Query         003814
Match_columns 793
No_of_seqs    790 out of 4630
Neff          8.4 
Searched_HMMs 46136
Date          Thu Mar 28 12:31:59 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003814.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003814hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PHA02876 ankyrin repeat protei 100.0 4.1E-45 8.8E-50  436.3  31.9  345  238-617    38-486 (682)
  2 KOG0510 Ankyrin repeat protein 100.0 2.1E-42 4.6E-47  381.4  32.7  421  218-657    62-534 (929)
  3 PHA02946 ankyin-like protein;  100.0 3.2E-42 6.9E-47  387.8  31.4  308  218-570    52-370 (446)
  4 PHA02946 ankyin-like protein;  100.0   1E-41 2.3E-46  383.6  31.1  318  241-619    37-367 (446)
  5 PHA02876 ankyrin repeat protei 100.0 2.1E-41 4.5E-46  404.3  33.9  403  148-579    41-500 (682)
  6 PHA02874 ankyrin repeat protei 100.0 7.4E-40 1.6E-44  370.7  32.0  274  244-567     4-300 (434)
  7 PHA02730 ankyrin-like protein; 100.0 1.4E-39   3E-44  369.6  30.5  347  233-617    32-506 (672)
  8 PHA02917 ankyrin-like protein; 100.0   2E-39 4.4E-44  378.4  31.5  362  210-616    40-494 (661)
  9 PHA02716 CPXV016; CPX019; EVM0 100.0 2.9E-39 6.2E-44  374.0  31.8  328  218-569   155-581 (764)
 10 KOG0510 Ankyrin repeat protein 100.0 3.1E-40 6.7E-45  364.4  22.4  325  234-579    54-403 (929)
 11 PHA03095 ankyrin-like protein; 100.0 6.1E-39 1.3E-43  367.8  29.4  276  246-569    19-304 (471)
 12 PHA02716 CPXV016; CPX019; EVM0 100.0 3.7E-39 7.9E-44  373.1  27.7  338  234-581   130-568 (764)
 13 PHA02874 ankyrin repeat protei 100.0 4.9E-38 1.1E-42  355.8  32.2  284  233-566    27-334 (434)
 14 PHA03095 ankyrin-like protein; 100.0 9.5E-38   2E-42  357.9  31.3  282  218-546    27-318 (471)
 15 PHA03100 ankyrin repeat protei 100.0 5.6E-38 1.2E-42  360.6  28.8  280  220-546    17-311 (480)
 16 PHA03100 ankyrin repeat protei 100.0 4.7E-38   1E-42  361.3  27.4  280  252-581    13-311 (480)
 17 PHA02917 ankyrin-like protein; 100.0 1.1E-36 2.3E-41  355.5  33.2  368  224-618    18-463 (661)
 18 KOG4177 Ankyrin [Cell wall/mem 100.0 1.2E-38 2.5E-43  374.1  15.0  432  153-620   181-657 (1143)
 19 PHA02730 ankyrin-like protein; 100.0 2.1E-36 4.6E-41  343.7  32.0  347  218-583    57-528 (672)
 20 KOG4177 Ankyrin [Cell wall/mem 100.0 1.1E-37 2.4E-42  365.9  19.7  393  152-567   246-656 (1143)
 21 PHA02878 ankyrin repeat protei 100.0 3.7E-36 7.9E-41  344.5  26.8  274  237-566    33-311 (477)
 22 PHA02878 ankyrin repeat protei 100.0 2.5E-36 5.4E-41  345.9  24.0  271  273-617    34-310 (477)
 23 PHA02989 ankyrin repeat protei 100.0 2.9E-35 6.2E-40  338.3  30.1  283  218-545    16-316 (494)
 24 PHA02791 ankyrin-like protein; 100.0 2.7E-35 5.9E-40  309.8  26.1  235  251-544     9-246 (284)
