcC-ChhHHHHHHHHHHHHH
Q 003805 761 LEVIALRLFHM-PLPWLELLTTKAQEKL 787 (794)
Q Consensus 761 ~kai~~a~~~~-~~~~~~~~~~~~~~~~ 787 (794)
+..+...+|.. ..+|++.+....++-+
T Consensus 689 r~~~l~~ac~~g~~~c~~~a~~~f~~~~ 716 (909)
T 4fke_A 689 EINAISTACSNGLPQCENLAKTLFDQWM 716 (909)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHh
Confidence 77788888888 9999999988776544
No 4
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=100.00 E-value=1.2e-78 Score=722.73 Aligned_cols=542 Identities=13% Similarity=0.133 Sum_probs=417.1
Q ss_pred CCCCCeEEEEEEEEEEEeccCcEEEEEEEEEEEcC-CcceEEEeccCceeeEEEEcCeeee----eeeCCCCcccchhhh
Q 003805 14 VENSGAVVRHQKLCLSIDMEKHQIYGYTELEIAVP-DIGIVGLHAENLGIESVLVDGEPTE----FEYYPHNHQNVENEK 88 (794)
Q Consensus 14 ~~~~~~~~~hy~l~L~id~~~~~~~G~v~I~i~~~-~~~~I~L~~~~l~I~~V~v~g~~~~----f~~~~~~~~~~~~~~ 88 (794)
.+++++.+.||+|+|++|++++.++|.++|++... +++.|.||+++|+|.+|+|||.++. |.+.+
T Consensus 9 y~~~~~~V~h~~L~l~ld~~~~~v~G~~~i~~~~~~~~~~l~LD~~~L~I~sV~vnG~~l~~~~~~~~~~---------- 78 (889)
T 3ebh_A 9 YKPSGFIINQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLKINEISINNKKLVEGEEYTYDN---------- 78 (889)
T ss_dssp CCCCSEEEEEEEEEEEECSSCEEEEEEEEEEECTTCCSCCEEEECCSCEEEEEEETTEECCBTTTEEECS----------
T ss_pred CCCCCcEEEEEEEEEEEeCCCeEEEEEEEEEEecCCCCceEEEECCCCEEEEEEECCEEcCcccceEecC----------
Confidence 56789999999999999999999999999998753 4789999999999999999998753 33321
Q ss_pred hccccCCCCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhhhhhhccccCCCCCccCCCceEEEEEEEEeccCc
Q 003805 89 RWRSMVSSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQNVKLVRIDYWVEKVEV 168 (794)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~I~~~~~~~~~~~~~~~~~l~~~~~y~g~~~~~~~~~~~~y~~~~~~~ 168 (794)
..|.|.++. ++. +.++++ +.|+|.+... ..-.
T Consensus 79 -----------------------------~~L~I~l~~----l~~--~~~~l~--I~y~~~p~~~-----------~~l~ 110 (889)
T 3ebh_A 79 -----------------------------EFLTIFSKF----VPK--SKFAFS--SEVIIHPETN-----------YALT 110 (889)
T ss_dssp -----------------------------SEEEECGGG----SCS--SSEEEE--EEEEECGGGC-----------TTCS
T ss_pred -----------------------------CEEEEecCC----CCC--CcEEEE--EEEEecCccC-----------CCce
Confidence 136664421 111 112222 3333332210 0112
Q ss_pred ceEeeeceEeeccccCCcceEEeecCCCCCeeEEEEEEEEeCC-e-EEEEcCceeeeeeccCCCCceEEEEecCCCCcce
Q 003805 169 GIHFDGNALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQN-L-IAVSAGSLLYQVLSKDDPPRKTYVYRLDVPVSAK 246 (794)
Q Consensus 169 G~~f~~~~~~T~~ep~~Ar~wFPC~D~p~~katf~l~i~~p~~-~-~avsng~l~~~~~~~~~~~~~~~~f~~t~p~s~y 246 (794)
|+++.+.+++|||||.+||+||||+|+|+.||+|+++|++|++ | +++|||+++++... ++++++++|..++|||+|
T Consensus 111 Gly~s~~~~~TQ~Ep~~AR~~fPC~DeP~~KAtf~itIt~p~~~~~valSNg~l~~~~~~--~~g~~~~~f~~t~pmstY 188 (889)
T 3ebh_A 111 GLYKSKNIIVSQCEATGFRRITFFIDRPDMMAKYDVTVTADKEKYPVLLSNGDKVNEFEI--PGGRHGARFNDPPLKPCY 188 (889)
T ss_dssp EEEEETTEEEEECTTTTGGGTSCBCCSTTCCEEEEEEEEEETTTCCEEEESSEEEEEEEE--TTTEEEEEEEEEEEECGG
T ss_pred eeEEECCeEEEcccCCCCCEEEEEcCCCCcceEEEEEEEEccccCeEEEccCccccceec--CCCeEEEEEecCCccchh
Confidence 5555556899999999999999999999999999999999997 8 57999999876542 457889999999999999
Q ss_pred eEEEEEeeceEeecC-----CC--CcEEEEEcCCchhHHHHHHHHHHHHHHHHHHHcCCCCCCCCccEEEECCCCccccc
Q 003805 247 WITLAVAPFEVLPDH-----HQ--SLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFLAPEMAVSSS 319 (794)
Q Consensus 247 liafavG~f~~~~~~-----~~--~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~vp~~~~~~~~ 319 (794)
++||+||+|+++++. .+ .++++|++|+..+.++++++.++++|+|||++||+||||+||++|++|++..++||
T Consensus 189 LvA~~vG~f~~~~~~~~t~~~G~~v~l~vy~~p~~~~~~~~al~~~~~~l~~~e~~fG~pYP~~kyd~VavPdF~~GaME 268 (889)
T 3ebh_A 189 LFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECLKKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAME 268 (889)
T ss_dssp GCCEEEECEEEEEEEEECSSSCCEEEEEEEEEGGGGGGGHHHHHHHHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEEC
T ss_pred heeeEEecceEEeeeeeecCCCCceEEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHCCCCCCCceEEEEeccccchhhc
Confidence 999999999988652 22 46899999999999999999999999999999999999999999999998889999
Q ss_pred ccccchhhh-ccccccCcccc-hhhh-hHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHHhCchhHHH
Q 003805 320 TFGAAMGIF-SSQILYDEKVI-DQAI-DTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEARY 396 (794)
Q Consensus 320 ~~gagl~~~-~~~lL~~~~~~-~~~~-~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EG~A~y~~~~~~~~~~G~~~~~~ 396 (794)
|| ||++| +..+|+++... +... ....+|+||+|||||||+|||+||+|+|||||||+|++.++.++..|....++
T Consensus 269 N~--GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHQWFGNlVT~~~W~dlWLnEGFAtY~e~~~~~~~~~~~~~r~ 346 (889)
T 3ebh_A 269 NK--GLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDWFQLTLKEGLTVHRENLFSEEMTKTVTTRL 346 (889)
T ss_dssp CT--TEEEEEGGGTCCCTTTSCTHHHHHHHHHHHHHHHTTTBTTTBEESSGGGHHHHHHHHHHHHHHHHHHHHCCTHHHH
T ss_pred CC--ceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhcCeeeecccccceeeHHHHHHHHHHHHHHhcCHHHHHH
Confidence 99 68889 55678877643 3222 23458999999999999999999999999999999999999999888776544
Q ss_pred HHHHHhcchhhhccCCCcccCCCCccccCCC---CcccccccceehhhHHHHHHHHHHhhChHHHHHHHHHHHHhhhcCC
Q 003805 397 RRYKANCAVCKADDSGATALSSSASCKDLYG---TQCIGIFGKIRSCKSVAILQMLEKQMGSNFFRKILQNIISRAQGAS 473 (794)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~f~~i~Y~Kg~~vl~mLe~~lG~e~F~~~L~~yl~~~~~~~ 473 (794)
.............+.+ +..+++.+ .++.++|+.++|.||++|||||+..||++.|+++|+.|+++|++++
T Consensus 347 ~~~~~lr~~~~~~D~~-------~~shPI~~~~~~ei~~~f~~i~Y~KGa~vLrML~~~lGde~F~~gLr~Yl~~~~~~n 419 (889)
T 3ebh_A 347 SHVDLLRSVQFLEDSS-------PLSHPIRPESYVSMENFYTTTVYDKGSEVMRMYLTILGEEYYKKGFDIYIKKNDGNT 419 (889)
T ss_dssp HHHHHHHHHHHHHHTS-------TTCCCSSCSEESCGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHHhhhhccC-------ccCCCCCCcchhhhhhhccchhhhHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCC
Confidence 3322111100111211 12223322 2456789999999999999999999999999999999999999986
Q ss_pred CCCCCCHHHHHHHHHHhcC----CCcccHHhHHhhhccCCCceEEEEEEEEecCCcEEEEEEEeecCCCCCCCCccccCC
Q 003805 474 PVRTLSTKEFRHFANKVGN----LERPFLKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSN 549 (794)
Q Consensus 474 ~~~~~st~~f~~~~e~~~~----~~~~dl~~f~~~Wv~~~G~P~l~v~~~~n~k~~~v~l~i~q~~~~~~~~~~~~~~~~ 549 (794)
++++||++.+++++. ..|.||+. |++|++++|+|+|+|+.+++.+++.++|+|+|......
T Consensus 420 ----att~Df~~ale~as~~~~~~~g~dL~~-f~~Wl~q~G~P~l~V~~~~d~~~~~~~ltl~Q~~~~~~---------- 484 (889)
T 3ebh_A 420 ----ATCEDFNYAMEQAYKMKKADNSANLNQ-YLLWFSQSGTPHVSFKYNYDAEKKQYSIHVNQYTKPDE---------- 484 (889)
T ss_dssp ----ECHHHHHHHHHHHHHHHHTCTTCCCTG-GGHHHHCCSCCEEEEEEEEETTTTEEEEEEEEECCCCS----------
T ss_pred ----CCHHHHHHHHHHHhhhccCCCCCCHHH-HHHHhcCCCCceEEEEEeecCCCCEEEEEEEEecCCCC----------
Confidence 799999999988760 01357885 68999999999999999999877888899888753211
Q ss_pred CCCCCCCCCCCCccceEEEEecc-CCcc---cccccccCCCcceEEEeeecccchhhhhcCCCCCCCCCCCCCCCCcccc
Q 003805 550 TDSENRDGDIGWPGMMSIRVHEL-DGMY---DHPILPMAGDAWQLLEIQCHSKLAARRALKPKKGSKPDGCDDNGDAVAG 625 (794)
Q Consensus 550 ~~~~~~~~~~~~~~pltiri~e~-dg~~---eh~~~~~~~~~~~~~~i~~~~k~~~~r~~k~~~~~~~~~~~~~~d~~~~ 625 (794)
.......|++|++|.+... +|.- .+++ .+. +.-+.+.++
T Consensus 485 ----~~~~~~~~~IPl~v~l~~~~~G~~~~~~~~l-~l~-~~~q~f~~~------------------------------- 527 (889)
T 3ebh_A 485 ----NQKEKKPLFIPISVGLINPENGKEMISQTTL-ELT-KESDTFVFN------------------------------- 527 (889)
T ss_dssp ----SCSSCCCCCEEEEEEEECTTTCCBCSCCEEE-EEC-SSEEEEEES-------------------------------
T ss_pred ----CCCCCceEEEEEEEEEEeCCCCccccceeEE-Eec-CCcEEEEEc-------------------------------
Confidence 0112347999999999877 7752 1111 111 111112221
Q ss_pred cccccCCCCCeeEEEecCCCceeEEEeccCchHHHHHHHcccCChHHHHHHHHHHHc
Q 003805 626 LDMRSSMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVAQAQAIAALEA 682 (794)
Q Consensus 626 ~d~~~~~~~~~~wIr~D~~~~~~~~v~~~~~~~m~~~qL~~d~dv~aq~~a~~~l~~ 682 (794)
...+.+ |+.+|+++....++++++++.++..||.+|.|..+|.||++.|+.
T Consensus 528 -----~~~~~p-~~sl~r~fsa~v~l~~~~~~~~l~~l~~~d~d~~~r~~a~~~l~~ 578 (889)
T 3ebh_A 528 -----NIAVKP-IPSLFRGFSAPVYIEDQLTDEERILLLKYDSDAFVRYNSCTNIYM 578 (889)
T ss_dssp -----CCCSCC-EEEESTTCCSSSEEECCCCHHHHHHHHHHCSCHHHHHHHHHHHHH
T ss_pred -----CCCCCC-eEEEcCCCCceEEEeCCCCHHHHHHHHhhCCChhHHHHHHHHHHH
Confidence 001112 558999999999999999999999999999999999999988864
No 5
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=100.00 E-value=1.3e-79 Score=735.45 Aligned_cols=594 Identities=14% Similarity=0.174 Sum_probs=448.9
Q ss_pred eEEEEEEEEEEEeccCcEEEEEEEEEEEcCCcceEEEeccCceeeEEEEcCeeeeeeeCCCCcccchhhhhccccCCCCC
Q 003805 19 AVVRHQKLCLSIDMEKHQIYGYTELEIAVPDIGIVGLHAENLGIESVLVDGEPTEFEYYPHNHQNVENEKRWRSMVSSPS 98 (794)
Q Consensus 19 ~~~~hy~l~L~id~~~~~~~G~v~I~i~~~~~~~I~L~~~~l~I~~V~v~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 98 (794)
++|.||+|+|++|+++.+|+|.|+| . .+++.|.||+++|+|++|+++|.++++.+++.
T Consensus 1 v~p~hY~l~l~~~~~~~~f~G~v~I--~-~~~~~i~L~~~~l~I~~v~~~g~~~~~~~~~~------------------- 58 (780)
T 1z5h_A 1 MEVEKYDLTLDFDIQKRTFNGTETI--T-ADAGDIVLDAVGLQINWMKVNGRDTAFTYDGQ------------------- 58 (780)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEEE--E-ECSSCEEEECSSCEEEEEEETTEECCCEECSS-------------------
T ss_pred CEEEEEEEEEEEECCCCEEEEEEEE--E-cCCCEEEEEccCCEEEEEEEeceeccEEEECC-------------------
Confidence 4799999999999999999999999 4 66889999999999999999998877765531
Q ss_pred cHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhhhhhhccccCCCCCccCCC-ceEEEEEEEEeccCcceEeeeceE
Q 003805 99 SAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQN-VKLVRIDYWVEKVEVGIHFDGNAL 177 (794)
Q Consensus 99 ~~~~~~~~~~~~~l~~~~~~~L~I~~~~~~~~~~~~~~~~~l~~~~~y~g~~~~~-~~~~~~~y~~~~~~~G~~f~~~~~ 177 (794)
.|.|.++ + | .+++ .+.|+|.++.. .|++++.|. ++++
T Consensus 59 --------------------~l~i~~~-~------g--~~~l--~i~y~g~~~~~~~G~y~~~y~-----------~~~~ 96 (780)
T 1z5h_A 59 --------------------TVRAPGD-S------Q--PQKI--EISFAGKVSDSLSGIYYAGRE-----------NGMI 96 (780)
T ss_dssp --------------------EEEECCC-S------S--SEEE--EEEEEEECBSSSSEEEEESST-----------TCEE
T ss_pred --------------------EEEEEeC-C------c--cEEE--EEEEEEEeCCCcccceecccc-----------ceEE
Confidence 2566432 1 1 2333 36777776654 366665431 4678
Q ss_pred eeccccCCcceEEeecCCCCCeeEEEEEEEEeCCeEEEEcCceeeeeeccCCCCceEEEEecCCCCcceeEEEEEeeceE
Q 003805 178 HTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQNLIAVSAGSLLYQVLSKDDPPRKTYVYRLDVPVSAKWITLAVAPFEV 257 (794)
Q Consensus 178 ~T~~ep~~Ar~wFPC~D~p~~katf~l~i~~p~~~~avsng~l~~~~~~~~~~~~~~~~f~~t~p~s~yliafavG~f~~ 257 (794)
+|||||.+||+||||+|+|+.||+|+|+|++|++|+|+|||+++++ . .+++++++|..++|||+|++||+||+|+.
