Query 003808
Match_columns 794
No_of_seqs 380 out of 2140
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 04:45:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003808.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003808hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3se6_A Endoplasmic reticulum a 100.0 1.2E-82 3.9E-87 769.8 51.3 657 9-791 63-779 (967)
2 2xdt_A Endoplasmic reticulum a 100.0 1.2E-80 4E-85 753.3 45.0 652 10-791 4-711 (897)
3 4fke_A Aminopeptidase N; zinc 100.0 9.1E-81 3.1E-85 756.1 44.0 663 8-791 4-717 (909)
4 3ebh_A PFA-M1, M1 family amino 100.0 9E-79 3.1E-83 721.8 55.1 543 13-682 8-578 (889)
5 3b34_A Aminopeptidase N; prote 100.0 2.7E-78 9.2E-83 722.8 52.1 565 12-701 32-627 (891)
6 1z5h_A Tricorn protease intera 100.0 4.1E-78 1.4E-82 721.0 38.5 545 19-721 1-558 (780)
7 2gtq_A Aminopeptidase N; alani 100.0 9.8E-75 3.3E-79 694.6 51.3 578 15-719 12-621 (867)
8 3u9w_A Leukotriene A-4 hydrola 100.0 8.6E-73 3E-77 658.8 25.0 452 17-533 12-473 (608)
9 3cia_A Cold-active aminopeptid 100.0 1.3E-66 4.4E-71 606.5 34.7 426 16-518 23-463 (605)
10 2xq0_A LTA-4 hydrolase, leukot 100.0 6.9E-67 2.4E-71 610.4 30.3 435 10-518 17-466 (632)
11 4fgm_A Aminopeptidase N family 99.9 1E-23 3.4E-28 242.7 17.4 312 187-514 109-452 (597)
12 3rjo_A Endoplasmic reticulum a 98.7 2.1E-07 7.2E-12 103.3 17.1 208 510-791 1-228 (419)
13 1te4_A Conserved protein MTH18 91.4 0.13 4.5E-06 46.1 3.8 56 661-720 47-102 (131)
14 3ltm_A Alpha-REP4; protein eng 90.5 1.6 5.3E-05 42.2 11.0 97 664-792 89-185 (211)
15 3ltm_A Alpha-REP4; protein eng 88.8 1.5 5.2E-05 42.3 9.4 49 667-719 30-78 (211)
16 3ltj_A Alpharep-4; protein eng 88.2 2.4 8.2E-05 40.4 10.3 96 665-792 85-180 (201)
17 3ltj_A Alpharep-4; protein eng 88.1 1.6 5.5E-05 41.7 8.9 100 659-791 49-148 (201)
18 1oyz_A Hypothetical protein YI 86.5 2.2 7.6E-05 43.2 9.4 98 663-792 166-263 (280)
19 1te4_A Conserved protein MTH18 85.4 1.3 4.5E-05 39.3 6.2 48 666-717 83-130 (131)
20 1oyz_A Hypothetical protein YI 84.6 2.7 9.2E-05 42.5 8.9 58 658-720 26-83 (280)
21 2y3u_A Collagenase, collagenas 69.5 2.5 8.4E-05 49.3 3.4 36 347-382 424-468 (785)
22 1u4g_A Elastase, pseudolysin; 66.4 32 0.0011 35.1 10.6 100 277-387 72-177 (301)
23 1bqb_A Protein (aureolysin); h 59.5 43 0.0015 34.2 10.1 98 278-383 67-177 (301)
24 4db6_A Armadillo repeat protei 55.1 82 0.0028 29.3 11.1 79 656-736 12-106 (210)
25 4db8_A Armadillo-repeat protei 54.1 19 0.00066 35.1 6.5 79 656-736 12-106 (252)
26 2vqx_A Metalloproteinase; ther 53.8 87 0.003 32.6 11.3 104 277-388 89-200 (341)
27 3cqb_A Probable protease HTPX 52.6 15 0.0005 31.4 4.5 16 345-360 83-98 (107)
28 4ger_A Gentlyase metalloprotea 52.5 64 0.0022 32.9 9.9 101 277-385 62-170 (304)
29 3ul1_B Importin subunit alpha- 51.8 47 0.0016 36.7 9.9 75 660-736 105-195 (510)
30 3dnz_A Thermolysin; hydrolase, 50.6 81 0.0028 32.4 10.4 101 277-385 69-177 (316)
31 3l9t_A Putative uncharacterize 48.1 34 0.0012 33.6 6.8 121 661-788 76-219 (240)
32 4hxt_A De novo protein OR329; 46.2 44 0.0015 32.2 7.7 73 661-736 8-96 (252)
33 4hxt_A De novo protein OR329; 44.1 99 0.0034 29.5 10.0 72 663-736 51-138 (252)
34 2vgl_B AP-2 complex subunit be 43.4 40 0.0014 38.1 7.7 61 661-723 126-192 (591)
35 2vgl_B AP-2 complex subunit be 42.3 1.4E+02 0.0049 33.4 12.1 54 666-721 96-151 (591)
36 4ady_A RPN2, 26S proteasome re 41.5 1.1E+02 0.0037 36.6 10.9 63 658-722 544-609 (963)
37 3tpo_A Importin subunit alpha- 36.9 1E+02 0.0036 33.9 9.7 76 659-736 123-214 (529)
38 3nqx_A MCP-02, secreted metall 33.8 1.9E+02 0.0066 29.4 10.0 98 277-385 73-176 (306)
39 2jdq_A Importin alpha-1 subuni 32.9 1.1E+02 0.0038 32.4 8.9 76 659-736 68-159 (450)
40 3c37_A Peptidase, M48 family; 30.1 34 0.0012 34.0 3.7 54 304-361 63-116 (253)
41 2ejq_A Hypothetical protein TT 27.7 26 0.0009 31.0 2.0 25 344-369 88-112 (130)
42 4b8j_A Importin subunit alpha- 27.5 1.4E+02 0.0049 32.5 8.8 75 659-735 121-211 (528)
43 4db6_A Armadillo repeat protei 26.5 84 0.0029 29.3 5.8 74 661-736 59-148 (210)
44 4db8_A Armadillo-repeat protei 25.9 1E+02 0.0035 29.6 6.4 73 662-736 60-148 (252)
45 1wa5_B Importin alpha subunit; 23.7 2.5E+02 0.0087 30.5 9.9 72 664-737 307-394 (530)
46 1w63_A Adapter-related protein 23.5 1.5E+02 0.0052 33.5 8.1 69 666-736 323-395 (618)
47 1wa5_B Importin alpha subunit; 22.3 1.3E+02 0.0044 33.1 7.0 74 661-736 136-225 (530)
48 2ys9_A Homeobox and leucine zi 21.7 1.1E+02 0.0038 23.7 4.2 42 460-508 19-60 (70)
49 1xqr_A HSPBP1 protein; armadil 20.8 1.7E+02 0.0057 29.7 6.9 107 669-794 53-180 (296)
50 1b3u_A Protein (protein phosph 20.4 85 0.0029 34.7 5.1 57 662-720 209-271 (588)
51 3tjz_B Coatomer subunit gamma; 20.0 2.6E+02 0.0089 29.1 8.3 45 675-721 90-134 (355)
No 1
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=100.00 E-value=1.2e-82 Score=769.83 Aligned_cols=657 Identities=15% Similarity=0.185 Sum_probs=473.7
Q ss_pred CcCCCCCCCCeEEEEEEEEEEEeccCcEEEEEEEEEEEc-CCcceEEEeccCceeeEEEEcCee----------eee-ee
Q 003808 9 NEETKVENSGAVVRHQKLCLSIDMEKHQIYGYTELEIAV-PDIGIVGLHAENLGIESVLVDGEP----------TEF-EY 76 (794)
Q Consensus 9 ~~~~~~~~~~~~~~hy~l~L~id~~~~~~~G~v~I~i~~-~~~~~I~L~~~~l~I~~v~v~g~~----------~~~-~~ 76 (794)
+-..++....++|.||+|.|++|+++.+|+|+|+|++.+ .+++.|+||+++|+|.+|+|++.. +.. .+
T Consensus 63 p~~~~RLP~~v~P~hY~L~L~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~I~~v~v~~~~~~~~~~~~~~~~~~~~ 142 (967)
T 3se6_A 63 PWQELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSY 142 (967)
T ss_dssp SCCCSSCCTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCCSEEEEECSSCEEEEEEEEECC---CCSSCEECEEEEE
T ss_pred CcccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEEEcCCCEEEEECCCCEEEEEEEeccCCcccccccceeeeEEe
Confidence 334567788999999999999999999999999999987 468999999999999999986321 111 00
Q ss_pred CCCCcccchhhhhccccCCCCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhHHhhhcccCCCCCCccCCC-ce
Q 003808 77 YPHNHQNVENEKRWRSMVSSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQN-VK 155 (794)
Q Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~l~I~~~~p~~~~~~~~~~~~l~~~~~~~g~~~~~-~~ 155 (794)
. ....|.|.++. .++.|. .+++ .+.|+|.++.. .|
T Consensus 143 ~--------------------------------------~~~~l~i~l~~---~L~~g~-~~~l--~i~y~g~~~~~~~G 178 (967)
T 3se6_A 143 P--------------------------------------AHEQIALLVPE---KLTPHL-KYYV--AMDFQAKLGDGFEG 178 (967)
T ss_dssp G--------------------------------------GGTEEEEECSS---CCCTTC-CEEE--EEEEEEECBSSSSE
T ss_pred c--------------------------------------CCCEEEEEcCC---ccCCCC-eEEE--EEEEEEecCCCccc
Confidence 0 01136665543 232222 2334 37888888764 59
Q ss_pred EEEEEEEEeccCcceEEEeceEecccccCCcceEEeeCCCCCCeeEEEEEEEEeCCeEEEEcCcccceeeccCCCCceEE
Q 003808 156 LVRIDYWVEKVEVGIHFDGNALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQNLIAVSAGSLLYQVLSKDDPPRKTY 235 (794)
Q Consensus 156 ~~~~~y~~~~~~~G~~f~~~~~~T~~e~~~Ar~wfPC~D~p~~katf~l~i~~p~~~~avsng~l~~~~~~~~~~~~~~~ 235 (794)
+|++.|... +|. ..++++|||||.+||+||||||+|++||+|+|+|++|++|+|+|||++.++.. .+++++++
T Consensus 179 ~y~s~y~~~---~g~--~~~~~~Tq~ep~~AR~~FPC~DeP~~KAtf~itI~~p~~~~alSN~~~~~~~~--~~~g~~~~ 251 (967)
T 3se6_A 179 FYKSTYRTL---GGE--TRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNMPKVKTIE--LEGGLLED 251 (967)
T ss_dssp EEEEEEECT---TSC--EEEEEEEECTTTTGGGTSCBCCSTTCCBEEEEEEEECTTCEEEESSCEEEEEE--CTTSCEEE
T ss_pred eeeeeeEcC---CCc--eEEEEEEecccCCCCeEEEecCCcCceeEEEEEEEECCCcEEEeCCCccccee--cCCCeEEE
Confidence 999998642 342 25688999999999999999999999999999999999999999999976543 35688999
Q ss_pred EEecCCCCcceeeEEEEeeceEeecC--CCCcEEEEEcCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEECCC
Q 003808 236 VYRLDVPVSAKWITLAVAPFEVLPDH--HQSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFLAPE 313 (794)
Q Consensus 236 ~f~~t~p~s~y~iafavg~f~~~~~~--~~~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~vp~~ 313 (794)
+|..++|||+|++||+||+|+.++.. .+.++++|++|+..++++++++.+.++++|||++||+||||+||++|++|++
T Consensus 252 ~F~~t~pmstYLva~~vg~f~~~~~~~~~gv~v~v~~~p~~~~~~~~al~~~~~~l~~~e~~fg~~YP~~k~d~v~vPdf 331 (967)
T 3se6_A 252 HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDF 331 (967)
T ss_dssp EECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECGGGGGGGHHHHHHHHHHHHHHHHHHTCCCCSSEEEEEEESSC
T ss_pred EEecCCCccceeEEEEEeceEEEEeecCCCcEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccEEEecCC
Confidence 99999999999999999999998753 4678999999999999999999999999999999999999999999999998
Q ss_pred Ccccccccccchhhh-ccccccCcccchhhh--HHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHhcC
Q 003808 314 MAVSSSTFGAAMGIF-SSQILYDEKVIDQAI--DTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLG 390 (794)
Q Consensus 314 ~~~~~~~~gagl~~~-~~~lL~~~~~~~~~~--~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EGfA~y~~~~~~~~~~G 390 (794)
..++||+| ||++| ++.+|+++...+... ....+||||+|||||||+|||+||+|+|||||||+|++++++++.+|
T Consensus 332 ~~GaMEn~--Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFGnlVT~~wW~dlWLnEGFAty~e~~~~~~~~p 409 (967)
T 3se6_A 332 APGAMENW--GLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYP 409 (967)
T ss_dssp SSSEECCT--TEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHHCG
T ss_pred CCcccccC--CccccchhheecCcccCCHHhhHhHHHHHHHHHHHHHhcCccccCCCccccHHHHHHHHHHHHHHHHhcc
Confidence 88999999 78999 566889887543322 23458999999999999999999999999999999999999999988
Q ss_pred chhHHHHHHHhhcceeeeccCCCcccCCCCcccc----CC-CCcccccccceeeehHHHHHHHHHHhhchHHHHHHHHHH
Q 003808 391 NNEARYRRYKANCAVCKADDSGATALSSSASCKD----LY-GTQCIGIFGKIRSCKSVAILQMLEKQMGSNFFRKILQNI 465 (794)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~-~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~~~L~~y 465 (794)
.....-........ ++..++..+.++ +. +.++..+|+.++|.||++|||||+..||++.|+++|+.|
T Consensus 410 ~~~~~~~~~~~~~~--------al~~D~~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KGa~vL~mL~~~lG~e~F~~gLr~Y 481 (967)
T 3se6_A 410 ELQFDDYFLNVCFE--------VITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQY 481 (967)
T ss_dssp GGCHHHHHHHHHHH--------HHTTTTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHH--------HHHhhcccCCCCceeecCCHHHHHHhcchhhhhHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 76531000111111 111111111122 21 234556899999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCHHHHHHHHHHhcC------------------------CCcccHHhHHHhhhcCCCccEEEEEEEEe
Q 003808 466 ISRAQGASPVRTLSTKEFRHFANKVGN------------------------LERPFLKEFFPRWVGTCGCPVLRMGFSYN 521 (794)
Q Consensus 466 l~~~~~~~~~~~~st~~f~~~~e~~~~------------------------~~~~dl~~f~~~Wv~~~G~P~l~v~~~~~ 521 (794)
++++++++ ++++||++.++++.. .++.||++||++|+.|+|+|+|+|+++
T Consensus 482 l~~~~~~n----at~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~~q~G~Pvl~V~~~-- 555 (967)
T 3se6_A 482 LKKFSYRN----AKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWTLQKGIPLLVVKQD-- 555 (967)
T ss_dssp HHHHTTEE----ECHHHHHHHHHCC-------------------------CCCCCCHHHHHHHHHHSCSCEEEEEEEE--
T ss_pred HHHhccCC----CCHHHHHHHHHHHhhhccccccccccccccccccccccccCCcCHHHHHHHHhcCCCCcEEEEEec--
Confidence 99999996 689999998887521 146799999999999999999999873
Q ss_pred ccCcEEEEEEEeecCCCCCCCCccccCCCCCCCCCCCCCCcceeEEEEEecCCcccccccccCCCcceEEEeeecccchh
Q 003808 522 KRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDGDIGWPGMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSKLAA 601 (794)
Q Consensus 522 ~~~~~v~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pltiri~e~dg~~~~~~~~~~~~~~~~~~i~~~~k~~~ 601 (794)
++.+.|+|+|+....... .++.........|++|+++.... +++....+ +. ..-..
T Consensus 556 --~~~~~l~Q~rf~~~~~~~-------~~~~~~~~~~~~W~IPl~~~~~~-~~~~~~~~--l~-~~~~~----------- 611 (967)
T 3se6_A 556 --GCSLRLQQERFLQGVFQE-------DPEWRALQERYLWHIPLTYSTSS-SNVIHRHI--LK-SKTDT----------- 611 (967)
T ss_dssp --TTEEEEEEEECCCC------------------CCSCCCCCCEEEEESS-CCCCEEEC--CC-SSEEE-----------
T ss_pred --CCEEEEEeeeecCCCCCC-------ccccccccCCceEEEEEEEEeCC-CCccceEE--ec-CCceE-----------
Confidence 457899999986421100 00000001245899999997643 22211111 00 00000
Q ss_pred hhhcCCCCCCCCCCCCCCCCccccccccccCCCCeeEEEecCCCceEEEEcccCc-HHHHHHHHhhcC---ChHH--HH-
Q 003808 602 RRALKPKKGSKPDGCDDNGDAVAGLDMRSSMESPLSWIRADPEMEYLAEIHFNQP-VQMWINQLEKDG---DVVA--QA- 674 (794)
Q Consensus 602 ~r~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~wir~D~~~~~l~~v~~~~~-~~m~~~qL~~d~---dv~a--q~- 674 (794)
+ ...++.+||.+|+++.++|||+++.. +...+.+|+.++ ++.. |+
T Consensus 612 ---------------------i-------~~~~~~~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li 663 (967)
T 3se6_A 612 ---------------------L-------DLPEKTSWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLI 663 (967)
T ss_dssp ---------------------E-------ECSSCCSCEEESGGGCSSCEEEEETTHHHHHHHHHHHHGGGSCHHHHHHHH
T ss_pred ---------------------E-------eccCCCceEEEeCCccEEEEEecCHHHHHHHHHHHhhccCCCCHHHHHHHH
Confidence 0 01123479999999999999966543 233467887665 3333 33
Q ss_pred HHHHHHHcCCCCchhHHHHHHHHhccCcchhHHHHHHHHHHHhhccccccc--cch-HHHHHHHHhcCCCC---CCCCCC
Q 003808 675 QAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDW--AGL-LHLVKFYKSRRFDE---NIGLPR 748 (794)
Q Consensus 675 eai~~l~~~~~~~~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~~~--~g~-~~l~~~f~~~~~~~---~~~i~~ 748 (794)
+.+.+|++....+....--|.+.|.+|+. |-|...|...|..+..-...- ... ..+.++.++. ..| ..+..
T Consensus 664 ~D~~~la~~g~~~~~~~l~l~~~l~~E~~-~~~w~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~lg~~- 740 (967)
T 3se6_A 664 HDVFQLVGAGRLTLDKALDMTYYLQHETS-SPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQY-FKPVIDRQSWS- 740 (967)
T ss_dssp HHHHHHHHTTSSCHHHHHHHTTGGGTCCC-HHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHT-THHHHHHCCSS-
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHhcCCCc-HHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH-HHHHHHHcCCC-
Confidence 66778888777777666667899999875 788888888888764321100 001 1222222221 110 00111
Q ss_pred CCCCCChHHHHHHHHHHHHHhccccCCCCChHHHHHHHHHhhh
Q 003808 749 PNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLK 791 (794)
Q Consensus 749 ~n~f~~~~~y~~~~~i~~a~~~~r~~~~~~p~~~~~fl~~~l~ 791 (794)
++ .+..+-.++..+...+|.. .+..|-.++.+.+.+.+.
T Consensus 741 ~~--~~~~~~~lR~~il~~ac~~--g~~~c~~~A~~~f~~~~~ 779 (967)
T 3se6_A 741 DK--GSVWDRMLRSALLKLACDL--NHAPCIQKAAELFSQWME 779 (967)
T ss_dssp CC--SCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHH
T ss_pred CC--CcHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHhhc
Confidence 12 2456666777777777777 455688888877766554
No 2
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=100.00 E-value=1.2e-80 Score=753.27 Aligned_cols=652 Identities=14% Similarity=0.193 Sum_probs=469.8
Q ss_pred cCCCCCCCCeEEEEEEEEEEEeccCcEEEEEEEEEEEc-CCcceEEEeccCceeeEEEEcCe---eeeeeeCCCCcccch
Q 003808 10 EETKVENSGAVVRHQKLCLSIDMEKHQIYGYTELEIAV-PDIGIVGLHAENLGIESVLVDGE---PTEFEYYPHNHQNVE 85 (794)
Q Consensus 10 ~~~~~~~~~~~~~hy~l~L~id~~~~~~~G~v~I~i~~-~~~~~I~L~~~~l~I~~v~v~g~---~~~~~~~~~~~~~~~ 85 (794)
-..++....+.|.||+|+|++|+++.+|.|+|+|++.+ .+++.|.||+++|+|.+|+|+|. ++.+.....
T Consensus 4 ~~~~rLp~~~~p~hY~l~L~~d~~~~~f~G~v~I~~~~~~~~~~I~L~~~~l~I~~v~v~~~~~~~~~~~~~~~------ 77 (897)
T 2xdt_A 4 WNKIRLPEYVIPVHYDLLIHANLTTLTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGAGERLSEEPLQV------ 77 (897)
T ss_dssp CCCSSCCSSEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCEEEEEEECSSCEEEEEEEEEC----CEEEECEE------
T ss_pred cccCcCCCCcEeeEEEEEEEEecCCCeEEEEEEEEEEEEcCCCEEEEEeCCCEEEEEEEEecCCccccccccee------
Confidence 44567778999999999999999999999999999986 45789999999999999999642 221111000
Q ss_pred hhhhccccCCCCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhHHhhhcccCCCCCCccCCC-ceEEEEEEEEe
Q 003808 86 NEKRWRSMVSSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQN-VKLVRIDYWVE 164 (794)
Q Consensus 86 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~l~I~~~~p~~~~~~~~~~~~l~~~~~~~g~~~~~-~~~~~~~y~~~ 164 (794)
........|+|.++.+ ++.|. .+++ .+.|+|.++.. .|+|++.|...