 25 PHA02989 ankyrin repeat protei 100.0 4.4E-35 9.5E-40  336.8  28.9  279  244-570     3-304 (494)
 26 PHA02875 ankyrin repeat protei 100.0 8.2E-35 1.8E-39  327.7  28.3  247  241-566     2-249 (413)
 27 KOG0508 Ankyrin repeat protein 100.0 3.8E-35 8.2E-40  305.9  22.5  185  236-425    37-228 (615)
 28 KOG4412 26S proteasome regulat 100.0 2.6E-35 5.7E-40  271.9  15.4  176  242-420     4-180 (226)
 29 PHA02791 ankyrin-like protein; 100.0 1.7E-34 3.7E-39  303.7  23.5  222  286-562     9-233 (284)
 30 PHA02875 ankyrin repeat protei 100.0 6.3E-34 1.4E-38  320.6  28.8  241  218-539    15-262 (413)
 31 KOG4412 26S proteasome regulat 100.0 3.2E-35   7E-40  271.3  12.9  184  233-421    29-213 (226)
 32 PHA02798 ankyrin-like protein; 100.0 1.2E-33 2.5E-38  324.6  27.3  254  253-546    50-319 (489)
 33 PHA02798 ankyrin-like protein; 100.0   3E-33 6.4E-38  321.2  28.1  281  253-582    17-320 (489)
 34 KOG0508 Ankyrin repeat protein 100.0 3.3E-33 7.2E-38  291.4  17.7  213  247-470    10-235 (615)
 35 PHA02792 ankyrin-like protein; 100.0 6.1E-31 1.3E-35  296.0  24.5  348  221-616    21-452 (631)
 36 KOG0509 Ankyrin repeat and DHH 100.0 2.9E-30 6.4E-35  281.7  17.3  211  277-565    45-255 (600)
 37 KOG0509 Ankyrin repeat and DHH 100.0 1.3E-29 2.8E-34  276.7  17.3  178  243-424    46-224 (600)
 38 PHA02792 ankyrin-like protein; 100.0   3E-28 6.6E-33  274.4  27.3  308  233-564    63-452 (631)
 39 PHA02859 ankyrin repeat protei 100.0 2.8E-27 6.1E-32  240.0  20.1  176  239-423    19-203 (209)
 40 PHA02859 ankyrin repeat protei  99.9 1.9E-26 4.2E-31  234.0  20.0  178  274-565    19-202 (209)
 41 PHA02795 ankyrin-like protein;  99.9 5.7E-26 1.2E-30  247.7  19.4  205  293-546    66-290 (437)
 42 TIGR00870 trp transient-recept  99.9 7.7E-24 1.7E-28  255.3  34.6  254  239-564    15-299 (743)
 43 KOG4369 RTK signaling protein   99.9 1.6E-26 3.4E-31  259.5   8.4  306  218-572   770-1077(2131)
 44 PHA02795 ankyrin-like protein;  99.9 4.9E-25 1.1E-29  240.4  19.5  187  224-424    68-266 (437)
 45 KOG0507 CASK-interacting adapt  99.9   3E-25 6.5E-30  244.5  15.2  248  243-565     5-264 (854)
 46 KOG0502 Integral membrane anky  99.9 3.4E-25 7.4E-30  210.8   9.8  235  241-560    62-296 (296)
 47 KOG4369 RTK signaling protein   99.9 1.9E-25 4.2E-30  250.8   9.3  295  240-582   756-1056(2131)
 48 PF13962 PGG:  Domain of unknow  99.9 4.5E-24 9.7E-29  193.7  11.8  109  626-740     1-113 (113)
 49 KOG0502 Integral membrane anky  99.9 5.5E-24 1.2E-28  202.5  10.8  262  244-612    34-296 (296)
 50 PLN03192 Voltage-dependent pot  99.9 1.1E-22 2.3E-27  246.9  22.7  178  308-566   522-700 (823)