T Consensus 97 ~Tq~ep~~AR~~fPc~DeP~~Katf~iti~~p~~~~~lSN~~~~~~-~---~~g~~~~~f~~t~~mstYL~a~~vg~f~~ 172 (780)
T 1z5h_A 97 TTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISNMPPKRI-E---VSERKVVEFQDTPRMSTYLLYVGIGKFRY 172 (780)
T ss_dssp EEECTTTCGGGTSCBCCCTTSCBEEEEEEEECTTCEEEESSCEEEE-E---ESSSEEEEECCCCSBCGGGCCEEEECCEE
T ss_pred EEccccCChhheeecCCCcccccEEEEEEEECCCCEEEeCCccccc-c---CCCceEEEEecCCcccceEEEEEEeccEE
Confidence 9999999999999999999999999999999999999999998765 1 35788999999999999999999999999
Q ss_pred eecCC-CCcEEEEEcCCchhHHHHHHHHHHHHHHHHHHHcCCCCCCCCccEEEECCCCcccccccccchhhh-ccccccC
Q 003805 258 LPDHH-QSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFLAPEMAVSSSTFGAAMGIF-SSQILYD 335 (794)
Q Consensus 258 ~~~~~-~~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~vp~~~~~~~~~~gagl~~~-~~~lL~~ 335 (794)
++... +.++++|++|+ +.++++++.++++++||+++||+||||+||++|++|++..++|||| |+++| ++.+|++
T Consensus 173 ~~~~~~gv~~~v~~~~~--~~~~~al~~~~~~l~~~e~~fg~~YP~~k~d~v~vpdf~~GaMEn~--glit~~e~~ll~~ 248 (780)
T 1z5h_A 173 EYEKYRDIDLILASLKD--IRSKYPLDMARKSVEFYENYFGIPYALPKMHLISVPEFGAGAMENW--GAITFREIYMDIA 248 (780)
T ss_dssp EEEEETTEEEEEEESSC--CCCSHHHHHHHHHHHHHHHHHSSCCSSSEEEEEEETTCTTCEECCT--TEEEEEHHHHSCC
T ss_pred EeeccCCeeEEEEEccc--hhHHHHHHHHHHHHHHHHHHhCCCCCCccCCEEEcCCCCCCccccc--CeeEeecceEeec
Confidence 87543 57899999998 6778999999999999999999999999999999998878899999 68888 4568887
Q ss_pred cccchhh-hhHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHHhCchhHHHHHHH--HhcchhhhccCC
Q 003805 336 EKVIDQA-IDTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEARYRRYK--ANCAVCKADDSG 412 (794)
Q Consensus 336 ~~~~~~~-~~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EG~A~y~~~~~~~~~~G~~~~~~~~~~--~~~~~~~~~~~~ 412 (794)
+...... .....+||||+|||||||+|||+||+|+|||||||+||+++++++.+|++.+ +..+. .....+..| ..
T Consensus 249 ~~~~~~~~~~~~~viaHElaHqWfGnlVT~~~W~dlWLnEGfA~y~~~~~~~~~~~~~~~-~~~f~~~~~~~al~~D-~~ 326 (780)
T 1z5h_A 249 ENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFATFMSYKTMDTLFPEWSF-WGDFFVSRTSGALRSD-SL 326 (780)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHCTTTCH-HHHHHHHTHHHHHHHT-TS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCcccccccHHHHHHHHHHHHHHhCCchhH-HHHHHHHHHHHHHHHh-hc
Confidence 3322222 2234589999999999999999999999999999999999999999888653 11111 111111111 11
Q ss_pred CcccCCCCccccC-CCCcccccccceehhhHHHHHHHHHHhhChHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhc
Q 003805 413 ATALSSSASCKDL-YGTQCIGIFGKIRSCKSVAILQMLEKQMGSNFFRKILQNIISRAQGASPVRTLSTKEFRHFANKVG 491 (794)
Q Consensus 413 ~~~l~~~~~~~~~-~~~~~~~~f~~i~Y~Kg~~vl~mLe~~lG~e~F~~~L~~yl~~~~~~~~~~~~st~~f~~~~e~~~ 491 (794)
. ...|...++ .+.++..+|+.++|.||++|||||+..||++.|+++|+.|++++++++ ++++||++.+++++
T Consensus 327 ~---~~~pi~~~v~~~~~~~~~fd~i~Y~KGa~vl~mL~~~lG~e~F~~~l~~yl~~~~~~~----~t~~Dl~~~l~~~s 399 (780)
T 1z5h_A 327 K---NTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAGYEEFRKGISKYLNDHKFGN----AEGSDLWTAIEDVS 399 (780)
T ss_dssp T---TCCCSCCCCCSSCCTTTTSCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTEE----ECHHHHHHHHHHHH
T ss_pred c---CCCCceecCCCHHHHHHhcchhhhhhHHHHHHHHHHHhCHHHHHHHHHHHHHHhccCC----CCHHHHHHHHHHHh
Confidence 0 111111122 234556789999999999999999999999999999999999999985 68999999999987
Q ss_pred CCCcccHHhHHhhhccCCCceEEEEEEEEecCCcEEEEEEEeecCCCCCCCCccccCCCCCCCCCCCCCCccceEEEEec
Q 003805 492 NLERPFLKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDGDIGWPGMMSIRVHE 571 (794)
Q Consensus 492 ~~~~~dl~~f~~~Wv~~~G~P~l~v~~~~n~k~~~v~l~i~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pltiri~e 571 (794)
+ .|+++||++|++++|+|+++|++ + ++.+.|+|+|+.... .....|++|+++ .
T Consensus 400 g---~dl~~~~~~W~~~~G~P~l~v~~--~--~~~~~l~Q~~f~~~~-----------------~~~~~w~iPi~~-~-- 452 (780)
T 1z5h_A 400 G---KPVKRVMEYWIKNPGYPVIKLKR--N--GRKITMYQTRFLLNG-----------------EEEGRWPVPVNI-K-- 452 (780)
T ss_dssp C---SCHHHHHHHHHHSCSCEEEEEEE--S--SSEEEEEEEECCSSC-----------------CEECCCCEEEEE-E--
T ss_pred C---CCHHHHHHHHHhCCCCceEEEEe--c--CcEEEEEEEEecCCC-----------------CCCceEEEEEEE-c--
Confidence 4 68999999999999999999986 2 456788888764310 112479999999 3
Q ss_pred cCCcccccccccCCCcceEEEeeecccchhhhhcCCCCCCCCCCCCCCCCcccccccccCCCCCeeEEEecCCCceeEEE
Q 003805 572 LDGMYDHPILPMAGDAWQLLEIQCHSKLAARRALKPKKGSKPDGCDDNGDAVAGLDMRSSMESPLSWIRADPEMEYLAEI 651 (794)
Q Consensus 572 ~dg~~eh~~~~~~~~~~~~~~i~~~~k~~~~r~~k~~~~~~~~~~~~~~d~~~~~d~~~~~~~~~~wIr~D~~~~~~~~v 651 (794)
.+|. .+ .. + ..+ . .. + +.. +||.+|++..++|||
T Consensus 453 ~~~~-~~-----------~~-l--~~~----------~----------~~-~---------~~~-~~i~~N~~~~gyyrv 486 (780)
T 1z5h_A 453 KKDG-VE-----------RI-L--LED----------E----------AS-I---------EAD-GLIKINADSAGFYRV 486 (780)
T ss_dssp ETTE-EE-----------EE-E--ECS----------S----------EE-E---------ECT-TEEEESGGGCSSSEE
T ss_pred CCCc-ee-----------ee-c--cCc----------e----------EE-c---------cCC-ceEEEeCCCCEEEEE
Confidence 2332 11 01 1 110 0 00 1 112 699999999999999
Q ss_pred eccCchHHHH---HHHcccCChHHH---HHHHHHHHcCCCCchhHHhHHHHhhccCcchhHHHHHHHHHHHhhccccccc
Q 003805 652 HFNQPVQMWI---NQLEKDGDVVAQ---AQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDW 725 (794)
Q Consensus 652 ~~~~~~~m~~---~qL~~d~dv~aq---~~a~~~l~~~~~~~~~~~~~L~~~l~~~~~f~~VR~~Aa~~L~~~~~~~~~~ 725 (794)
+|++.+|. .+| ..-++..| ++++.+|++.+..+......|.+.|.+|+ .|.|+..|...|..+......+
T Consensus 487 --~Yd~~~~~~l~~~l-~~i~~~~Ra~li~D~~~l~~~g~~~~~~~l~l~~~l~~E~-~~~~w~~~~~~l~~~~~~~~~~ 562 (780)
T 1z5h_A 487 --LYDDATFSDVMGHY-RDLSPLDRIGLVDDLFAFLLSGHIDPETYRQRIRNFFDDE-DHNVITAIVGQMEYLRMLTHAF 562 (780)
T ss_dssp --ECCHHHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGTTCC-CHHHHHHHHHHHHHHHTTCSTT
T ss_pred --ECCHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHhchHHH
Confidence 67777884 345 23466655 68888999888888777778889999885 6999999999998775431111
Q ss_pred cc--HHHHHHHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhcC-ChhHHHHHHHH
Q 003805 726 AG--LLHLVKFYKSRRFDENIGLPRPNDFRDFSEYFVLEVIALRLFHM-PLPWLELLTTK 782 (794)
Q Consensus 726 ~g--~~~L~~~f~~~~~~~~~~i~~~n~f~~~~~y~~~kai~~a~~~~-~~~~~~~~~~~ 782 (794)
.. ...+...|++.- ++ .+...=.++..|..++|.. ..+|++ +...
T Consensus 563 ~~~~~~l~~~~~~~l~-------~~----~~~~~~~~r~~~~~~a~~~~~~~~~~-a~~~ 610 (780)
T 1z5h_A 563 DDDARAFCRSRMQFLT-------GK----QDENLKIALGRVSRLYVMVDESYAEE-MSKL 610 (780)
T ss_dssp HHHHHHHHHHHHHHHT-------TC----CCHHHHHHHHHHHHHHHHHCHHHHHH-HHTT
T ss_pred HHHHHHHHHHHHHHcC-------CC----CChHHHHHHHHHHHHHHhcCCHHHHH-HHHH
Confidence 10 011222333321 22 4555555777777888887 789988 6543
No 6
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=100.00 E-value=3e-78 Score=724.17 Aligned_cols=566 Identities=16% Similarity=0.181 Sum_probs=425.8
Q ss_pred CCCCCCCeEEEEEEEEEEEeccCcEEEEEEEEEEEcCCcceEEEeccCceeeEEEEcCeee-eeeeCCCCcccchhhhhc
Q 003805 12 TKVENSGAVVRHQKLCLSIDMEKHQIYGYTELEIAVPDIGIVGLHAENLGIESVLVDGEPT-EFEYYPHNHQNVENEKRW 90 (794)
Q Consensus 12 ~~~~~~~~~~~hy~l~L~id~~~~~~~G~v~I~i~~~~~~~I~L~~~~l~I~~V~v~g~~~-~f~~~~~~~~~~~~~~~~ 90 (794)
+....+++.+.||+|++++++.+..++|.++|++...+++.|.||+++|+|.+|++||.++ .|...+
T Consensus 32 ~~y~~~~~~v~~~~L~l~l~~~~~~v~g~~~i~~~~~~~~~l~Ld~~~L~I~sV~v~G~~l~~y~~~~------------ 99 (891)
T 3b34_A 32 HDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVRHGASDAPLRLNGEDLKLVSVHINDEPWTAWKEEE------------ 99 (891)
T ss_dssp GGCCCCSEEEEEEEEEEECCSSCEEEEEEEEEEECSCTTCCEEEECSSCEEEEEEETTEECCSEEEET------------
T ss_pred hhCCCCCceeEEEEEEEEEECCceEEEEEEEEEEccCCCCEEEEECCCCEEEEEEEcCEEcceEEeeC------------
Confidence 3456788999999999999999999999999987654567899999999999999999887 555332
Q ss_pred cccCCCCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhhhhhhccccCCCCCccCCCceEEEEEEEEeccCcce
Q 003805 91 RSMVSSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQNVKLVRIDYWVEKVEVGI 170 (794)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~I~~~~~~~~~~~~~~~~~l~~~~~y~g~~~~~~~~~~~~y~~~~~~~G~ 170 (794)
..|+|. + ++ +.++++ +.|++.+... ....|+
T Consensus 100 ---------------------------~~L~I~---~---lp---~~~~l~--I~y~~~p~~~-----------~~l~Gl 130 (891)
T 3b34_A 100 ---------------------------GALVIS---N---LP---ERFTLK--IINEISPAAN-----------TALEGL 130 (891)
T ss_dssp ---------------------------TEEEEC---S---CC---SEEEEE--EEEEECGGGC-----------CSCCEE
T ss_pred ---------------------------CEEEEE---e---CC---CeEEEE--EEEEEeeccc-----------CCCceE
Confidence 135663 0 11 012222 2333322110 011355
Q ss_pred EeeeceEeeccccCCcceEEeecCCCCCeeEEEEEEEEeCC-e-EEEEcCceeeeeeccCCCCceEEEEecCCCCcceeE
Q 003805 171 HFDGNALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQN-L-IAVSAGSLLYQVLSKDDPPRKTYVYRLDVPVSAKWI 248 (794)
Q Consensus 171 ~f~~~~~~T~~ep~~Ar~wFPC~D~p~~katf~l~i~~p~~-~-~avsng~l~~~~~~~~~~~~~~~~f~~t~p~s~yli 248 (794)
++.+.+++|||||.+||+||||+|+|+.||+|+++|++|++ | +++|||+++++.. .++++++++|..++|||+|++
T Consensus 131 y~s~~~~~Tq~Ep~~AR~~fPc~DeP~~kAtf~itI~~p~~~y~~alSNg~l~~~~~--~~~g~~~~~f~~t~pmstYL~ 208 (891)
T 3b34_A 131 YQSGDALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGNRVAQGE--LENGRHWVQWQDPFPKPCYLF 208 (891)
T ss_dssp EEETTEEEEECTTTTGGGTSSBCCSTTCCEEEEEEEEEETTTCCEEEESSEEEEEEE--CSTTEEEEEEEEEEEECGGGC
T ss_pred EEeCCEEEeccccCCCCccccCCCCcccceEEEEEEEeccccceEEEeCCcccccee--ecCCeEEEEEEeCCCccceee
Confidence 54456789999999999999999999999999999999997 6 9999999987653 246788999999999999999
Q ss_pred EEEEeeceEeecC----C--CCcEEEEEcCCchhHHHHHHHHHHHHHHHHHHHcCCCCCCCCccEEEECCCCcccccccc
Q 003805 249 TLAVAPFEVLPDH----H--QSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFLAPEMAVSSSTFG 322 (794)
Q Consensus 249 afavG~f~~~~~~----~--~~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~vp~~~~~~~~~~g 322 (794)
||+||+|+.+++. . +.++++|++|+..+.++++++.++++++|||++||+||||++|++|++|++..++||+|
T Consensus 209 A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~al~~~~~~l~~~e~~fG~pYP~~k~diVavPdf~~GaMEn~- 287 (891)
T 3b34_A 209 ALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENK- 287 (891)
T ss_dssp CEEEECCEEEEEEEECTTCCEEEEEEEECTTCGGGCHHHHHHHHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCT-
T ss_pred EEEeccceEEeeeeeccCCCceEEEEEeccCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCcCccccC-
Confidence 9999999998752 2 25799999999999999999999999999999999999999999999999888999999
Q ss_pred cchhhh-ccccccCcccch-hhh-hHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHHhCchhHHHHHH
Q 003805 323 AAMGIF-SSQILYDEKVID-QAI-DTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEARYRRY 399 (794)
Q Consensus 323 agl~~~-~~~lL~~~~~~~-~~~-~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EG~A~y~~~~~~~~~~G~~~~~~~~~ 399 (794)
||++| +..+|+++.... ... ....+||||+|||||||+|||+||+|+|||||||+|++.+++++..|....++...