T Consensus 78 --------------------------~~~~~~~~l~i~l~~~---L~~g~-~~~L--~i~y~g~~~~~~~G~y~s~y~~~ 125 (897)
T 2xdt_A 78 --------------------------LEHPRQEQIALLAPEP---LLVGL-PYTV--VIHYAGNLSETFHGFYKSTYRTK 125 (897)
T ss_dssp --------------------------EEETTTTEEEEEEEEE---ECTTC-CEEE--EEEEEEECBSSSSEEEEEEEECT
T ss_pred --------------------------EEcCCCcEEEEEeCCc---cCCCC-EEEE--EEEEEEEeCCCCceeEeeeeecC
Confidence 0000112366655421 22221 1334 36788887654 59999988632
Q ss_pred ccCcceEEEeceEecccccCCcceEEeeCCCCCCeeEEEEEEEEeCCeEEEEcCcccceeeccCCCCceEEEEecCCCCc
Q 003808 165 KVEVGIHFDGNALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQNLIAVSAGSLLYQVLSKDDPPRKTYVYRLDVPVS 244 (794)
Q Consensus 165 ~~~~G~~f~~~~~~T~~e~~~Ar~wfPC~D~p~~katf~l~i~~p~~~~avsng~l~~~~~~~~~~~~~~~~f~~t~p~s 244 (794)
+|. .+++++|||||.+||+||||+|+|+.||+|+|+|++|++|+|+|||+++++... ++++++++|..++|||
T Consensus 126 ---~g~--~~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~itI~~p~~~~alSN~~~~~~~~~--~~g~~~~~f~~t~pms 198 (897)
T 2xdt_A 126 ---EGE--LRILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTV--AEGLIEDHFDVTVKMS 198 (897)
T ss_dssp ---TSC--EEEEEEEECTTTTHHHHSCBCCSTTSCBEEEEEEEECTTCEEEESSCEEEEEEE--ETTEEEEEECCCCSBC
T ss_pred ---CCc--eeEEEEecceecccceEEeccCCccccCeEEEEEEEcCCceEecCCCccceEec--CCCEEEEEEeCCCccc
Confidence 343 256789999999999999999999999999999999999999999998875432 3578999999999999
Q ss_pred ceeeEEEEeeceEeec--CCCCcEEEEEcCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEECCCCcccccccc
Q 003808 245 AKWITLAVAPFEVLPD--HHQSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFLAPEMAVSSSTFG 322 (794)
Q Consensus 245 ~y~iafavg~f~~~~~--~~~~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~vp~~~~~~~~~~g 322 (794)
+|++||+||+|+.++. ..+.++++|++|+..+.++++++.+.++++|||++||+||||+||++|++|++..++||||
T Consensus 199 tYL~a~~vg~f~~~~~~~~~gv~v~v~~~~~~~~~~~~al~~~~~~l~~~e~~fg~~YP~~k~d~v~vpdf~~GaMEn~- 277 (897)
T 2xdt_A 199 TYLVAFIISDFESVSKITKSGVKVSVYAVPDKINQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENW- 277 (897)
T ss_dssp GGGCCEEEECCEEEEEECTTCCEEEEEECTTTGGGCHHHHHHHHHHHHHHHHHTTCCCCSSEEEEEEESSCSSSEECCT-
T ss_pred hhheEEEEEcceeeccccCCCeeEEEEcCCChHHHHHHHHHHHHHHHHHHHHHhCCCCCccceeEEEeCCCcccchhcC-
Confidence 9999999999999876 3357899999999999999999999999999999999999999999999998888999999
Q ss_pred cchhhhc-cccccCcccchhh--hHHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHhcCchhH--HHH
Q 003808 323 AAMGIFS-SQILYDEKVIDQA--IDTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEA--RYR 397 (794)
Q Consensus 323 agl~~~~-~~lL~~~~~~~~~--~~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EGfA~y~~~~~~~~~~G~~~~--~~~ 397 (794)
||++|+ +.+|+++...+.. .....+||||+|||||||+|||+||+|+|||||||+|++++++++.+|.... .|
T Consensus 278 -glit~~e~~ll~~~~~~~~~~~~~~~~viaHElAHqWFGnlVT~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~f- 355 (897)
T 2xdt_A 278 -GLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF- 355 (897)
T ss_dssp -TEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHHCGGGCGGGGH-
T ss_pred -CeeEEeeeeEeECCCCCcHHHHHHHHHHHHHHHHHHHcCCEeccCCcchhhhhHHHHHHHHHHHHHHhCCcchHHHHH-
Confidence 789994 5689998765432 2334589999999999999999999999999999999999999999876532 12
Q ss_pred HHHhhcceeeeccC-CCcccCCCCccccCC-CCcccccccceeeehHHHHHHHHHHhhchHHHHHHHHHHHHhhcCCCCC
Q 003808 398 RYKANCAVCKADDS-GATALSSSASCKDLY-GTQCIGIFGKIRSCKSVAILQMLEKQMGSNFFRKILQNIISRAQGASPV 475 (794)
Q Consensus 398 ~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~-~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~~~L~~yl~~~~~~~~~ 475 (794)
. ......+..|.. ...|+ ..++. +.++...|+.++|.||++|||||+..||++.|+++|+.|++++++++
T Consensus 356 ~-~~~~~a~~~D~~~~~~Pi-----~~~v~~p~~i~~~fd~i~Y~KGa~vl~mL~~~lG~e~F~~gl~~Yl~~~~~~~-- 427 (897)
T 2xdt_A 356 F-GKCFDAMEVDALNSSHPV-----STPVENPAQIREMFDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKN-- 427 (897)
T ss_dssp H-HHHHHHHHHHTSTTCCCS-----SCCCCSHHHHHHTSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTEE--
T ss_pred H-HHHHHHHHhhcccCCCCC-----EEeCCCHHHHHHhcchhhhhhHHHHHHHHHHHhCHHHHHHHHHHHHHHhccCC--
Confidence 1 111111111111 11111 11221 23455689999999999999999999999999999999999999986
Q ss_pred CCCCHHHHHHHHHHhcC---------------C-C--------cccHHhHHHhhhcCCCccEEEEEEEEeccCcEEEEEE
Q 003808 476 RTLSTKEFRHFANKVGN---------------L-E--------RPFLKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAV 531 (794)
Q Consensus 476 ~~~st~~f~~~~e~~~~---------------~-~--------~~dl~~f~~~Wv~~~G~P~l~v~~~~~~~~~~v~l~~ 531 (794)
+++++|++.++++.. . + +.||++||++|++++|+|+++|+++ ++.+.|+|
T Consensus 428 --a~~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~g~dl~~~~~~W~~q~G~P~l~v~~~----~~~~~l~Q 501 (897)
T 2xdt_A 428 --TKNEDLWDSMASICPTDGVKGMDGFCSRSQHSSSSSHWHQEGVDVKTMMNTWTLQKGFPLITITVR----GRNVHMKQ 501 (897)
T ss_dssp --ECHHHHHHHHHTC----------------------------CCCHHHHHHHHHSSCSEEEEEEEEE----TTEEEEEE
T ss_pred --CCHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCHHHHHHHhhcCCCceEEEEEEc----CCEEEEEE
Confidence 689999998887510 1 1 5799999999999999999999875 35678888
Q ss_pred EeecCCCCCCCCccccCCCCCCCCCCCCCCcceeEEEEEecCCcccccccccCCCcceEEEeeecccchhhhhcCCCCCC
Q 003808 532 LRDCTVKPDSRTPVLSSNTDSENRDGDIGWPGMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSKLAARRALKPKKGS 611 (794)
Q Consensus 532 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pltiri~e~dg~~~~~~~~~~~~~~~~~~i~~~~k~~~~r~~k~~~~~ 611 (794)
+|+..... . .. .....|++|+++.... +... +. .| +...+. .
T Consensus 502 ~~f~~~~~----------~--~~-~~~~~w~iPi~~~~~~-~~~~-~~-------~~----l~~~~~----~-------- 543 (897)
T 2xdt_A 502 EHYMKGSD----------G--AP-DTGYLWHVPLTFITSK-SDMV-HR-------FL----LKTKTD----V-------- 543 (897)
T ss_dssp EEECCC------------------CCCCCCCEEEEEEESS-CSSC-EE-------EE----ECSSEE----E--------
T ss_pred EEeecCCC----------C--CC-CCCceEEEEEEEEeCC-CCcc-ce-------EE----ecCCce----E--------
Confidence 88753211 0 00 1234799999986421 1111 11 11 110000 0
Q ss_pred CCCCCCCCCCccccccccccCCCCeeEEEecCCCceEEEEcccCcH-HHHHHHHhhcC---ChHHH---HHHHHHHHcCC
Q 003808 612 KPDGCDDNGDAVAGLDMRSSMESPLSWIRADPEMEYLAEIHFNQPV-QMWINQLEKDG---DVVAQ---AQAIAALEALP 684 (794)
Q Consensus 612 ~~~~~~~~~d~~~~~~~~~~~~~~~~wir~D~~~~~l~~v~~~~~~-~m~~~qL~~d~---dv~aq---~eai~~l~~~~ 684 (794)
+ ....+.+||.+|++..++|||+++... ...+.+|..++ ++..| ++++.+|++..
T Consensus 544 -----------~-------~~~~~~~~i~~N~~~~gyyrV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g 605 (897)
T 2xdt_A 544 -----------L-------ILPEEVEWIKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIG 605 (897)
T ss_dssp -----------E-------ECSSCCSCEEESGGGCSSCEEEECTTHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHTTT
T ss_pred -----------E-------EccCCCceEEECCCceEEEEEEcCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcC
Confidence 0 011234799999999999999775432 24477887766 45433 37778888877
Q ss_pred CCchhHHHHHHHHhccCcchhHHHHHHHHHHHhhccc---cccc---cchH-----HHHHHHHhcCCCCCCCCCCCCCCC
Q 003808 685 HLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASE---ETDW---AGLL-----HLVKFYKSRRFDENIGLPRPNDFR 753 (794)
Q Consensus 685 ~~~~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~---~~~~---~g~~-----~l~~~f~~~~~~~~~~i~~~n~f~ 753 (794)
..+......|.+.|.+|+. |-|...|...|..+... ...+ ..+. .+...|.+.-+.+ + .
T Consensus 606 ~~~~~~~l~l~~~l~~E~~-~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~-------~--~ 675 (897)
T 2xdt_A 606 KLSIEKALDLSLYLKHETE-IMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLIDKQTWTD-------E--G 675 (897)
T ss_dssp SSCHHHHHHHHGGGGGCCC-HHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTCCSSC-------C--S
T ss_pred CCCHHHHHHHHHHhcCCCc-HHHHHHHHHHHHHHHHHhcCChhhhHHHHHHHHHHHHHHHHHHHcCCCC-------C--C
Confidence 7777666668899999875 77888888877765432 1111 1111 1122233322221 1 2
Q ss_pred ChHHHHHHHHHHHHHhccccCCCCChHHHHHHHHHhhh
Q 003808 754 DFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLK 791 (794)
Q Consensus 754 ~~~~y~~~~~i~~a~~~~r~~~~~~p~~~~~fl~~~l~ 791 (794)
+...-.++..|...+|.+ .+..|-.++++.+.+.+.
T Consensus 676 ~~~~~~lr~~~~~~ac~~--g~~~c~~~a~~~f~~~~~ 711 (897)
T 2xdt_A 676 SVSERMLRSQLLLLACVH--NYQPCVQRAEGYFRKWKE 711 (897)
T ss_dssp CHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHhc
Confidence 344445666777778877 455688888887766554
No 3
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=100.00 E-value=9.1e-81 Score=756.14 Aligned_cols=663 Identities=14% Similarity=0.191 Sum_probs=465.0
Q ss_pred CCcCCCCCCCCeEEEEEEEEEEEeccC-----cEEEEEEEEEEEc-CCcceEEEeccCceeeEE----EEcCe---e-e-
Q 003808 8 KNEETKVENSGAVVRHQKLCLSIDMEK-----HQIYGYTELEIAV-PDIGIVGLHAENLGIESV----LVDGE---P-T- 72 (794)
Q Consensus 8 ~~~~~~~~~~~~~~~hy~l~L~id~~~-----~~~~G~v~I~i~~-~~~~~I~L~~~~l~I~~v----~v~g~---~-~- 72 (794)
++-..++....++|.||+|.|++|++. .+|+|.|+|++.+ .+++.|+||+++|+|..+ .+.+. . .
T Consensus 4 ~P~~~yRLP~~v~P~hY~l~L~~~l~~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~i~~~~~~~~~~~~~~~~~~~ 83 (909)
T 4fke_A 4 KPWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYTTQGHMVVLRGVGDSQVPE 83 (909)
T ss_dssp CGGGSSSCCSSEEEEEEEEEEEECCSCCSSSCCEEEEEEEEEEEESSCEEEEEEECCSCEECCSSSSCEEEESTTCCCCC
T ss_pred CCcccccCcCCCEeEEEEEEEEEcCcCCCCCCceEEEEEEEEEEEecCCCEEEEEcCCCEEEeeeeEEEEecCCCcceec
Confidence 344567888999999999999998753 4799999999987 468999999999999752 22211 0 0
Q ss_pred --eeeeCCCCcccchhhhhccccCCCCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhHHhhhcccCCCCCCcc
Q 003808 73 --EFEYYPHNHQNVENEKRWRSMVSSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEP 150 (794)
Q Consensus 73 --~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~l~I~~~~p~~~~~~~~~~~~l~~~~~~~g~~ 150 (794)
...+. .....|+|.++. .++.|. .+++. +.|+|.+
T Consensus 84 ~~~~~~~-------------------------------------~~~~~l~i~l~~---~l~~g~-~~~l~--i~y~g~~ 120 (909)
T 4fke_A 84 IDRTELV-------------------------------------ELTEYLVVHLKG---SLQPGH-MYEME--SEFQGEL 120 (909)
T ss_dssp EEEEEEE-------------------------------------TTTTEEEEEEEE---EECTTC-EEEEE--EEEEEEC
T ss_pred ccceEEe-------------------------------------cCCcEEEEEcCC---CcCCCC-EEEEE--EEEEEEE
Confidence 01111 011236676542 222222 23443 6889988
Q ss_pred CCC-ceEEEEEEEEeccCcceEEEeceEecccccCCcceEEeeCCCCCCeeEEEEEEEEeCCeEEEEcCcccceee-ccC
Q 003808 151 KQN-VKLVRIDYWVEKVEVGIHFDGNALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQNLIAVSAGSLLYQVL-SKD 228 (794)
Q Consensus 151 ~~~-~~~~~~~y~~~~~~~G~~f~~~~~~T~~e~~~Ar~wfPC~D~p~~katf~l~i~~p~~~~avsng~l~~~~~-~~~ 228 (794)
+.. .|+|++.|... .. .+++++|||||.+||+||||||+|++||||+|+|++|++|+|+|||+++++.. ..+
T Consensus 121 ~~~~~G~y~s~y~~~--~~----~~~~~~Tqfep~~AR~~FPc~DeP~~KAtf~i~i~~p~~~~alSN~~~~~~~~~~~~ 194 (909)
T 4fke_A 121 ADDLAGFYRSEYMEG--NV----KKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAE 194 (909)
T ss_dssp CSSSSEEEEEEEEET--TE----EEEEEEEECTTTTGGGTSCBCCSTTSCBEEEEEEEEETTSEEEESSCBSSSCEECTT
T ss_pred CCCCeEEEEeeEEEC--Cc----eEEEEEEcCcccCcCEEEEeCCccccceEEEEEEEECCCCEEEcCCcccccccceec
Confidence 765 49999999752 12 26789999999999999999999999999999999999999999999876543 234
Q ss_pred CCCceEEEEecCCCCcceeeEEEEeeceEeecCC--CCcEEEEEcCCchhH--HHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 003808 229 DPPRKTYVYRLDVPVSAKWITLAVAPFEVLPDHH--QSLMSHICLPANVSK--IHNTVEFFHNAFSHYETYLDAKFPFGS 304 (794)
Q Consensus 229 ~~~~~~~~f~~t~p~s~y~iafavg~f~~~~~~~--~~~v~~~~~p~~~~~--~~~~~~~~~~~l~~~e~~~g~~YP~~k 304 (794)
++++++++|..++|||+|++||+||+|+.++... +.++++|++|+..++ .+++++.+.++++|||++||+||||+|
T Consensus 195 ~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~g~~~~v~~~p~~~~~~~~~~al~~~~~~l~~~e~~~~~~Yp~~k 274 (909)
T 4fke_A 195 DPNWSVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNTSYPLPK 274 (909)
T ss_dssp CTTEEEEEBCCCCSBCGGGCCEEEESCEEEEEECTTSCEEEEEECHHHHHTTTTHHHHHHHHHHHHHHHHHTTSCCSSSE
T ss_pred CCCeEEEEEecCCCccceeeEEEecceEEEeeccCCCcEEEEEEecchhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCc
Confidence 6789999999999999999999999999887643 578999999997654 468999999999999999999999999
Q ss_pred ccEEEECCCCcccccccccchhhh-ccccccCcccchhhhH--HHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHH
Q 003808 305 YKQVFLAPEMAVSSSTFGAAMGIF-SSQILYDEKVIDQAID--TSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLT 381 (794)
Q Consensus 305 ~~~V~vp~~~~~~~~~~gagl~~~-~~~lL~~~~~~~~~~~--~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EGfA~y~~ 381 (794)
+++|++|++..++|||| ||++| ++.+|+++........ ...+||||||||||||+|||+||+|+|||||||+|++
T Consensus 275 ~d~v~vpdf~~gaMEn~--glit~~e~~ll~d~~~s~~~~~~~~~~viaHElAHqWFGnlVT~~~W~dlWLnEGFAty~e 352 (909)
T 4fke_A 275 SDQIALPDFNAGAMENW--GLVTYRENALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVE 352 (909)
T ss_dssp EEEEEETTCTTCEECCT--TEEEEEHHHHCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHH
T ss_pred ccEEEecCCCCcccccC--cccccccceeecCcccCChHHHHHHHHHHHHHHHhhhhcCeecccccCcceeehHHHHHHH
Confidence 99999999889999999 78999 5678999876544332 3458999999999999999999999999999999999
Q ss_pred HHHHHHhcCchhHHHH-HHHhhcceeeecc-CCCcccCCCCccccC-CCCcccccccceeeehHHHHHHHHHHhhchHHH
Q 003808 382 DSFIKKFLGNNEARYR-RYKANCAVCKADD-SGATALSSSASCKDL-YGTQCIGIFGKIRSCKSVAILQMLEKQMGSNFF 458 (794)
Q Consensus 382 ~~~~~~~~G~~~~~~~-~~~~~~~~~~~~~-~~~~~l~~~~~~~~~-~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F 458 (794)
++++++.+|.....-. ...........+. ....++..+ ..++ .+.++..+|+.++|.||++|||||+..||++.|
T Consensus 353 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~d~~~~~~pi~~~--~~~v~~~~~i~~~fd~i~Y~KGa~vL~mL~~~lG~e~F 430 (909)
T 4fke_A 353 YLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTP--AEEVNTPAQISEMFDSISYSKGASVIRMLSNFLTEDLF 430 (909)
T ss_dssp HHHHHHHSTTSCGGGGHHHHTHHHHHHHHTSTTCCCSCCC--GGGCCSHHHHHTTSSHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHhccccccHHHhhhhhHHHHHHHHhhhcccCCcccc--ccccCChhhHHhhhhhHHHHHHHHHHHHHHHHhHHHHH
Confidence 9999999887643110 0000000001111 111111110 1112 123556789999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhcCCC-----cccHHhHHHhhhcCCCccEEEEEEEEeccCcEEEEEEEe
Q 003808 459 RKILQNIISRAQGASPVRTLSTKEFRHFANKVGNLE-----RPFLKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLR 533 (794)
Q Consensus 459 ~~~L~~yl~~~~~~~~~~~~st~~f~~~~e~~~~~~-----~~dl~~f~~~Wv~~~G~P~l~v~~~~~~~~~~v~l~~~q 533 (794)
+++|+.|++++++++ ++++||++.++++++.. +.++++||++|++|+|+|+|+|+.+ .. .++|+|
T Consensus 431 ~~gl~~Yl~~~~~~n----a~~~Dl~~~l~~~s~~~~~~~~~~~v~~~~~~W~~q~G~Pvv~V~~~----~~--~~~q~~ 500 (909)
T 4fke_A 431 KEGLASYLHAFAYQN----TTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPVITVDTK----TG--NISQKH 500 (909)
T ss_dssp HHHHHHHHHHHTTEE----ECHHHHHHHHHHHHHTCSSCCCSSCHHHHHHHHHSSCSCEEEEEETT----TT--EEEEEE
T ss_pred HHHHHHHHHhhcccC----CCHHHHHHHHHHHhCcccccccchhHHhHhhCccccCCCcEEEEEec----cC--cEEEEE
Confidence 999999999999996 68999998888876421 2469999999999999999999642 22 467888
Q ss_pred ecCCCCCCCCccccCCCCCCCCCCCCCCcceeEEEEEecCCcccccccccCCCcceEEEeeecccchhhhhcCCCCCCCC
Q 003808 534 DCTVKPDSRTPVLSSNTDSENRDGDIGWPGMMSIRVHELDGMYDHPILPMAGDAWQLLEIQCHSKLAARRALKPKKGSKP 613 (794)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pltiri~e~dg~~~~~~~~~~~~~~~~~~i~~~~k~~~~r~~k~~~~~~~ 613 (794)
+........ .........|++|+++.. +|..... .|. .+. .. ..
T Consensus 501 ~~~~~~~~~---------~~~~~~~~~w~IPl~~~~---~~~~~~~-------~~~-~~~---~~------~~------- 544 (909)
T 4fke_A 501 FLLDSESNV---------TRSSAFDYLWIVPISSIK---NGVMQDH-------YWL-RDV---SQ------AQ------- 544 (909)
T ss_dssp CCSCTTCCC---------CSCCTTTTCCCEEECEEE---TTEECCC-------EEE-CSC---SE------EE-------
T ss_pred EEeccCCCC---------CCCCCCCceEEEEEEEEe---CCCccce-------EEe-ecc---cc------ce-------
Confidence 754321100 001123457999998754 2321110 010 000 00 00
Q ss_pred CCCCCCCCccccccccccCCCCeeEEEecCCCceEEEEcccCcHHHH---HHHHhhcCChH-----HHH-HHHHHHHcCC
Q 003808 614 DGCDDNGDAVAGLDMRSSMESPLSWIRADPEMEYLAEIHFNQPVQMW---INQLEKDGDVV-----AQA-QAIAALEALP 684 (794)
Q Consensus 614 ~~~~~~~d~~~~~~~~~~~~~~~~wir~D~~~~~l~~v~~~~~~~m~---~~qL~~d~dv~-----aq~-eai~~l~~~~ 684 (794)
.+ + ....+.+||.+|+++.++|||++ ++.+| +.+|+.+++.+ +|+ +.+.+|++..
T Consensus 545 ------~~-~-------~~~~~~~wi~~N~~~~gyyRV~Y--d~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~ag 608 (909)
T 4fke_A 545 ------ND-L-------FKTASDDWVLLNVNVTGYFQVNY--DEDNWRMIQHQLQTNLSVIPVINRAQVIYDSFNLATAH 608 (909)
T ss_dssp ------CG-G-------GCCCTTCCEEESGGGCSSCEEEE--CHHHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred ------ee-e-------ccCCCCCeEEECCCceEEEEEec--CHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcC
Confidence 00 0 01123479999999999999955 55555 67888776544 233 6667788877
Q ss_pred CCchhHHHHHHHHhccCcchhHHHHHHHHHHHhhcccc--cc-ccchH-H----HHHHHHhcCCCCCCCCCCCCCCCChH
Q 003808 685 HLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEE--TD-WAGLL-H----LVKFYKSRRFDENIGLPRPNDFRDFS 756 (794)
Q Consensus 685 ~~~~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~--~~-~~g~~-~----l~~~f~~~~~~~~~~i~~~n~f~~~~ 756 (794)
..+.....-|.+.|.+|+. |-|...|...|..+...- .. +..+. + +...|++.-......-.++ .+..
T Consensus 609 ~~~~~~~l~l~~~l~~E~~-y~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~---~~~~ 684 (909)
T 4fke_A 609 MVPVTLALDNTLFLNGEKE-YMPWQAALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERP---ENLM 684 (909)
T ss_dssp SSCHHHHHHTTGGGGGCCS-HHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTSCC---SSHH
T ss_pred CCCHHHHHHHHHHHccCcc-HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhhhhccccccc---ccHH
Confidence 7776666667888999875 788889988888765421 11 11111 1 1122322111110001111 3566
Q ss_pred HHHHHHHHHHHHhccccCCCCChHHHHHHHHHhhh
Q 003808 757 EYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLK 791 (794)
Q Consensus 757 ~y~~~~~i~~a~~~~r~~~~~~p~~~~~fl~~~l~ 791 (794)
.-+++..+...+|.. .+..|-.++++.+-+.+.