 51 PLN03192 Voltage-dependent pot  99.9 1.3E-22 2.7E-27  246.3  20.7  177  237-421   521-698 (823)
 52 TIGR00870 trp transient-recept  99.9   6E-23 1.3E-27  247.6  17.5  232  274-570    15-272 (743)
 53 KOG0507 CASK-interacting adapt  99.9 1.2E-22 2.5E-27  224.2  13.0  236  232-539    40-278 (854)
 54 KOG0505 Myosin phosphatase, re  99.9 4.9E-22 1.1E-26  213.0  12.4  230  280-564    44-273 (527)
 55 KOG0514 Ankyrin repeat protein  99.8 5.3E-21 1.2E-25  194.9  11.6  151  273-425   265-420 (452)
 56 KOG0514 Ankyrin repeat protein  99.8 5.2E-21 1.1E-25  195.0  11.5  164  232-400   259-429 (452)
 57 PHA02741 hypothetical protein;  99.8 5.2E-20 1.1E-24  180.6  15.2  130  273-403    18-157 (169)
 58 PHA02743 Viral ankyrin protein  99.8 4.9E-20 1.1E-24  180.1  14.2  142  233-379    12-162 (166)
 59 KOG0505 Myosin phosphatase, re  99.8 2.1E-20 4.6E-25  200.5  12.6  225  314-616    43-273 (527)
 60 PHA02741 hypothetical protein;  99.8 5.1E-20 1.1E-24  180.7  14.1  134  233-370    13-157 (169)
 61 PHA02743 Viral ankyrin protein  99.8 5.9E-20 1.3E-24  179.5  14.4  137  273-413    17-162 (166)
 62 PHA02736 Viral ankyrin protein  99.8 6.5E-20 1.4E-24  177.2  11.2  136  233-372     9-153 (154)
 63 PHA02884 ankyrin repeat protei  99.8   6E-19 1.3E-23  185.9  17.4  139  273-419    29-172 (300)
 64 KOG0512 Fetal globin-inducing   99.8 9.6E-19 2.1E-23  161.1  13.0  108  245-356    67-174 (228)
 65 PHA02736 Viral ankyrin protein  99.8 4.8E-19   1E-23  171.1  10.2  130  272-404    13-152 (154)
 66 PHA02884 ankyrin repeat protei  99.8 3.9E-18 8.5E-23  179.7  16.8  155  236-402    27-186 (300)
 67 KOG0512 Fetal globin-inducing   99.8 3.8E-18 8.3E-23  157.2  13.1  161  278-443    65-226 (228)
 68 KOG3676 Ca2+-permeable cation   99.7   1E-15 2.2E-20  172.3  23.6  159  243-403   103-298 (782)
 69 KOG0195 Integrin-linked kinase  99.7 3.5E-17 7.7E-22  161.9  10.2  137  231-372    24-160 (448)
 70 KOG0195 Integrin-linked kinase  99.7 2.2E-17 4.8E-22  163.3   7.0  109  273-384    31-139 (448)
 71 PF12796 Ank_2:  Ankyrin repeat  99.7 2.8E-16   6E-21  136.8  10.8   88  280-374     1-88  (89)
 72 cd00204 ANK ankyrin repeats;    99.7 1.2E-15 2.7E-20  140.3  14.6  122  273-397     4-125 (126)
 73 KOG3676 Ca2+-permeable cation   99.7 3.8E-16 8.2E-21  175.8  13.0  166  232-400   134-330 (782)
 74 cd00204 ANK ankyrin repeats;    99.6 3.7E-15   8E-20  137.1  14.8  125  236-365     2-126 (126)
 75 PF12796 Ank_2:  Ankyrin repeat  99.6   2E-15 4.3E-20  131.4  11.0   86  245-338     1-86  (89)
 76 COG0666 Arp FOG: Ankyrin repea  99.5 1.8E-13 3.9E-18  139.7  15.0  127  273-401    70-203 (235)
 77 KOG4214 Myotrophin and similar  99.5   1E-13 2.2E-18  114.9   9.7   99  244-348     5-103 (117)