T Consensus 288 -GLitf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHqWFGNlVT~~~W~dlWLnEGFAtY~e~~~~~~~~~~~~~~~~~~ 366 (891)
T 3b34_A 288 -GLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNV 366 (891)
T ss_dssp -TEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred -ceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhCCCCcccchhhceehHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 68888 456888776433 222 23468999999999999999999999999999999999999988877554333222
Q ss_pred HHhcchhhhccCCCcccCCCCccccCCC---CcccccccceehhhHHHHHHHHHHhhChHHHHHHHHHHHHhhhcCCCCC
Q 003805 400 KANCAVCKADDSGATALSSSASCKDLYG---TQCIGIFGKIRSCKSVAILQMLEKQMGSNFFRKILQNIISRAQGASPVR 476 (794)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~f~~i~Y~Kg~~vl~mLe~~lG~e~F~~~L~~yl~~~~~~~~~~ 476 (794)
..........+.+ +..+++.+ .++.+.|+.++|.||++|||||+..||++.|+++|+.|++++++++
T Consensus 367 ~~l~~~~~~~D~~-------~~~~Pi~~~~~~~i~~~f~~i~Y~KGa~VLrML~~~lG~e~F~~gLr~Yl~~~~~~~--- 436 (891)
T 3b34_A 367 RTMRGLQFAEDAS-------PMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSA--- 436 (891)
T ss_dssp HHHHHTHHHHHTS-------TTCCCSSCSEESCGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEE---
T ss_pred HHHHHhhhhhhcc-------ccCCCCccccccccccccccchhhHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCCC---
Confidence 1111100111211 11222321 3455678899999999999999999999999999999999999985
Q ss_pred CCCHHHHHHHHHHhcCCCcccHHhHHhhhccCCCceEEEEEEEEecCCcEEEEEEEeecCCCCCCCCccccCCCCCCCCC
Q 003805 477 TLSTKEFRHFANKVGNLERPFLKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRD 556 (794)
Q Consensus 477 ~~st~~f~~~~e~~~~~~~~dl~~f~~~Wv~~~G~P~l~v~~~~n~k~~~v~l~i~q~~~~~~~~~~~~~~~~~~~~~~~ 556 (794)
++++||++.+++++| .||++ |++|++++|+|+++|+..|+.+++.++++++|..... + ...
T Consensus 437 -att~Df~~ale~~sg---~dL~~-f~~W~~q~G~P~l~V~~~~~~~~~~~~ltl~Q~~~~~-----------~---~~~ 497 (891)
T 3b34_A 437 -ATCDDFVQAMEDASN---VDLSH-FRRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTPAT-----------P---DQA 497 (891)
T ss_dssp -ECHHHHHHHHHHHHC---CCCTT-TTHHHHCCSCCEEEEEEEEETTTTEEEEEEEEECCCB-----------T---TBS
T ss_pred -CCHHHHHHHHHHHhC---CCHHH-HHHHHcCCCCceEEEEEEeecCCCEEEEEEEEecCCC-----------C---CCC
Confidence 799999999999874 57888 5799999999999999999877777777777754211 0 011
Q ss_pred CCCCCccceEEEEeccCCcccccccccCCCc-ceEEEeeecccchhhhhcCCCCCCCCCCCCCCCCcccccccccCCCCC
Q 003805 557 GDIGWPGMMSIRVHELDGMYDHPILPMAGDA-WQLLEIQCHSKLAARRALKPKKGSKPDGCDDNGDAVAGLDMRSSMESP 635 (794)
Q Consensus 557 ~~~~~~~pltiri~e~dg~~eh~~~~~~~~~-~~~~~i~~~~k~~~~r~~k~~~~~~~~~~~~~~d~~~~~d~~~~~~~~ 635 (794)
....|++|+++.+.+.+|.. +.+. +.+.. ..++.+. ++ +.... +.. .+ .
T Consensus 498 ~~~~~~iPi~v~l~~~~G~~-~~~~-~~~~~~~~~~~l~--~~------------------~~~~~-~~~------v~-~ 547 (891)
T 3b34_A 498 EKQPLHIPFAIELYDNEGKV-IPLQ-KGGHPVNSVLNVT--QA------------------EQTFV-FDN------VY-F 547 (891)
T ss_dssp CCCCCCEEEEEEEECTTSCB-CCCE-ETTEECCSEEEEC--SS------------------EEEEE-ECC------CC-S
T ss_pred CCceEEEEEEEEEEcCCCCc-cccc-ccccccceEEEec--CC------------------cEEEE-Ecc------CC-C
Confidence 23479999999999888862 1110 01100 0011110 00 00000 000 11 1
Q ss_pred eeEEEecCCCceeEEEeccCchHHHHHHHcccCChHHHHHHHHHHHcCC--------------CCchhHHhHHHHhhccC
Q 003805 636 LSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVAQAQAIAALEALP--------------HLSFNVVNTLNNFLSDS 701 (794)
Q Consensus 636 ~~wIr~D~~~~~~~~v~~~~~~~m~~~qL~~d~dv~aq~~a~~~l~~~~--------------~~~~~~~~~L~~~l~~~ 701 (794)
--||++|+++.++++|++++++++|+.||++|+|+++|.+|++.|++.. ..+...+.++..+|.|+
T Consensus 548 ~P~~~l~~~~s~~~~v~~~~~~~~l~~~l~~d~d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 627 (891)
T 3b34_A 548 QPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDE 627 (891)
T ss_dssp CCEEEESTTCCSSCEEECCCCHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCS
T ss_pred CCcEEEcCCCcceEEEeCCCCHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHhhhcCCCcCccHHHHHHHHHHhcCC
Confidence 2389999999999999999999999999999999999999998887531 11344667777777764
No 7
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=100.00 E-value=1.4e-74 Score=694.95 Aligned_cols=579 Identities=15% Similarity=0.131 Sum_probs=424.6
Q ss_pred CCCCeEEEEEEEEEEEeccCcEEEEEEEEEEEcCCcceEEEeccCceeeEEEEcCeeeeeeeCCCCcccchhhhhccccC
Q 003805 15 ENSGAVVRHQKLCLSIDMEKHQIYGYTELEIAVPDIGIVGLHAENLGIESVLVDGEPTEFEYYPHNHQNVENEKRWRSMV 94 (794)
Q Consensus 15 ~~~~~~~~hy~l~L~id~~~~~~~G~v~I~i~~~~~~~I~L~~~~l~I~~V~v~g~~~~f~~~~~~~~~~~~~~~~~~~~ 94 (794)
..+++.+.||+|++++++.+..++|.++|+.. .+++.|.||+++ +|++|++||+++.|...+.
T Consensus 12 ~~~~~~v~~~~L~l~l~~~~~~v~g~~~i~~~-~~~~~i~Ld~~~-~I~sv~v~g~~~~~~~~~~--------------- 74 (867)
T 2gtq_A 12 QTPAYHILKTDLHFDINEPQTVVKSRLTVEPQ-RVGEPLVLDGSA-KLLSVKINGAAADYVLEGE--------------- 74 (867)
T ss_dssp CCCSEEEEEEEEEEEECSSCEEEEEEEEEEES-STTSCEEEECCS-EEEEEEETTEECCCEEETT---------------
T ss_pred CCCCCceeEEEEEEEEECCcEEEEEEEEEEEe-CCCCEEEEecCC-CEEEEEECCeecceEeeCC---------------
Confidence 34678999999999999999999998888754 236789999999 9999999998876654421
Q ss_pred CCCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhhhhhhccccCCCCCccCCCceEEEEEEEEeccCcceEeee
Q 003805 95 SSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQNVKLVRIDYWVEKVEVGIHFDG 174 (794)
Q Consensus 95 ~~~~~~~~~~~~~~~~~l~~~~~~~L~I~~~~~~~~~~~~~~~~~l~~~~~y~g~~~~~~~~~~~~y~~~~~~~G~~f~~ 174 (794)
.|.|. + ++.+ .+++. +.|++.+..+ .+..|+++.+
T Consensus 75 ------------------------~L~I~---~---lp~g--~~~l~--I~y~~~p~~~-----------~~~~Gly~s~ 109 (867)
T 2gtq_A 75 ------------------------TLTIA---G---VPSE--RFTVE--VETEILPAEN-----------KSLMGLYASG 109 (867)
T ss_dssp ------------------------EEEES---C---CCSS--CEEEE--EEEEECGGGC-----------CSCSEEEEET
T ss_pred ------------------------EEEEE---e---cCCC--cEEEE--EEEEEeccCC-----------CCCcEEEEEC
Confidence 35553 0 1111 12222 2232222110 1123555445
Q ss_pred ceEeeccccCCcceEEeecCCCCCeeEEEEEEEEeCC-e-EEEEcCceeeeeeccCCCCceEEEEecCCCCcceeEEEEE
Q 003805 175 NALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQN-L-IAVSAGSLLYQVLSKDDPPRKTYVYRLDVPVSAKWITLAV 252 (794)
Q Consensus 175 ~~~~T~~ep~~Ar~wFPC~D~p~~katf~l~i~~p~~-~-~avsng~l~~~~~~~~~~~~~~~~f~~t~p~s~yliafav 252 (794)
.+++|||||.+||+||||+|+|+.||+|+++|++|++ | +++|||+++++.. .++++++++|+.++|||+|++||+|
T Consensus 110 ~~~~Tq~ep~~AR~~fPc~DeP~~katf~itIt~p~~~y~~~lSNg~l~~~~~--~~~g~~~~~f~~t~pmstYL~A~~v 187 (867)
T 2gtq_A 110 GNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDGGE--FSDGRHWVKWEDPFSKPSYLFALVA 187 (867)
T ss_dssp TEEEEECTTTTGGGTSCBCCSTTCCBEEEEEEEEETTTCCEEEESSEEEEEEE--CTTSEEEEEEECCSCBCGGGCCEEE
T ss_pred CEEEEeeccCCCceeeccCCCCCcceEEEEEEEEccccceEEEeCCcccccee--ecCCeEEEEEEeCCCccccceeEEE
Confidence 6889999999999999999999999999999999997 6 9999999987653 2467889999999999999999999
Q ss_pred eeceEeecC----C--CCcEEEEEcCCchhHHHHHHHHHHHHHHHHHHHcCCCCCCCCccEEEECCCCcccccccccchh
Q 003805 253 APFEVLPDH----H--QSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFLAPEMAVSSSTFGAAMG 326 (794)
Q Consensus 253 G~f~~~~~~----~--~~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~vp~~~~~~~~~~gagl~ 326 (794)
|+|+.+++. . +.++++|++|+..+.++++++.++++++|||++||+||||++|++|++|++..++|||+ ||+
T Consensus 188 G~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~al~~~~~~l~~~e~~fG~pYP~~k~d~Vavpdf~~GaMEn~--gli 265 (867)
T 2gtq_A 188 GDLAVTEDYFTTMSGRNVKIEFYTTEADKPKVGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENK--GLN 265 (867)
T ss_dssp ECCEEEEEEEECTTSCEEEEEEEECTTTGGGCHHHHHHHHHHHHHHHHHHCCCCCSSEEEEEEESSCSSSEECCT--TEE
T ss_pred ecceEeeeceeccCCCceEEEEEeccccHHHHHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCccccccC--Cce
Confidence 999998752 1 25799999999999999999999999999999999999999999999999888999999 688
Q ss_pred hh-ccccccCcccchh-hh-hHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHHhCchhHHHHHHHHhc
Q 003805 327 IF-SSQILYDEKVIDQ-AI-DTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEARYRRYKANC 403 (794)
Q Consensus 327 ~~-~~~lL~~~~~~~~-~~-~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EG~A~y~~~~~~~~~~G~~~~~~~~~~~~~ 403 (794)
+| ++.+|++++.... .. ....+||||+|||||||+|||+||+|+|||||||+|++.+++++..|....++.......
T Consensus 266 tf~e~~ll~~~~~~~~~~~~~i~~vIaHElAHqWfGnlVT~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~~~~~l~ 345 (867)
T 2gtq_A 266 IFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIENIRLLR 345 (867)
T ss_dssp EEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTBEESSGGGHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred eecccccccCcccCcHHHHHHHHHHHHHHHHHHhcCcEEEecccccccchHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 88 5568888765332 22 234589999999999999999999999999999999999999888775543332211111
Q ss_pred chhhhccCCCcccCCCCccccCC---CCcccccccceehhhHHHHHHHHHHhhChHHHHHHHHHHHHhhhcCCCCCCCCH
Q 003805 404 AVCKADDSGATALSSSASCKDLY---GTQCIGIFGKIRSCKSVAILQMLEKQMGSNFFRKILQNIISRAQGASPVRTLST 480 (794)
Q Consensus 404 ~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~f~~i~Y~Kg~~vl~mLe~~lG~e~F~~~L~~yl~~~~~~~~~~~~st 480 (794)
......+.+. ..+++. ..++...|+.++|.||++|||||+..||++.|+++|+.|+++|++++ +++
T Consensus 346 ~~~~~~D~~~-------~~~Pi~~~~~~~i~~~f~~i~Y~KGa~vl~mL~~~lG~e~F~~glr~Yl~~~~~~~----~t~ 414 (867)
T 2gtq_A 346 QHQFPEDAGP-------TAHPVRPASYEEMNNFYTMTVYEKGAEVVRMYHTLLGEEGFQKGMKLYFQRHDGQA----VTC 414 (867)
T ss_dssp HHHHHHHHST-------TCCCSSCSEESCGGGGCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE----ECH
T ss_pred HHhhhhccCc-------cCCCCcCCChhhhhhhccchhhhHHHHHHHHHHHHHCHHHHHHHHHHHHHHhCCCC----CCH
Confidence 1001111111 112222 13455678899999999999999999999999999999999999985 799
Q ss_pred HHHHHHHHHhcCCCcccHHhHHhhhccCCCceEEEEEEEEecCCcEEEEEEEeecCCCCCCCCccccCCCCCCCCCCCCC
Q 003805 481 KEFRHFANKVGNLERPFLKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDGDIG 560 (794)
Q Consensus 481 ~~f~~~~e~~~~~~~~dl~~f~~~Wv~~~G~P~l~v~~~~n~k~~~v~l~i~q~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (794)
+||++.+++++| .|+++| ++|++++|+|+++|+..+++ +.++++++|..... +. ......
T Consensus 415 ~Df~~~l~~~sg---~dl~~f-~~W~~q~G~P~l~v~~~~~~--~~~~l~l~Q~~~~~-----------~~---~~~~~~ 474 (867)
T 2gtq_A 415 DDFRAAMADANG---INLDQF-ALWYSQAGTPVLEAEGRLKN--NIFELTVKQTVPPT-----------PD---MTDKQP 474 (867)
T ss_dssp HHHHHHHHHHHT---CCCGGG-GHHHHCCSCCEEEEEEEEET--TEEEEEEEEECCCB-----------TT---BSCCCC
T ss_pred HHHHHHHHHHhC---CCHHHH-HHHhcCCCCceEEEEEEecC--CEEEEEEEEecCCC-----------CC---CCCCce
Confidence 999999999874 589885 79999999999999998853 45556666643210 00 012347
Q ss_pred CccceEEEEeccCCcccccccccCCCc--ceEEEeeecccchhhhhcCCCCCCCCCCCCCCCCcccccccccCCCCCeeE
Q 003805 561 WPGMMSIRVHELDGMYDHPILPMAGDA--WQLLEIQCHSKLAARRALKPKKGSKPDGCDDNGDAVAGLDMRSSMESPLSW 638 (794)
Q Consensus 561 ~~~pltiri~e~dg~~eh~~~~~~~~~--~~~~~i~~~~k~~~~r~~k~~~~~~~~~~~~~~d~~~~~d~~~~~~~~~~w 638 (794)
|++|+++.+...+|.. +... +.+.. ...+.+. .+. + . .. +.. . ..--|
T Consensus 475 ~~iPi~~~~~~~~g~~-~~~~-~~~~~~~~~~~~l~--~~~-----~---~----------~~-~~~------~-~~~p~ 524 (867)
T 2gtq_A 475 MMIPVKVGLLNRNGEA-VAFD-YQGKRATEAVLLLT--EAE-----Q---T----------FL-LEG------V-TEAVV 524 (867)
T ss_dssp CCEEEEEEEECTTCCB-CCEE-CSSCEESCEEEEEC--SSE-----E---E----------EE-EBC------C-CSCCE
T ss_pred EEEEEEEEEEcCCCcc-cccc-cccccccceEEEEc--CCc-----e---E----------EE-EeC------C-CCCCc
Confidence 9999999998877762 1110 11110 0011110 000 0 0 00 000 0 11237
Q ss_pred EEecCCCceeEEEeccCchHHHHHHHcccCChHHHHHHHHHHHcC-----------CCC---chhHHhHHHHhhccCcch
Q 003805 639 IRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVAQAQAIAALEAL-----------PHL---SFNVVNTLNNFLSDSKAF 704 (794)
Q Consensus 639 Ir~D~~~~~~~~v~~~~~~~m~~~qL~~d~dv~aq~~a~~~l~~~-----------~~~---~~~~~~~L~~~l~~~~~f 704 (794)
+.+|+++....+|++++++.+|..+|.+|.|.++|.+|++.|++. +.. ...++.++..++.|+.--
T Consensus 525 ~~l~r~fs~~~~l~~~~~~~~l~~l~~~~~d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 604 (867)
T 2gtq_A 525 PSLLRGFSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTLYRRAVAANLATLSDGVELPKHEKLLAAVEKVISDDLLD 604 (867)
T ss_dssp EEESTTCCSSCEEECCCCHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSSC
T ss_pred eEecCCCCccEEEECCCCHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHhcCcCCC
Confidence 999999999999999999999999999999999999886555431 111 234566677777676546
Q ss_pred hHHHHHHHH--HHHhhcc
Q 003805 705 WRVRIEAAY--ALANTAS 720 (794)
Q Consensus 705 ~~VR~~Aa~--~L~~~~~ 720 (794)
+.|+.++.. .++.++.