T Consensus 685 ~~~lr~~~l~~ac~~--g~~~c~~~a~~~f~~~~~ 717 (909)
T 4fke_A 685 DQYSEINAISTACSN--GLPQCENLAKTLFDQWMS 717 (909)
T ss_dssp HHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHhh
Confidence 666777777777776 455677777777665543
No 4
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=100.00 E-value=9e-79 Score=721.78 Aligned_cols=543 Identities=13% Similarity=0.132 Sum_probs=416.2
Q ss_pred CCCCCCeEEEEEEEEEEEeccCcEEEEEEEEEEEcC-CcceEEEeccCceeeEEEEcCeeee----eeeCCCCcccchhh
Q 003808 13 KVENSGAVVRHQKLCLSIDMEKHQIYGYTELEIAVP-DIGIVGLHAENLGIESVLVDGEPTE----FEYYPHNHQNVENE 87 (794)
Q Consensus 13 ~~~~~~~~~~hy~l~L~id~~~~~~~G~v~I~i~~~-~~~~I~L~~~~l~I~~v~v~g~~~~----~~~~~~~~~~~~~~ 87 (794)
-.+++++.+.||+|+|++|+++..++|+++|++... +++.|.||+++|+|.+|+|||+++. |.+.+
T Consensus 8 dy~~~~~~V~h~~L~l~ld~~~~~v~G~~~i~~~~~~~~~~l~LD~~~L~I~sV~vnG~~l~~~~~~~~~~--------- 78 (889)
T 3ebh_A 8 DYKPSGFIINQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLKINEISINNKKLVEGEEYTYDN--------- 78 (889)
T ss_dssp GCCCCSEEEEEEEEEEEECSSCEEEEEEEEEEECTTCCSCCEEEECCSCEEEEEEETTEECCBTTTEEECS---------
T ss_pred CCCCCCcEEEEEEEEEEEeCCCeEEEEEEEEEEecCCCCceEEEECCCCEEEEEEECCEEcCcccceEecC---------
Confidence 466789999999999999999999999999998754 4789999999999999999998753 33321
Q ss_pred hhccccCCCCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhHHhhhcccCCCCCCccCCCceEEEEEEEEeccC
Q 003808 88 KRWRSMVSSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQNVKLVRIDYWVEKVE 167 (794)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~l~I~~~~p~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~y~~~~~~ 167 (794)
..|+|.++. ++. +.++++ +.|+|.+... ..-
T Consensus 79 ------------------------------~~L~I~l~~----l~~--~~~~l~--I~y~~~p~~~-----------~~l 109 (889)
T 3ebh_A 79 ------------------------------EFLTIFSKF----VPK--SKFAFS--SEVIIHPETN-----------YAL 109 (889)
T ss_dssp ------------------------------SEEEECGGG----SCS--SSEEEE--EEEEECGGGC-----------TTC
T ss_pred ------------------------------CEEEEecCC----CCC--CcEEEE--EEEEecCccC-----------CCc
Confidence 136664321 110 111222 2233322110 011
Q ss_pred cceEEEeceEecccccCCcceEEeeCCCCCCeeEEEEEEEEeCC-e-EEEEcCcccceeeccCCCCceEEEEecCCCCcc
Q 003808 168 VGIHFDGNALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQN-L-IAVSAGSLLYQVLSKDDPPRKTYVYRLDVPVSA 245 (794)
Q Consensus 168 ~G~~f~~~~~~T~~e~~~Ar~wfPC~D~p~~katf~l~i~~p~~-~-~avsng~l~~~~~~~~~~~~~~~~f~~t~p~s~ 245 (794)
.|+++...+++|||||.+||+||||+|+|+.||||+++|++|++ | +++|||+++++... ++++++++|..++|||+
T Consensus 110 ~Gly~s~~~~~TQ~Ep~~AR~~fPC~DeP~~KAtf~itIt~p~~~~~valSNg~l~~~~~~--~~g~~~~~f~~t~pmst 187 (889)
T 3ebh_A 110 TGLYKSKNIIVSQCEATGFRRITFFIDRPDMMAKYDVTVTADKEKYPVLLSNGDKVNEFEI--PGGRHGARFNDPPLKPC 187 (889)
T ss_dssp SEEEEETTEEEEECTTTTGGGTSCBCCSTTCCEEEEEEEEEETTTCCEEEESSEEEEEEEE--TTTEEEEEEEEEEEECG
T ss_pred eeeEEECCeEEEcccCCCCCEEEEEcCCCCcceEEEEEEEEccccCeEEEccCccccceec--CCCeEEEEEecCCccch
Confidence 25555556899999999999999999999999999999999997 8 57999999876532 45789999999999999
Q ss_pred eeeEEEEeeceEeecC-----CC--CcEEEEEcCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEECCCCcccc
Q 003808 246 KWITLAVAPFEVLPDH-----HQ--SLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFLAPEMAVSS 318 (794)
Q Consensus 246 y~iafavg~f~~~~~~-----~~--~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~vp~~~~~~~ 318 (794)
|++||+||+|++++.. .+ .++++|++|+..+.++++++.++++|+|||++||++|||+||++|++|++..++|
T Consensus 188 YLvA~~vG~f~~~~~~~~t~~~G~~v~l~vy~~p~~~~~~~~al~~~~~~l~~~e~~fG~pYP~~kyd~VavPdF~~GaM 267 (889)
T 3ebh_A 188 YLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECLKKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAM 267 (889)
T ss_dssp GGCCEEEECEEEEEEEEECSSSCCEEEEEEEEEGGGGGGGHHHHHHHHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEE
T ss_pred hheeeEEecceEEeeeeeecCCCCceEEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHCCCCCCCceEEEEeccccchhh
Confidence 9999999999988652 22 4689999999999999999999999999999999999999999999998888999
Q ss_pred cccccchhhh-ccccccCcccc-hhhh-HHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHhcCchhHH
Q 003808 319 STFGAAMGIF-SSQILYDEKVI-DQAI-DTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEAR 395 (794)
Q Consensus 319 ~~~gagl~~~-~~~lL~~~~~~-~~~~-~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EGfA~y~~~~~~~~~~G~~~~~ 395 (794)
||| ||++| +..+|+++... +... ....+||||+|||||||+|||+||+|+|||||||+|++.++.+...|....+
T Consensus 268 EN~--GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHQWFGNlVT~~~W~dlWLnEGFAtY~e~~~~~~~~~~~~~r 345 (889)
T 3ebh_A 268 ENK--GLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDWFQLTLKEGLTVHRENLFSEEMTKTVTTR 345 (889)
T ss_dssp CCT--TEEEEEGGGTCCCTTTSCTHHHHHHHHHHHHHHHTTTBTTTBEESSGGGHHHHHHHHHHHHHHHHHHHHCCTHHH
T ss_pred cCC--ceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhcCeeeecccccceeeHHHHHHHHHHHHHHhcCHHHHH
Confidence 999 68889 55678877643 2222 2345899999999999999999999999999999999999999988877654
Q ss_pred HHHHHhhcceeeeccCCCcccCCCCccccCCC---CcccccccceeeehHHHHHHHHHHhhchHHHHHHHHHHHHhhcCC
Q 003808 396 YRRYKANCAVCKADDSGATALSSSASCKDLYG---TQCIGIFGKIRSCKSVAILQMLEKQMGSNFFRKILQNIISRAQGA 472 (794)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~~~L~~yl~~~~~~ 472 (794)
+.............+.+ +..+++.+ .++...|+.++|.||++|||||+..||++.|+++|+.|+++|+++
T Consensus 346 ~~~~~~lr~~~~~~D~~-------~~shPI~~~~~~ei~~~f~~i~Y~KGa~vLrML~~~lGde~F~~gLr~Yl~~~~~~ 418 (889)
T 3ebh_A 346 LSHVDLLRSVQFLEDSS-------PLSHPIRPESYVSMENFYTTTVYDKGSEVMRMYLTILGEEYYKKGFDIYIKKNDGN 418 (889)
T ss_dssp HHHHHHHHHHHHHHHTS-------TTCCCSSCSEESCGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhhhhccC-------ccCCCCCCcchhhhhhhccchhhhHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC
Confidence 33221111000011111 11223321 245668999999999999999999999999999999999999998
Q ss_pred CCCCCCCHHHHHHHHHHhcC----CCcccHHhHHHhhhcCCCccEEEEEEEEeccCcEEEEEEEeecCCCCCCCCccccC
Q 003808 473 SPVRTLSTKEFRHFANKVGN----LERPFLKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSS 548 (794)
Q Consensus 473 ~~~~~~st~~f~~~~e~~~~----~~~~dl~~f~~~Wv~~~G~P~l~v~~~~~~~~~~v~l~~~q~~~~~~~~~~~~~~~ 548 (794)
+ +++++|++.+++++. ..|.||.. |++|++++|+|+|+|+.+++.+++.++++++|......
T Consensus 419 n----att~Df~~ale~as~~~~~~~g~dL~~-f~~Wl~q~G~P~l~V~~~~d~~~~~~~ltl~Q~~~~~~--------- 484 (889)
T 3ebh_A 419 T----ATCEDFNYAMEQAYKMKKADNSANLNQ-YLLWFSQSGTPHVSFKYNYDAEKKQYSIHVNQYTKPDE--------- 484 (889)
T ss_dssp E----ECHHHHHHHHHHHHHHHHTCTTCCCTG-GGHHHHCCSCCEEEEEEEEETTTTEEEEEEEEECCCCS---------
T ss_pred C----CCHHHHHHHHHHHhhhccCCCCCCHHH-HHHHhcCCCCceEEEEEeecCCCCEEEEEEEEecCCCC---------
Confidence 6 799999999988760 01357886 68999999999999999999877888888888753210
Q ss_pred CCCCCCCCCCCCCcceeEEEEEec-CCcc---cccccccCCCcceEEEeeecccchhhhhcCCCCCCCCCCCCCCCCccc
Q 003808 549 NTDSENRDGDIGWPGMMSIRVHEL-DGMY---DHPILPMAGDAWQLLEIQCHSKLAARRALKPKKGSKPDGCDDNGDAVA 624 (794)
Q Consensus 549 ~~~~~~~~~~~~~~~pltiri~e~-dg~~---~~~~~~~~~~~~~~~~i~~~~k~~~~r~~k~~~~~~~~~~~~~~d~~~ 624 (794)
.......|.+|++|.+... +|.- .+ ++.+. +.-+.|.++.
T Consensus 485 -----~~~~~~~~~IPl~v~l~~~~~G~~~~~~~-~l~l~-~~~q~f~~~~----------------------------- 528 (889)
T 3ebh_A 485 -----NQKEKKPLFIPISVGLINPENGKEMISQT-TLELT-KESDTFVFNN----------------------------- 528 (889)
T ss_dssp -----SCSSCCCCCEEEEEEEECTTTCCBCSCCE-EEEEC-SSEEEEEESC-----------------------------
T ss_pred -----CCCCCceEEEEEEEEEEeCCCCcccccee-EEEec-CCcEEEEEcC-----------------------------
Confidence 0112347999999999887 7752 12 11111 1112222210
Q ss_pred cccccccCCCCeeEEEecCCCceEEEEcccCcHHHHHHHHhhcCChHHHHHHHHHHHc
Q 003808 625 GLDMRSSMESPLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVAQAQAIAALEA 682 (794)
Q Consensus 625 ~~~~~~~~~~~~~wir~D~~~~~l~~v~~~~~~~m~~~qL~~d~dv~aq~eai~~l~~ 682 (794)
..+.+ |+.+++++....++++++++.+++.||++|.|.++|.||++.|+.
T Consensus 529 -------~~~~p-~~sl~r~fsa~v~l~~~~~~~~l~~l~~~d~d~~~r~~a~~~l~~ 578 (889)
T 3ebh_A 529 -------IAVKP-IPSLFRGFSAPVYIEDQLTDEERILLLKYDSDAFVRYNSCTNIYM 578 (889)
T ss_dssp -------CCSCC-EEEESTTCCSSSEEECCCCHHHHHHHHHHCSCHHHHHHHHHHHHH
T ss_pred -------CCCCC-eEEEcCCCCceEEEeCCCCHHHHHHHHhhCCChhHHHHHHHHHHH
Confidence 01112 557999999999999999999999999999999999999988863
No 5
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=100.00 E-value=2.7e-78 Score=722.81 Aligned_cols=565 Identities=16% Similarity=0.192 Sum_probs=425.1
Q ss_pred CCCCCCCeEEEEEEEEEEEeccCcEEEEEEEEEEEcCCcceEEEeccCceeeEEEEcCeee-eeeeCCCCcccchhhhhc
Q 003808 12 TKVENSGAVVRHQKLCLSIDMEKHQIYGYTELEIAVPDIGIVGLHAENLGIESVLVDGEPT-EFEYYPHNHQNVENEKRW 90 (794)
Q Consensus 12 ~~~~~~~~~~~hy~l~L~id~~~~~~~G~v~I~i~~~~~~~I~L~~~~l~I~~v~v~g~~~-~~~~~~~~~~~~~~~~~~ 90 (794)
+....+++.+.||+|++++++++.++.|+++|++...+++.|.||+++|+|.+|+++|.++ .|...+.
T Consensus 32 ~~y~~~~~~v~~~~L~l~l~~~~~~v~g~~~i~~~~~~~~~l~Ld~~~L~I~sV~v~G~~l~~y~~~~~----------- 100 (891)
T 3b34_A 32 HDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVRHGASDAPLRLNGEDLKLVSVHINDEPWTAWKEEEG----------- 100 (891)
T ss_dssp GGCCCCSEEEEEEEEEEECCSSCEEEEEEEEEEECSCTTCCEEEECSSCEEEEEEETTEECCSEEEETT-----------
T ss_pred hhCCCCCceeEEEEEEEEEECCceEEEEEEEEEEccCCCCEEEEECCCCEEEEEEEcCEEcceEEeeCC-----------
Confidence 4466789999999999999999999999999987654567899999999999999999887 5554321
Q ss_pred cccCCCCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhHHhhhcccCCCCCCccCCCceEEEEEEEEeccCcce
Q 003808 91 RSMVSSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQNVKLVRIDYWVEKVEVGI 170 (794)
Q Consensus 91 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~l~I~~~~p~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~y~~~~~~~G~ 170 (794)
.|+|. + ++ +.++++ +.|.+.+... ....|+
T Consensus 101 ----------------------------~L~I~---~---lp---~~~~l~--I~y~~~p~~~-----------~~l~Gl 130 (891)
T 3b34_A 101 ----------------------------ALVIS---N---LP---ERFTLK--IINEISPAAN-----------TALEGL 130 (891)
T ss_dssp ----------------------------EEEEC---S---CC---SEEEEE--EEEEECGGGC-----------CSCCEE
T ss_pred ----------------------------EEEEE---e---CC---CeEEEE--EEEEEeeccc-----------CCCceE
Confidence 35553 0 11 012222 2333322110 011244
Q ss_pred EEEeceEecccccCCcceEEeeCCCCCCeeEEEEEEEEeCC-e-EEEEcCcccceeeccCCCCceEEEEecCCCCcceee
Q 003808 171 HFDGNALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQN-L-IAVSAGSLLYQVLSKDDPPRKTYVYRLDVPVSAKWI 248 (794)
Q Consensus 171 ~f~~~~~~T~~e~~~Ar~wfPC~D~p~~katf~l~i~~p~~-~-~avsng~l~~~~~~~~~~~~~~~~f~~t~p~s~y~i 248 (794)
++.+.+++|||||++||+||||+|+|+.||+|+|+|++|++ | +++|||+++++.. .++++++++|..++|||+|++
T Consensus 131 y~s~~~~~Tq~Ep~~AR~~fPc~DeP~~kAtf~itI~~p~~~y~~alSNg~l~~~~~--~~~g~~~~~f~~t~pmstYL~ 208 (891)
T 3b34_A 131 YQSGDALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGNRVAQGE--LENGRHWVQWQDPFPKPCYLF 208 (891)
T ss_dssp EEETTEEEEECTTTTGGGTSSBCCSTTCCEEEEEEEEEETTTCCEEEESSEEEEEEE--CSTTEEEEEEEEEEEECGGGC
T ss_pred EEeCCEEEeccccCCCCccccCCCCcccceEEEEEEEeccccceEEEeCCcccccee--ecCCeEEEEEEeCCCccceee
Confidence 44455789999999999999999999999999999999997 6 9999999987653 246789999999999999999
Q ss_pred EEEEeeceEeecC----C--CCcEEEEEcCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEECCCCcccccccc
Q 003808 249 TLAVAPFEVLPDH----H--QSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFLAPEMAVSSSTFG 322 (794)
Q Consensus 249 afavg~f~~~~~~----~--~~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~vp~~~~~~~~~~g 322 (794)
||+||+|+.++.. . +.++++|++|+..+.++++++.+.++++|||++||++|||++|++|++|++..++||||
T Consensus 209 A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~al~~~~~~l~~~e~~fG~pYP~~k~diVavPdf~~GaMEn~- 287 (891)
T 3b34_A 209 ALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENK- 287 (891)
T ss_dssp CEEEECCEEEEEEEECTTCCEEEEEEEECTTCGGGCHHHHHHHHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCT-
T ss_pred EEEeccceEEeeeeeccCCCceEEEEEeccCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCcCccccC-
Confidence 9999999998752 2 25799999999999999999999999999999999999999999999998888999999
Q ss_pred cchhhh-ccccccCcccch-hhh-HHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHhcCchhHHHHHH
Q 003808 323 AAMGIF-SSQILYDEKVID-QAI-DTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEARYRRY 399 (794)
Q Consensus 323 agl~~~-~~~lL~~~~~~~-~~~-~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EGfA~y~~~~~~~~~~G~~~~~~~~~ 399 (794)
||++| +..+|+++.... ... ....+||||+|||||||+|||+||+|+|||||||+|++.+++++..|....++...
T Consensus 288 -GLitf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHqWFGNlVT~~~W~dlWLnEGFAtY~e~~~~~~~~~~~~~~~~~~ 366 (891)
T 3b34_A 288 -GLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNV 366 (891)
T ss_dssp -TEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred -ceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhCCCCcccchhhceehHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 78888 456888775432 222 23468999999999999999999999999999999999999988877554333221
Q ss_pred HhhcceeeeccCCCcccCCCCccccCCC---CcccccccceeeehHHHHHHHHHHhhchHHHHHHHHHHHHhhcCCCCCC
Q 003808 400 KANCAVCKADDSGATALSSSASCKDLYG---TQCIGIFGKIRSCKSVAILQMLEKQMGSNFFRKILQNIISRAQGASPVR 476 (794)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~~~L~~yl~~~~~~~~~~ 476 (794)
..........+.+ +..+++.+ .++...|+.++|.||++|||||+..||++.|+++|+.|++++++++
T Consensus 367 ~~l~~~~~~~D~~-------~~~~Pi~~~~~~~i~~~f~~i~Y~KGa~VLrML~~~lG~e~F~~gLr~Yl~~~~~~~--- 436 (891)
T 3b34_A 367 RTMRGLQFAEDAS-------PMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSA--- 436 (891)
T ss_dssp HHHHHTHHHHHTS-------TTCCCSSCSEESCGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEE---
T ss_pred HHHHHhhhhhhcc-------ccCCCCccccccccccccccchhhHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCCC---
Confidence 1111000011111 11222321 3455678999999999999999999999999999999999999985
Q ss_pred CCCHHHHHHHHHHhcCCCcccHHhHHHhhhcCCCccEEEEEEEEeccCcEEEEEEEeecCCCCCCCCccccCCCCCCCCC
Q 003808 477 TLSTKEFRHFANKVGNLERPFLKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRD 556 (794)
Q Consensus 477 ~~st~~f~~~~e~~~~~~~~dl~~f~~~Wv~~~G~P~l~v~~~~~~~~~~v~l~~~q~~~~~~~~~~~~~~~~~~~~~~~ 556 (794)
+++++|++.+++++| .||++| ++|++++|+|+++|+..|+.+++.++++++|..... +. ..
T Consensus 437 -att~Df~~ale~~sg---~dL~~f-~~W~~q~G~P~l~V~~~~~~~~~~~~ltl~Q~~~~~-----------~~---~~ 497 (891)
T 3b34_A 437 -ATCDDFVQAMEDASN---VDLSHF-RRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTPAT-----------PD---QA 497 (891)
T ss_dssp -ECHHHHHHHHHHHHC---CCCTTT-THHHHCCSCCEEEEEEEEETTTTEEEEEEEEECCCB-----------TT---BS
T ss_pred -CCHHHHHHHHHHHhC---CCHHHH-HHHHcCCCCceEEEEEEeecCCCEEEEEEEEecCCC-----------CC---CC
Confidence 799999999999874 578884 799999999999999999877777777777753210 00 11
Q ss_pred CCCCCcceeEEEEEecCCcccccccccCCCc-ceEEEeeecccchhhhhcCCCCCCCCCCCCCCCCcccccccccc-CCC
Q 003808 557 GDIGWPGMMSIRVHELDGMYDHPILPMAGDA-WQLLEIQCHSKLAARRALKPKKGSKPDGCDDNGDAVAGLDMRSS-MES 634 (794)
Q Consensus 557 ~~~~~~~pltiri~e~dg~~~~~~~~~~~~~-~~~~~i~~~~k~~~~r~~k~~~~~~~~~~~~~~d~~~~~~~~~~-~~~ 634 (794)
....|++|+++.+.+.+|.. +.+. +.+.. ..++.+. + .+. .+... .+
T Consensus 498 ~~~~~~iPi~v~l~~~~G~~-~~~~-~~~~~~~~~~~l~--~------------------~~~--------~~~~~~v~- 546 (891)
T 3b34_A 498 EKQPLHIPFAIELYDNEGKV-IPLQ-KGGHPVNSVLNVT--Q------------------AEQ--------TFVFDNVY- 546 (891)
T ss_dssp CCCCCCEEEEEEEECTTSCB-CCCE-ETTEECCSEEEEC--S------------------SEE--------EEEECCCC-
T ss_pred CCceEEEEEEEEEEcCCCCc-cccc-ccccccceEEEec--C------------------CcE--------EEEEccCC-
Confidence 23479999999999888862 1110 01100 0011110 0 000 00000 11
Q ss_pred CeeEEEecCCCceEEEEcccCcHHHHHHHHhhcCChHHHHHHHHHHHcC-------------C-CCchhHHHHHHHHhcc
Q 003808 635 PLSWIRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVAQAQAIAALEAL-------------P-HLSFNVVNTLNNFLSD 700 (794)
Q Consensus 635 ~~~wir~D~~~~~l~~v~~~~~~~m~~~qL~~d~dv~aq~eai~~l~~~-------------~-~~~~~~~~~L~~~l~~ 700 (794)
.--||++|+++.++++|++++++++|+.||++|+|+++|.||++.|.+. + ..+...+.++..+|.|
T Consensus 547 ~~P~~~l~~~~s~~~~v~~~~~~~~l~~~l~~d~d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 626 (891)
T 3b34_A 547 FQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLD 626 (891)
T ss_dssp SCCEEEESTTCCSSCEEECCCCHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHC
T ss_pred CCCcEEEcCCCcceEEEeCCCCHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHhhhcCCCcCccHHHHHHHHHHhcC
Confidence 1238999999999999999999999999999999999999999888753 1 1234567788888877
Q ss_pred C
Q 003808 701 S 701 (794)
Q Consensus 701 ~ 701 (794)
+
T Consensus 627 ~ 627 (891)
T 3b34_A 627 E 627 (891)
T ss_dssp S
T ss_pred C
Confidence 5
No 6
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=100.00 E-value=4.1e-78 Score=721.00 Aligned_cols=545 Identities=15% Similarity=0.199 Sum_probs=421.3
Q ss_pred eEEEEEEEEEEEeccCcEEEEEEEEEEEcCCcceEEEeccCceeeEEEEcCeeeeeeeCCCCcccchhhhhccccCCCCC
Q 003808 19 AVVRHQKLCLSIDMEKHQIYGYTELEIAVPDIGIVGLHAENLGIESVLVDGEPTEFEYYPHNHQNVENEKRWRSMVSSPS 98 (794)
Q Consensus 19 ~~~~hy~l~L~id~~~~~~~G~v~I~i~~~~~~~I~L~~~~l~I~~v~v~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (794)
+.|.||+|+|++|+++.+|.|.|+| . .+++.|.||+++|+|.+|+++|.+++|.+++.
T Consensus 1 v~p~hY~l~l~~~~~~~~f~G~v~I--~-~~~~~i~L~~~~l~I~~v~~~g~~~~~~~~~~------------------- 58 (780)
T 1z5h_A 1 MEVEKYDLTLDFDIQKRTFNGTETI--T-ADAGDIVLDAVGLQINWMKVNGRDTAFTYDGQ------------------- 58 (780)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEEE--E-ECSSCEEEECSSCEEEEEEETTEECCCEECSS-------------------
T ss_pred CEEEEEEEEEEEECCCCEEEEEEEE--E-cCCCEEEEEccCCEEEEEEEeceeccEEEECC-------------------
Confidence 4699999999999999999999999 4 56789999999999999999998887765521
Q ss_pred cHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhHHhhhcccCCCCCCccCCC-ceEEEEEEEEeccCcceEEEeceE
Q 003808 99 SAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQN-VKLVRIDYWVEKVEVGIHFDGNAL 177 (794)
Q Consensus 99 ~~~~~~~~~~~~~l~~~~~~~l~I~~~~p~~~~~~~~~~~~l~~~~~~~g~~~~~-~~~~~~~y~~~~~~~G~~f~~~~~ 177 (794)
.|+|.++ + | .+++ .+.|+|.++.. .|++++.|. ++++
T Consensus 59 --------------------~l~i~~~-~------g--~~~l--~i~y~g~~~~~~~G~y~~~y~-----------~~~~ 96 (780)
T 1z5h_A 59 --------------------TVRAPGD-S------Q--PQKI--EISFAGKVSDSLSGIYYAGRE-----------NGMI 96 (780)
T ss_dssp --------------------EEEECCC-S------S--SEEE--EEEEEEECBSSSSEEEEESST-----------TCEE
T ss_pred --------------------EEEEEeC-C------c--cEEE--EEEEEEEeCCCcccceecccc-----------ceEE
Confidence 2555432 1 1 1333 35677776553 467665442 4678
Q ss_pred ecccccCCcceEEeeCCCCCCeeEEEEEEEEeCCeEEEEcCcccceeeccCCCCceEEEEecCCCCcceeeEEEEeeceE
Q 003808 178 HTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQNLIAVSAGSLLYQVLSKDDPPRKTYVYRLDVPVSAKWITLAVAPFEV 257 (794)
Q Consensus 178 ~T~~e~~~Ar~wfPC~D~p~~katf~l~i~~p~~~~avsng~l~~~~~~~~~~~~~~~~f~~t~p~s~y~iafavg~f~~ 257 (794)
+|||||.+||+||||+|+|+.||+|+|+|++|++|+|+|||+++++. ++++++++|..++|||+|++||+||+|+.