T Consensus 605 ~~~~a~~l~lp~~~~l~~ 622 (867)
T 2gtq_A 605 NAFKALLLGVPSEAELWD 622 (867)
T ss_dssp HHHHHHHTCCCCHHHHTT
T ss_pred HHHHHHHhcCCCHHHHHh
Confidence 888888876 4554443
No 8
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=100.00 E-value=1.9e-72 Score=657.34 Aligned_cols=451 Identities=17% Similarity=0.253 Sum_probs=349.2
Q ss_pred CeEEEEEEEEEEEeccCcEEEEEEEEEEEc-CC-cceEEEeccCceeeEEEEcCeeeeeeeCCCCcccchhhhhccccCC
Q 003805 18 GAVVRHQKLCLSIDMEKHQIYGYTELEIAV-PD-IGIVGLHAENLGIESVLVDGEPTEFEYYPHNHQNVENEKRWRSMVS 95 (794)
Q Consensus 18 ~~~~~hy~l~L~id~~~~~~~G~v~I~i~~-~~-~~~I~L~~~~l~I~~V~v~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 95 (794)
-+++.||+|+|++|+++++|+|.|+|++.+ .+ ++.|.||+++|+|++|+|||.+++|........
T Consensus 13 ~~rv~Hy~L~l~vD~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~L~I~~V~v~g~~~~~~~~~~~~~------------- 79 (608)
T 3u9w_A 13 VCRTKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVKYALGERQSY------------- 79 (608)
T ss_dssp TEEEEEEEEEEEEETTTTEEEEEEEEEEEECSTTEEEEEEEESSCEEEEEEETTEECCEEECCCCGG-------------
T ss_pred CCCceEEEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEECCEEcceeccccccc-------------
Confidence 468999999999999999999999999986 33 689999999999999999999988875532100
Q ss_pred CCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhhhhhhccccCCCCCccCCCceEEEEEEEEeccCcceEeeec
Q 003805 96 SPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQNVKLVRIDYWVEKVEVGIHFDGN 175 (794)
Q Consensus 96 ~~~~~~~~~~~~~~~~l~~~~~~~L~I~~~~~~~~~~~~~~~~~l~~~~~y~g~~~~~~~~~~~~y~~~~~~~G~~f~~~ 175 (794)
....|.|.++.+ ++.+. .+.+.+.|+|.+... |+....+ ....|- ..+
T Consensus 80 --------------------~~~~l~I~l~~~---l~~g~---~~~l~I~y~~~~~~~-~~~~~~~---~~~~g~--~~~ 127 (608)
T 3u9w_A 80 --------------------KGSPMEISLPIA---LSKNQ---EIVIEISFETSPKSS-ALQWLTP---EQTSGK--EHP 127 (608)
T ss_dssp --------------------GCEEEEEEEEEE---ECTTC---EEEEEEEEECCTTCT-TEEEECG---GGSSSS--SSC
T ss_pred --------------------cCceEEEEcCCC---CCCCC---EEEEEEEEEEEcCCC-ceeeecc---cccCCC--cce
Confidence 011366765431 22221 222335666665442 2221111 111221 246
Q ss_pred eEeeccccCCcceEEeecCCCCCeeEEEEEEEEeCCeEEEEcCceeeeeeccCCCCceEEEEecCCCCcceeEEEEEeec
Q 003805 176 ALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQNLIAVSAGSLLYQVLSKDDPPRKTYVYRLDVPVSAKWITLAVAPF 255 (794)
Q Consensus 176 ~~~T~~ep~~Ar~wFPC~D~p~~katf~l~i~~p~~~~avsng~l~~~~~~~~~~~~~~~~f~~t~p~s~yliafavG~f 255 (794)
+++|||||.+||+||||+|+|+.||||+++|++|++++|+|||.+.++...+.++++++++|..++|||+|++||+||+|
T Consensus 128 ~~~Tq~ep~~AR~~fPc~D~P~~Katf~i~I~~p~~~~alsng~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f 207 (608)
T 3u9w_A 128 YLFSQCQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVGAL 207 (608)
T ss_dssp EEEECCTTTTGGGTSCBCCSTTCCEEEEEEEEEETTSEEEESSEEEEEEECTTCTTEEEEEEEEEEEECGGGCCEEEESC
T ss_pred EEEEcccCCCCCEEEEecCccceeEEEEEEeeCCcceeeeeeccccceeeccCCCCeEEEEEEecCCcccEEEEEEEeee
Confidence 89999999999999999999999999999999999999999999987766556778999999999999999999999999
Q ss_pred eEeecCCCCcEEEEEcCCchhHHHHHHHHHHHHHHHHHHHcCCCCCCCCccEEEE-CCCCcccccccccchhhhcccccc
Q 003805 256 EVLPDHHQSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFL-APEMAVSSSTFGAAMGIFSSQILY 334 (794)
Q Consensus 256 ~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~v-p~~~~~~~~~~gagl~~~~~~lL~ 334 (794)
+..+. +..+.+|+.|+..+.+.++++.+.++|++||+++| +|||+++++|++ |++..++|||+ ||+++++.+|.
T Consensus 208 ~~~~~--~~~~~v~~~p~~~~~~~~~~~~~~~~l~~~e~~~g-~Yp~~~~~~vv~~p~f~~GgMEn~--gl~~~~~~~l~ 282 (608)
T 3u9w_A 208 ESRQI--GPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENP--CLTFVTPTLLA 282 (608)
T ss_dssp EEEEE--ETTEEEEECHHHHHHHHHHTTTHHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCT--TEEEECGGGCC
T ss_pred eeEec--CCceEEEeChhhHHHHHHHHHHHHHHHHhHHhcCC-CCCchhhceeeecccccchhhhcC--cceeeeeeeec
Confidence 98764 56789999999999999999999999999999998 999999999988 56667899998 68888776665
Q ss_pred CcccchhhhhHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHHhCchhHHHHHHHHhcchhhh-c-cCC
Q 003805 335 DEKVIDQAIDTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEARYRRYKANCAVCKA-D-DSG 412 (794)
Q Consensus 335 ~~~~~~~~~~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EG~A~y~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~-~~~ 412 (794)
.+... ..+||||||||||||+||++||+|+|||||||+|++.+++++++|.+................ + ...
T Consensus 283 ~~~~~------~~viaHElAHqWfGnlVT~~~W~d~WLnEGfAty~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (608)
T 3u9w_A 283 GDKSL------SNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGE 356 (608)
T ss_dssp SSSTT------THHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred ccchh------HHHHHHHhhhhhhcCcCccccccchhHHHhHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHhhhhc
Confidence 54322 347999999999999999999999999999999999999999999876533222111111100 1 011
Q ss_pred CcccCCCCccccCCCCcccccccceehhhHHHHHHHHHHhhC-hHHHHHHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhc
Q 003805 413 ATALSSSASCKDLYGTQCIGIFGKIRSCKSVAILQMLEKQMG-SNFFRKILQNIISRAQGASPVRTLSTKEFRHFANKVG 491 (794)
Q Consensus 413 ~~~l~~~~~~~~~~~~~~~~~f~~i~Y~Kg~~vl~mLe~~lG-~e~F~~~L~~yl~~~~~~~~~~~~st~~f~~~~e~~~ 491 (794)
..++... ..+....+....|+.++|.||++|||||++.|| ++.|+++|+.|++++++++ ++++||++.+++++
T Consensus 357 ~~p~~~~--~~~~~~~~~~~~f~~i~Y~KGa~vL~mL~~~lG~~~~F~~~lr~Yl~~~~~~~----~tt~Df~~~l~~~~ 430 (608)
T 3u9w_A 357 THPFTKL--VVDLTDIDPDVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKS----ITTDDWKDFLYSYF 430 (608)
T ss_dssp TCGGGSS--SCCCTTCCHHHHCSSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEE----ECHHHHHHHHHHHT
T ss_pred cCCcccc--ccccccCChhhcccHHHHhHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCC----CCHHHHHHHHHHHh
Confidence 1121111 111112223457999999999999999999998 6889999999999999985 79999999999887
Q ss_pred CCCcccHHhH----HhhhccCCCceEEEEEEEEecCCcEEEEEEEe
Q 003805 492 NLERPFLKEF----FPRWVGTCGCPVLRMGFSYNKRKNIVELAVLR 533 (794)
Q Consensus 492 ~~~~~dl~~f----~~~Wv~~~G~P~l~v~~~~n~k~~~v~l~i~q 533 (794)
+ .+++.+ |++|++++|+|+++|+++++..+..++|+|++
T Consensus 431 ~---~~~~~~~~~~~~~W~~~~G~P~v~v~~d~~~~~~~~~l~q~~ 473 (608)
T 3u9w_A 431 K---DKVDVLNQVDWNAWLYSPGLPPIKPNYDMTLTNACIALSQRW 473 (608)
T ss_dssp G---GGHHHHHTSCHHHHHHCCSSCSSCCCCCCTTTHHHHHHHHHH
T ss_pred c---cccchhhHHHHHHHhcCCCCCceeeeeccccccceeeHHhHH
Confidence 4 467766 99999999999999988776656666666554
No 9
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=100.00 E-value=2.1e-66 Score=605.97 Aligned_cols=432 Identities=18% Similarity=0.268 Sum_probs=330.6
Q ss_pred cCCC--CCCCCeEEEEEEEEEEEeccCcEEEEEEEEEEEcC-C-cceEEEeccCceeeEEEE-c--C--eeeeeeeCCCC
Q 003805 10 EETK--VENSGAVVRHQKLCLSIDMEKHQIYGYTELEIAVP-D-IGIVGLHAENLGIESVLV-D--G--EPTEFEYYPHN 80 (794)
Q Consensus 10 ~~~~--~~~~~~~~~hy~l~L~id~~~~~~~G~v~I~i~~~-~-~~~I~L~~~~l~I~~V~v-~--g--~~~~f~~~~~~ 80 (794)
.+|. +...+++|.||+|+|++|+++.+|+|.|+|++.+. + ++.|.||+++|+|.+|++ + | +++.|.+.+..
T Consensus 15 ~d~~~~~~p~~~~~~hy~l~l~~d~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~l~I~~v~v~~~~g~~~~~~~~~~~~~ 94 (605)
T 3cia_A 15 TDAYTYANYDQVKATHVYLDLNVDFDKKSLSGFAELSLDWFTDNKAPLILDTRDLVIHRVMAKNSQGQWVKVNYDLAKRD 94 (605)
T ss_dssp CCSSCCCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECCSSCCCEEEBCSSEEEEEEEEECTTCCEEEECEEEEEEC
T ss_pred CCcccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEcCCCCccceeEEecCcc
Confidence 4553 33468999999999999999999999999999863 3 789999999999999999 8 8 77777654210
Q ss_pred cccchhhhhccccCCCCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhhhhhhccccCCCCCccCCCceEEEEE
Q 003805 81 HQNVENEKRWRSMVSSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQNVKLVRID 160 (794)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~I~~~~~~~~~~~~~~~~~l~~~~~y~g~~~~~~~~~~~~ 160 (794)
.. ....|.|.++ . +.+++ .+.|+|.+.. .|+
T Consensus 95 ~~---------------------------------~~~~l~i~l~-------~--~~~~l--~i~y~~~~~~-~gl---- 125 (605)
T 3cia_A 95 DV---------------------------------LGSKLTINTP-------L--NAKKV--RVYYNSTEKA-TGL---- 125 (605)
T ss_dssp SS---------------------------------SCEEEEECCC-------T--TCSEE--EEEEEECTTC-TTE----
T ss_pred cc---------------------------------CCCeEEEEeC-------C--ceEEE--EEEEEEecCC-Cce----
Confidence 00 0113666442 0 11233 3567776543 232
Q ss_pred EEEec-cCcceEeeeceEeeccccCCcceEEeecCCCCCeeEEEEEEEEeCCeEEEEcCceeeeeeccCCCCceEEEEec
Q 003805 161 YWVEK-VEVGIHFDGNALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQNLIAVSAGSLLYQVLSKDDPPRKTYVYRL 239 (794)
Q Consensus 161 y~~~~-~~~G~~f~~~~~~T~~ep~~Ar~wFPC~D~p~~katf~l~i~~p~~~~avsng~l~~~~~~~~~~~~~~~~f~~ 239 (794)
+++.. ..+|- ..++++|||||.+||+||||+|+|+.||+|+++|++|++|+|+|||...... ..++ +++|..
T Consensus 126 ~~~~~~~~~g~--~~~~~~Tq~ep~~AR~~fPc~D~P~~katf~i~i~~p~~~~alsng~~~~~~---~~~~--~~~f~~ 198 (605)
T 3cia_A 126 QWLSAEQTAGK--EKPFLFSQNQAIHARSWIPIQDTPSVRVTYTARITTDKDLLAVMSANNEPGT---ERDG--DYFFSM 198 (605)
T ss_dssp EEECGGGSSSS--SSCEEEECCTTTTGGGTSCBCCCTTCCEEEEEEEECCTTCEEEESSEEC-------CCS--EEEEEE
T ss_pred EEecccccCCC--cccEEEecCcccChhhceecCCCcCceeEEEEEEEEcCCcEEEecCCcccee---cCCC--eEEEee
Confidence 22221 11221 2578899999999999999999999999999999999999999999654321 1222 789999
Q ss_pred CCCCcceeEEEEEeeceEeecCCCCcEEEEEcCCchhHHHHHHHHHHHHHHHHHHHcCCCCCCCCccEEEEC-CCCcccc
Q 003805 240 DVPVSAKWITLAVAPFEVLPDHHQSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFLA-PEMAVSS 318 (794)
Q Consensus 240 t~p~s~yliafavG~f~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~vp-~~~~~~~ 318 (794)
++|||+|++||+||+|+.++. +.++++|++|+..+.++++++.+.+++++||++|| +|||++|++|++| ++..++|
T Consensus 199 t~pmstYl~a~~vg~f~~~~~--g~~~~v~~~p~~~~~~~~~~~~~~~~l~~~e~~fG-~YP~~k~d~v~~p~~f~~GgM 275 (605)
T 3cia_A 199 PQAIPPYLIAIGVGDLEFKAM--SHQTGIYAESYILDAAVAEFDDTQAMIDKAEQMYG-KYRWGRYDLLMLPPSFPFGGM 275 (605)
T ss_dssp EEEECGGGCCEEEESCEEEES--SSSEEEEECSTTHHHHHHHSTTHHHHHHHHHHHHC-CCTTSCEEEEECCTTCSSSEE
T ss_pred CCCccceeEEEEEeeeeEecC--CCeEEEEeccChHHHHHHHHHHHHHHHHHHHHHhC-CCCCccccEEEECCccCCCcc
Confidence 999999999999999999875 45799999999999999999999999999999999 9999999999995 6667889
Q ss_pred cccccchhhhccccccCcccchhhhhHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHHhCchhHHHHH
Q 003805 319 STFGAAMGIFSSQILYDEKVIDQAIDTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEARYRR 398 (794)
Q Consensus 319 ~~~gagl~~~~~~lL~~~~~~~~~~~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EG~A~y~~~~~~~~~~G~~~~~~~~ 398 (794)
|++ |+++.+..+|.++.. ...+||||+|||||||+|||+||+|+|||||||+|++.+++++.+|.+..++..
T Consensus 276 En~--gltf~~~~ll~~~~~------~~~viaHElaHqWfGnlVT~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~ 347 (605)
T 3cia_A 276 ENP--RLSFITPTVVAGDKS------LVNLIAHELAHSWSGNLVTNESWRDLWLNEGFTSYVENRIMEAVFGTDRAVMEQ 347 (605)
T ss_dssp CCT--TEEEECGGGCCSSSC------STHHHHHHHHHTTBTTTEEESSTTSTHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred cCC--cEEEecchhccCcHH------HHHHHHHHHHHHhhccccccCcchHhHHHHHHHHHHHHHHHHHHcCchHHHHHH
Confidence 999 465446667765432 235899999999999999999999999999999999999999999987544432
Q ss_pred H---HHhcchhhhcc-CCCcccCCCCccccCCCCcccccccceehhhHHHHHHHHHHhhChHHHHHHHHHHHHhhhcCCC
Q 003805 399 Y---KANCAVCKADD-SGATALSSSASCKDLYGTQCIGIFGKIRSCKSVAILQMLEKQMGSNFFRKILQNIISRAQGASP 474 (794)
Q Consensus 399 ~---~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~f~~i~Y~Kg~~vl~mLe~~lG~e~F~~~L~~yl~~~~~~~~ 474 (794)
. ......+ ... ....++. .++.+.++...|+.+.|.||++|||||+..||++.|+++|+.|++++++++
T Consensus 348 ~~~~~~l~~~l-~~~~~~~~pl~-----~~~~~~~~~~~f~~i~Y~KGa~vl~mL~~~lG~e~F~~~lr~yl~~~~~~~- 420 (605)
T 3cia_A 348 ALGAQDLNAEI-LELDASDTQLY-----IDLKGRDPDDAFSGVPYVKGQLFLMYLEEKFGRERFDAFVLEYFDSHAFQS- 420 (605)
T ss_dssp HHHHHHHHHHH-HHSCTTTTSSS-----CCCTTCCTTTSCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTEE-
T ss_pred HHHHHHHHHHH-HhhccCCCCcc-----cCCCCCChhHhhCccchhHHHHHHHHHHHHhChHHHHHHHHHHHHHhCcCC-
Confidence 1 1111111 010 1111111 122223455689999999999999999999999999999999999999885
Q ss_pred CCCCCHHHHHHHHHHhcCCC-cccHHh-HHhhhccCCCceEEEEEE
Q 003805 475 VRTLSTKEFRHFANKVGNLE-RPFLKE-FFPRWVGTCGCPVLRMGF 518 (794)
Q Consensus 475 ~~~~st~~f~~~~e~~~~~~-~~dl~~-f~~~Wv~~~G~P~l~v~~ 518 (794)
++++||++.++++++.. ..+++. +|++|++++|+|++++.+
T Consensus 421 ---~t~~df~~~l~~~~~~~~~~~l~~~~~~~W~~~~G~P~~~~~~ 463 (605)
T 3cia_A 421 ---LGTDNFVKYLKANLTDKYPNIVSDNEINEWIFKAGLPSYAPQP 463 (605)
T ss_dssp ---ECHHHHHHHHHHTTTTTSTTSSCHHHHHHHHHSSSCCSSSCCC
T ss_pred ---CCHHHHHHHHHHHhccccccccchhhHHHHhcCCCCCceeccC
Confidence 79999999999987520 124555 799999999999988754
No 10
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=100.00 E-value=1.4e-66 Score=609.05 Aligned_cols=433 Identities=18% Similarity=0.252 Sum_probs=331.2
Q ss_pred cCCC-CCC-CCeEEEEEEEEEEEeccCcEEEEEEEEEEEc-CC----cceEEEeccCceeeEEEEcCeeeeeeeCCCCcc
Q 003805 10 EETK-VEN-SGAVVRHQKLCLSIDMEKHQIYGYTELEIAV-PD----IGIVGLHAENLGIESVLVDGEPTEFEYYPHNHQ 82 (794)
Q Consensus 10 ~~~~-~~~-~~~~~~hy~l~L~id~~~~~~~G~v~I~i~~-~~----~~~I~L~~~~l~I~~V~v~g~~~~f~~~~~~~~ 82 (794)
.+|. ..+ ..++|.||+|+|++|+++.+|+|.|+|++.+ .+ ++.|.||+++|+|++|+++|.++.|.+.+....
T Consensus 17 ~d~~~~~~p~~~~~~hY~L~l~~d~~~~~~~G~v~I~~~~~~~~~~~~~~i~Ld~~~l~I~~v~v~g~~~~~~~~~~~~~ 96 (632)
T 2xq0_A 17 YDQSTLSNYKDFAVLHTDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHIDGSKADFQIEQRKEP 96 (632)
T ss_dssp CCTTCCSCGGGEEEEEEEEEEEEETTTTEEEEEEEEEEEECC---CCCCEEEEBCSSEEEEEEEETTEECCEEECCCBTT
T ss_pred CCcccccCCCceeEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCcCcEEEEEccCCEEEEEEECCeecceEEcccccc
Confidence 3453 333 6899999999999999999999999999986 34 789999999999999999998888776532000
Q ss_pred cchhhhhccccCCCCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhhhhhhccccCCCCCccCCCceEEEEEEE
Q 003805 83 NVENEKRWRSMVSSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQNVKLVRIDYW 162 (794)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~I~~~~~~~~~~~~~~~~~l~~~~~y~g~~~~~~~~~~~~y~ 162 (794)
....|.|.++.+ + +.++ +.+.|+|.+... |+ ++
T Consensus 97 ---------------------------------~~~~l~I~l~~~------g-~~~~--l~I~Y~g~~~~~-gl----~~ 129 (632)
T 2xq0_A 97 ---------------------------------LGSRLVINNASC------N-DNFT--LNIQFRTTDKCT-AL----QW 129 (632)
T ss_dssp ---------------------------------TBCCEEEECCCS------S-SEEE--EEEEEEECTTCS-SE----EE
T ss_pred ---------------------------------cCcEEEEEecCC------C-CEEE--EEEEEeeecCcC-cc----ee
Confidence 012477766432 1 1223 335666665432 22 22
Q ss_pred Eec-cCcceEeeeceEeeccccCCcceEEeecCCCCCeeEEEEEEEEeCCeEEEEcCceeeeeeccCCCCceEEEEecCC
Q 003805 163 VEK-VEVGIHFDGNALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQNLIAVSAGSLLYQVLSKDDPPRKTYVYRLDV 241 (794)
Q Consensus 163 ~~~-~~~G~~f~~~~~~T~~ep~~Ar~wFPC~D~p~~katf~l~i~~p~~~~avsng~l~~~~~~~~~~~~~~~~f~~t~ 241 (794)
+.. ..+|- .++++|||||.+||+||||+|+|+.||+|+++|++| ++|++||.++.+.. . +..+++|+.++
T Consensus 130 ~~~~~~~g~---~~~~~Tq~ep~~AR~~fPc~D~P~~Katf~i~I~~p--~~vv~sg~~~~~~~---~-~~~~~~F~~t~ 200 (632)
T 2xq0_A 130 LNSKQTKGG---KPYVFSQLEAIHARSLFPCFDTPSVKSTFTASIESP--LPVVFSGIRIEDTS---K-DTNIYRFEQKV 200 (632)
T ss_dssp ECTTTSTTS---SCEEEECCTTTTGGGTSCBCCSTTCCEEEEEEEECS--SCEEESSEECCCC--------CEEEEEEEE
T ss_pred ecccccCCC---ceEEEeccccCCcceeeeecCCcccceEEEEEEEEc--hHHhccCcccccee---c-CCCeEEEEeCC
Confidence 221 11231 467899999999999999999999999999999999 99998887654432 1 22479999999
Q ss_pred CCcceeEEEEEeeceEeecCCCCcEEEEEcCCchhHHHHHHH-HHHHHHHHHHHHcCCCCCCCCccEEEEC-CCCccccc
Q 003805 242 PVSAKWITLAVAPFEVLPDHHQSLMSHICLPANVSKIHNTVE-FFHNAFSHYETYLDAKFPFGSYKQVFLA-PEMAVSSS 319 (794)
Q Consensus 242 p~s~yliafavG~f~~~~~~~~~~v~~~~~p~~~~~~~~~~~-~~~~~l~~~e~~~g~~YP~~k~~~V~vp-~~~~~~~~ 319 (794)
|||+|++||+||+|+..+. +..+++|++|+..+.+++++. .+.+++++||++|| ||||++|++|++| ++..++||
T Consensus 201 pmstYLva~~vg~f~~~~~--g~~~~v~~~p~~~~~~~~~~~~~~~~~l~~~e~~fG-pYP~~k~d~v~~pp~f~~GgME 277 (632)
T 2xq0_A 201 PIPAYLIGIASGDLSSAPI--GPRSTVYTEPFRLKDCQWEFENDVEKFIQTAEKIIF-EYEWGTYDILVNVDSYPYGGME 277 (632)
T ss_dssp EECGGGCCEEESSCEEEEE--ETTEEEEECHHHHHHHHHHHTTTHHHHHHHHHHHSC-CCCSSCCCEEECCTTCCSSEEC
T ss_pred ccchhheeeeEecceeecc--CCeeEEEEccchHHHHHHHHHHHHHHHHHHHHHhcc-cCCcccccEEEECCCCCCCccc
Confidence 9999999999999999875 457999999999899999998 99999999999999 9999999999995 66678899
Q ss_pred ccccchhhhccccccCcccchhhhhHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHHhCchhHHHHHH
Q 003805 320 TFGAAMGIFSSQILYDEKVIDQAIDTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEARYRRY 399 (794)
Q Consensus 320 ~~gagl~~~~~~lL~~~~~~~~~~~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EG~A~y~~~~~~~~~~G~~~~~~~~~ 399 (794)
++ ||++.+..+|.++.. ...+||||+|||||||+||++||+|+|||||||+|++.+++++.+|++.+++...
T Consensus 278 n~--glt~~~~~ll~~~~~------~~~viaHElAHqWfGnlVT~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~ 349 (632)
T 2xq0_A 278 SP--NMTFATPTLLAHDRS------NIDVIAHELAHSWSGNLVTNCSWNHFWLNEGWTVYLERRIIGAIHGEPTRHFSAL 349 (632)
T ss_dssp CT--TCEEECGGGCCSSSC------STHHHHHHHHHTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred cc--eEEEeeceeccCchh------HHHHHHHHHHHHHhcCCCccCCcchhhHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 99 565557777765432 2458999999999999999999999999999999999999999999876544322
Q ss_pred H---HhcchhhhccCCCcccCCCCccccCC-CCcccccccceehhhHHHHHHHHHHhhCh-HHHHHHHHHHHHhhhcCCC
Q 003805 400 K---ANCAVCKADDSGATALSSSASCKDLY-GTQCIGIFGKIRSCKSVAILQMLEKQMGS-NFFRKILQNIISRAQGASP 474 (794)
Q Consensus 400 ~---~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~f~~i~Y~Kg~~vl~mLe~~lG~-e~F~~~L~~yl~~~~~~~~ 474 (794)
. .....+ .......++.. ...++. +.++...|+.++|.||++|||||+..||+ +.|+++|+.|++++++++
T Consensus 350 ~~~~~l~~~l-~~~~~~~pl~~--l~~~~~~~~~~~~~f~~i~Y~KGa~vL~mL~~~lG~~e~F~~~Lr~Yl~~~~~~~- 425 (632)
T 2xq0_A 350 IGWSDLQNSI-DSMKDPERFST--LVQNLNDNTDPDDAFSTVPYEKGFNLLFHLETILGGKAEFDPFIRHYFKKFAKKS- 425 (632)
T ss_dssp HHHHHHHHHH-HTCSSHHHHTS--SSCCCCSSSCGGGGCSSHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHTTTEE-
T ss_pred HHHHHHHHHH-HhcccCCCCcc--cccCCCCCCChHHhccchhhHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhCcCC-
Confidence 1 111111 00001111110 001121 23455689999999999999999999999 999999999999999985
Q ss_pred CCCCCHHHHHHHHHHhcCCCcccHHh-HHhhhccCCCceEEEEE
Q 003805 475 VRTLSTKEFRHFANKVGNLERPFLKE-FFPRWVGTCGCPVLRMG 517 (794)
Q Consensus 475 ~~~~st~~f~~~~e~~~~~~~~dl~~-f~~~Wv~~~G~P~l~v~ 517 (794)
++++||++.++++++..+.+++. +|++|++++|+|+ .+.
T Consensus 426 ---~tt~Df~~~l~~~~~~~~~~l~~~~~~~W~~~~G~P~-~~~ 465 (632)
T 2xq0_A 426 ---LDTFQFLDTLYEFYPEKKEILDSVDWETWLYKPGMPP-RPH 465 (632)
T ss_dssp ---ECHHHHHHHHHHHCGGGHHHHHTSCHHHHHHCCSCCC-CCC
T ss_pred ---CCHHHHHHHHHHHhhhccccccHHHHHHHhcCCCCCC-CcC
Confidence 79999999999886421246777 7999999999999 654
No 11
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=99.91 E-value=7.3e-24 Score=244.44 Aligned_cols=312 Identities=9% Similarity=0.056 Sum_probs=193.4
Q ss_pred cceEEeecCCCCCeeEEEEEEEEeCC---eEEEEcCceeeeeeccCCCCceEEEEecCC----CCcceeEEEEEeeceEe
Q 003805 186 ARCWFPCIDDTTQRCCYDLEFTVSQN---LIAVSAGSLLYQVLSKDDPPRKTYVYRLDV----PVSAKWITLAVAPFEVL 258 (794)
Q Consensus 186 Ar~wFPC~D~p~~katf~l~i~~p~~---~~avsng~l~~~~~~~~~~~~~~~~f~~t~----p~s~yliafavG~f~~~ 258 (794)
..+.|.+++.- ...+++++|..|++ |.+.+..+.... ...+..+ |.... .-|| +.+|+|+..
T Consensus 108 ~~~~fly~~g~-~~~p~~~~i~~P~~~~~W~vaT~L~~~~~----~~~~~~~--f~a~~yd~LvDsP----v~~G~~~~~ 176 (597)
T 4fgm_A 108 NTSLCLAVEGQ-TDLPCELHLHAPPEAPLWKVATGMPRKSG----QPHSWGC--FRADNYDALIDYP----FLIGDLTIE 176 (597)
T ss_dssp HHHHCCEETTC-TTSCEEEEECCCTTCTTCEEEESSCBCSS----CTTSSEE--EEESSHHHHTTCC----EEEESCEEE
T ss_pred hhhhheeccCc-cCCcEEEEEECCCCCCcceEEecCCccCC----CCCcceE--EEcCCHHHHhcch----hcccCcEEE
Confidence 34556666653 56789999999999 998777764321 1112233 43221 1111 357888876
Q ss_pred ecCC-CCcEEEEEcCCchhHHHHHHHHHHHHHHHHHHHcCCCCCCCCccEEEE-CCCCcccccccccchhhhcccccc-C
Q 003805 259 PDHH-QSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFL-APEMAVSSSTFGAAMGIFSSQILY-D 335 (794)
Q Consensus 259 ~~~~-~~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~v-p~~~~~~~~~~gagl~~~~~~lL~-~ 335 (794)
+... +.++++...+......+..+..+.+++++++++|| +|||++|++++. +++..++||+.++.+++++...|. .