T Consensus 97 ~Tq~ep~~AR~~fPc~DeP~~Katf~iti~~p~~~~~lSN~~~~~~~----~~g~~~~~f~~t~~mstYL~a~~vg~f~~ 172 (780)
T 1z5h_A 97 TTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISNMPPKRIE----VSERKVVEFQDTPRMSTYLLYVGIGKFRY 172 (780)
T ss_dssp EEECTTTCGGGTSCBCCCTTSCBEEEEEEEECTTCEEEESSCEEEEE----ESSSEEEEECCCCSBCGGGCCEEEECCEE
T ss_pred EEccccCChhheeecCCCcccccEEEEEEEECCCCEEEeCCcccccc----CCCceEEEEecCCcccceEEEEEEeccEE
Confidence 99999999999999999999999999999999999999999987641 35788999999999999999999999999
Q ss_pred eecCC-CCcEEEEEcCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEECCCCcccccccccchhhh-ccccccC
Q 003808 258 LPDHH-QSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFLAPEMAVSSSTFGAAMGIF-SSQILYD 335 (794)
Q Consensus 258 ~~~~~-~~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~vp~~~~~~~~~~gagl~~~-~~~lL~~ 335 (794)
++... +.++++|++|+ +.++++++.+.++++||+++||+||||+||++|++|++..++|||| ||++| ++.+|++
T Consensus 173 ~~~~~~gv~~~v~~~~~--~~~~~al~~~~~~l~~~e~~fg~~YP~~k~d~v~vpdf~~GaMEn~--glit~~e~~ll~~ 248 (780)
T 1z5h_A 173 EYEKYRDIDLILASLKD--IRSKYPLDMARKSVEFYENYFGIPYALPKMHLISVPEFGAGAMENW--GAITFREIYMDIA 248 (780)
T ss_dssp EEEEETTEEEEEEESSC--CCCSHHHHHHHHHHHHHHHHHSSCCSSSEEEEEEETTCTTCEECCT--TEEEEEHHHHSCC
T ss_pred EeeccCCeeEEEEEccc--hhHHHHHHHHHHHHHHHHHHhCCCCCCccCCEEEcCCCCCCccccc--CeeEeecceEeec
Confidence 87543 57899999999 6778999999999999999999999999999999998878899999 68888 4568887
Q ss_pred cccchhh-hHHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHhcCchhH--HHHHHHhhcceeeeccC-
Q 003808 336 EKVIDQA-IDTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEA--RYRRYKANCAVCKADDS- 411 (794)
Q Consensus 336 ~~~~~~~-~~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EGfA~y~~~~~~~~~~G~~~~--~~~~~~~~~~~~~~~~~- 411 (794)
+...... .....+||||+|||||||+|||+||+|+|||||||+|++++++++.+|...+ .|... ........|..
T Consensus 249 ~~~~~~~~~~~~~viaHElaHqWfGnlVT~~~W~dlWLnEGfA~y~~~~~~~~~~~~~~~~~~f~~~-~~~~al~~D~~~ 327 (780)
T 1z5h_A 249 ENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFATFMSYKTMDTLFPEWSFWGDFFVS-RTSGALRSDSLK 327 (780)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHCTTTCHHHHHHHH-THHHHHHHTTST
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCcccccccHHHHHHHHHHHHHHhCCchhHHHHHHHH-HHHHHHHHhhcc
Confidence 3322222 2234589999999999999999999999999999999999999999988653 11110 11111111111
Q ss_pred CCcccCCCCccccC-CCCcccccccceeeehHHHHHHHHHHhhchHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHh
Q 003808 412 GATALSSSASCKDL-YGTQCIGIFGKIRSCKSVAILQMLEKQMGSNFFRKILQNIISRAQGASPVRTLSTKEFRHFANKV 490 (794)
Q Consensus 412 ~~~~l~~~~~~~~~-~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~~~L~~yl~~~~~~~~~~~~st~~f~~~~e~~ 490 (794)
...|+ ..++ .+.++..+|+.++|.||++|||||+..||++.|+++|+.|++++++++ +++++|++.++++
T Consensus 328 ~~~pi-----~~~v~~~~~~~~~fd~i~Y~KGa~vl~mL~~~lG~e~F~~~l~~yl~~~~~~~----~t~~Dl~~~l~~~ 398 (780)
T 1z5h_A 328 NTHPI-----EVDVRDPDEISQIFDEISYGKGASILRMIEDYAGYEEFRKGISKYLNDHKFGN----AEGSDLWTAIEDV 398 (780)
T ss_dssp TCCCS-----CCCCCSSCCTTTTSCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTEE----ECHHHHHHHHHHH
T ss_pred CCCCc-----eecCCCHHHHHHhcchhhhhhHHHHHHHHHHHhCHHHHHHHHHHHHHHhccCC----CCHHHHHHHHHHH
Confidence 11111 1122 234456689999999999999999999999999999999999999986 6899999999998
Q ss_pred cCCCcccHHhHHHhhhcCCCccEEEEEEEEeccCcEEEEEEEeecCCCCCCCCccccCCCCCCCCCCCCCCcceeEEEEE
Q 003808 491 GNLERPFLKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDGDIGWPGMMSIRVH 570 (794)
Q Consensus 491 ~~~~~~dl~~f~~~Wv~~~G~P~l~v~~~~~~~~~~v~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pltiri~ 570 (794)
++ .|+++||++|++++|+|+++|++ + ++.+.|+|+|+.... +....|++|+++ .
T Consensus 399 sg---~dl~~~~~~W~~~~G~P~l~v~~--~--~~~~~l~Q~~f~~~~-----------------~~~~~w~iPi~~-~- 452 (780)
T 1z5h_A 399 SG---KPVKRVMEYWIKNPGYPVIKLKR--N--GRKITMYQTRFLLNG-----------------EEEGRWPVPVNI-K- 452 (780)
T ss_dssp HC---SCHHHHHHHHHHSCSCEEEEEEE--S--SSEEEEEEEECCSSC-----------------CEECCCCEEEEE-E-
T ss_pred hC---CCHHHHHHHHHhCCCCceEEEEe--c--CcEEEEEEEEecCCC-----------------CCCceEEEEEEE-c-
Confidence 74 68999999999999999999987 2 456888888864310 112479999998 3
Q ss_pred ecCCcccccccccCCCcceEEEeeecccchhhhhcCCCCCCCCCCCCCCCCccccccccccCCCCeeEEEecCCCceEEE
Q 003808 571 ELDGMYDHPILPMAGDAWQLLEIQCHSKLAARRALKPKKGSKPDGCDDNGDAVAGLDMRSSMESPLSWIRADPEMEYLAE 650 (794)
Q Consensus 571 e~dg~~~~~~~~~~~~~~~~~~i~~~~k~~~~r~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~wir~D~~~~~l~~ 650 (794)
.+|. .+. . +. .+ . .. + +.. +||.+|++..++||
T Consensus 453 -~~~~-~~~-----------~-l~--~~----~----------------~~-~---------~~~-~~i~~N~~~~gyyr 485 (780)
T 1z5h_A 453 -KKDG-VER-----------I-LL--ED----E----------------AS-I---------EAD-GLIKINADSAGFYR 485 (780)
T ss_dssp -ETTE-EEE-----------E-EE--CS----S----------------EE-E---------ECT-TEEEESGGGCSSSE
T ss_pred -CCCc-eee-----------e-cc--Cc----e----------------EE-c---------cCC-ceEEEeCCCCEEEE
Confidence 2332 110 1 10 00 0 00 1 112 69999999999999
Q ss_pred EcccCcHHHHHHHHh--hcCChHHH---HHHHHHHHcCCCCchhHHHHHHHHhccCcchhHHHHHHHHHHHhhccc
Q 003808 651 IHFNQPVQMWINQLE--KDGDVVAQ---AQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASE 721 (794)
Q Consensus 651 v~~~~~~~m~~~qL~--~d~dv~aq---~eai~~l~~~~~~~~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~ 721 (794)
| ++++.+|...++ ..-++..| ++++.+|++....+......|.+.|.+|+ .|.|+..|...|..+..-
T Consensus 486 v--~Yd~~~~~~l~~~l~~i~~~~Ra~li~D~~~l~~~g~~~~~~~l~l~~~l~~E~-~~~~w~~~~~~l~~~~~~ 558 (780)
T 1z5h_A 486 V--LYDDATFSDVMGHYRDLSPLDRIGLVDDLFAFLLSGHIDPETYRQRIRNFFDDE-DHNVITAIVGQMEYLRML 558 (780)
T ss_dssp E--ECCHHHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGTTCC-CHHHHHHHHHHHHHHHTT
T ss_pred E--ECCHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHhc
Confidence 9 557778844322 23477665 57788888777677666667888999886 689999999998877543
No 7
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=100.00 E-value=9.8e-75 Score=694.57 Aligned_cols=578 Identities=14% Similarity=0.131 Sum_probs=422.0
Q ss_pred CCCCeEEEEEEEEEEEeccCcEEEEEEEEEEEcCCcceEEEeccCceeeEEEEcCeeeeeeeCCCCcccchhhhhccccC
Q 003808 15 ENSGAVVRHQKLCLSIDMEKHQIYGYTELEIAVPDIGIVGLHAENLGIESVLVDGEPTEFEYYPHNHQNVENEKRWRSMV 94 (794)
Q Consensus 15 ~~~~~~~~hy~l~L~id~~~~~~~G~v~I~i~~~~~~~I~L~~~~l~I~~v~v~g~~~~~~~~~~~~~~~~~~~~~~~l~ 94 (794)
..+++.+.||+|++++++++..++|+++|+... +++.|.||+++ +|++|++||+++.|...+.
T Consensus 12 ~~~~~~v~~~~L~l~l~~~~~~v~g~~~i~~~~-~~~~i~Ld~~~-~I~sv~v~g~~~~~~~~~~--------------- 74 (867)
T 2gtq_A 12 QTPAYHILKTDLHFDINEPQTVVKSRLTVEPQR-VGEPLVLDGSA-KLLSVKINGAAADYVLEGE--------------- 74 (867)
T ss_dssp CCCSEEEEEEEEEEEECSSCEEEEEEEEEEESS-TTSCEEEECCS-EEEEEEETTEECCCEEETT---------------
T ss_pred CCCCCceeEEEEEEEEECCcEEEEEEEEEEEeC-CCCEEEEecCC-CEEEEEECCeecceEeeCC---------------
Confidence 346889999999999999999999988887542 36789999999 9999999998876664421
Q ss_pred CCCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhHHhhhcccCCCCCCccCCCceEEEEEEEEeccCcceEEEe
Q 003808 95 SSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQNVKLVRIDYWVEKVEVGIHFDG 174 (794)
Q Consensus 95 ~~~~~~~~~~~~~~~~~l~~~~~~~l~I~~~~p~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~y~~~~~~~G~~f~~ 174 (794)
.|+|. + ++.+ .+++. +.|++.+... .+..|+++.+
T Consensus 75 ------------------------~L~I~---~---lp~g--~~~l~--I~y~~~p~~~-----------~~~~Gly~s~ 109 (867)
T 2gtq_A 75 ------------------------TLTIA---G---VPSE--RFTVE--VETEILPAEN-----------KSLMGLYASG 109 (867)
T ss_dssp ------------------------EEEES---C---CCSS--CEEEE--EEEEECGGGC-----------CSCSEEEEET
T ss_pred ------------------------EEEEE---e---cCCC--cEEEE--EEEEEeccCC-----------CCCcEEEEEC
Confidence 25553 0 1101 12222 2222221110 0112444445
Q ss_pred ceEecccccCCcceEEeeCCCCCCeeEEEEEEEEeCC-e-EEEEcCcccceeeccCCCCceEEEEecCCCCcceeeEEEE
Q 003808 175 NALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQN-L-IAVSAGSLLYQVLSKDDPPRKTYVYRLDVPVSAKWITLAV 252 (794)
Q Consensus 175 ~~~~T~~e~~~Ar~wfPC~D~p~~katf~l~i~~p~~-~-~avsng~l~~~~~~~~~~~~~~~~f~~t~p~s~y~iafav 252 (794)
.+++|||||.+||+||||+|+|+.||+|+++|++|++ | +++|||+++++.. .++++++++|+.++|||+|++||+|
T Consensus 110 ~~~~Tq~ep~~AR~~fPc~DeP~~katf~itIt~p~~~y~~~lSNg~l~~~~~--~~~g~~~~~f~~t~pmstYL~A~~v 187 (867)
T 2gtq_A 110 GNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDGGE--FSDGRHWVKWEDPFSKPSYLFALVA 187 (867)
T ss_dssp TEEEEECTTTTGGGTSCBCCSTTCCBEEEEEEEEETTTCCEEEESSEEEEEEE--CTTSEEEEEEECCSCBCGGGCCEEE
T ss_pred CEEEEeeccCCCceeeccCCCCCcceEEEEEEEEccccceEEEeCCcccccee--ecCCeEEEEEEeCCCccccceeEEE
Confidence 5789999999999999999999999999999999997 6 9999999987653 2467889999999999999999999
Q ss_pred eeceEeecC----C--CCcEEEEEcCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEECCCCcccccccccchh
Q 003808 253 APFEVLPDH----H--QSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFLAPEMAVSSSTFGAAMG 326 (794)
Q Consensus 253 g~f~~~~~~----~--~~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~vp~~~~~~~~~~gagl~ 326 (794)
|+|+.++.. . +.++++|++|+..+.++++++.+.++++|||++||++|||++|++|++|++..++|||| ||+
T Consensus 188 G~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~al~~~~~~l~~~e~~fG~pYP~~k~d~Vavpdf~~GaMEn~--gli 265 (867)
T 2gtq_A 188 GDLAVTEDYFTTMSGRNVKIEFYTTEADKPKVGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENK--GLN 265 (867)
T ss_dssp ECCEEEEEEEECTTSCEEEEEEEECTTTGGGCHHHHHHHHHHHHHHHHHHCCCCCSSEEEEEEESSCSSSEECCT--TEE
T ss_pred ecceEeeeceeccCCCceEEEEEeccccHHHHHHHHHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCccccccC--Cce
Confidence 999998752 1 25799999999999999999999999999999999999999999999998878999999 788
Q ss_pred hh-ccccccCcccch-hhh-HHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhhc
Q 003808 327 IF-SSQILYDEKVID-QAI-DTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEARYRRYKANC 403 (794)
Q Consensus 327 ~~-~~~lL~~~~~~~-~~~-~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EGfA~y~~~~~~~~~~G~~~~~~~~~~~~~ 403 (794)
+| ++.+|++++... ... ....+||||+|||||||+|||+||+|+|||||||+|++.++.++..|....++.......
T Consensus 266 tf~e~~ll~~~~~~~~~~~~~i~~vIaHElAHqWfGnlVT~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~~~~~l~ 345 (867)
T 2gtq_A 266 IFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIENIRLLR 345 (867)
T ss_dssp EEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTBEESSGGGHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred eecccccccCcccCcHHHHHHHHHHHHHHHHHHhcCcEEEecccccccchHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 88 556888875432 222 234589999999999999999999999999999999999999888775433322111110
Q ss_pred ceeeeccCCCcccCCCCccccCC---CCcccccccceeeehHHHHHHHHHHhhchHHHHHHHHHHHHhhcCCCCCCCCCH
Q 003808 404 AVCKADDSGATALSSSASCKDLY---GTQCIGIFGKIRSCKSVAILQMLEKQMGSNFFRKILQNIISRAQGASPVRTLST 480 (794)
Q Consensus 404 ~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~~~L~~yl~~~~~~~~~~~~st 480 (794)
......+.+ +..+++. ..++...|+.++|.||++|||||+..||++.|+++|+.|+++|++++ +++
T Consensus 346 ~~~~~~D~~-------~~~~Pi~~~~~~~i~~~f~~i~Y~KGa~vl~mL~~~lG~e~F~~glr~Yl~~~~~~~----~t~ 414 (867)
T 2gtq_A 346 QHQFPEDAG-------PTAHPVRPASYEEMNNFYTMTVYEKGAEVVRMYHTLLGEEGFQKGMKLYFQRHDGQA----VTC 414 (867)
T ss_dssp HHHHHHHHS-------TTCCCSSCSEESCGGGGCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE----ECH
T ss_pred HHhhhhccC-------ccCCCCcCCChhhhhhhccchhhhHHHHHHHHHHHHHCHHHHHHHHHHHHHHhCCCC----CCH
Confidence 000011111 1112221 13455678899999999999999999999999999999999999985 799
Q ss_pred HHHHHHHHHhcCCCcccHHhHHHhhhcCCCccEEEEEEEEeccCcEEEEEEEeecCCCCCCCCccccCCCCCCCCCCCCC
Q 003808 481 KEFRHFANKVGNLERPFLKEFFPRWVGTCGCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDGDIG 560 (794)
Q Consensus 481 ~~f~~~~e~~~~~~~~dl~~f~~~Wv~~~G~P~l~v~~~~~~~~~~v~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (794)
++|++.+++++| .|+.+| ++|++++|+|+++|+..+++ +.++++++|..... +. ......
T Consensus 415 ~Df~~~l~~~sg---~dl~~f-~~W~~q~G~P~l~v~~~~~~--~~~~l~l~Q~~~~~-----------~~---~~~~~~ 474 (867)
T 2gtq_A 415 DDFRAAMADANG---INLDQF-ALWYSQAGTPVLEAEGRLKN--NIFELTVKQTVPPT-----------PD---MTDKQP 474 (867)
T ss_dssp HHHHHHHHHHHT---CCCGGG-GHHHHCCSCCEEEEEEEEET--TEEEEEEEEECCCB-----------TT---BSCCCC
T ss_pred HHHHHHHHHHhC---CCHHHH-HHHhcCCCCceEEEEEEecC--CEEEEEEEEecCCC-----------CC---CCCCce
Confidence 999999999874 688886 79999999999999998854 34455555543210 00 012347
Q ss_pred CcceeEEEEEecCCcccccccccCCCc--ceEEEeeecccchhhhhcCCCCCCCCCCCCCCCCccccccccccCCCCeeE
Q 003808 561 WPGMMSIRVHELDGMYDHPILPMAGDA--WQLLEIQCHSKLAARRALKPKKGSKPDGCDDNGDAVAGLDMRSSMESPLSW 638 (794)
Q Consensus 561 ~~~pltiri~e~dg~~~~~~~~~~~~~--~~~~~i~~~~k~~~~r~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~w 638 (794)
|++|+++.+...+|.. +... +.+.. ...+.+. .+ +. .+....-..--|
T Consensus 475 ~~iPi~~~~~~~~g~~-~~~~-~~~~~~~~~~~~l~--~~------------------~~--------~~~~~~~~~~p~ 524 (867)
T 2gtq_A 475 MMIPVKVGLLNRNGEA-VAFD-YQGKRATEAVLLLT--EA------------------EQ--------TFLLEGVTEAVV 524 (867)
T ss_dssp CCEEEEEEEECTTCCB-CCEE-CSSCEESCEEEEEC--SS------------------EE--------EEEEBCCCSCCE
T ss_pred EEEEEEEEEEcCCCcc-cccc-cccccccceEEEEc--CC------------------ce--------EEEEeCCCCCCc
Confidence 9999999998877762 1110 11110 0011110 00 00 000000011237
Q ss_pred EEecCCCceEEEEcccCcHHHHHHHHhhcCChHHHHHHHHHHHcC-------------C-CCchhHHHHHHHHhccCcch
Q 003808 639 IRADPEMEYLAEIHFNQPVQMWINQLEKDGDVVAQAQAIAALEAL-------------P-HLSFNVVNTLNNFLSDSKAF 704 (794)
Q Consensus 639 ir~D~~~~~l~~v~~~~~~~m~~~qL~~d~dv~aq~eai~~l~~~-------------~-~~~~~~~~~L~~~l~~~~~f 704 (794)
+.+++++....+|++++++.+|..+|.+|.|.++|.+|++.|.+. . .....+..++..++.|+.--
T Consensus 525 ~~l~r~fs~~~~l~~~~~~~~l~~l~~~~~d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 604 (867)
T 2gtq_A 525 PSLLRGFSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTLYRRAVAANLATLSDGVELPKHEKLLAAVEKVISDDLLD 604 (867)
T ss_dssp EEESTTCCSSCEEECCCCHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSSC
T ss_pred eEecCCCCccEEEECCCCHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHhcCcCCC
Confidence 999999999999999999999999999999999999996555432 1 11334667777777676545
Q ss_pred hHHHHHHHH--HHHhhc
Q 003808 705 WRVRIEAAY--ALANTA 719 (794)
Q Consensus 705 ~~vR~~Aa~--aL~~~~ 719 (794)
+.|+.++.. .++.++
T Consensus 605 ~~~~a~~l~lp~~~~l~ 621 (867)
T 2gtq_A 605 NAFKALLLGVPSEAELW 621 (867)
T ss_dssp HHHHHHHTCCCCHHHHT
T ss_pred HHHHHHHhcCCCHHHHH
Confidence 777777766 344444
No 8
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=100.00 E-value=8.6e-73 Score=658.77 Aligned_cols=452 Identities=17% Similarity=0.254 Sum_probs=348.3
Q ss_pred CCeEEEEEEEEEEEeccCcEEEEEEEEEEEcC-C-cceEEEeccCceeeEEEEcCeeeeeeeCCCCcccchhhhhccccC
Q 003808 17 SGAVVRHQKLCLSIDMEKHQIYGYTELEIAVP-D-IGIVGLHAENLGIESVLVDGEPTEFEYYPHNHQNVENEKRWRSMV 94 (794)
Q Consensus 17 ~~~~~~hy~l~L~id~~~~~~~G~v~I~i~~~-~-~~~I~L~~~~l~I~~v~v~g~~~~~~~~~~~~~~~~~~~~~~~l~ 94 (794)
.-+++.||+|+|++|+++++|+|+|+|++.+. + ++.|.||+++|+|++|+|||++++|........
T Consensus 12 ~~~rv~Hy~L~l~vD~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~L~I~~V~v~g~~~~~~~~~~~~~------------ 79 (608)
T 3u9w_A 12 SVCRTKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEVKYALGERQSY------------ 79 (608)
T ss_dssp TTEEEEEEEEEEEEETTTTEEEEEEEEEEEECSTTEEEEEEEESSCEEEEEEETTEECCEEECCCCGG------------
T ss_pred cCCCceEEEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEECCEEcceeccccccc------------
Confidence 34689999999999999999999999999863 3 589999999999999999999988876532100
Q ss_pred CCCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhHHhhhcccCCCCCCccCCCceEEEEEEEEeccCcceEEEe
Q 003808 95 SSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQNVKLVRIDYWVEKVEVGIHFDG 174 (794)
Q Consensus 95 ~~~~~~~~~~~~~~~~~l~~~~~~~l~I~~~~p~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~y~~~~~~~G~~f~~ 174 (794)
....|.|.++.+ ++.+. .+.+.+.|+|.+... |+....+ ....|- ..
T Consensus 80 ---------------------~~~~l~I~l~~~---l~~g~---~~~l~I~y~~~~~~~-~~~~~~~---~~~~g~--~~ 126 (608)
T 3u9w_A 80 ---------------------KGSPMEISLPIA---LSKNQ---EIVIEISFETSPKSS-ALQWLTP---EQTSGK--EH 126 (608)
T ss_dssp ---------------------GCEEEEEEEEEE---ECTTC---EEEEEEEEECCTTCT-TEEEECG---GGSSSS--SS
T ss_pred ---------------------cCceEEEEcCCC---CCCCC---EEEEEEEEEEEcCCC-ceeeecc---cccCCC--cc
Confidence 011366655421 11111 122235555555432 2221111 111121 24
Q ss_pred ceEecccccCCcceEEeeCCCCCCeeEEEEEEEEeCCeEEEEcCcccceeeccCCCCceEEEEecCCCCcceeeEEEEee
Q 003808 175 NALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQNLIAVSAGSLLYQVLSKDDPPRKTYVYRLDVPVSAKWITLAVAP 254 (794)
Q Consensus 175 ~~~~T~~e~~~Ar~wfPC~D~p~~katf~l~i~~p~~~~avsng~l~~~~~~~~~~~~~~~~f~~t~p~s~y~iafavg~ 254 (794)
++++|||||.+||+||||+|+|+.||||+++|++|++++|+|||.+.++...++++++++++|..++|||+|++||+||+
T Consensus 127 ~~~~Tq~ep~~AR~~fPc~D~P~~Katf~i~I~~p~~~~alsng~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~ 206 (608)
T 3u9w_A 127 PYLFSQCQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVGA 206 (608)
T ss_dssp CEEEECCTTTTGGGTSCBCCSTTCCEEEEEEEEEETTSEEEESSEEEEEEECTTCTTEEEEEEEEEEEECGGGCCEEEES
T ss_pred eEEEEcccCCCCCEEEEecCccceeEEEEEEeeCCcceeeeeeccccceeeccCCCCeEEEEEEecCCcccEEEEEEEee
Confidence 68999999999999999999999999999999999999999999998776666677899999999999999999999999
Q ss_pred ceEeecCCCCcEEEEEcCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEE-CCCCcccccccccchhhhccccc
Q 003808 255 FEVLPDHHQSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFL-APEMAVSSSTFGAAMGIFSSQIL 333 (794)
Q Consensus 255 f~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~v-p~~~~~~~~~~gagl~~~~~~lL 333 (794)
|+..+. +..+.+|+.|+..+.++++++.+.++|++||+++| +|||+++++|++ |++..++|||+ ||+++++.+|
T Consensus 207 f~~~~~--~~~~~v~~~p~~~~~~~~~~~~~~~~l~~~e~~~g-~Yp~~~~~~vv~~p~f~~GgMEn~--gl~~~~~~~l 281 (608)
T 3u9w_A 207 LESRQI--GPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENP--CLTFVTPTLL 281 (608)
T ss_dssp CEEEEE--ETTEEEEECHHHHHHHHHHTTTHHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCT--TEEEECGGGC
T ss_pred eeeEec--CCceEEEeChhhHHHHHHHHHHHHHHHHhHHhcCC-CCCchhhceeeecccccchhhhcC--cceeeeeeee
Confidence 998764 56788999999999999999999999999999998 999999999988 55667899998 6888877766
Q ss_pred cCcccchhhhHHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHhcCchhHHHHHHHhhcceeee-c-cC
Q 003808 334 YDEKVIDQAIDTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEARYRRYKANCAVCKA-D-DS 411 (794)
Q Consensus 334 ~~~~~~~~~~~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EGfA~y~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~-~~ 411 (794)
..+... ..+||||||||||||+||++||+|+|||||||+|++++++++++|.+.........+...... + ..