T Consensus 177 ~~~~~g~p~~l~v~~~~~~d~~~~~~~~~~~~~~~~~~fG-~yP~~~Y~fl~~~~~~~~GgmEh~~st~l~~~~~~l~~~ 255 (597)
T 4fgm_A 177 EFIAHGIKHSLVLSGRHYADTSRITADLAKICETQISLFE-EAPFQSYTFLTMVVGNGFGGLEHRNSTALLCSRKDLISA 255 (597)
T ss_dssp EEEETTEEEEEEEESSCCCCHHHHHHHHHHHHHHHHHHHT-SCSCSEEEEEEEEESSCCEEEECSSEEEEEEEGGGSCCT
T ss_pred EeccCCeEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhC-CCCCCceEEEEEccCCCCcccccCCceEEEeCchhcccc
Confidence 6543 45666544433333457888899999999999999 999999999864 234456788775444445433221 1
Q ss_pred cc-cchhhh-hHHHHHHHHHHHHhhccccCC-----------CCCCchHHHHHHHHHHHHHHHHHHhCchhHHHHH--HH
Q 003805 336 EK-VIDQAI-DTSIKLSFALARQWFGVYITP-----------ELPNDEWLLDGLAGFLTDSFIKKFLGNNEARYRR--YK 400 (794)
Q Consensus 336 ~~-~~~~~~-~~~~~iaHElAHQWfG~~Vt~-----------~~w~d~WL~EG~A~y~~~~~~~~~~G~~~~~~~~--~~ 400 (794)
.. ..+..+ ....+++||++|||||+.|+| ++|+++||+||||+|++.+++.+.-......|.. ..
T Consensus 256 ~~~~~~~~~~~~~~liaHE~~H~W~g~~i~p~~~~~~d~~~~~~~~~lWl~EG~t~Y~~~l~~~r~G~~~~~~~~~~l~~ 335 (597)
T 4fgm_A 256 HQYEMNDNYQTFLSLCCHEYFHSWNIKTLKPKAFLPYQLEKESYTEQLWFYEGMTSYFDDYLLHTSGIIDEKRYLKLLGD 335 (597)
T ss_dssp TCCSCCHHHHHHHHHHHHHHHHTTBTTTBCBGGGSSCCCSSCCCCSTHHHHTHHHHHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred ccccchhhhhchhhhHhhhhheeecccccccccccccccccccccccchhhhhHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 11 111122 234589999999999988765 4568999999999999999987643222222221 11
Q ss_pred HhcchhhhccCCCcccC-CCC-ccccCC-CCcccccccceehhhHHHHHHHHHHhhCh-----HHHHHHHHHHHHhhhcC
Q 003805 401 ANCAVCKADDSGATALS-SSA-SCKDLY-GTQCIGIFGKIRSCKSVAILQMLEKQMGS-----NFFRKILQNIISRAQGA 472 (794)
Q Consensus 401 ~~~~~~~~~~~~~~~l~-~~~-~~~~~~-~~~~~~~f~~i~Y~Kg~~vl~mLe~~lG~-----e~F~~~L~~yl~~~~~~ 472 (794)
....+.........++. ++. .....+ +.+-........|.||++|++||+..|++ +.|+++|+.|++++...
T Consensus 336 ~i~~~~~~~gr~~~sl~~ss~~aw~~~yr~~~n~~n~~~s~Y~KGalv~~~LD~~lR~~s~g~~sldd~mr~l~~~~~~~ 415 (597)
T 4fgm_A 336 TLSRVERGAGQYQQSVTESSFLAWTKFYQQNENAPNSIVSYYAKGALIALSLDLMLRLQSDHKLTLARVMKELWHEFGKT 415 (597)
T ss_dssp HHHHHHHSGGGGTCCHHHHHHTCCCCCTTCCTTHHHHCCCTTHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHTTT
T ss_pred HHHHhhcCCCccccChHHcCchhhhccccCCcccCCcccccchHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHhCcC
Confidence 11111100000000110 000 000001 01000011123599999999999988855 58999999999988642
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcccHHhHHhhhccCCCceEE
Q 003805 473 SPVRTLSTKEFRHFANKVGNLERPFLKEFFPRWVGTCGCPVL 514 (794)
Q Consensus 473 ~~~~~~st~~f~~~~e~~~~~~~~dl~~f~~~Wv~~~G~P~l 514 (794)
. ..+++++|.+++++++| .|+.+||++|+++++.|.+
T Consensus 416 ~--~~~t~~d~~~~~e~~sG---~dl~~ff~~~l~~t~~~p~ 452 (597)
T 4fgm_A 416 S--IGTADDTVINWLNQYPG---IDISDFLKDALYNKESLSL 452 (597)
T ss_dssp T--CCBCTTHHHHHHHTSTT---CCCHHHHHHHHHSCSCCCC
T ss_pred C--CCCCHHHHHHHHHHhcC---cCHHHHHHHHHhCCCCcch
Confidence 1 14789999999999874 6899999999999998644
No 12
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens}
Probab=99.00 E-value=2.9e-09 Score=118.62 Aligned_cols=206 Identities=11% Similarity=0.074 Sum_probs=131.2
Q ss_pred CceEEEEEEEEecCCcEEEEEEEeecCCCCCCCCccccCCCCCCCCCCCCCCccceEEEEeccCCcccccccccCCCcce
Q 003805 510 GCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDGDIGWPGMMSIRVHELDGMYDHPILPMAGDAWQ 589 (794)
Q Consensus 510 G~P~l~v~~~~n~k~~~v~l~i~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pltiri~e~dg~~eh~~~~~~~~~~~ 589 (794)
|||+|+|+.. ++.+.|+|+||..... .+ .+.+..|++|+++..... ++....++ .+. -
T Consensus 1 GyPvvtV~~~----~~~~~l~Q~RFl~~~~----------~~---~~~~~~W~IPl~~~~~~~-~~~~~~~l--~~~-~- 58 (419)
T 3rjo_A 1 GFPLITITVR----GRNVHMKQEHYMKGSD----------GA---PDTGYLWHVPLTFITSKS-DMVHRFLL--KTK-T- 58 (419)
T ss_dssp CEEEEEEEEE----TTEEEEEEEEEC-----------------------CCCCEEEEEEESSC-SSCEEEEE--CSS-E-
T ss_pred CCCEEEEEEC----CCEEEEEEeeccCCCC----------CC---CCCCeEEEEEEEEEeCCC-CccceEEE--ecC-c-
Confidence 9999999862 5688999999864211 00 012358999999976532 21111110 000 0
Q ss_pred EEEeeecccchhhhhcCCCCCCCCCCCCCCCCcccccccccCCCCCeeEEEecCCCceeEEEeccCchHHH---HHHHcc
Q 003805 590 LLEIQCHSKLAARRALKPKKGSKPDGCDDNGDAVAGLDMRSSMESPLSWIRADPEMEYLAEIHFNQPVQMW---INQLEK 666 (794)
Q Consensus 590 ~~~i~~~~k~~~~r~~k~~~~~~~~~~~~~~d~~~~~d~~~~~~~~~~wIr~D~~~~~~~~v~~~~~~~m~---~~qL~~ 666 (794)
.. + ...++.+||++|+++.|+||| +|++.+| +.||+.
T Consensus 59 -~~------------------------------i-------~l~~~~~wi~~N~~~~GyYRV--nYd~~~w~~L~~~L~~ 98 (419)
T 3rjo_A 59 -DV------------------------------L-------ILPEEVEWIKFNVGMNGYYIV--HYEDDGWDSLTGLLKG 98 (419)
T ss_dssp -EE------------------------------E-------ECSSCCSCEEEEESSSSCCEE--ECHHHHHHHHHHHHHH
T ss_pred -eE------------------------------E-------EcCCCCceEEEeCCccceEEE--EeCHHHHHHHHHHHhh
Confidence 00 0 011234799999999999999 7878887 566765
Q ss_pred cCCh------HHHHHHHHHHHcCCCCchhHHhHHHHhhccCcchhHHHHHHHHHHHhhccccc------ccccHH-H---
Q 003805 667 DGDV------VAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEET------DWAGLL-H--- 730 (794)
Q Consensus 667 d~dv------~aq~~a~~~l~~~~~~~~~~~~~L~~~l~~~~~f~~VR~~Aa~~L~~~~~~~~------~~~g~~-~--- 730 (794)
++.. .+-++++.+|++.+..++.....|++.|.+|+. |-|+.+|...|..+...-. .+..+. +
T Consensus 99 ~~~~i~~~dRa~LidD~~~La~ag~~~~~~~l~l~~yL~~E~~-y~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 177 (419)
T 3rjo_A 99 THTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETE-IMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIR 177 (419)
T ss_dssp HGGGSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGGGCCS-HHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred CCccCCHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcccch-HHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHH
Confidence 4333 345588889999888888877888999999865 8999999999987654211 111111 1
Q ss_pred -HHHHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHH
Q 003805 731 -LVKFYKSRRFDENIGLPRPNDFRDFSEYFVLEVIALRLFHM-PLPWLELLTTKAQEKL 787 (794)
Q Consensus 731 -L~~~f~~~~~~~~~~i~~~n~f~~~~~y~~~kai~~a~~~~-~~~~~~~~~~~~~~~~ 787 (794)
+...|.+.-+. ++ .+...=.++..|...+|.+ ..+|++.+...-++-+
T Consensus 178 l~~~~~~~lgw~-------~~--~~~~~~~lR~~~l~~ac~~g~~~c~~~A~~~f~~~~ 227 (419)
T 3rjo_A 178 LLRDLIDKQTWT-------DE--GSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWK 227 (419)
T ss_dssp HHHHHHHHCCSS-------CC--SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-------CC--chHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 22223332222 11 3566667888888999999 8999999988766543
No 13
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=78.41 E-value=3 Score=36.95 Aligned_cols=67 Identities=21% Similarity=0.147 Sum_probs=50.8
Q ss_pred HHHHHcccCChHHHHHHHHHHHcCCCCchhHHhHHHHhhccCcchhHHHHHHHHHHHhhcccccccccHHHHHHHH
Q 003805 660 WINQLEKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFY 735 (794)
Q Consensus 660 ~~~qL~~d~dv~aq~~a~~~l~~~~~~~~~~~~~L~~~l~~~~~f~~VR~~Aa~~L~~~~~~~~~~~g~~~L~~~f 735 (794)
.+..| .|.|..-|..|+.+|...+. ...+..|.+.|.|+ .+.||.+|+.+|+++..+ ..++.|++..
T Consensus 47 L~~~L-~d~~~~vR~~A~~aL~~~~~--~~a~~~L~~~L~d~--~~~VR~~A~~aL~~~~~~----~a~~~L~~~l 113 (131)
T 1te4_A 47 LLESL-SNEDWRIRGAAAWIIGNFQD--ERAVEPLIKLLEDD--SGFVRSGAARSLEQIGGE----RVRAAMEKLA 113 (131)
T ss_dssp HHHGG-GCSCHHHHHHHHHHHGGGCS--HHHHHHHHHHHHHC--CTHHHHHHHHHHHHHCSH----HHHHHHHHHT
T ss_pred HHHHH-cCCCHHHHHHHHHHHHhcCC--HHHHHHHHHHHcCC--CHHHHHHHHHHHHHhCcH----HHHHHHHHHH
Confidence 34444 68999999999999998753 34677899999876 489999999999988743 2345555544
No 14
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=77.86 E-value=8.6 Score=36.79 Aligned_cols=91 Identities=30% Similarity=0.284 Sum_probs=56.1
Q ss_pred cccCChHHHHHHHHHHHcCCCCchhHHhHHHHhhccCcchhHHHHHHHHHHHhhcccccccccHHHHHHHHHhcCCCCCC
Q 003805 665 EKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFYKSRRFDENI 744 (794)
Q Consensus 665 ~~d~dv~aq~~a~~~l~~~~~~~~~~~~~L~~~l~~~~~f~~VR~~Aa~~L~~~~~~~~~~~g~~~L~~~f~~~~~~~~~ 744 (794)
..|.|..-+..|+.+|.+.+.. .....|.+.|.|+ -..||..|+.+|+++..++ .+..|+++.+ ++
T Consensus 90 l~~~~~~vr~~a~~aL~~~~~~--~~~~~L~~~l~d~--~~~vr~~a~~aL~~~~~~~----~~~~L~~~l~----d~-- 155 (211)
T 3ltm_A 90 LKDEDGWVRQSAAVALGQIGDE--RAVEPLIKALKDE--DWFVRIAAAFALGEIGDER----AVEPLIKALK----DE-- 155 (211)
T ss_dssp TTCSSHHHHHHHHHHHHHHCCG--GGHHHHHHHTTCS--SHHHHHHHHHHHHHHCCGG----GHHHHHHHTT----CS--
T ss_pred HcCCCHHHHHHHHHHHHHhCcH--HHHHHHHHHHhCC--CHHHHHHHHHHHHHcCCHH----HHHHHHHHHc----CC--
Confidence 3667777777777777776432 3456677777664 4678888888888775432 3444444432 21
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHhcC-ChhHHHHHHH
Q 003805 745 GLPRPNDFRDFSEYFVLEVIALRLFHM-PLPWLELLTT 781 (794)
Q Consensus 745 ~i~~~n~f~~~~~y~~~kai~~a~~~~-~~~~~~~~~~ 781 (794)
+..|+.+...+|+.+ ..+.++.+..
T Consensus 156 ------------~~~vr~~a~~aL~~~~~~~~~~~L~~ 181 (211)
T 3ltm_A 156 ------------DGWVRQSAADALGEIGGERVRAAMEK 181 (211)
T ss_dssp ------------SHHHHHHHHHHHHHHCSHHHHHHHHH
T ss_pred ------------CHHHHHHHHHHHHHhCchhHHHHHHH
Confidence 135777888888887 4455555443
No 15
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=75.90 E-value=9.9 Score=36.35 Aligned_cols=49 Identities=29% Similarity=0.173 Sum_probs=24.6
Q ss_pred cCChHHHHHHHHHHHcCCCCchhHHhHHHHhhccCcchhHHHHHHHHHHHhhc
Q 003805 667 DGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTA 719 (794)
Q Consensus 667 d~dv~aq~~a~~~l~~~~~~~~~~~~~L~~~l~~~~~f~~VR~~Aa~~L~~~~ 719 (794)
+.|..-+..|+..|...+. ......|.+.|.|+ ...||..|+.+|+++.
T Consensus 30 ~~~~~vR~~A~~~L~~~~~--~~~~~~L~~~l~~~--~~~vr~~a~~aL~~~~ 78 (211)
T 3ltm_A 30 DDSYYVRRAAAYALGKIGD--ERAVEPLIKALKDE--DAWVRRAAADALGQIG 78 (211)
T ss_dssp CSSHHHHHHHHHHHHHHCC--GGGHHHHHHHTTCS--CHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhCC--ccHHHHHHHHHcCC--CHHHHHHHHHHHHhhC
Confidence 5555555555555555432 12334455555543 2455555555555544
No 16
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=73.96 E-value=10 Score=35.88 Aligned_cols=24 Identities=13% Similarity=-0.112 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHhcC-ChhHHHHHHH
Q 003805 758 YFVLEVIALRLFHM-PLPWLELLTT 781 (794)
Q Consensus 758 y~~~kai~~a~~~~-~~~~~~~~~~ 781 (794)
..|+.+...+|+.+ ..+.++.+..
T Consensus 152 ~~vr~~A~~aL~~~~~~~~~~~L~~ 176 (201)
T 3ltj_A 152 GWVRQSAADALGEIGGERVRAAMEK 176 (201)
T ss_dssp HHHHHHHHHHHHHHCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCchhHHHHHHH
Confidence 35777778888877 3444444443
No 17
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=69.32 E-value=27 Score=35.81 Aligned_cols=98 Identities=7% Similarity=0.092 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCccEE-EECCC--Ccccccccccchhhhcc--ccccCcccchhhhhHHHHHHH
Q 003805 277 KIHNTVEFFHNAFSHYETYLDAKFPFGSYKQV-FLAPE--MAVSSSTFGAAMGIFSS--QILYDEKVIDQAIDTSIKLSF 351 (794)
Q Consensus 277 ~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V-~vp~~--~~~~~~~~gagl~~~~~--~lL~~~~~~~~~~~~~~~iaH 351 (794)
.+..+.-.+.++.+||.++|| .=|+.- .++ .|... ..++ .|-+.-.+|.+ ...++ .....+++|
T Consensus 72 ~~~DAhy~a~~~~d~y~~~~g-r~~id~-~l~~~Vhyg~~y~NA--fWdG~~M~fGDG~~~~~p-------~~~lDVv~H 140 (301)
T 1u4g_A 72 PLNDAHFFGGVVFKLYRDWFG-TSPLTH-KLYMKVHYGRSVENA--YWDGTAMLFGDGATMFYP-------LVSLDVAAH 140 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS-SCSSSS-CEEEEESCTTTCCCE--EECSSCEEECCCCSSBSC-------SCCHHHHHH
T ss_pred hhHHHHHhHHHHHHHHHHHcC-CCCCCC-ceEEEEecCCCccCc--EecCcEEEeeCCCccccc-------ccccceeee
Confidence 455667778899999999998 556653 333 23211 1122 22212222322 11111 112458999
Q ss_pred HHHHHhhccccCCCCCCch-HHHHHHHHHHHHHHH
Q 003805 352 ALARQWFGVYITPELPNDE-WLLDGLAGFLTDSFI 385 (794)
Q Consensus 352 ElAHQWfG~~Vt~~~w~d~-WL~EG~A~y~~~~~~ 385 (794)
|++|--.-....+....+. =|||||+..+...+-
T Consensus 141 E~tHGVt~~~agL~y~~eSGaLnEs~SDifG~~ve 175 (301)
T 1u4g_A 141 EVSHGFTEQNSGLIYRGQSGGMNEAFSDMAGEAAE 175 (301)
T ss_dssp HHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceeccccCccccCCccchhHHHHHHHHHHHH
Confidence 9999987776555444444 389999999987654
No 18
>2y3u_A Collagenase, collagenase G; hydrolase, gluzincin, metalloprotease; HET: P6G FLC; 2.55A {Clostridium histolyticum} PDB: 2y50_A* 2y6i_A*
Probab=66.49 E-value=3.1 Score=48.64 Aligned_cols=36 Identities=17% Similarity=0.256 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhhccccCCCCCC---------chHHHHHHHHHHHH
Q 003805 347 IKLSFALARQWFGVYITPELPN---------DEWLLDGLAGFLTD 382 (794)
Q Consensus 347 ~~iaHElAHQWfG~~Vt~~~w~---------d~WL~EG~A~y~~~ 382 (794)
.++.||++|.-=|-+..+..|. -.|+.||+|.||+.
T Consensus 424 e~f~HEytHyLdgRy~~~G~f~~~~~y~~~~~vW~~EG~AEY~s~ 468 (785)
T 2y3u_A 424 ELFRHEYTHYLQARYLVDGLWGQGPFYEKNRLTWFDEGTAEFFAG 468 (785)
T ss_dssp HHHHHHHHHHHHHHHTSCSSTTSSGGGTTTCSHHHHHHHHHHHTT
T ss_pred ccccchhhhccccccccccccccCcccccCCCceehhhHHHHHhc
Confidence 3568999999977666666665 57999999999954
No 19
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=63.69 E-value=12 Score=35.38 Aligned_cols=50 Identities=28% Similarity=0.187 Sum_probs=22.3
Q ss_pred ccCChHHHHHHHHHHHcCCCCchhHHhHHHHhhccCcchhHHHHHHHHHHHhhc
Q 003805 666 KDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTA 719 (794)
Q Consensus 666 ~d~dv~aq~~a~~~l~~~~~~~~~~~~~L~~~l~~~~~f~~VR~~Aa~~L~~~~ 719 (794)
.+.|..-|..|+.+|...+.. .....|.+.|.|+ ...||..|+.+|+++.
T Consensus 24 ~~~~~~vr~~A~~~L~~~~~~--~~~~~L~~~l~~~--~~~vr~~a~~~L~~~~ 73 (201)
T 3ltj_A 24 QDDSYYVRRAAAYALGKIGDE--RAVEPLIKALKDE--DAWVRRAAADALGQIG 73 (201)
T ss_dssp TCSCHHHHHHHHHHHHHHCCG--GGHHHHHHHTTCS--SHHHHHHHHHHHHHHC
T ss_pred cCCCHHHHHHHHHHHHhcCCh--hHHHHHHHHHcCC--CHHHHHHHHHHHHhhC
Confidence 444444555555555543321 2334444444443 2345555555555443
No 20
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=60.88 E-value=40 Score=34.57 Aligned_cols=99 Identities=5% Similarity=0.032 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCC--ccEE-EEC-C------CCcccccccccchhhhcc--ccccCcccchhhhh
Q 003805 277 KIHNTVEFFHNAFSHYETYLDAKFPFGS--YKQV-FLA-P------EMAVSSSTFGAAMGIFSS--QILYDEKVIDQAID 344 (794)
Q Consensus 277 ~~~~~~~~~~~~l~~~e~~~g~~YP~~k--~~~V-~vp-~------~~~~~~~~~gagl~~~~~--~lL~~~~~~~~~~~ 344 (794)
.+..+...+.++.+||.+.|| .=++.- ..++ .|. + ...++ .|-....+|.+ ...+.+ .-.
T Consensus 66 ~avdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~Vhyg~~~~~~~y~NA--fWdg~~m~fGdGdg~~f~~-----~~~ 137 (301)
T 1bqb_A 66 AGVDANYYAKQTYDYYKNTFG-RESYDNHGSPIVSLTHVNHYGGQDNRNNA--AWIGDKMIYGDGDGRTFTN-----LSG 137 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEECCCEETTEECTTCE--EECSSSEEECCCCSSSBSC-----GGG
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEEeCCCCCCCCccCc--EEcCCEEEEEcCCCcccCC-----ccc
Confidence 344677778899999999999 446642 3333 232 1 11122 12212222322 111111 111
Q ss_pred HHHHHHHHHHHHhhccccCCCCCCch-HHHHHHHHHHHHH
Q 003805 345 TSIKLSFALARQWFGVYITPELPNDE-WLLDGLAGFLTDS 383 (794)
Q Consensus 345 ~~~~iaHElAHQWfG~~Vt~~~w~d~-WL~EG~A~y~~~~ 383 (794)
...+++||+.|--.-....+..-.+. =|||||+..+...
T Consensus 138 ~lDVv~HE~tHGVt~~~agl~y~~eSGaLnEs~SDifg~~ 177 (301)
T 1bqb_A 138 ANDVVAHEITHGVTQQTANLEYKDQSGALNESFSDVFGYF 177 (301)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHH
T ss_pred ccceeeeecccceecccCCCcccCCcCchhHHHHHHHhHh
Confidence 34589999999876665444433333 3899999999854
No 21
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=58.46 E-value=20 Score=35.83 Aligned_cols=70 Identities=26% Similarity=0.165 Sum_probs=50.1
Q ss_pred HHHHHcccCChHHHHHHHHHHHcCCCCchhHHhHHHHhhccCcchhHHHHHHHHHHHhhcccccccccHHHHHHHHH
Q 003805 660 WINQLEKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFYK 736 (794)
Q Consensus 660 ~~~qL~~d~dv~aq~~a~~~l~~~~~~~~~~~~~L~~~l~~~~~f~~VR~~Aa~~L~~~~~~~~~~~g~~~L~~~f~ 736 (794)
.+..| .|.|..-+..|+.+|...+.....+...|...|.|+ ...||.+|+.+|+++..+ ..++.|++..+
T Consensus 164 L~~~l-~d~~~~vr~~a~~aL~~~~~~~~~~~~~L~~~l~d~--~~~vR~~A~~aL~~~~~~----~~~~~L~~~l~ 233 (280)
T 1oyz_A 164 LINLL-KDPNGDVRNWAAFAININKYDNSDIRDCFVEMLQDK--NEEVRIEAIIGLSYRKDK----RVLSVLCDELK 233 (280)
T ss_dssp HHHHH-TCSSHHHHHHHHHHHHHHTCCCHHHHHHHHHHTTCS--CHHHHHHHHHHHHHTTCG----GGHHHHHHHHT
T ss_pred HHHHH-cCCCHHHHHHHHHHHHhhccCcHHHHHHHHHHhcCC--CHHHHHHHHHHHHHhCCH----hhHHHHHHHhc
Confidence 34444 677877888888888876544555677788888776 378999999999988743 34566666654
No 22
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=58.20 E-value=10 Score=33.32 Aligned_cols=54 Identities=19% Similarity=0.121 Sum_probs=42.8
Q ss_pred HHHHHcccCChHHHHHHHHHHHcCCCCchhHHhHHHHhhccCcchhHHHHHHHHHHHhh
Q 003805 660 WINQLEKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANT 718 (794)
Q Consensus 660 ~~~qL~~d~dv~aq~~a~~~l~~~~~~~~~~~~~L~~~l~~~~~f~~VR~~Aa~~L~~~ 718 (794)
.+..| .|.|..-+..|+.+|.+.+. ..+...|...|.|+ -..||..|+.+|+++
T Consensus 78 L~~~L-~d~~~~VR~~A~~aL~~~~~--~~a~~~L~~~l~d~--~~~vr~~A~~aL~~i 131 (131)
T 1te4_A 78 LIKLL-EDDSGFVRSGAARSLEQIGG--ERVRAAMEKLAETG--TGFARKVAVNYLETH 131 (131)
T ss_dssp HHHHH-HHCCTHHHHHHHHHHHHHCS--HHHHHHHHHHTTSC--CTHHHHHHHHHGGGC
T ss_pred HHHHH-cCCCHHHHHHHHHHHHHhCc--HHHHHHHHHHHhCC--CHHHHHHHHHHHHhC
Confidence 34455 78999999999999998753 34667888888775 368999999999864
No 23
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=57.10 E-value=12 Score=32.00 Aligned_cols=16 Identities=13% Similarity=0.042 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHhhcc
Q 003805 345 TSIKLSFALARQWFGV 360 (794)
Q Consensus 345 ~~~~iaHElAHQWfG~ 360 (794)
..-+||||++|-=-++
T Consensus 83 l~aVlaHElgH~~~~h 98 (107)
T 3cqb_A 83 AEAVLAHEVSHIANGD 98 (107)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCCC
Confidence 3458999999975444
No 24
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=54.71 E-value=21 Score=35.70 Aligned_cols=66 Identities=17% Similarity=0.087 Sum_probs=51.5
Q ss_pred HHHcccCChHHHHHHHHHHHcCCCCchhHHhHHHHhhccCcchhHHHHHHHHHHHhhcccccccccHHHHHHHHHh
Q 003805 662 NQLEKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFYKS 737 (794)
Q Consensus 662 ~qL~~d~dv~aq~~a~~~l~~~~~~~~~~~~~L~~~l~~~~~f~~VR~~Aa~~L~~~~~~~~~~~g~~~L~~~f~~ 737 (794)
.++..|.|..-+..|+.+|...+. ..++..|...|.|+. ||..|+.+|+++..+ ..++.|.++.+.
T Consensus 198 ~~~l~d~~~~vR~~A~~aL~~~~~--~~~~~~L~~~l~d~~----vr~~a~~aL~~i~~~----~~~~~L~~~l~~ 263 (280)
T 1oyz_A 198 VEMLQDKNEEVRIEAIIGLSYRKD--KRVLSVLCDELKKNT----VYDDIIEAAGELGDK----TLLPVLDTMLYK 263 (280)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHTTC--GGGHHHHHHHHTSSS----CCHHHHHHHHHHCCG----GGHHHHHHHHTT
T ss_pred HHHhcCCCHHHHHHHHHHHHHhCC--HhhHHHHHHHhcCcc----HHHHHHHHHHhcCch----hhhHHHHHHHhc
Confidence 334478888899999999999763 456788999998863 999999999998764 356777777654
No 25
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=53.91 E-value=88 Score=32.60 Aligned_cols=105 Identities=7% Similarity=0.016 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCCCC--ccEE-EECC--CCcccccccccchhhhccc--cccCcccchhhhhHHHH
Q 003805 276 SKIHNTVEFFHNAFSHYETYLDAKFPFGS--YKQV-FLAP--EMAVSSSTFGAAMGIFSSQ--ILYDEKVIDQAIDTSIK 348 (794)
Q Consensus 276 ~~~~~~~~~~~~~l~~~e~~~g~~YP~~k--~~~V-~vp~--~~~~~~~~~gagl~~~~~~--lL~~~~~~~~~~~~~~~ 348 (794)
..+..+...+..+.+||.+.||. =++.- ..++ .|-. ...++. |-+.-.+|.+. ..+.+- .....+
T Consensus 88 ~av~~ay~~~~~t~d~y~~~~gr-nsid~~G~~l~~~VHyg~~y~NAf--WdG~~M~fGDG~g~~f~~~-----~~~lDV 159 (341)
T 2vqx_A 88 VAVDEAYDYLGVTYDFFWQAFKR-NSLDNQGLPLTGSVHYGKEYQNAF--WNGQQMVFGDGDGEIFNRF-----TIAIDV 159 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC-CSTTSSCCCEEEEESCSSSCCCEE--ECSSCEEECCCCSSSBCCT-----TSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CCCCCCCCeeEEEEecCCCccCce--ecCcEeEeeCCCCcccCCc-----ccchhh
Confidence 34555666778899999999994 35531 3333 3321 111221 22122233221 111111 112358
Q ss_pred HHHHHHHHhhccccCCCCCCch-HHHHHHHHHHHHHHHHHH
Q 003805 349 LSFALARQWFGVYITPELPNDE-WLLDGLAGFLTDSFIKKF 388 (794)
Q Consensus 349 iaHElAHQWfG~~Vt~~~w~d~-WL~EG~A~y~~~~~~~~~ 388 (794)
++||++|.-.-....+..-.+. =|||||+.++...+-...