T Consensus 282 ~~~~~~------~~viaHElAHqWfGnlVT~~~W~d~WLnEGfAty~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (608)
T 3u9w_A 282 AGDKSL------SNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFG 355 (608)
T ss_dssp CSSSTT------THHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccchh------HHHHHHHhhhhhhcCcCccccccchhHHHhHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHhhhh
Confidence 554422 347999999999999999999999999999999999999999999876533221111111000 0 01
Q ss_pred CCcccCCCCccccCCCCcccccccceeeehHHHHHHHHHHhhc-hHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHh
Q 003808 412 GATALSSSASCKDLYGTQCIGIFGKIRSCKSVAILQMLEKQMG-SNFFRKILQNIISRAQGASPVRTLSTKEFRHFANKV 490 (794)
Q Consensus 412 ~~~~l~~~~~~~~~~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG-~~~F~~~L~~yl~~~~~~~~~~~~st~~f~~~~e~~ 490 (794)
...++... ..+....+....|+.++|.||++|||||++.|| ++.|+++|+.|++++++++ +++++|.++++++
T Consensus 356 ~~~p~~~~--~~~~~~~~~~~~f~~i~Y~KGa~vL~mL~~~lG~~~~F~~~lr~Yl~~~~~~~----~tt~Df~~~l~~~ 429 (608)
T 3u9w_A 356 ETHPFTKL--VVDLTDIDPDVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKS----ITTDDWKDFLYSY 429 (608)
T ss_dssp TTCGGGSS--SCCCTTCCHHHHCSSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEE----ECHHHHHHHHHHH
T ss_pred ccCCcccc--ccccccCChhhcccHHHHhHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCC----CCHHHHHHHHHHH
Confidence 11121110 111112223457999999999999999999998 6789999999999999986 7999999999988
Q ss_pred cCCCcccHHhH----HHhhhcCCCccEEEEEEEEeccCcEEEEEEEe
Q 003808 491 GNLERPFLKEF----FPRWVGTCGCPVLRMGFSYNKRKNIVELAVLR 533 (794)
Q Consensus 491 ~~~~~~dl~~f----~~~Wv~~~G~P~l~v~~~~~~~~~~v~l~~~q 533 (794)
++ .+++.+ |++|++++|+|+++|+++++..+..++|+|++
T Consensus 430 ~~---~~~~~~~~~~~~~W~~~~G~P~v~v~~d~~~~~~~~~l~q~~ 473 (608)
T 3u9w_A 430 FK---DKVDVLNQVDWNAWLYSPGLPPIKPNYDMTLTNACIALSQRW 473 (608)
T ss_dssp TG---GGHHHHHTSCHHHHHHCCSSCSSCCCCCCTTTHHHHHHHHHH
T ss_pred hc---cccchhhHHHHHHHhcCCCCCceeeeeccccccceeeHHhHH
Confidence 73 567776 99999999999999988776656666666554
No 9
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=100.00 E-value=1.3e-66 Score=606.45 Aligned_cols=426 Identities=18% Similarity=0.271 Sum_probs=327.3
Q ss_pred CCCeEEEEEEEEEEEeccCcEEEEEEEEEEEcC-C-cceEEEeccCceeeEEEE-c--C--eeeeeeeCCCCcccchhhh
Q 003808 16 NSGAVVRHQKLCLSIDMEKHQIYGYTELEIAVP-D-IGIVGLHAENLGIESVLV-D--G--EPTEFEYYPHNHQNVENEK 88 (794)
Q Consensus 16 ~~~~~~~hy~l~L~id~~~~~~~G~v~I~i~~~-~-~~~I~L~~~~l~I~~v~v-~--g--~~~~~~~~~~~~~~~~~~~ 88 (794)
..++.|.||+|+|++|+++.+|.|+|+|++.+. + ++.|.||+++|+|.+|+| + | +++.|++.+....
T Consensus 23 p~~~~~~hy~l~l~~d~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~l~I~~v~v~~~~g~~~~~~~~~~~~~~~------ 96 (605)
T 3cia_A 23 YDQVKATHVYLDLNVDFDKKSLSGFAELSLDWFTDNKAPLILDTRDLVIHRVMAKNSQGQWVKVNYDLAKRDDV------ 96 (605)
T ss_dssp TTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECCSSCCCEEEBCSSEEEEEEEEECTTCCEEEECEEEEEECSS------
T ss_pred CCCceEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEcCCCCccceeEEecCcccc------
Confidence 368999999999999999999999999999863 3 689999999999999999 8 8 7777765421000
Q ss_pred hccccCCCCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhHHhhhcccCCCCCCccCCCceEEEEEEEEec-cC
Q 003808 89 RWRSMVSSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQNVKLVRIDYWVEK-VE 167 (794)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~l~I~~~~p~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~y~~~~-~~ 167 (794)
....|.|.++. +.+++ .+.|+|.+.. .|+ +++.. ..
T Consensus 97 ---------------------------~~~~l~i~l~~---------~~~~l--~i~y~~~~~~-~gl----~~~~~~~~ 133 (605)
T 3cia_A 97 ---------------------------LGSKLTINTPL---------NAKKV--RVYYNSTEKA-TGL----QWLSAEQT 133 (605)
T ss_dssp ---------------------------SCEEEEECCCT---------TCSEE--EEEEEECTTC-TTE----EEECGGGS
T ss_pred ---------------------------CCCeEEEEeCC---------ceEEE--EEEEEEecCC-Cce----EEeccccc
Confidence 01136664320 11223 3566666543 222 22221 01
Q ss_pred cceEEEeceEecccccCCcceEEeeCCCCCCeeEEEEEEEEeCCeEEEEcCcccceeeccCCCCceEEEEecCCCCccee
Q 003808 168 VGIHFDGNALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQNLIAVSAGSLLYQVLSKDDPPRKTYVYRLDVPVSAKW 247 (794)
Q Consensus 168 ~G~~f~~~~~~T~~e~~~Ar~wfPC~D~p~~katf~l~i~~p~~~~avsng~l~~~~~~~~~~~~~~~~f~~t~p~s~y~ 247 (794)
+|- ..++++|||||.+||+||||+|+|+.||+|+++|++|++|+|+|||....+. ..++ +++|..++|||+|+
T Consensus 134 ~g~--~~~~~~Tq~ep~~AR~~fPc~D~P~~katf~i~i~~p~~~~alsng~~~~~~---~~~~--~~~f~~t~pmstYl 206 (605)
T 3cia_A 134 AGK--EKPFLFSQNQAIHARSWIPIQDTPSVRVTYTARITTDKDLLAVMSANNEPGT---ERDG--DYFFSMPQAIPPYL 206 (605)
T ss_dssp SSS--SSCEEEECCTTTTGGGTSCBCCCTTCCEEEEEEEECCTTCEEEESSEEC-------CCS--EEEEEEEEEECGGG
T ss_pred CCC--cccEEEecCcccChhhceecCCCcCceeEEEEEEEEcCCcEEEecCCcccee---cCCC--eEEEeeCCCcccee
Confidence 221 2468899999999999999999999999999999999999999999654321 1222 78999999999999
Q ss_pred eEEEEeeceEeecCCCCcEEEEEcCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEC-CCCcccccccccchh
Q 003808 248 ITLAVAPFEVLPDHHQSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFLA-PEMAVSSSTFGAAMG 326 (794)
Q Consensus 248 iafavg~f~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~vp-~~~~~~~~~~gagl~ 326 (794)
+||+||+|+.++. +..+++|++|+..+.++++++.+.+++++||++|| +|||++|++|++| ++..++||++ |++
T Consensus 207 ~a~~vg~f~~~~~--g~~~~v~~~p~~~~~~~~~~~~~~~~l~~~e~~fG-~YP~~k~d~v~~p~~f~~GgMEn~--glt 281 (605)
T 3cia_A 207 IAIGVGDLEFKAM--SHQTGIYAESYILDAAVAEFDDTQAMIDKAEQMYG-KYRWGRYDLLMLPPSFPFGGMENP--RLS 281 (605)
T ss_dssp CCEEEESCEEEES--SSSEEEEECSTTHHHHHHHSTTHHHHHHHHHHHHC-CCTTSCEEEEECCTTCSSSEECCT--TEE
T ss_pred EEEEEeeeeEecC--CCeEEEEeccChHHHHHHHHHHHHHHHHHHHHHhC-CCCCccccEEEECCccCCCcccCC--cEE
Confidence 9999999999875 45799999999999999999999999999999999 9999999999996 6667889999 465
Q ss_pred hhccccccCcccchhhhHHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHhcCchhHHHHHH---Hhhc
Q 003808 327 IFSSQILYDEKVIDQAIDTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEARYRRY---KANC 403 (794)
Q Consensus 327 ~~~~~lL~~~~~~~~~~~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EGfA~y~~~~~~~~~~G~~~~~~~~~---~~~~ 403 (794)
+.+..+|.++.. ...+||||+|||||||+|||+||+|+|||||||+|++++++++.+|....++... +...
T Consensus 282 f~~~~ll~~~~~------~~~viaHElaHqWfGnlVT~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~ 355 (605)
T 3cia_A 282 FITPTVVAGDKS------LVNLIAHELAHSWSGNLVTNESWRDLWLNEGFTSYVENRIMEAVFGTDRAVMEQALGAQDLN 355 (605)
T ss_dssp EECGGGCCSSSC------STHHHHHHHHHTTBTTTEEESSTTSTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EecchhccCcHH------HHHHHHHHHHHHhhccccccCcchHhHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHH
Confidence 446677765432 2358999999999999999999999999999999999999999999875444321 1111
Q ss_pred ceeeecc-CCCcccCCCCccccCCCCcccccccceeeehHHHHHHHHHHhhchHHHHHHHHHHHHhhcCCCCCCCCCHHH
Q 003808 404 AVCKADD-SGATALSSSASCKDLYGTQCIGIFGKIRSCKSVAILQMLEKQMGSNFFRKILQNIISRAQGASPVRTLSTKE 482 (794)
Q Consensus 404 ~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~~~L~~yl~~~~~~~~~~~~st~~ 482 (794)
..+. .. ....++. .++.+.++...|+.++|.||++|||||+..||++.|+++|+.|++++++++ +++++
T Consensus 356 ~~l~-~~~~~~~pl~-----~~~~~~~~~~~f~~i~Y~KGa~vl~mL~~~lG~e~F~~~lr~yl~~~~~~~----~t~~d 425 (605)
T 3cia_A 356 AEIL-ELDASDTQLY-----IDLKGRDPDDAFSGVPYVKGQLFLMYLEEKFGRERFDAFVLEYFDSHAFQS----LGTDN 425 (605)
T ss_dssp HHHH-HSCTTTTSSS-----CCCTTCCTTTSCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTEE----ECHHH
T ss_pred HHHH-hhccCCCCcc-----cCCCCCChhHhhCccchhHHHHHHHHHHHHhChHHHHHHHHHHHHHhCcCC----CCHHH
Confidence 1000 00 1111111 122223455689999999999999999999999999999999999999985 79999
Q ss_pred HHHHHHHhcCCC-cccHHh-HHHhhhcCCCccEEEEEE
Q 003808 483 FRHFANKVGNLE-RPFLKE-FFPRWVGTCGCPVLRMGF 518 (794)
Q Consensus 483 f~~~~e~~~~~~-~~dl~~-f~~~Wv~~~G~P~l~v~~ 518 (794)
|++.++++++.. ..+++. +|++|++++|+|++++++
T Consensus 426 f~~~l~~~~~~~~~~~l~~~~~~~W~~~~G~P~~~~~~ 463 (605)
T 3cia_A 426 FVKYLKANLTDKYPNIVSDNEINEWIFKAGLPSYAPQP 463 (605)
T ss_dssp HHHHHHHTTTTTSTTSSCHHHHHHHHHSSSCCSSSCCC
T ss_pred HHHHHHHHhccccccccchhhHHHHhcCCCCCceeccC
Confidence 999999887520 124555 799999999999998754
No 10
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=100.00 E-value=6.9e-67 Score=610.39 Aligned_cols=435 Identities=18% Similarity=0.263 Sum_probs=330.4
Q ss_pred cCCC-CCC-CCeEEEEEEEEEEEeccCcEEEEEEEEEEEc-CC----cceEEEeccCceeeEEEEcCeeeeeeeCCCCcc
Q 003808 10 EETK-VEN-SGAVVRHQKLCLSIDMEKHQIYGYTELEIAV-PD----IGIVGLHAENLGIESVLVDGEPTEFEYYPHNHQ 82 (794)
Q Consensus 10 ~~~~-~~~-~~~~~~hy~l~L~id~~~~~~~G~v~I~i~~-~~----~~~I~L~~~~l~I~~v~v~g~~~~~~~~~~~~~ 82 (794)
.+|. .++ ..+.|.||+|+|++|+++.+|.|.|+|++.+ .+ ++.|.||+++|+|.+|+|+|.++.|.+.+....
T Consensus 17 ~d~~~~~~p~~~~~~hY~L~l~~d~~~~~~~G~v~I~~~~~~~~~~~~~~i~Ld~~~l~I~~v~v~g~~~~~~~~~~~~~ 96 (632)
T 2xq0_A 17 YDQSTLSNYKDFAVLHTDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHIDGSKADFQIEQRKEP 96 (632)
T ss_dssp CCTTCCSCGGGEEEEEEEEEEEEETTTTEEEEEEEEEEEECC---CCCCEEEEBCSSEEEEEEEETTEECCEEECCCBTT
T ss_pred CCcccccCCCceeEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCcCcEEEEEccCCEEEEEEECCeecceEEcccccc
Confidence 3443 333 6799999999999999999999999999986 34 789999999999999999999888876532000
Q ss_pred cchhhhhccccCCCCCcHHHHHHHHHHHhhcccCCCCeeEeccCCCCCchhhHHhhhcccCCCCCCccCCCceEEEEEEE
Q 003808 83 NVENEKRWRSMVSSPSSAADAAAAVYISALERELVPNLLINCCKPFKGLTDQIEQMNLENKLDSSAEPKQNVKLVRIDYW 162 (794)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~l~I~~~~p~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~y~ 162 (794)
....|.|.++.+ + +.+++ .+.|+|.+.. .|+ ++
T Consensus 97 ---------------------------------~~~~l~I~l~~~------g-~~~~l--~I~Y~g~~~~-~gl----~~ 129 (632)
T 2xq0_A 97 ---------------------------------LGSRLVINNASC------N-DNFTL--NIQFRTTDKC-TAL----QW 129 (632)
T ss_dssp ---------------------------------TBCCEEEECCCS------S-SEEEE--EEEEEECTTC-SSE----EE
T ss_pred ---------------------------------cCcEEEEEecCC------C-CEEEE--EEEEeeecCc-Ccc----ee
Confidence 012477765432 1 11223 3556665543 122 12
Q ss_pred Eec-cCcceEEEeceEecccccCCcceEEeeCCCCCCeeEEEEEEEEeCCeEEEEcCcccceeeccCCCCceEEEEecCC
Q 003808 163 VEK-VEVGIHFDGNALHTDNQIRRARCWFPCIDDTTQRCCYDLEFTVSQNLIAVSAGSLLYQVLSKDDPPRKTYVYRLDV 241 (794)
Q Consensus 163 ~~~-~~~G~~f~~~~~~T~~e~~~Ar~wfPC~D~p~~katf~l~i~~p~~~~avsng~l~~~~~~~~~~~~~~~~f~~t~ 241 (794)
+.. ..+|- .++++|||||.+||+||||+|+|+.||||+|+|++| ++|++||.++.+... +..+++|+.++
T Consensus 130 ~~~~~~~g~---~~~~~Tq~ep~~AR~~fPc~D~P~~Katf~i~I~~p--~~vv~sg~~~~~~~~----~~~~~~F~~t~ 200 (632)
T 2xq0_A 130 LNSKQTKGG---KPYVFSQLEAIHARSLFPCFDTPSVKSTFTASIESP--LPVVFSGIRIEDTSK----DTNIYRFEQKV 200 (632)
T ss_dssp ECTTTSTTS---SCEEEECCTTTTGGGTSCBCCSTTCCEEEEEEEECS--SCEEESSEECCCC--------CEEEEEEEE
T ss_pred ecccccCCC---ceEEEeccccCCcceeeeecCCcccceEEEEEEEEc--hHHhccCccccceec----CCCeEEEEeCC
Confidence 211 01221 467899999999999999999999999999999999 999999876544321 22379999999
Q ss_pred CCcceeeEEEEeeceEeecCCCCcEEEEEcCCchhHHHHHHH-HHHHHHHHHHHhcCCCCCCCCccEEEEC-CCCccccc
Q 003808 242 PVSAKWITLAVAPFEVLPDHHQSLMSHICLPANVSKIHNTVE-FFHNAFSHYETYLDAKFPFGSYKQVFLA-PEMAVSSS 319 (794)
Q Consensus 242 p~s~y~iafavg~f~~~~~~~~~~v~~~~~p~~~~~~~~~~~-~~~~~l~~~e~~~g~~YP~~k~~~V~vp-~~~~~~~~ 319 (794)
|||+|++||+||+|+..+. +..+++|++|+..+.+++++. .+.+++++||++|| +|||++|++|++| ++..++||
T Consensus 201 pmstYLva~~vg~f~~~~~--g~~~~v~~~p~~~~~~~~~~~~~~~~~l~~~e~~fG-pYP~~k~d~v~~pp~f~~GgME 277 (632)
T 2xq0_A 201 PIPAYLIGIASGDLSSAPI--GPRSTVYTEPFRLKDCQWEFENDVEKFIQTAEKIIF-EYEWGTYDILVNVDSYPYGGME 277 (632)
T ss_dssp EECGGGCCEEESSCEEEEE--ETTEEEEECHHHHHHHHHHHTTTHHHHHHHHHHHSC-CCCSSCCCEEECCTTCCSSEEC
T ss_pred ccchhheeeeEecceeecc--CCeeEEEEccchHHHHHHHHHHHHHHHHHHHHHhcc-cCCcccccEEEECCCCCCCccc
Confidence 9999999999999999875 457999999999888899998 99999999999999 9999999999995 66678899
Q ss_pred ccccchhhhccccccCcccchhhhHHHHHHHHHHHHHhhccccCCCCCCchHHHHHHHHHHHHHHHHHhcCchhHHHHHH
Q 003808 320 TFGAAMGIFSSQILYDEKVIDQAIDTSIKLSFALARQWFGVYITPELPNDEWLLDGLAGFLTDSFIKKFLGNNEARYRRY 399 (794)
Q Consensus 320 ~~gagl~~~~~~lL~~~~~~~~~~~~~~~iaHElAHQWfG~~Vt~~~w~d~WL~EGfA~y~~~~~~~~~~G~~~~~~~~~ 399 (794)
++ ||++.++.+|.++.. ...+||||+|||||||+||++||+|+|||||||+|++++++++.+|++.+++...
T Consensus 278 n~--glt~~~~~ll~~~~~------~~~viaHElAHqWfGnlVT~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~ 349 (632)
T 2xq0_A 278 SP--NMTFATPTLLAHDRS------NIDVIAHELAHSWSGNLVTNCSWNHFWLNEGWTVYLERRIIGAIHGEPTRHFSAL 349 (632)
T ss_dssp CT--TCEEECGGGCCSSSC------STHHHHHHHHHTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred cc--eEEEeeceeccCchh------HHHHHHHHHHHHHhcCCCccCCcchhhHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 99 565557777765432 2358999999999999999999999999999999999999999999876544321
Q ss_pred Hhhccee--eeccCCCcccCCCCccccCC-CCcccccccceeeehHHHHHHHHHHhhch-HHHHHHHHHHHHhhcCCCCC
Q 003808 400 KANCAVC--KADDSGATALSSSASCKDLY-GTQCIGIFGKIRSCKSVAILQMLEKQMGS-NFFRKILQNIISRAQGASPV 475 (794)
Q Consensus 400 ~~~~~~~--~~~~~~~~~l~~~~~~~~~~-~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~-~~F~~~L~~yl~~~~~~~~~ 475 (794)
..+.... ........++.. ...++. ..++...|+.++|.||++|||||+..||+ +.|+++|+.|++++++++
T Consensus 350 ~~~~~l~~~l~~~~~~~pl~~--l~~~~~~~~~~~~~f~~i~Y~KGa~vL~mL~~~lG~~e~F~~~Lr~Yl~~~~~~~-- 425 (632)
T 2xq0_A 350 IGWSDLQNSIDSMKDPERFST--LVQNLNDNTDPDDAFSTVPYEKGFNLLFHLETILGGKAEFDPFIRHYFKKFAKKS-- 425 (632)
T ss_dssp HHHHHHHHHHHTCSSHHHHTS--SSCCCCSSSCGGGGCSSHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHTTTEE--
T ss_pred HHHHHHHHHHHhcccCCCCcc--cccCCCCCCChHHhccchhhHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhCcCC--
Confidence 1111000 000000111110 001121 23455689999999999999999999999 999999999999999985
Q ss_pred CCCCHHHHHHHHHHhcCCCcccHHh-HHHhhhcCCCccEEEEEE
Q 003808 476 RTLSTKEFRHFANKVGNLERPFLKE-FFPRWVGTCGCPVLRMGF 518 (794)
Q Consensus 476 ~~~st~~f~~~~e~~~~~~~~dl~~-f~~~Wv~~~G~P~l~v~~ 518 (794)
+++++|++.++++.+..+.+++. +|++|++++|+|+ .+++
T Consensus 426 --~tt~Df~~~l~~~~~~~~~~l~~~~~~~W~~~~G~P~-~~~~ 466 (632)
T 2xq0_A 426 --LDTFQFLDTLYEFYPEKKEILDSVDWETWLYKPGMPP-RPHF 466 (632)
T ss_dssp --ECHHHHHHHHHHHCGGGHHHHHTSCHHHHHHCCSCCC-CCCC
T ss_pred --CCHHHHHHHHHHHhhhccccccHHHHHHHhcCCCCCC-CcCC
Confidence 79999999999886421246777 7999999999999 6543
No 11
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=99.90 E-value=1e-23 Score=242.68 Aligned_cols=312 Identities=8% Similarity=0.031 Sum_probs=192.1
Q ss_pred ceEEeeCCCCCCeeEEEEEEEEeCC---eEEEEcCcccceeeccCCCCceEEEEecCC---CCcceeeEEEEeeceEeec
Q 003808 187 RCWFPCIDDTTQRCCYDLEFTVSQN---LIAVSAGSLLYQVLSKDDPPRKTYVYRLDV---PVSAKWITLAVAPFEVLPD 260 (794)
Q Consensus 187 r~wfPC~D~p~~katf~l~i~~p~~---~~avsng~l~~~~~~~~~~~~~~~~f~~t~---p~s~y~iafavg~f~~~~~ 260 (794)
...|.+++.- ...+.+++|+.|++ |.+.+..+..+. ...+..+ |.... -+- --+.+|+|+..+.
T Consensus 109 ~~~fly~~g~-~~~p~~~~i~~P~~~~~W~vaT~L~~~~~----~~~~~~~--f~a~~yd~LvD---sPv~~G~~~~~~~ 178 (597)
T 4fgm_A 109 TSLCLAVEGQ-TDLPCELHLHAPPEAPLWKVATGMPRKSG----QPHSWGC--FRADNYDALID---YPFLIGDLTIEEF 178 (597)
T ss_dssp HHHCCEETTC-TTSCEEEEECCCTTCTTCEEEESSCBCSS----CTTSSEE--EEESSHHHHTT---CCEEEESCEEEEE
T ss_pred hhhheeccCc-cCCcEEEEEECCCCCCcceEEecCCccCC----CCCcceE--EEcCCHHHHhc---chhcccCcEEEEe
Confidence 3455566553 56788999999999 998777764321 1112333 43321 011 1135788887665
Q ss_pred CC-CCcEEEEEcCCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEC-CCCcccccccccchhhhcccccc-Ccc
Q 003808 261 HH-QSLMSHICLPANVSKIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVFLA-PEMAVSSSTFGAAMGIFSSQILY-DEK 337 (794)
Q Consensus 261 ~~-~~~v~~~~~p~~~~~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~vp-~~~~~~~~~~gagl~~~~~~lL~-~~~ 337 (794)
.. +.++++...+......+..+..+.+++++++++|| +|||++|++++.+ ++..++||+.++.+++++...|. ...
T Consensus 179 ~~~g~p~~l~v~~~~~~d~~~~~~~~~~~~~~~~~~fG-~yP~~~Y~fl~~~~~~~~GgmEh~~st~l~~~~~~l~~~~~ 257 (597)
T 4fgm_A 179 IAHGIKHSLVLSGRHYADTSRITADLAKICETQISLFE-EAPFQSYTFLTMVVGNGFGGLEHRNSTALLCSRKDLISAHQ 257 (597)
T ss_dssp EETTEEEEEEEESSCCCCHHHHHHHHHHHHHHHHHHHT-SCSCSEEEEEEEEESSCCEEEECSSEEEEEEEGGGSCCTTC
T ss_pred ccCCeEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhC-CCCCCceEEEEEccCCCCcccccCCceEEEeCchhcccccc
Confidence 43 44555544333333457888899999999999999 9999999998642 23456788765444445433221 111
Q ss_pred -cchhh-hHHHHHHHHHHHHHhhccccCC-----------CCCCchHHHHHHHHHHHHHHHHHhcCc--hhHHHHHHHhh
Q 003808 338 -VIDQA-IDTSIKLSFALARQWFGVYITP-----------ELPNDEWLLDGLAGFLTDSFIKKFLGN--NEARYRRYKAN 402 (794)
Q Consensus 338 -~~~~~-~~~~~~iaHElAHQWfG~~Vt~-----------~~w~d~WL~EGfA~y~~~~~~~~~~G~--~~~~~~~~~~~ 402 (794)
..+.. .....+++||++|||||+.|+| ++|+++||+||||+|++.+++.+.-.. .++........
T Consensus 258 ~~~~~~~~~~~~liaHE~~H~W~g~~i~p~~~~~~d~~~~~~~~~lWl~EG~t~Y~~~l~~~r~G~~~~~~~~~~l~~~i 337 (597)
T 4fgm_A 258 YEMNDNYQTFLSLCCHEYFHSWNIKTLKPKAFLPYQLEKESYTEQLWFYEGMTSYFDDYLLHTSGIIDEKRYLKLLGDTL 337 (597)
T ss_dssp CSCCHHHHHHHHHHHHHHHHTTBTTTBCBGGGSSCCCSSCCCCSTHHHHTHHHHHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred ccchhhhhchhhhHhhhhheeecccccccccccccccccccccccchhhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 01112 2234589999999999988765 456899999999999999998764222 23211111111
Q ss_pred cceeeeccCCCcccCC-CC-ccccCC-CCcccccccceeeehHHHHHHHHHHhhch-----HHHHHHHHHHHHhhcCCCC
Q 003808 403 CAVCKADDSGATALSS-SA-SCKDLY-GTQCIGIFGKIRSCKSVAILQMLEKQMGS-----NFFRKILQNIISRAQGASP 474 (794)
Q Consensus 403 ~~~~~~~~~~~~~l~~-~~-~~~~~~-~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~-----~~F~~~L~~yl~~~~~~~~ 474 (794)
..+.........++.. +. .....+ +.+-........|.||++|++||+..|++ +.|+++|+.|++++....
T Consensus 338 ~~~~~~~gr~~~sl~~ss~~aw~~~yr~~~n~~n~~~s~Y~KGalv~~~LD~~lR~~s~g~~sldd~mr~l~~~~~~~~- 416 (597)
T 4fgm_A 338 SRVERGAGQYQQSVTESSFLAWTKFYQQNENAPNSIVSYYAKGALIALSLDLMLRLQSDHKLTLARVMKELWHEFGKTS- 416 (597)
T ss_dssp HHHHHSGGGGTCCHHHHHHTCCCCCTTCCTTHHHHCCCTTHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHTTTT-
T ss_pred HHhhcCCCccccChHHcCchhhhccccCCcccCCcccccchHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHhCcCC-
Confidence 1111000000011100 00 000001 00000011123589999999999888855 589999999999986421
Q ss_pred CCCCCHHHHHHHHHHhcCCCcccHHhHHHhhhcCCCccEE
Q 003808 475 VRTLSTKEFRHFANKVGNLERPFLKEFFPRWVGTCGCPVL 514 (794)
Q Consensus 475 ~~~~st~~f~~~~e~~~~~~~~dl~~f~~~Wv~~~G~P~l 514 (794)
..+++++|.+++++++| .++.+||++|+++++.|.+
T Consensus 417 -~~~t~~d~~~~~e~~sG---~dl~~ff~~~l~~t~~~p~ 452 (597)
T 4fgm_A 417 -IGTADDTVINWLNQYPG---IDISDFLKDALYNKESLSL 452 (597)
T ss_dssp -CCBCTTHHHHHHHTSTT---CCCHHHHHHHHHSCSCCCC
T ss_pred -CCCCHHHHHHHHHHhcC---cCHHHHHHHHHhCCCCcch
Confidence 14789999999999874 6899999999999998643
No 12
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens}
Probab=98.70 E-value=2.1e-07 Score=103.29 Aligned_cols=208 Identities=11% Similarity=0.098 Sum_probs=126.2
Q ss_pred CccEEEEEEEEeccCcEEEEEEEeecCCCCCCCCccccCCCCCCCCCCCCCCcceeEEEEEecCCcccccccccCCCcce
Q 003808 510 GCPVLRMGFSYNKRKNIVELAVLRDCTVKPDSRTPVLSSNTDSENRDGDIGWPGMMSIRVHELDGMYDHPILPMAGDAWQ 589 (794)
Q Consensus 510 G~P~l~v~~~~~~~~~~v~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pltiri~e~dg~~~~~~~~~~~~~~~ 589 (794)
|||+|+|+.+ ++.+.|+|+||..... .+ .+.+..|++|+++..... ++....+ +.+. -.
T Consensus 1 GyPvvtV~~~----~~~~~l~Q~RFl~~~~----------~~---~~~~~~W~IPl~~~~~~~-~~~~~~~--l~~~-~~ 59 (419)
T 3rjo_A 1 GFPLITITVR----GRNVHMKQEHYMKGSD----------GA---PDTGYLWHVPLTFITSKS-DMVHRFL--LKTK-TD 59 (419)
T ss_dssp CEEEEEEEEE----TTEEEEEEEEEC-----------------------CCCCEEEEEEESSC-SSCEEEE--ECSS-EE
T ss_pred CCCEEEEEEC----CCEEEEEEeeccCCCC----------CC---CCCCeEEEEEEEEEeCCC-CccceEE--EecC-ce
Confidence 9999999872 4688999999864211 00 012358999999976432 2111111 1000 00
Q ss_pred EEEeeecccchhhhhcCCCCCCCCCCCCCCCCccccccccccCCCCeeEEEecCCCceEEEEcccCcHHHH---HHHHhh
Q 003808 590 LLEIQCHSKLAARRALKPKKGSKPDGCDDNGDAVAGLDMRSSMESPLSWIRADPEMEYLAEIHFNQPVQMW---INQLEK 666 (794)
Q Consensus 590 ~~~i~~~~k~~~~r~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~wir~D~~~~~l~~v~~~~~~~m~---~~qL~~ 666 (794)
. + ...++.+||++|+++.++||| +|++.+| +.||+.
T Consensus 60 --~------------------------------i-------~l~~~~~wi~~N~~~~GyYRV--nYd~~~w~~L~~~L~~ 98 (419)
T 3rjo_A 60 --V------------------------------L-------ILPEEVEWIKFNVGMNGYYIV--HYEDDGWDSLTGLLKG 98 (419)
T ss_dssp --E------------------------------E-------ECSSCCSCEEEEESSSSCCEE--ECHHHHHHHHHHHHHH
T ss_pred --E------------------------------E-------EcCCCCceEEEeCCccceEEE--EeCHHHHHHHHHHHhh
Confidence 0 0 011234799999999999999 6677777 567766
Q ss_pred cCChH-----HH-HHHHHHHHcCCCCchhHHHHHHHHhccCcchhHHHHHHHHHHHhhccccc------cccchH-----
Q 003808 667 DGDVV-----AQ-AQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEET------DWAGLL----- 729 (794)
Q Consensus 667 d~dv~-----aq-~eai~~l~~~~~~~~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~------~~~g~~----- 729 (794)
++..+ +| ++.+.+|++....+.....-|.+.|.+|+. |-|..+|...|..+..--. .+..+.
T Consensus 99 ~~~~i~~~dRa~LidD~~~La~ag~~~~~~~l~l~~yL~~E~~-y~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 177 (419)
T 3rjo_A 99 THTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETE-IMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIR 177 (419)
T ss_dssp HGGGSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGGGCCS-HHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred CCccCCHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcccch-HHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHH
Confidence 54443 23 366677887776777766678999999876 7889999988887653211 111111
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhccccCCCCChHHHHHHHHHhhh
Q 003808 730 HLVKFYKSRRFDENIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLK 791 (794)
Q Consensus 730 ~l~~~f~~~~~~~~~~i~~~n~f~~~~~y~~~~~i~~a~~~~r~~~~~~p~~~~~fl~~~l~ 791 (794)
.+...|.+.-+. ++ .+...=.++..+...+|.+ .+..|-.++.+.+-+.+.
T Consensus 178 l~~~~~~~lgw~-------~~--~~~~~~~lR~~~l~~ac~~--g~~~c~~~A~~~f~~~~~ 228 (419)
T 3rjo_A 178 LLRDLIDKQTWT-------DE--GSVSERMLRSQLLLLACVH--NYQPCVQRAEGYFRKWKE 228 (419)
T ss_dssp HHHHHHHHCCSS-------CC--SCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-------CC--chHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHhh
Confidence 122223332222 12 3566667788888888887 455688888877766553
No 13
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=91.36 E-value=0.13 Score=46.10 Aligned_cols=56 Identities=20% Similarity=0.116 Sum_probs=39.1
Q ss_pred HHHHhhcCChHHHHHHHHHHHcCCCCchhHHHHHHHHhccCcchhHHHHHHHHHHHhhcc
Q 003808 661 INQLEKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTAS 720 (794)
Q Consensus 661 ~~qL~~d~dv~aq~eai~~l~~~~~~~~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~ 720 (794)
+.++..|+|...|..|+.+|+.... ..+...|.+.|.|+ -+.||.+|+.+|+++..
T Consensus 47 L~~~L~d~~~~vR~~A~~aL~~~~~--~~a~~~L~~~L~d~--~~~VR~~A~~aL~~~~~ 102 (131)
T 1te4_A 47 LLESLSNEDWRIRGAAAWIIGNFQD--ERAVEPLIKLLEDD--SGFVRSGAARSLEQIGG 102 (131)
T ss_dssp HHHGGGCSCHHHHHHHHHHHGGGCS--HHHHHHHHHHHHHC--CTHHHHHHHHHHHHHCS
T ss_pred HHHHHcCCCHHHHHHHHHHHHhcCC--HHHHHHHHHHHcCC--CHHHHHHHHHHHHHhCc
Confidence 3344457788888888888887643 34566777777765 36788888888887764
No 14
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=90.48 E-value=1.6 Score=42.19 Aligned_cols=97 Identities=27% Similarity=0.303 Sum_probs=59.5
Q ss_pred HhhcCChHHHHHHHHHHHcCCCCchhHHHHHHHHhccCcchhHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCCCC
Q 003808 664 LEKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFYKSRRFDEN 743 (794)
Q Consensus 664 L~~d~dv~aq~eai~~l~~~~~~~~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~~~~g~~~l~~~f~~~~~~~~ 743 (794)
+..|.|..-|..|+.+|.+.... .+...|.+.|.|+ -+.||..|+.+|+++..++ .+..|.+..+ +
T Consensus 89 ~l~~~~~~vr~~a~~aL~~~~~~--~~~~~L~~~l~d~--~~~vr~~a~~aL~~~~~~~----~~~~L~~~l~----d-- 154 (211)
T 3ltm_A 89 ALKDEDGWVRQSAAVALGQIGDE--RAVEPLIKALKDE--DWFVRIAAAFALGEIGDER----AVEPLIKALK----D-- 154 (211)
T ss_dssp HTTCSSHHHHHHHHHHHHHHCCG--GGHHHHHHHTTCS--SHHHHHHHHHHHHHHCCGG----GHHHHHHHTT----C--
T ss_pred HHcCCCHHHHHHHHHHHHHhCcH--HHHHHHHHHHhCC--CHHHHHHHHHHHHHcCCHH----HHHHHHHHHc----C--
Confidence 34567777777777777766432 3446677777664 3677777777777775431 2334443332 1
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHhccccCCCCChHHHHHHHHHhhhc
Q 003808 744 IGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKV 792 (794)
Q Consensus 744 ~~i~~~n~f~~~~~y~~~~~i~~a~~~~r~~~~~~p~~~~~fl~~~l~~ 792 (794)
+ +..|+.+...||+.+. .+++...|..+|+-
T Consensus 155 -----~-------~~~vr~~a~~aL~~~~------~~~~~~~L~~~l~d 185 (211)
T 3ltm_A 155 -----E-------DGWVRQSAADALGEIG------GERVRAAMEKLAET 185 (211)
T ss_dssp -----S-------SHHHHHHHHHHHHHHC------SHHHHHHHHHHHHH
T ss_pred -----C-------CHHHHHHHHHHHHHhC------chhHHHHHHHHHhC
Confidence 1 2357777788888884 26677777777654
No 15
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=88.85 E-value=1.5 Score=42.28 Aligned_cols=49 Identities=29% Similarity=0.173 Sum_probs=24.7
Q ss_pred cCChHHHHHHHHHHHcCCCCchhHHHHHHHHhccCcchhHHHHHHHHHHHhhc
Q 003808 667 DGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTA 719 (794)
Q Consensus 667 d~dv~aq~eai~~l~~~~~~~~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~ 719 (794)
|+|..-|..|+..|..... ......|.+.|.|+ -..||..|+.+|+++.
T Consensus 30 ~~~~~vR~~A~~~L~~~~~--~~~~~~L~~~l~~~--~~~vr~~a~~aL~~~~ 78 (211)
T 3ltm_A 30 DDSYYVRRAAAYALGKIGD--ERAVEPLIKALKDE--DAWVRRAAADALGQIG 78 (211)
T ss_dssp CSSHHHHHHHHHHHHHHCC--GGGHHHHHHHTTCS--CHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhCC--ccHHHHHHHHHcCC--CHHHHHHHHHHHHhhC
Confidence 5555555555555555432 12334455555543 2455555555555554
No 16
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=88.21 E-value=2.4 Score=40.44 Aligned_cols=96 Identities=26% Similarity=0.298 Sum_probs=58.9
Q ss_pred hhcCChHHHHHHHHHHHcCCCCchhHHHHHHHHhccCcchhHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCCCCC
Q 003808 665 EKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFYKSRRFDENI 744 (794)
Q Consensus 665 ~~d~dv~aq~eai~~l~~~~~~~~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~~~~g~~~l~~~f~~~~~~~~~ 744 (794)
..|.|..-|..|+.+|.+.... .+...|.+.|.|+ -+.||..|+.+|+++..++ .+..|.++.+.
T Consensus 85 l~d~~~~vr~~a~~aL~~~~~~--~~~~~L~~~l~d~--~~~vr~~a~~aL~~~~~~~----~~~~L~~~l~d------- 149 (201)
T 3ltj_A 85 LKDEDGWVRQSAAVALGQIGDE--RAVEPLIKALKDE--DWFVRIAAAFALGEIGDER----AVEPLIKALKD------- 149 (201)
T ss_dssp TTCSSHHHHHHHHHHHHHHCCG--GGHHHHHHHTTCS--SHHHHHHHHHHHHHHTCGG----GHHHHHHHTTC-------
T ss_pred HcCCCHHHHHHHHHHHHHhCcH--HHHHHHHHHHcCC--CHHHHHHHHHHHHHhCCHH----HHHHHHHHHcC-------
Confidence 3566777777777777765432 3455677777664 3677777777777775421 23334333321
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHhccccCCCCChHHHHHHHHHhhhc
Q 003808 745 GLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKV 792 (794)
Q Consensus 745 ~i~~~n~f~~~~~y~~~~~i~~a~~~~r~~~~~~p~~~~~fl~~~l~~ 792 (794)
.+..++.+...||+.+. .+++...|.++|+-
T Consensus 150 -----------~~~~vr~~A~~aL~~~~------~~~~~~~L~~~l~d 180 (201)
T 3ltj_A 150 -----------EDGWVRQSAADALGEIG------GERVRAAMEKLAET 180 (201)
T ss_dssp -----------SSHHHHHHHHHHHHHHC------SHHHHHHHHHHHHH
T ss_pred -----------CCHHHHHHHHHHHHHhC------chhHHHHHHHHHhC
Confidence 12467778888888883 35677777777754
No 17
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=88.07 E-value=1.6 Score=41.72 Aligned_cols=100 Identities=31% Similarity=0.315 Sum_probs=64.2
Q ss_pred HHHHHHhhcCChHHHHHHHHHHHcCCCCchhHHHHHHHHhccCcchhHHHHHHHHHHHhhccccccccchHHHHHHHHhc
Q 003808 659 MWINQLEKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFYKSR 738 (794)
Q Consensus 659 m~~~qL~~d~dv~aq~eai~~l~~~~~~~~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~~~~g~~~l~~~f~~~ 738 (794)
.++..| .|.|...+..|+.+|...... .+...|.+.|.|+ -..||..|+.+|+++..++ .+..|+++...
T Consensus 49 ~L~~~l-~~~~~~vr~~a~~~L~~~~~~--~~~~~L~~~l~d~--~~~vr~~a~~aL~~~~~~~----~~~~L~~~l~d- 118 (201)
T 3ltj_A 49 PLIKAL-KDEDAWVRRAAADALGQIGDE--RAVEPLIKALKDE--DGWVRQSAAVALGQIGDER----AVEPLIKALKD- 118 (201)
T ss_dssp HHHHHT-TCSSHHHHHHHHHHHHHHCCG--GGHHHHHHHTTCS--SHHHHHHHHHHHHHHCCGG----GHHHHHHHTTC-
T ss_pred HHHHHH-cCCCHHHHHHHHHHHHhhCCH--HHHHHHHHHHcCC--CHHHHHHHHHHHHHhCcHH----HHHHHHHHHcC-
Confidence 334444 678888888888888876432 3557788888775 4678889999988876532 34445544321
Q ss_pred CCCCCCCCCCCCCCCChHHHHHHHHHHHHHhccccCCCCChHHHHHHHHHhhh
Q 003808 739 RFDENIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLK 791 (794)
Q Consensus 739 ~~~~~~~i~~~n~f~~~~~y~~~~~i~~a~~~~r~~~~~~p~~~~~fl~~~l~ 791 (794)
.+..|+.+...+|+.+.+ +++...|+.+|+
T Consensus 119 -----------------~~~~vr~~a~~aL~~~~~------~~~~~~L~~~l~ 148 (201)
T 3ltj_A 119 -----------------EDWFVRIAAAFALGEIGD------ERAVEPLIKALK 148 (201)
T ss_dssp -----------------SSHHHHHHHHHHHHHHTC------GGGHHHHHHHTT
T ss_pred -----------------CCHHHHHHHHHHHHHhCC------HHHHHHHHHHHc
Confidence 124577777788888743 234455555554
No 18
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=86.46 E-value=2.2 Score=43.16 Aligned_cols=98 Identities=20% Similarity=0.153 Sum_probs=68.9
Q ss_pred HHhhcCChHHHHHHHHHHHcCCCCchhHHHHHHHHhccCcchhHHHHHHHHHHHhhccccccccchHHHHHHHHhcCCCC
Q 003808 663 QLEKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFYKSRRFDE 742 (794)
Q Consensus 663 qL~~d~dv~aq~eai~~l~~~~~~~~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~~~~g~~~l~~~f~~~~~~~ 742 (794)
++..|.|..-|..|+.+|.........+...|.+.|.|+. ..||.+|+.+|+++..+ ..++.|++..+. +
T Consensus 166 ~~l~d~~~~vr~~a~~aL~~~~~~~~~~~~~L~~~l~d~~--~~vR~~A~~aL~~~~~~----~~~~~L~~~l~d----~ 235 (280)
T 1oyz_A 166 NLLKDPNGDVRNWAAFAININKYDNSDIRDCFVEMLQDKN--EEVRIEAIIGLSYRKDK----RVLSVLCDELKK----N 235 (280)
T ss_dssp HHHTCSSHHHHHHHHHHHHHHTCCCHHHHHHHHHHTTCSC--HHHHHHHHHHHHHTTCG----GGHHHHHHHHTS----S
T ss_pred HHHcCCCHHHHHHHHHHHHhhccCcHHHHHHHHHHhcCCC--HHHHHHHHHHHHHhCCH----hhHHHHHHHhcC----c
Confidence 3446788888999999998865445567788999998864 78999999999998743 345667666642 1
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHhccccCCCCChHHHHHHHHHhhhc
Q 003808 743 NIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQLLKV 792 (794)
Q Consensus 743 ~~~i~~~n~f~~~~~y~~~~~i~~a~~~~r~~~~~~p~~~~~fl~~~l~~ 792 (794)
+ ++.+...|++.+.+ +++...|.++|+.
T Consensus 236 -----------~-----vr~~a~~aL~~i~~------~~~~~~L~~~l~~ 263 (280)
T 1oyz_A 236 -----------T-----VYDDIIEAAGELGD------KTLLPVLDTMLYK 263 (280)
T ss_dssp -----------S-----CCHHHHHHHHHHCC------GGGHHHHHHHHTT
T ss_pred -----------c-----HHHHHHHHHHhcCc------hhhhHHHHHHHhc
Confidence 1 33555678877743 3566677777653
No 19
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=85.44 E-value=1.3 Score=39.28 Aligned_cols=48 Identities=17% Similarity=0.122 Sum_probs=33.0
Q ss_pred hcCChHHHHHHHHHHHcCCCCchhHHHHHHHHhccCcchhHHHHHHHHHHHh
Q 003808 666 KDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALAN 717 (794)
Q Consensus 666 ~d~dv~aq~eai~~l~~~~~~~~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~ 717 (794)
.|.|..-|..|+.+|.+.. ...+...|...|.|+. ..||..|+.+|++
T Consensus 83 ~d~~~~VR~~A~~aL~~~~--~~~a~~~L~~~l~d~~--~~vr~~A~~aL~~ 130 (131)
T 1te4_A 83 EDDSGFVRSGAARSLEQIG--GERVRAAMEKLAETGT--GFARKVAVNYLET 130 (131)
T ss_dssp HHCCTHHHHHHHHHHHHHC--SHHHHHHHHHHTTSCC--THHHHHHHHHGGG
T ss_pred cCCCHHHHHHHHHHHHHhC--cHHHHHHHHHHHhCCC--HHHHHHHHHHHHh
Confidence 5777777777777777764 2345566777776653 5778888877765
No 20
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=84.58 E-value=2.7 Score=42.52 Aligned_cols=58 Identities=17% Similarity=0.174 Sum_probs=40.0
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHHcCCCCchhHHHHHHHHhccCcchhHHHHHHHHHHHhhcc
Q 003808 658 QMWINQLEKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTAS 720 (794)
Q Consensus 658 ~m~~~qL~~d~dv~aq~eai~~l~~~~~~~~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~ 720 (794)
..++..| .|.|..-|..|+.+|.... +..+...|.+.|.|+. +.||..|+.+|+++..
T Consensus 26 ~~L~~~L-~~~~~~vr~~A~~~L~~~~--~~~~~~~L~~~l~d~~--~~vR~~A~~aL~~l~~ 83 (280)
T 1oyz_A 26 DELFRLL-DDHNSLKRISSARVLQLRG--GQDAVRLAIEFCSDKN--YIRRDIGAFILGQIKI 83 (280)
T ss_dssp HHHHHHT-TCSSHHHHHHHHHHHHHHC--CHHHHHHHHHHHTCSS--HHHHHHHHHHHHHSCC
T ss_pred HHHHHHH-HcCCHHHHHHHHHHHHccC--CchHHHHHHHHHcCCC--HHHHHHHHHHHHHhcc
Confidence 3455555 4677777888888888764 3345667777777753 5788888888887764
No 21
>2y3u_A Collagenase, collagenase G; hydrolase, gluzincin, metalloprotease; HET: P6G FLC; 2.55A {Clostridium histolyticum} PDB: 2y50_A* 2y6i_A*
Probab=69.48 E-value=2.5 Score=49.28 Aligned_cols=36 Identities=17% Similarity=0.256 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhhccccCCCCCC---------chHHHHHHHHHHHH
Q 003808 347 IKLSFALARQWFGVYITPELPN---------DEWLLDGLAGFLTD 382 (794)
Q Consensus 347 ~~iaHElAHQWfG~~Vt~~~w~---------d~WL~EGfA~y~~~ 382 (794)
.++.||++|.-=|-+..+..|. -.|+.||||.||+.