T Consensus 160 v~HEltHGVt~~~agL~Y~~eSGaLNEs~SDifG~~ve~~~ 200 (341)
T 2vqx_A 160 VGHALAHGVTESEAGLIYFQQAGALNESLSDVFGSLVKQFH 200 (341)
T ss_dssp HHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccceecccCCccccCCCcchhhHHHHHHHHHHHHHh
Confidence 9999999877655444433333 399999999987664333
No 26
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=52.46 E-value=75 Score=32.76 Aligned_cols=102 Identities=3% Similarity=0.005 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCCCC--CccEE-EEC--CCCcccccccccchhhhcc--ccccCcccchhhhhHHHH
Q 003805 276 SKIHNTVEFFHNAFSHYETYLDAKFPFG--SYKQV-FLA--PEMAVSSSTFGAAMGIFSS--QILYDEKVIDQAIDTSIK 348 (794)
Q Consensus 276 ~~~~~~~~~~~~~l~~~e~~~g~~YP~~--k~~~V-~vp--~~~~~~~~~~gagl~~~~~--~lL~~~~~~~~~~~~~~~ 348 (794)
..+..+...+....+||.+.|| .=++. -..++ .|. ....++ -|-....+|.+ ...+.+- .....+
T Consensus 68 ~aavdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~VHyg~~y~NA--fW~g~~m~fGDGdg~~f~~~-----~~slDV 139 (316)
T 3dnz_A 68 APAVDAHYYAGVTYDYYKNVHN-RLSYDGNNAAIRSSVHYSQGYNNA--FWNGSQMVYGDGDGQTFIPL-----SGGIDV 139 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEESCTTTCCCE--EECSSCEEECCCCSSSBSCG-----GGCHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCceEEEEEecCCCccCc--eEcCCEEEEeCCCCcccccc-----cccccc
Confidence 3456777888999999999999 44664 23333 232 111222 22222333422 1122221 112458
Q ss_pred HHHHHHHHhhccccCCCCCCch-HHHHHHHHHHHHHHH
Q 003805 349 LSFALARQWFGVYITPELPNDE-WLLDGLAGFLTDSFI 385 (794)
Q Consensus 349 iaHElAHQWfG~~Vt~~~w~d~-WL~EG~A~y~~~~~~ 385 (794)
++||+.|--.-..-....-.+. =|||+|+..+...+-
T Consensus 140 v~HE~tHgvt~~~agL~y~~esGaLNEs~SDifG~~ve 177 (316)
T 3dnz_A 140 VAHELTHAVTDYTAGLIYQNESGAINEAISDIFGTLVE 177 (316)
T ss_dssp HHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeeccccccccCCCcccCCccchhHHHHHHHHHHHH
Confidence 9999999876554333322222 389999999976553
No 27
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=49.18 E-value=76 Score=32.49 Aligned_cols=101 Identities=4% Similarity=0.017 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCC--ccEEE-E--CCCCcccccccccchhhhcc--ccccCcccchhhhhHHHHH
Q 003805 277 KIHNTVEFFHNAFSHYETYLDAKFPFGS--YKQVF-L--APEMAVSSSTFGAAMGIFSS--QILYDEKVIDQAIDTSIKL 349 (794)
Q Consensus 277 ~~~~~~~~~~~~l~~~e~~~g~~YP~~k--~~~V~-v--p~~~~~~~~~~gagl~~~~~--~lL~~~~~~~~~~~~~~~i 349 (794)
.+..+...+.+..+||.+.|| .=++.- +.++. | .....++. |-....+|.+ ...+.+- .....++
T Consensus 62 aavdA~~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg~~y~NAf--W~g~~m~fGDGdg~~f~~~-----~~slDVv 133 (304)
T 4ger_A 62 AGVDAHTYAAKTYDYYKAKFG-RNSIDGRGLQLRSTVHYGSRYNNAF--WNGSQMTYGDGDGSTFIAF-----SGDPDVV 133 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEEEESSSCCCEE--ECSSCEEEECCCSSSBCCG-----GGSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeEEEEEeCCCCccCce--ecCCEEEEeCCCCcccccc-----ccccchh
Confidence 455677788899999999999 446642 33332 2 22222332 2222333432 1222211 1124589
Q ss_pred HHHHHHHhhccccCCCCCCch-HHHHHHHHHHHHHHH
Q 003805 350 SFALARQWFGVYITPELPNDE-WLLDGLAGFLTDSFI 385 (794)
Q Consensus 350 aHElAHQWfG~~Vt~~~w~d~-WL~EG~A~y~~~~~~ 385 (794)
+|||.|--.-..-....-.+. =|||+|+..+...+-
T Consensus 134 aHEltHGVt~~ta~L~Y~~qsGaLNEs~SDifG~~ve 170 (304)
T 4ger_A 134 GHELTHGVTEYTSNLEYYGESGALNEAFSDVIGNDIQ 170 (304)
T ss_dssp HHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccccccccCCccccCCccchhHHHHHHHHHHhc
Confidence 999999765543222221222 389999999976654
No 28
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=37.42 E-value=1.6e+02 Score=30.01 Aligned_cols=98 Identities=8% Similarity=0.118 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCccEE-EEC--CCCcccccccccchhhhcc--ccccCcccchhhhhHHHHHHH
Q 003805 277 KIHNTVEFFHNAFSHYETYLDAKFPFGSYKQV-FLA--PEMAVSSSTFGAAMGIFSS--QILYDEKVIDQAIDTSIKLSF 351 (794)
Q Consensus 277 ~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V-~vp--~~~~~~~~~~gagl~~~~~--~lL~~~~~~~~~~~~~~~iaH 351 (794)
.+..+.-.+..+.+||.++|| .=|+. ..++ .|. ....++ .|-+.-.+|.+ ..+++ .....+++|
T Consensus 73 ~~~DAhy~a~~t~d~y~~~~g-r~~id-~~l~~~VHyg~~y~NA--fWdg~~m~fGDG~~~~~~-------~~slDVv~H 141 (306)
T 3nqx_A 73 PLNDAHFFGNVIFNMYNDWLG-TAPLS-FQLQMRVHYSSNYENA--FWDGSAMTFGDGQNTFYP-------LVSLDVSAH 141 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS-SCSSS-SCEEEEEEESSSCCCE--EECSSCEEEECCCSSBSC-------SCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcC-CCCCC-CceEEEEecCCCccCc--cccCCEEEEeCCCccccc-------ccccchhhh
Confidence 356666778899999999999 44665 2333 231 111222 22222233422 11111 112458999
Q ss_pred HHHHHhhccccCCCCCCc-hHHHHHHHHHHHHHHH
Q 003805 352 ALARQWFGVYITPELPND-EWLLDGLAGFLTDSFI 385 (794)
Q Consensus 352 ElAHQWfG~~Vt~~~w~d-~WL~EG~A~y~~~~~~ 385 (794)
|+.|--.-..-.+..-.+ ==|||||+..+...+-
T Consensus 142 E~tHGvt~~~a~l~y~~esGaLnEs~SDifg~~ve 176 (306)
T 3nqx_A 142 EVSHGFTEQNSGLIYNGKPGGLNEAFSDMAGEAAE 176 (306)
T ss_dssp HHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccccCCCCCccCCCCCcccchHHHHHHHHHH
Confidence 999987654322222111 2489999999977654
No 29
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=32.94 E-value=72 Score=29.83 Aligned_cols=80 Identities=24% Similarity=0.172 Sum_probs=54.7
Q ss_pred chHHHHHHHcccCChHHHHHHHHHHHcCCCCchh---------HHhHHHHhhccCcchhHHHHHHHHHHHhhccccc---
Q 003805 656 PVQMWINQLEKDGDVVAQAQAIAALEALPHLSFN---------VVNTLNNFLSDSKAFWRVRIEAAYALANTASEET--- 723 (794)
Q Consensus 656 ~~~m~~~qL~~d~dv~aq~~a~~~l~~~~~~~~~---------~~~~L~~~l~~~~~f~~VR~~Aa~~L~~~~~~~~--- 723 (794)
+.+.....|.++.|..-|..|+.+|......+.. .+..|.+.|.++ .-.||..|+.+|+.++....
T Consensus 12 ~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~~~~~~ 89 (210)
T 4db6_A 12 SELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASGGNEQI 89 (210)
T ss_dssp -CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHTTSCHHHH
T ss_pred chhHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhcCCcHHH
Confidence 4455666777888999999998888765322211 345677888775 46999999999999874321
Q ss_pred ----ccccHHHHHHHHHh
Q 003805 724 ----DWAGLLHLVKFYKS 737 (794)
Q Consensus 724 ----~~~g~~~L~~~f~~ 737 (794)
...+++.|+++.+.
T Consensus 90 ~~i~~~g~i~~L~~lL~~ 107 (210)
T 4db6_A 90 QAVIDAGALPALVQLLSS 107 (210)
T ss_dssp HHHHHTTCHHHHHHHTTC
T ss_pred HHHHHCCCHHHHHHHHcC
Confidence 22467777777653
No 30
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=30.69 E-value=25 Score=35.21 Aligned_cols=54 Identities=6% Similarity=-0.034 Sum_probs=27.7
Q ss_pred CccEEEECCCCcccccccccchhhhccccccCcccchhhhhHHHHHHHHHHHHhhccc
Q 003805 304 SYKQVFLAPEMAVSSSTFGAAMGIFSSQILYDEKVIDQAIDTSIKLSFALARQWFGVY 361 (794)
Q Consensus 304 k~~~V~vp~~~~~~~~~~gagl~~~~~~lL~~~~~~~~~~~~~~~iaHElAHQWfG~~ 361 (794)
.+++.++++...++.. .++|.+.+.+.||-.-+ ...+..-+|+|||+|-=-++.
T Consensus 63 ~~~v~v~~~~~~NAfa-~~gg~I~v~~gLl~~l~---~~~ELaaVLaHElgH~~~~H~ 116 (253)
T 3c37_A 63 DYVFKVVKDDSVNAFA-IPGGRVYVHTGLLKAAD---NETELAGVLAHEINHAVARHG 116 (253)
T ss_dssp CCEEEEECCCSCCEEE-ETTTEEEEEHHHHHHCS---SHHHHHHHHHHHHHHHHTTHH
T ss_pred CeEEEEEeCCCCCeeE-cCCCeEEeeHHHHhhCC---CHHHHHHHHHHHHHHHHCcCH
Confidence 4566677654444432 23344444554442110 112334589999999755443
No 31
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=25.97 E-value=29 Score=30.85 Aligned_cols=25 Identities=4% Similarity=-0.098 Sum_probs=15.1
Q ss_pred hHHHHHHHHHHHHhhccccCCCCCCc
Q 003805 344 DTSIKLSFALARQWFGVYITPELPND 369 (794)
Q Consensus 344 ~~~~~iaHElAHQWfG~~Vt~~~w~d 369 (794)
..+.++.||+||.+ |.+-....|+|
T Consensus 88 ~V~~tvvHEiaHhf-e~lag~~glsd 112 (130)
T 2ejq_A 88 EVWETMLHELRHHL-ESLAGRDDLVQ 112 (130)
T ss_dssp HHHHHHHHHHHHHH-HHHHTTC----
T ss_pred HHHHHHHHHhHHHH-HhhcccCCCCH
Confidence 45668999999984 55555555443
No 32
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=22.48 E-value=1.1e+02 Score=28.43 Aligned_cols=72 Identities=26% Similarity=0.246 Sum_probs=48.3
Q ss_pred HHcccCChHHHHHHHHHHHcCCCCchh---------HHhHHHHhhccCcchhHHHHHHHHHHHhhccccc-------ccc
Q 003805 663 QLEKDGDVVAQAQAIAALEALPHLSFN---------VVNTLNNFLSDSKAFWRVRIEAAYALANTASEET-------DWA 726 (794)
Q Consensus 663 qL~~d~dv~aq~~a~~~l~~~~~~~~~---------~~~~L~~~l~~~~~f~~VR~~Aa~~L~~~~~~~~-------~~~ 726 (794)
+|..+.|...|..|+.+|......+.. .+..|.+.|.+.. ..||..|+.+|+.++.... +..
T Consensus 61 ~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~--~~v~~~a~~~L~~l~~~~~~~~~~~~~~~ 138 (210)
T 4db6_A 61 QLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPN--EQILQEALWALSNIASGGNEQIQAVIDAG 138 (210)
T ss_dssp HHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCSC--HHHHHHHHHHHHHHTTSCHHHHHHHHHTT
T ss_pred HHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHcCCc--HHHHHHHHHHHHHHHcCCHHHHHHHHHcC
Confidence 444666878888888888865432211 3456778887763 7999999999999874321 223
Q ss_pred cHHHHHHHHH
Q 003805 727 GLLHLVKFYK 736 (794)
Q Consensus 727 g~~~L~~~f~ 736 (794)
+++.|+++.+
T Consensus 139 ~i~~L~~ll~ 148 (210)
T 4db6_A 139 ALPALVQLLS 148 (210)
T ss_dssp HHHHHHHHTT
T ss_pred cHHHHHHHHc
Confidence 5666766664
No 33
>2kd2_A FAS apoptotic inhibitory molecule 1; protein, beta sandwich, apoptosis; NMR {Mus musculus} PDB: 2kw1_A
Probab=22.14 E-value=3.3e+02 Score=22.47 Aligned_cols=65 Identities=9% Similarity=0.117 Sum_probs=42.2
Q ss_pred ccCCcceEEeecCCCCCeeEEEEEEEEeCC-eEEEEcCceeeeeeccCCCCceEEEEecCCCCcceeEEEEEee
Q 003805 182 QIRRARCWFPCIDDTTQRCCYDLEFTVSQN-LIAVSAGSLLYQVLSKDDPPRKTYVYRLDVPVSAKWITLAVAP 254 (794)
Q Consensus 182 ep~~Ar~wFPC~D~p~~katf~l~i~~p~~-~~avsng~l~~~~~~~~~~~~~~~~f~~t~p~s~yliafavG~ 254 (794)
+.-..+.|.|-+|. .+..|...++ +-+.+||..+++.-.=.++| ...+|... ..+.|+.|...|.
T Consensus 8 ~~k~~~tW~~~~~G------~~~RIvLeK~tmdVwvNG~~iet~geFvd~G-Tet~F~lg-~~~c~I~a~sSG~ 73 (94)
T 2kd2_A 8 RSKTTSTWVLRLDG------EDLRVVLEKDTMDVWCNGQKMETAGEFVDDG-TETHFSVG-NHDCYIKAVSSGK 73 (94)
T ss_dssp CCTTEEEEEEEETT------EEEEEEEETTTTEEEESSSBCCCCCEECSSS-EEEEEEET-TEEEEEEEEEESS
T ss_pred hhhheeEEEEEeCC------CEEEEEEecCcEEEEECCEEeEEeeEEecCC-cEEEEEeC-CceEEEEEEecCC
Confidence 33456789998875 2556666776 89999999887532112334 44477765 4566777776664
No 34
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=21.27 E-value=1.4e+02 Score=28.68 Aligned_cols=72 Identities=25% Similarity=0.220 Sum_probs=48.6
Q ss_pred HHcccCChHHHHHHHHHHHcCCCCch---------hHHhHHHHhhccCcchhHHHHHHHHHHHhhccccccc-------c
Q 003805 663 QLEKDGDVVAQAQAIAALEALPHLSF---------NVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDW-------A 726 (794)
Q Consensus 663 qL~~d~dv~aq~~a~~~l~~~~~~~~---------~~~~~L~~~l~~~~~f~~VR~~Aa~~L~~~~~~~~~~-------~ 726 (794)
+|.++.+..-|..|+.+|......+. ..+..|.+.|.++ -..||..|+.+|+.++...... .
T Consensus 61 ~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~ 138 (252)
T 4db8_A 61 QLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASGGNEQIQAVIDAG 138 (252)
T ss_dssp HGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCS--CHHHHHHHHHHHHHHTTSCHHHHHHHHHTT
T ss_pred HHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHhhcCCchHHHHHHHCC
Confidence 34456677778888888886543221 1456678888775 4799999999999987543221 3
Q ss_pred cHHHHHHHHH
Q 003805 727 GLLHLVKFYK 736 (794)
Q Consensus 727 g~~~L~~~f~ 736 (794)
+++.|+++.+
T Consensus 139 ~i~~L~~lL~ 148 (252)
T 4db8_A 139 ALPALVQLLS 148 (252)
T ss_dssp HHHHHHHGGG
T ss_pred CHHHHHHHHh
Confidence 5677776664
No 35
>2ys9_A Homeobox and leucine zipper protein homez; homeodomain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.10 E-value=1e+02 Score=23.98 Aligned_cols=42 Identities=12% Similarity=0.200 Sum_probs=31.4
Q ss_pred HHHHHHHHhhhcCCCCCCCCHHHHHHHHHHhcCCCcccHHhHHhhhccC
Q 003805 460 KILQNIISRAQGASPVRTLSTKEFRHFANKVGNLERPFLKEFFPRWVGT 508 (794)
Q Consensus 460 ~~L~~yl~~~~~~~~~~~~st~~f~~~~e~~~~~~~~dl~~f~~~Wv~~ 508 (794)
+.|+.|+.+|+. +..+|+..+|++.. .+...+++.|..|...
T Consensus 19 e~L~~Yy~~hk~------L~EeDl~~L~~ksk-ms~qqvkdwFa~k~~E 60 (70)
T 2ys9_A 19 QPLERYWAAHQQ------LRETDIPQLSQASR-LSTQQVLDWFDSRLPQ 60 (70)
T ss_dssp HHHHHHHHHTCC------CCTTHHHHHHHHTT-CCHHHHHHHHHHHSCC
T ss_pred hHHHHHHHHhcc------cchhhHHHHHHHhC-CCHHHHHHHHHhcccc
Confidence 678899999875 57899999999853 3445677777766543
No 36
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=20.84 E-value=1.2e+02 Score=29.01 Aligned_cols=73 Identities=32% Similarity=0.308 Sum_probs=48.6
Q ss_pred HHHHcccCChHHHHHHHHHHHcCCCCch---------hHHhHHHHhhccCcchhHHHHHHHHHHHhhccccc-------c
Q 003805 661 INQLEKDGDVVAQAQAIAALEALPHLSF---------NVVNTLNNFLSDSKAFWRVRIEAAYALANTASEET-------D 724 (794)
Q Consensus 661 ~~qL~~d~dv~aq~~a~~~l~~~~~~~~---------~~~~~L~~~l~~~~~f~~VR~~Aa~~L~~~~~~~~-------~ 724 (794)
+..| ++.|..-|..|+.+|......+. ..+..|.+.|.++. -.||..|+.+|+.++.... .
T Consensus 8 ~~~L-~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~--~~v~~~a~~~L~~l~~~~~~~~~~~~~ 84 (252)
T 4hxt_A 8 VKLL-TSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTD--SEVQKEAARALANIASGPDEAIKAIVD 84 (252)
T ss_dssp HHHT-TCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSC--HHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHH-cCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCC--HHHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 4445 45667778888888875532222 24566888888764 7999999999999886421 1
Q ss_pred cccHHHHHHHHH
Q 003805 725 WAGLLHLVKFYK 736 (794)
Q Consensus 725 ~~g~~~L~~~f~ 736 (794)
..+++.|+++.+
T Consensus 85 ~~~i~~l~~ll~ 96 (252)
T 4hxt_A 85 AGGVEVLVKLLT 96 (252)
T ss_dssp TTHHHHHHHHTT
T ss_pred CCCHHHHHHHHc
Confidence 235667766665
Done!