T Consensus 424 e~f~HEytHyLdgRy~~~G~f~~~~~y~~~~~vW~~EG~AEY~s~ 468 (785)
T 2y3u_A 424 ELFRHEYTHYLQARYLVDGLWGQGPFYEKNRLTWFDEGTAEFFAG 468 (785)
T ss_dssp HHHHHHHHHHHHHHHTSCSSTTSSGGGTTTCSHHHHHHHHHHHTT
T ss_pred ccccchhhhccccccccccccccCcccccCCCceehhhHHHHHhc
Confidence 3679999999977666666665 57999999999964
No 22
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=66.38 E-value=32 Score=35.14 Aligned_cols=100 Identities=7% Similarity=0.092 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEE-ECC--CCcccccccccchhhhcc--ccccCcccchhhhHHHHHHHH
Q 003808 277 KIHNTVEFFHNAFSHYETYLDAKFPFGSYKQVF-LAP--EMAVSSSTFGAAMGIFSS--QILYDEKVIDQAIDTSIKLSF 351 (794)
Q Consensus 277 ~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V~-vp~--~~~~~~~~~gagl~~~~~--~lL~~~~~~~~~~~~~~~iaH 351 (794)
.+..+.-.+.++.+||.++|| .=|+.- .++. |-. ...++ .|-+.-.+|.+ ...++ .....+++|
T Consensus 72 ~~~DAhy~a~~~~d~y~~~~g-r~~id~-~l~~~Vhyg~~y~NA--fWdG~~M~fGDG~~~~~p-------~~~lDVv~H 140 (301)
T 1u4g_A 72 PLNDAHFFGGVVFKLYRDWFG-TSPLTH-KLYMKVHYGRSVENA--YWDGTAMLFGDGATMFYP-------LVSLDVAAH 140 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS-SCSSSS-CEEEEESCTTTCCCE--EECSSCEEECCCCSSBSC-------SCCHHHHHH
T ss_pred hhHHHHHhHHHHHHHHHHHcC-CCCCCC-ceEEEEecCCCccCc--EecCcEEEeeCCCccccc-------ccccceeee
Confidence 345666678899999999998 556652 3332 321 11122 12212223322 11111 113458999
Q ss_pred HHHHHhhccccCCCCCCchH-HHHHHHHHHHHHHHHH
Q 003808 352 ALARQWFGVYITPELPNDEW-LLDGLAGFLTDSFIKK 387 (794)
Q Consensus 352 ElAHQWfG~~Vt~~~w~d~W-L~EGfA~y~~~~~~~~ 387 (794)
|++|--.-....+....+.. |||||+..+...+-..
T Consensus 141 E~tHGVt~~~agL~y~~eSGaLnEs~SDifG~~ve~~ 177 (301)
T 1u4g_A 141 EVSHGFTEQNSGLIYRGQSGGMNEAFSDMAGEAAEFY 177 (301)
T ss_dssp HHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceeccccCccccCCccchhHHHHHHHHHHHHHH
Confidence 99999887765555444444 9999999998765433
No 23
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=59.51 E-value=43 Score=34.24 Aligned_cols=98 Identities=5% Similarity=0.030 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCC--ccEE-EEC-C------CCcccccccccchhhhcc--ccccCcccchhhhHH
Q 003808 278 IHNTVEFFHNAFSHYETYLDAKFPFGS--YKQV-FLA-P------EMAVSSSTFGAAMGIFSS--QILYDEKVIDQAIDT 345 (794)
Q Consensus 278 ~~~~~~~~~~~l~~~e~~~g~~YP~~k--~~~V-~vp-~------~~~~~~~~~gagl~~~~~--~lL~~~~~~~~~~~~ 345 (794)
+..+...+..+.+||.+.|| .=++.- ..++ .|- + ...++ .|-+...+|.+ ...+.+- ...
T Consensus 67 avdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~Vhyg~~~~~~~y~NA--fWdg~~m~fGdGdg~~f~~~-----~~~ 138 (301)
T 1bqb_A 67 GVDANYYAKQTYDYYKNTFG-RESYDNHGSPIVSLTHVNHYGGQDNRNNA--AWIGDKMIYGDGDGRTFTNL-----SGA 138 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEECCCEETTEECTTCE--EECSSSEEECCCCSSSBSCG-----GGC
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEEeCCCCCCCCccCc--EEcCCEEEEEcCCCcccCCc-----ccc
Confidence 34566778899999999999 446642 3332 231 1 11122 12222222322 1112111 113
Q ss_pred HHHHHHHHHHHhhccccCCCCCCch-HHHHHHHHHHHHH
Q 003808 346 SIKLSFALARQWFGVYITPELPNDE-WLLDGLAGFLTDS 383 (794)
Q Consensus 346 ~~~iaHElAHQWfG~~Vt~~~w~d~-WL~EGfA~y~~~~ 383 (794)
..+++||++|--.-....+..-.+. =|||||+.++...
T Consensus 139 lDVv~HE~tHGVt~~~agl~y~~eSGaLnEs~SDifg~~ 177 (301)
T 1bqb_A 139 NDVVAHEITHGVTQQTANLEYKDQSGALNESFSDVFGYF 177 (301)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHH
T ss_pred cceeeeecccceecccCCCcccCCcCchhHHHHHHHhHh
Confidence 4589999999877665555443344 3999999999864
No 24
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=55.05 E-value=82 Score=29.35 Aligned_cols=79 Identities=23% Similarity=0.162 Sum_probs=55.2
Q ss_pred cHHHHHHHHhhcCChHHHHHHHHHHHcCCCCch---------hHHHHHHHHhccCcchhHHHHHHHHHHHhhccccc---
Q 003808 656 PVQMWINQLEKDGDVVAQAQAIAALEALPHLSF---------NVVNTLNNFLSDSKAFWRVRIEAAYALANTASEET--- 723 (794)
Q Consensus 656 ~~~m~~~qL~~d~dv~aq~eai~~l~~~~~~~~---------~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~--- 723 (794)
+.+..+..|.++.|..-|.+|+.+|......+. .+...|.+.|.++ -..||..|+.+|+.++....
T Consensus 12 ~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~~~~~~ 89 (210)
T 4db6_A 12 SELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASGGNEQI 89 (210)
T ss_dssp -CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHTTSCHHHH
T ss_pred chhHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhcCCcHHH
Confidence 345667777788999999999888876532221 1345688888876 46999999999999974321
Q ss_pred ----cccchHHHHHHHH
Q 003808 724 ----DWAGLLHLVKFYK 736 (794)
Q Consensus 724 ----~~~g~~~l~~~f~ 736 (794)
...|++.|++..+
T Consensus 90 ~~i~~~g~i~~L~~lL~ 106 (210)
T 4db6_A 90 QAVIDAGALPALVQLLS 106 (210)
T ss_dssp HHHHHTTCHHHHHHHTT
T ss_pred HHHHHCCCHHHHHHHHc
Confidence 1236777777665
No 25
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=54.13 E-value=19 Score=35.09 Aligned_cols=79 Identities=23% Similarity=0.196 Sum_probs=51.9
Q ss_pred cHHHHHHHHhhcCChHHHHHHHHHHHcCCCC---------chhHHHHHHHHhccCcchhHHHHHHHHHHHhhccccc---
Q 003808 656 PVQMWINQLEKDGDVVAQAQAIAALEALPHL---------SFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEET--- 723 (794)
Q Consensus 656 ~~~m~~~qL~~d~dv~aq~eai~~l~~~~~~---------~~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~--- 723 (794)
+++.+...+.++.|...|..|+..|...-.. ...++..|.+.|.++. ..||..|+.+|+.++....
T Consensus 12 ~~~~~~~~~L~s~~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~~~--~~v~~~a~~~L~~l~~~~~~~~ 89 (252)
T 4db8_A 12 SELPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPN--EQILQEALWALSNIASGGNEQI 89 (252)
T ss_dssp CSHHHHHHHHHSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGCSC--HHHHHHHHHHHHHHTTSCHHHH
T ss_pred chHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcCCC--HHHHHHHHHHHHHHhcCCHHHH
Confidence 4455555555778888898888888532000 0113456888888765 7999999999999986321
Q ss_pred ----cccchHHHHHHHH
Q 003808 724 ----DWAGLLHLVKFYK 736 (794)
Q Consensus 724 ----~~~g~~~l~~~f~ 736 (794)
...|++.|++..+
T Consensus 90 ~~i~~~g~i~~L~~lL~ 106 (252)
T 4db8_A 90 QAVIDAGALPALVQLLS 106 (252)
T ss_dssp HHHHHTTHHHHHHHGGG
T ss_pred HHHHHcCCHHHHHHHHc
Confidence 1235667766655
No 26
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=53.80 E-value=87 Score=32.56 Aligned_cols=104 Identities=7% Similarity=0.021 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCC--ccEE-EECC--CCcccccccccchhhhccc--cccCcccchhhhHHHHHH
Q 003808 277 KIHNTVEFFHNAFSHYETYLDAKFPFGS--YKQV-FLAP--EMAVSSSTFGAAMGIFSSQ--ILYDEKVIDQAIDTSIKL 349 (794)
Q Consensus 277 ~~~~~~~~~~~~l~~~e~~~g~~YP~~k--~~~V-~vp~--~~~~~~~~~gagl~~~~~~--lL~~~~~~~~~~~~~~~i 349 (794)
.+..+...+....+||.+.||. =++.- ..++ .|-. ...++ .|-+.-.+|.+. ..|.+- .....++
T Consensus 89 av~~ay~~~~~t~d~y~~~~gr-nsid~~G~~l~~~VHyg~~y~NA--fWdG~~M~fGDG~g~~f~~~-----~~~lDVv 160 (341)
T 2vqx_A 89 AVDEAYDYLGVTYDFFWQAFKR-NSLDNQGLPLTGSVHYGKEYQNA--FWNGQQMVFGDGDGEIFNRF-----TIAIDVV 160 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC-CSTTSSCCCEEEEESCSSSCCCE--EECSSCEEECCCCSSSBCCT-----TSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-CCCCCCCCeeEEEEecCCCccCc--eecCcEeEeeCCCCcccCCc-----ccchhhh
Confidence 3455666777899999999994 35531 3333 2321 11122 122222233211 112111 1123589
Q ss_pred HHHHHHHhhccccCCCCCCch-HHHHHHHHHHHHHHHHHh
Q 003808 350 SFALARQWFGVYITPELPNDE-WLLDGLAGFLTDSFIKKF 388 (794)
Q Consensus 350 aHElAHQWfG~~Vt~~~w~d~-WL~EGfA~y~~~~~~~~~ 388 (794)
+||++|--.-..-.+..-.+. =|||||+.++...+-...
T Consensus 161 ~HEltHGVt~~~agL~Y~~eSGaLNEs~SDifG~~ve~~~ 200 (341)
T 2vqx_A 161 GHALAHGVTESEAGLIYFQQAGALNESLSDVFGSLVKQFH 200 (341)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccceecccCCccccCCCcchhhHHHHHHHHHHHHHh
Confidence 999999877665554443343 399999999987664433
No 27
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=52.59 E-value=15 Score=31.39 Aligned_cols=16 Identities=13% Similarity=0.042 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHhhcc
Q 003808 345 TSIKLSFALARQWFGV 360 (794)
Q Consensus 345 ~~~~iaHElAHQWfG~ 360 (794)
...+||||++|-=-++
T Consensus 83 l~aVlaHElgH~~~~h 98 (107)
T 3cqb_A 83 AEAVLAHEVSHIANGD 98 (107)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCCC
Confidence 3458999999975444
No 28
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=52.55 E-value=64 Score=32.95 Aligned_cols=101 Identities=4% Similarity=0.019 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCC--CccEEE-E--CCCCcccccccccchhhhcc--ccccCcccchhhhHHHHHH
Q 003808 277 KIHNTVEFFHNAFSHYETYLDAKFPFG--SYKQVF-L--APEMAVSSSTFGAAMGIFSS--QILYDEKVIDQAIDTSIKL 349 (794)
Q Consensus 277 ~~~~~~~~~~~~l~~~e~~~g~~YP~~--k~~~V~-v--p~~~~~~~~~~gagl~~~~~--~lL~~~~~~~~~~~~~~~i 349 (794)
.+..+...+.+..+||.+.|| .=++. -+.++. | .....++ .|-....+|.+ ...+.+- .....++
T Consensus 62 aavdA~~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg~~y~NA--fW~g~~m~fGDGdg~~f~~~-----~~slDVv 133 (304)
T 4ger_A 62 AGVDAHTYAAKTYDYYKAKFG-RNSIDGRGLQLRSTVHYGSRYNNA--FWNGSQMTYGDGDGSTFIAF-----SGDPDVV 133 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEEEESSSCCCE--EECSSCEEEECCCSSSBCCG-----GGSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeEEEEEeCCCCccCc--eecCCEEEEeCCCCcccccc-----ccccchh
Confidence 455677778899999999999 45664 133332 2 2222222 22222333432 1222221 1134589
Q ss_pred HHHHHHHhhccccCCCCCCch-HHHHHHHHHHHHHHH
Q 003808 350 SFALARQWFGVYITPELPNDE-WLLDGLAGFLTDSFI 385 (794)
Q Consensus 350 aHElAHQWfG~~Vt~~~w~d~-WL~EGfA~y~~~~~~ 385 (794)
+|||.|--.-..-....-.+. =|||+|+..+..++-
T Consensus 134 aHEltHGVt~~ta~L~Y~~qsGaLNEs~SDifG~~ve 170 (304)
T 4ger_A 134 GHELTHGVTEYTSNLEYYGESGALNEAFSDVIGNDIQ 170 (304)
T ss_dssp HHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccccccccCCccccCCccchhHHHHHHHHHHhc
Confidence 999999766554332222222 399999999977664
No 29
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=51.84 E-value=47 Score=36.71 Aligned_cols=75 Identities=16% Similarity=0.205 Sum_probs=51.4
Q ss_pred HHHHHhhcCChHHHHHHHHHHHcCCCCchh---------HHHHHHHHhccCcchhHHHHHHHHHHHhhccccc-------
Q 003808 660 WINQLEKDGDVVAQAQAIAALEALPHLSFN---------VVNTLNNFLSDSKAFWRVRIEAAYALANTASEET------- 723 (794)
Q Consensus 660 ~~~qL~~d~dv~aq~eai~~l~~~~~~~~~---------~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~------- 723 (794)
.+.-|+.+.+..-|.+|+.+|....+++.. ++..|.+.|.++ .-.||..|+.+|+.++....
T Consensus 105 LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~--~~~v~e~A~~aL~nLa~d~~~~r~~v~ 182 (510)
T 3ul1_B 105 FVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASP--HAHISEQAVWALGNIAGDGSAFRDLVI 182 (510)
T ss_dssp HHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 455566666677899999988865332221 345688888775 46999999999999986422
Q ss_pred cccchHHHHHHHH
Q 003808 724 DWAGLLHLVKFYK 736 (794)
Q Consensus 724 ~~~g~~~l~~~f~ 736 (794)
...|+..|+...+
T Consensus 183 ~~G~i~~Ll~lL~ 195 (510)
T 3ul1_B 183 KHGAIDPLLALLA 195 (510)
T ss_dssp HTTCHHHHHHHTC
T ss_pred HcCChHHHHHHHH
Confidence 2245677776654
No 30
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=50.55 E-value=81 Score=32.36 Aligned_cols=101 Identities=3% Similarity=0.001 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCC--CccEE-EEC--CCCcccccccccchhhhcc--ccccCcccchhhhHHHHHH
Q 003808 277 KIHNTVEFFHNAFSHYETYLDAKFPFG--SYKQV-FLA--PEMAVSSSTFGAAMGIFSS--QILYDEKVIDQAIDTSIKL 349 (794)
Q Consensus 277 ~~~~~~~~~~~~l~~~e~~~g~~YP~~--k~~~V-~vp--~~~~~~~~~~gagl~~~~~--~lL~~~~~~~~~~~~~~~i 349 (794)
.+..+...+....+||.+.|| .=++. -+.++ .|- ....++ .|-....+|.+ ...+.+- .....++
T Consensus 69 aavdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~VHyg~~y~NA--fW~g~~m~fGDGdg~~f~~~-----~~slDVv 140 (316)
T 3dnz_A 69 PAVDAHYYAGVTYDYYKNVHN-RLSYDGNNAAIRSSVHYSQGYNNA--FWNGSQMVYGDGDGQTFIPL-----SGGIDVV 140 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEESCTTTCCCE--EECSSCEEECCCCSSSBSCG-----GGCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCceEEEEEecCCCccCc--eEcCCEEEEeCCCCcccccc-----cccccce
Confidence 445677788899999999999 55664 23333 232 111122 22222333422 1222221 1134589
Q ss_pred HHHHHHHhhccccCCCCCCch-HHHHHHHHHHHHHHH
Q 003808 350 SFALARQWFGVYITPELPNDE-WLLDGLAGFLTDSFI 385 (794)
Q Consensus 350 aHElAHQWfG~~Vt~~~w~d~-WL~EGfA~y~~~~~~ 385 (794)
+||+.|--.-..-....-.+. =|||+|+..+...+-
T Consensus 141 ~HE~tHgvt~~~agL~y~~esGaLNEs~SDifG~~ve 177 (316)
T 3dnz_A 141 AHELTHAVTDYTAGLIYQNESGAINEAISDIFGTLVE 177 (316)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeccccccccCCCcccCCccchhHHHHHHHHHHHH
Confidence 999999876655433332232 499999999986654
No 31
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=48.06 E-value=34 Score=33.63 Aligned_cols=121 Identities=13% Similarity=0.079 Sum_probs=65.6
Q ss_pred HHHHhhcCChHHHHHHHHHHHcCCCCchhHHHHHHHHhccCcchhHHHHHHHHHHHhhcc-ccccccchHHHHHHHHh--
Q 003808 661 INQLEKDGDVVAQAQAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTAS-EETDWAGLLHLVKFYKS-- 737 (794)
Q Consensus 661 ~~qL~~d~dv~aq~eai~~l~~~~~~~~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~-~~~~~~g~~~l~~~f~~-- 737 (794)
...|-++.--.+|+-|+..|... .....+...|...+.+.. -||||-.+|.++..... ....- -+..|.++-+.
T Consensus 76 a~~L~~~~~deVR~~Av~lLg~~-~~~~~~L~~ir~~va~D~-~WrVre~lA~a~~~~~~~~~pe~-~l~~~~~W~~d~n 152 (240)
T 3l9t_A 76 AFLAYQSDVYQVRMYAVFLFGYL-SKDKEILIFMRDEVSKDN-NWRVQEVLAKAFDEFCKKIEYKK-ALPIIDEWLKSSN 152 (240)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHT-TTSHHHHHHHHHTGGGCS-CHHHHHHHHHHHHHHHHHHCTTT-THHHHHHHHHCSS
T ss_pred HHHHHhCcchHHHHHHHHHHHhc-cCcHHHHHHHHHHhCCCC-CccHHHHHHHHHHHHHHhcCHHH-HHHHHHHHhcCCC
Confidence 55565555558999999999877 333333333444244332 48999999999998763 22211 11222222221
Q ss_pred ------------cCCCCCC--C-----CC-CCCCCCChHHHHHHHHHHHHHhccccCCCCChHHHHHHHHH
Q 003808 738 ------------RRFDENI--G-----LP-RPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVEFVLQ 788 (794)
Q Consensus 738 ------------~~~~~~~--~-----i~-~~n~f~~~~~y~~~~~i~~a~~~~r~~~~~~p~~~~~fl~~ 788 (794)
-+|.... . +| ..| -.+=.+.||||||-.+|-.+ .-.-|.-|++|+-.
T Consensus 153 ~~VRR~Ase~~rpW~~~~~~k~dp~~ll~iL~~-L~~D~s~yVrKSVan~LrD~---SK~~Pd~V~~~~~~ 219 (240)
T 3l9t_A 153 LHTRRAATEGLRIWTNRPYFKENPNEAIRRIAD-LKEDVSEYVRKSVGNALRDI---SKKFPDLVKIELKN 219 (240)
T ss_dssp HHHHHHHHHHTCSGGGSTTTTTCHHHHHHHHHT-TTTCSCHHHHHHHHHHHHHH---HTTCHHHHHHHHHT
T ss_pred HHHHHHHHHhhHHHhccchhhcCHHHHHHHHHH-hcCChHHHHHHHHHHHHHHH---hhhCHHHHHHHHHH
Confidence 0111000 0 00 001 11345678999998887444 44557778877754
No 32
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=46.18 E-value=44 Score=32.16 Aligned_cols=73 Identities=32% Similarity=0.308 Sum_probs=48.7
Q ss_pred HHHHhhcCChHHHHHHHHHHHcCCCCch---------hHHHHHHHHhccCcchhHHHHHHHHHHHhhccccc-------c
Q 003808 661 INQLEKDGDVVAQAQAIAALEALPHLSF---------NVVNTLNNFLSDSKAFWRVRIEAAYALANTASEET-------D 724 (794)
Q Consensus 661 ~~qL~~d~dv~aq~eai~~l~~~~~~~~---------~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~-------~ 724 (794)
+..| ++.|...|.+|+.+|......+. .+...|.+.|.++. -.||..|+.+|+.++.... .
T Consensus 8 ~~~L-~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~--~~v~~~a~~~L~~l~~~~~~~~~~~~~ 84 (252)
T 4hxt_A 8 VKLL-TSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTD--SEVQKEAARALANIASGPDEAIKAIVD 84 (252)
T ss_dssp HHHT-TCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSC--HHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHH-cCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCC--HHHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 3444 45667778888888876532221 24566888888764 7999999999999986521 1
Q ss_pred ccchHHHHHHHH
Q 003808 725 WAGLLHLVKFYK 736 (794)
Q Consensus 725 ~~g~~~l~~~f~ 736 (794)
..+++.|++..+
T Consensus 85 ~~~i~~l~~ll~ 96 (252)
T 4hxt_A 85 AGGVEVLVKLLT 96 (252)
T ss_dssp TTHHHHHHHHTT
T ss_pred CCCHHHHHHHHc
Confidence 135666666654
No 33
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=44.13 E-value=99 Score=29.48 Aligned_cols=72 Identities=33% Similarity=0.295 Sum_probs=48.7
Q ss_pred HHhhcCChHHHHHHHHHHHcCCCCch---------hHHHHHHHHhccCcchhHHHHHHHHHHHhhccccc-------ccc
Q 003808 663 QLEKDGDVVAQAQAIAALEALPHLSF---------NVVNTLNNFLSDSKAFWRVRIEAAYALANTASEET-------DWA 726 (794)
Q Consensus 663 qL~~d~dv~aq~eai~~l~~~~~~~~---------~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~-------~~~ 726 (794)
++..+.+...|..|+.+|......+. .....|.+.|.++. ..||..|+.+|+.++.... ...
T Consensus 51 ~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~~~--~~v~~~a~~~L~~l~~~~~~~~~~~~~~~ 128 (252)
T 4hxt_A 51 KLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTD--SEVQKEAARALANIASGPDEAIKAIVDAG 128 (252)
T ss_dssp HHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSS--HHHHHHHHHHHHHHTTSCHHHHHHHHHTT
T ss_pred HHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHcCCC--HHHHHHHHHHHHHHHcCCHHHHHHHHHCC
Confidence 44566777888888888887643311 24566888887754 7999999999999984321 113
Q ss_pred chHHHHHHHH
Q 003808 727 GLLHLVKFYK 736 (794)
Q Consensus 727 g~~~l~~~f~ 736 (794)
+++.|+++.+
T Consensus 129 ~i~~L~~~l~ 138 (252)
T 4hxt_A 129 GVEVLVKLLT 138 (252)
T ss_dssp HHHHHHHHTT
T ss_pred CHHHHHHHHc
Confidence 4666766655
No 34
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=43.44 E-value=40 Score=38.07 Aligned_cols=61 Identities=20% Similarity=0.266 Sum_probs=45.5
Q ss_pred HHHHhhcCChHHHHHHHHHHHcC----CCCch--hHHHHHHHHhccCcchhHHHHHHHHHHHhhccccc
Q 003808 661 INQLEKDGDVVAQAQAIAALEAL----PHLSF--NVVNTLNNFLSDSKAFWRVRIEAAYALANTASEET 723 (794)
Q Consensus 661 ~~qL~~d~dv~aq~eai~~l~~~----~~~~~--~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~ 723 (794)
+.++..|++..-|..|+.+|.+. |..-. .....|.+.|.|+. ..||..|+.+|..+.....
T Consensus 126 l~~~L~d~~~~VRk~A~~al~~i~~~~p~~~~~~~~~~~l~~lL~d~d--~~V~~~A~~aL~~i~~~~~ 192 (591)
T 2vgl_B 126 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSN--PMVVANAVAALSEISESHP 192 (591)
T ss_dssp HHHHSSCSCHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHTTSCSC--HHHHHHHHHHHHHHTTSCC
T ss_pred HHHHcCCCChHHHHHHHHHHHHHHhhChhhcccccHHHHHHHHhCCCC--hhHHHHHHHHHHHHHhhCC
Confidence 45666799999999999888754 32211 24567888898765 6999999999999887543
No 35
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=42.31 E-value=1.4e+02 Score=33.42 Aligned_cols=54 Identities=20% Similarity=0.170 Sum_probs=40.7
Q ss_pred hcCChHHHHHHHHHHHcCCCCc--hhHHHHHHHHhccCcchhHHHHHHHHHHHhhccc
Q 003808 666 KDGDVVAQAQAIAALEALPHLS--FNVVNTLNNFLSDSKAFWRVRIEAAYALANTASE 721 (794)
Q Consensus 666 ~d~dv~aq~eai~~l~~~~~~~--~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~ 721 (794)
+|++..-|.-|+++|+...... ..+...|.++|.|+. ..||..||.+|.++...
T Consensus 96 ~~~n~~ir~~AL~~L~~i~~~~~~~~l~~~l~~~L~d~~--~~VRk~A~~al~~i~~~ 151 (591)
T 2vgl_B 96 EDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDED--PYVRKTAAVCVAKLHDI 151 (591)
T ss_dssp SSSSHHHHHHHHHHHHTCCSGGGHHHHHHHHHHHSSCSC--HHHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHcCCCC--hHHHHHHHHHHHHHHhh
Confidence 4678888899999999875332 123344888888764 68999999999998753
No 36
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=41.52 E-value=1.1e+02 Score=36.57 Aligned_cols=63 Identities=17% Similarity=0.112 Sum_probs=44.3
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHH--cCCCCchhHHHH-HHHHhccCcchhHHHHHHHHHHHhhcccc
Q 003808 658 QMWINQLEKDGDVVAQAQAIAALE--ALPHLSFNVVNT-LNNFLSDSKAFWRVRIEAAYALANTASEE 722 (794)
Q Consensus 658 ~m~~~qL~~d~dv~aq~eai~~l~--~~~~~~~~~~~~-L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~ 722 (794)
.+.+..|..+.|-+.|.-|+.+|+ ...+++..++.. |..+..|... -||..|+.+|+.+...+
T Consensus 544 ~~li~~L~~~~dp~vRygaa~alglAyaGTGn~~aIq~LL~~~~~d~~d--~VRraAViaLGlI~~g~ 609 (963)
T 4ady_A 544 DDLITKMLASDESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAVSDSND--DVRRAAVIALGFVLLRD 609 (963)
T ss_dssp HHHHHHHHHCSCHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHCSCH--HHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhccCCcH--HHHHHHHHHHHhhccCC
Confidence 577889988899999998876554 555666666664 4444555444 38899999999865443
No 37
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=36.87 E-value=1e+02 Score=33.94 Aligned_cols=76 Identities=16% Similarity=0.184 Sum_probs=50.7
Q ss_pred HHHHHHhhcCChHHHHHHHHHHHcCCCCchh---------HHHHHHHHhccCcchhHHHHHHHHHHHhhccccc------
Q 003808 659 MWINQLEKDGDVVAQAQAIAALEALPHLSFN---------VVNTLNNFLSDSKAFWRVRIEAAYALANTASEET------ 723 (794)
Q Consensus 659 m~~~qL~~d~dv~aq~eai~~l~~~~~~~~~---------~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~------ 723 (794)
..+.-|..+.+..-|.+|+.+|.....++.. ++..|.+.|.++ .-.||..|+.+|+.++....
T Consensus 123 ~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s~--~~~v~e~A~~aL~nLa~~~~~~r~~i 200 (529)
T 3tpo_A 123 KFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASP--HAHISEQAVWALGNIAGAGSAFRDLV 200 (529)
T ss_dssp HHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 3456676677788899998888865332221 334577777665 47999999999999986432
Q ss_pred -cccchHHHHHHHH
Q 003808 724 -DWAGLLHLVKFYK 736 (794)
Q Consensus 724 -~~~g~~~l~~~f~ 736 (794)
...|+..|+...+
T Consensus 201 ~~~g~i~~Ll~lL~ 214 (529)
T 3tpo_A 201 IKHGAIDPLLALLA 214 (529)
T ss_dssp HHTTCHHHHHHTTC
T ss_pred HHcCCcHHHHHHHh
Confidence 2245666666554
No 38
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=33.77 E-value=1.9e+02 Score=29.38 Aligned_cols=98 Identities=8% Similarity=0.124 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCccEE-EE--CCCCcccccccccchhhhcc--ccccCcccchhhhHHHHHHHH
Q 003808 277 KIHNTVEFFHNAFSHYETYLDAKFPFGSYKQV-FL--APEMAVSSSTFGAAMGIFSS--QILYDEKVIDQAIDTSIKLSF 351 (794)
Q Consensus 277 ~~~~~~~~~~~~l~~~e~~~g~~YP~~k~~~V-~v--p~~~~~~~~~~gagl~~~~~--~lL~~~~~~~~~~~~~~~iaH 351 (794)
.+..+.-.+..+.+||.++|| .=|+. ..++ .| .....++ .|-+.-.+|.+ ..+++ .....+++|
T Consensus 73 ~~~DAhy~a~~t~d~y~~~~g-r~~id-~~l~~~VHyg~~y~NA--fWdg~~m~fGDG~~~~~~-------~~slDVv~H 141 (306)
T 3nqx_A 73 PLNDAHFFGNVIFNMYNDWLG-TAPLS-FQLQMRVHYSSNYENA--FWDGSAMTFGDGQNTFYP-------LVSLDVSAH 141 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS-SCSSS-SCEEEEEEESSSCCCE--EECSSCEEEECCCSSBSC-------SCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcC-CCCCC-CceEEEEecCCCccCc--cccCCEEEEeCCCccccc-------ccccchhhh
Confidence 355666678889999999999 44664 2333 22 1111222 22222233322 11111 123458999
Q ss_pred HHHHHhhccccCCCCCCc-hHHHHHHHHHHHHHHH
Q 003808 352 ALARQWFGVYITPELPND-EWLLDGLAGFLTDSFI 385 (794)
Q Consensus 352 ElAHQWfG~~Vt~~~w~d-~WL~EGfA~y~~~~~~ 385 (794)
|+.|--.-..-.+..-.+ -=|||||+..+...+-
T Consensus 142 E~tHGvt~~~a~l~y~~esGaLnEs~SDifg~~ve 176 (306)
T 3nqx_A 142 EVSHGFTEQNSGLIYNGKPGGLNEAFSDMAGEAAE 176 (306)
T ss_dssp HHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccccCCCCCccCCCCCcccchHHHHHHHHHH
Confidence 999987655433322111 2599999999987654
No 39
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=32.92 E-value=1.1e+02 Score=32.38 Aligned_cols=76 Identities=22% Similarity=0.300 Sum_probs=50.9
Q ss_pred HHHHHHhhcCChHHHHHHHHHHHcCCCCc---------hhHHHHHHHHhccCcchhHHHHHHHHHHHhhccccc------
Q 003808 659 MWINQLEKDGDVVAQAQAIAALEALPHLS---------FNVVNTLNNFLSDSKAFWRVRIEAAYALANTASEET------ 723 (794)
Q Consensus 659 m~~~qL~~d~dv~aq~eai~~l~~~~~~~---------~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~------ 723 (794)
..+..|+.+.+...|.+|+..|......+ ..+...|.+.|.++ -..||..|+.+|+.++....
T Consensus 68 ~L~~~L~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~--~~~vr~~a~~~L~~l~~~~~~~~~~~ 145 (450)
T 2jdq_A 68 RFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSE--FEDVQEQAVWALGNIAGDSTMCRDYV 145 (450)
T ss_dssp HHHHHHTCTTCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHccCCHHHHHHH
Confidence 34555655447888998888887643211 12456688888875 47999999999999886432
Q ss_pred -cccchHHHHHHHH
Q 003808 724 -DWAGLLHLVKFYK 736 (794)
Q Consensus 724 -~~~g~~~l~~~f~ 736 (794)
...+++.|++..+
T Consensus 146 ~~~~~i~~L~~~l~ 159 (450)
T 2jdq_A 146 LDCNILPPLLQLFS 159 (450)
T ss_dssp HHTTCHHHHHHHTT
T ss_pred HHCCCHHHHHHHhc
Confidence 1235666766654
No 40
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=30.14 E-value=34 Score=34.03 Aligned_cols=54 Identities=6% Similarity=-0.034 Sum_probs=27.4
Q ss_pred CccEEEECCCCcccccccccchhhhccccccCcccchhhhHHHHHHHHHHHHHhhccc
Q 003808 304 SYKQVFLAPEMAVSSSTFGAAMGIFSSQILYDEKVIDQAIDTSIKLSFALARQWFGVY 361 (794)
Q Consensus 304 k~~~V~vp~~~~~~~~~~gagl~~~~~~lL~~~~~~~~~~~~~~~iaHElAHQWfG~~ 361 (794)
.+.+.++++...++.. .++|.+.+.+.||-.-+ ...+...+||||++|-=-++.
T Consensus 63 ~~~v~v~~~~~~NAfa-~~gg~I~v~~gLl~~l~---~~~ELaaVLaHElgH~~~~H~ 116 (253)
T 3c37_A 63 DYVFKVVKDDSVNAFA-IPGGRVYVHTGLLKAAD---NETELAGVLAHEINHAVARHG 116 (253)
T ss_dssp CCEEEEECCCSCCEEE-ETTTEEEEEHHHHHHCS---SHHHHHHHHHHHHHHHHTTHH
T ss_pred CeEEEEEeCCCCCeeE-cCCCeEEeeHHHHhhCC---CHHHHHHHHHHHHHHHHCcCH
Confidence 4566677654334422 22344444555442110 112344589999999755443
No 41
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=27.71 E-value=26 Score=31.02 Aligned_cols=25 Identities=4% Similarity=-0.098 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCCc
Q 003808 344 DTSIKLSFALARQWFGVYITPELPND 369 (794)
Q Consensus 344 ~~~~~iaHElAHQWfG~~Vt~~~w~d 369 (794)
..+.++.||+||.+ |.+-..+.|+|
T Consensus 88 ~V~~tvvHEiaHhf-e~lag~~glsd 112 (130)
T 2ejq_A 88 EVWETMLHELRHHL-ESLAGRDDLVQ 112 (130)
T ss_dssp HHHHHHHHHHHHHH-HHHHTTC----
T ss_pred HHHHHHHHHhHHHH-HhhcccCCCCH
Confidence 45668999999984 55555555544
No 42
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=27.54 E-value=1.4e+02 Score=32.55 Aligned_cols=75 Identities=24% Similarity=0.213 Sum_probs=48.4
Q ss_pred HHHHHHhhcCChHHHHHHHHHHHcCCCCch---------hHHHHHHHHhccCcchhHHHHHHHHHHHhhccccc------
Q 003808 659 MWINQLEKDGDVVAQAQAIAALEALPHLSF---------NVVNTLNNFLSDSKAFWRVRIEAAYALANTASEET------ 723 (794)
Q Consensus 659 m~~~qL~~d~dv~aq~eai~~l~~~~~~~~---------~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~------ 723 (794)
..+..|..+.+...|.+|+.+|......+. .++..|.+.|.++ --.||..|+.+|+.++....
T Consensus 121 ~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L~~lL~~~--~~~v~~~a~~aL~~l~~~~~~~~~~i 198 (528)
T 4b8j_A 121 RFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSS--SDDVREQAVWALGNVAGDSPKCRDLV 198 (528)
T ss_dssp HHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHHHHHhcCC--CHHHHHHHHHHHHHHhCCChhhHHHH
Confidence 345555544347788888888876533221 1455688888775 46999999999999975422
Q ss_pred -cccchHHHHHHH
Q 003808 724 -DWAGLLHLVKFY 735 (794)
Q Consensus 724 -~~~g~~~l~~~f 735 (794)
...+++.|++..
T Consensus 199 ~~~g~l~~Ll~lL 211 (528)
T 4b8j_A 199 LANGALLPLLAQL 211 (528)
T ss_dssp HHTTCHHHHHHTC
T ss_pred HHCCcHHHHHHHH
Confidence 113456665544
No 43
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=26.55 E-value=84 Score=29.27 Aligned_cols=74 Identities=26% Similarity=0.242 Sum_probs=49.5
Q ss_pred HHHHhhcCChHHHHHHHHHHHcCCCCchh---------HHHHHHHHhccCcchhHHHHHHHHHHHhhccccc-------c
Q 003808 661 INQLEKDGDVVAQAQAIAALEALPHLSFN---------VVNTLNNFLSDSKAFWRVRIEAAYALANTASEET-------D 724 (794)
Q Consensus 661 ~~qL~~d~dv~aq~eai~~l~~~~~~~~~---------~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~-------~ 724 (794)
+-+|..+.+...|..|+.+|......+.. ....|.+.|.+.. ..||..|+.+|+.++.... .
T Consensus 59 L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~--~~v~~~a~~~L~~l~~~~~~~~~~~~~ 136 (210)
T 4db6_A 59 LVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPN--EQILQEALWALSNIASGGNEQIQAVID 136 (210)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCSC--HHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHcCCc--HHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 33455667888888898888865422211 3456888887764 7999999999999985322 1
Q ss_pred ccchHHHHHHHH
Q 003808 725 WAGLLHLVKFYK 736 (794)
Q Consensus 725 ~~g~~~l~~~f~ 736 (794)
..+++.|++..+
T Consensus 137 ~~~i~~L~~ll~ 148 (210)
T 4db6_A 137 AGALPALVQLLS 148 (210)
T ss_dssp TTHHHHHHHHTT
T ss_pred cCcHHHHHHHHc
Confidence 234666666654
No 44
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=25.90 E-value=1e+02 Score=29.65 Aligned_cols=73 Identities=25% Similarity=0.225 Sum_probs=49.6
Q ss_pred HHHhhcCChHHHHHHHHHHHcCCCCch---------hHHHHHHHHhccCcchhHHHHHHHHHHHhhccccccc-------
Q 003808 662 NQLEKDGDVVAQAQAIAALEALPHLSF---------NVVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDW------- 725 (794)
Q Consensus 662 ~qL~~d~dv~aq~eai~~l~~~~~~~~---------~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~~~------- 725 (794)
-++.++.+...|..|+.+|......+. .+...|.+.|.++. ..||..|+.+|+.++......
T Consensus 60 ~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~--~~v~~~a~~~L~~l~~~~~~~~~~~~~~ 137 (252)
T 4db8_A 60 VQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPN--EQILQEALWALSNIASGGNEQIQAVIDA 137 (252)
T ss_dssp HHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSC--HHHHHHHHHHHHHHTTSCHHHHHHHHHT
T ss_pred HHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCC--HHHHHHHHHHHHHhhcCCchHHHHHHHC
Confidence 344566777788888888886543221 14566888888753 799999999999987653322
Q ss_pred cchHHHHHHHH
Q 003808 726 AGLLHLVKFYK 736 (794)
Q Consensus 726 ~g~~~l~~~f~ 736 (794)
.+++.|+++.+
T Consensus 138 ~~i~~L~~lL~ 148 (252)
T 4db8_A 138 GALPALVQLLS 148 (252)
T ss_dssp THHHHHHHGGG
T ss_pred CCHHHHHHHHh
Confidence 35666766654
No 45
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=23.74 E-value=2.5e+02 Score=30.55 Aligned_cols=72 Identities=24% Similarity=0.264 Sum_probs=46.5
Q ss_pred HhhcCChHHHHHHHHHHHcCCCCch---------hHHHHHHHHhccCcchhHHHHHHHHHHHhhccccc-------cccc
Q 003808 664 LEKDGDVVAQAQAIAALEALPHLSF---------NVVNTLNNFLSDSKAFWRVRIEAAYALANTASEET-------DWAG 727 (794)
Q Consensus 664 L~~d~dv~aq~eai~~l~~~~~~~~---------~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~-------~~~g 727 (794)
|..+.+...+..|+.+|........ .+...|...|.+.. +.||.+|+.+|+.++.... ...+
T Consensus 307 lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~--~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~ 384 (530)
T 1wa5_B 307 LLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPK--ENIKKEACWTISNITAGNTEQIQAVIDANL 384 (530)
T ss_dssp GGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSC--HHHHHHHHHHHHHHTTSCHHHHHHHHHTTC
T ss_pred HHCCCChhhHHHHHHHHHHHHcCCHHHHHHHHHcchHHHHHHHHcCCC--HHHHHHHHHHHHHHHcCCHHHHHHHHHCCC
Confidence 3455666677777777775532211 23456777887763 8999999999999874211 1235
Q ss_pred hHHHHHHHHh
Q 003808 728 LLHLVKFYKS 737 (794)
Q Consensus 728 ~~~l~~~f~~ 737 (794)
++.|++..+.
T Consensus 385 l~~L~~lL~~ 394 (530)
T 1wa5_B 385 IPPLVKLLEV 394 (530)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 6777777653
No 46
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=23.47 E-value=1.5e+02 Score=33.48 Aligned_cols=69 Identities=14% Similarity=0.069 Sum_probs=37.2
Q ss_pred hcCChHHHHHHHHHHHcCCCCchh----HHHHHHHHhccCcchhHHHHHHHHHHHhhccccccccchHHHHHHHH
Q 003808 666 KDGDVVAQAQAIAALEALPHLSFN----VVNTLNNFLSDSKAFWRVRIEAAYALANTASEETDWAGLLHLVKFYK 736 (794)
Q Consensus 666 ~d~dv~aq~eai~~l~~~~~~~~~----~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~~~~g~~~l~~~f~ 736 (794)
.++|-.-|.-|+.+|......... ....+..+|.|+. --||..|...|.++.++.+--.=+..|+.+..
T Consensus 323 ~~~d~~vr~~aL~~L~~i~~~~p~~~~~~~~~i~~~l~d~d--~~Ir~~alelL~~l~~~~nv~~iv~eL~~~l~ 395 (618)
T 1w63_A 323 LNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLD--VSIKRRAMELSFALVNGNNIRGMMKELLYFLD 395 (618)
T ss_dssp TCSSTTTHHHHHHHHHHHHHHHHHHHGGGHHHHHHGGGSSC--HHHHHHHHHHHHHHCCSSSTHHHHHHHHHHHH
T ss_pred hCCCCchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCC--hhHHHHHHHHHHHHcccccHHHHHHHHHHHHH
Confidence 345555566666555543211111 1234666777765 46888888888888876431111344444444
No 47
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=22.32 E-value=1.3e+02 Score=33.08 Aligned_cols=74 Identities=18% Similarity=0.237 Sum_probs=48.5
Q ss_pred HHHHhhcCChHHHHHHHHHHHcCCCCch---------hHHHHHHHHhccCcchhHHHHHHHHHHHhhccccc-------c
Q 003808 661 INQLEKDGDVVAQAQAIAALEALPHLSF---------NVVNTLNNFLSDSKAFWRVRIEAAYALANTASEET-------D 724 (794)
Q Consensus 661 ~~qL~~d~dv~aq~eai~~l~~~~~~~~---------~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~~~-------~ 724 (794)
+..|..+.+..-|.+|+.+|......+. .+...|.+.|.+. -..||..|+.+|+.++.... .
T Consensus 136 v~~L~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~--~~~vr~~A~~aL~~l~~~~~~~~~~~~~ 213 (530)
T 1wa5_B 136 VEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTG--SVEVKEQAIWALGNVAGDSTDYRDYVLQ 213 (530)
T ss_dssp HHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHC--CHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhCCCccchHHHHH
Confidence 4444333378889999998887643221 1245677888764 47999999999999986421 1
Q ss_pred ccchHHHHHHHH
Q 003808 725 WAGLLHLVKFYK 736 (794)
Q Consensus 725 ~~g~~~l~~~f~ 736 (794)
..+++.|++..+
T Consensus 214 ~~~l~~L~~ll~ 225 (530)
T 1wa5_B 214 CNAMEPILGLFN 225 (530)
T ss_dssp TTCHHHHHHGGG
T ss_pred cCcHHHHHHHhc
Confidence 235666766654
No 48
>2ys9_A Homeobox and leucine zipper protein homez; homeodomain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.72 E-value=1.1e+02 Score=23.67 Aligned_cols=42 Identities=12% Similarity=0.200 Sum_probs=30.7
Q ss_pred HHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhcCCCcccHHhHHHhhhcC
Q 003808 460 KILQNIISRAQGASPVRTLSTKEFRHFANKVGNLERPFLKEFFPRWVGT 508 (794)
Q Consensus 460 ~~L~~yl~~~~~~~~~~~~st~~f~~~~e~~~~~~~~dl~~f~~~Wv~~ 508 (794)
+.|+.|+..|+. +..+|+.++|++.. .+...+++.|..|...
T Consensus 19 e~L~~Yy~~hk~------L~EeDl~~L~~ksk-ms~qqvkdwFa~k~~E 60 (70)
T 2ys9_A 19 QPLERYWAAHQQ------LRETDIPQLSQASR-LSTQQVLDWFDSRLPQ 60 (70)
T ss_dssp HHHHHHHHHTCC------CCTTHHHHHHHHTT-CCHHHHHHHHHHHSCC
T ss_pred hHHHHHHHHhcc------cchhhHHHHHHHhC-CCHHHHHHHHHhcccc
Confidence 678899999875 57799999999853 3345677777666543
No 49
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=20.75 E-value=1.7e+02 Score=29.69 Aligned_cols=107 Identities=15% Similarity=0.192 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHHHcCCCCchhHHHH--------HHH-HhccCcchhHHHHHHHHHHHhhccccc-------cccchHHHH
Q 003808 669 DVVAQAQAIAALEALPHLSFNVVNT--------LNN-FLSDSKAFWRVRIEAAYALANTASEET-------DWAGLLHLV 732 (794)
Q Consensus 669 dv~aq~eai~~l~~~~~~~~~~~~~--------L~~-~l~~~~~f~~vR~~Aa~aL~~~~~~~~-------~~~g~~~l~ 732 (794)
+...+..|+..|...-......... |.. .|.++.. .||..||.+|+.++.... ...|++.|+
T Consensus 53 ~~e~k~~Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL~s~~~--~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll 130 (296)
T 1xqr_A 53 DQQEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAA--GLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLL 130 (296)
T ss_dssp HHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSSH--HHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhChhhHHHHHHcCCHHHHHHHHHcCCCH--HHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHH
Q ss_pred HHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHhccccCCCCChHHHHH-----HHHHhhhccC
Q 003808 733 KFYKSRRFDENIGLPRPNDFRDFSEYFVLEAIPHAVAMVRAADNKSPREAVE-----FVLQLLKVMD 794 (794)
Q Consensus 733 ~~f~~~~~~~~~~i~~~n~f~~~~~y~~~~~i~~a~~~~r~~~~~~p~~~~~-----fl~~~l~~nd 794 (794)
+..++ +...-...+|+ .|||.+=..+...+..+.+ .|+.+|+..|
T Consensus 131 ~LL~~----------------~~~~~v~~~A~-~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d 180 (296)
T 1xqr_A 131 RLLDR----------------DACDTVRVKAL-FAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQV 180 (296)
T ss_dssp HHHHH----------------CSCHHHHHHHH-HHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSC
T ss_pred HHHcc----------------CCCHHHHHHHH-HHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCC
No 50
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=20.42 E-value=85 Score=34.66 Aligned_cols=57 Identities=23% Similarity=0.250 Sum_probs=36.9
Q ss_pred HHHhhcCChHHHHHHHHHHHcCCC--Cc----hhHHHHHHHHhccCcchhHHHHHHHHHHHhhcc
Q 003808 662 NQLEKDGDVVAQAQAIAALEALPH--LS----FNVVNTLNNFLSDSKAFWRVRIEAAYALANTAS 720 (794)
Q Consensus 662 ~qL~~d~dv~aq~eai~~l~~~~~--~~----~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~ 720 (794)
.++..|.+...|..|+.+|..... .. ..+...|.+.+.|+ -|+||..|+.+|+.+..
T Consensus 209 ~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~~~~d~--~~~vR~~a~~~l~~l~~ 271 (588)
T 1b3u_A 209 SNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDK--SWRVRYMVADKFTELQK 271 (588)
T ss_dssp HHHHTCSCHHHHTTHHHHHHHHHHHSCHHHHHHHTHHHHHHHHTCS--SHHHHHHHHHTHHHHHH
T ss_pred HHHhcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHccCC--CHHHHHHHHHHHHHHHH
Confidence 345567777777777777664311 01 11233456666664 59999999999998875
No 51
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=20.02 E-value=2.6e+02 Score=29.15 Aligned_cols=45 Identities=16% Similarity=0.147 Sum_probs=23.4
Q ss_pred HHHHHHHcCCCCchhHHHHHHHHhccCcchhHHHHHHHHHHHhhccc
Q 003808 675 QAIAALEALPHLSFNVVNTLNNFLSDSKAFWRVRIEAAYALANTASE 721 (794)
Q Consensus 675 eai~~l~~~~~~~~~~~~~L~~~l~~~~~f~~vR~~Aa~aL~~~~~~ 721 (794)
-++..+++.+....-+++.|.+=+.+...+ ||..|.++|+++..+
T Consensus 90 Lyl~~~~~~~~e~iLv~Nsl~kDl~~~N~~--iR~lALRtL~~I~~~ 134 (355)
T 3tjz_B 90 LTIKEMSCIAEDVIIVTSSLTKDMTGKEDS--YRGPAVRALCQITDS 134 (355)
T ss_dssp HHHHHHTTTSSCGGGGHHHHHHHHHSSCHH--HHHHHHHHHHHHCCT
T ss_pred HHHHHhCCCHHHHHHHHHHHHhhcCCCcHh--HHHHHHHHHhcCCCH
Confidence 333444444433444555565556555442 566666666666554
Done!