 78 KOG4214 Myotrophin and similar  99.5 2.7E-13 5.9E-18  112.4   8.5  104  278-385     4-107 (117)
 79 COG0666 Arp FOG: Ankyrin repea  99.4 9.6E-13 2.1E-17  134.3  13.1  131  233-368    65-203 (235)
 80 PTZ00322 6-phosphofructo-2-kin  99.3 5.8E-12 1.3E-16  149.1  11.8  105  278-385    84-195 (664)
 81 KOG1710 MYND Zn-finger and ank  99.3   1E-11 2.2E-16  123.7  11.2  118  278-397    14-131 (396)
 82 PF13857 Ank_5:  Ankyrin repeat  99.3 2.2E-12 4.8E-17  101.4   4.6   56  503-562     1-56  (56)
 83 PF13637 Ank_4:  Ankyrin repeat  99.3 5.4E-12 1.2E-16   98.5   6.7   54  276-331     1-54  (54)
 84 PTZ00322 6-phosphofructo-2-kin  99.3 1.3E-11 2.8E-16  146.1  12.0  106  313-420    84-196 (664)
 85 KOG0515 p53-interacting protei  99.3 1.1E-11 2.4E-16  132.3   9.1  117  245-365   554-672 (752)
 86 PF13637 Ank_4:  Ankyrin repeat  99.2 1.8E-11 3.9E-16   95.5   6.5   54  311-365     1-54  (54)
 87 PF13857 Ank_5:  Ankyrin repeat  99.2 1.1E-11 2.3E-16   97.4   4.8   50  302-352     7-56  (56)
 88 KOG1710 MYND Zn-finger and ank  99.2 5.6E-11 1.2E-15  118.5  10.8  119  242-365    13-132 (396)
 89 KOG0515 p53-interacting protei  99.2 3.2E-11 6.9E-16  128.8   9.2  118  279-399   553-673 (752)
 90 KOG0782 Predicted diacylglycer  98.7   5E-08 1.1E-12  105.2   9.3  120  245-367   870-989 (1004)
 91 KOG0818 GTPase-activating prot  98.6 2.2E-07 4.9E-12   99.2   9.5   84  280-366   137-221 (669)
 92 KOG0506 Glutaminase (contains   98.5 6.8E-08 1.5E-12  102.8   5.2   94  274-369   504-597 (622)
 93 KOG0783 Uncharacterized conser  98.5 5.9E-08 1.3E-12  109.2   4.6   95  257-354    33-128 (1267)
 94 KOG0783 Uncharacterized conser  98.5 6.3E-08 1.4E-12  109.0   4.4   86  303-388    44-129 (1267)
 95 KOG0506 Glutaminase (contains   98.5 7.9E-08 1.7E-12  102.3   4.8   95  237-334   502-596 (622)
 96 KOG3609 Receptor-activated Ca2  98.5 8.4E-07 1.8E-11  101.8  12.8  122  243-374    27-160 (822)
 97 PF13606 Ank_3:  Ankyrin repeat  98.5 1.8E-07 3.8E-12   63.0   4.0   28  345-372     2-29  (30)
 98 KOG0782 Predicted diacylglycer  98.5 3.4E-07 7.3E-12   99.0   8.1  119  280-400   870-989 (1004)
 99 PF13606 Ank_3:  Ankyrin repeat  98.4 2.2E-07 4.9E-12   62.5   3.6   29  517-545     1-29  (30)
100 KOG0818 GTPase-activating prot  98.4 7.4E-07 1.6E-11   95.4   8.5   97  234-333   120-222 (669)
101 KOG0522 Ankyrin repeat protein  98.4 6.3E-07 1.4E-11   97.4   7.5   89  244-334    23-111 (560)
102 PF00023 Ank:  Ankyrin repeat H  98.4   5E-07 1.1E-11   62.5   4.1   31  345-375     2-32  (33)
103 PF00023 Ank:  Ankyrin repeat H  98.3 8.4E-07 1.8E-11   61.3   4.2   31  276-308     2-32  (33)
104 KOG0522 Ankyrin repeat protein  98.3 1.5E-06 3.3E-11   94.5   7.8   89  278-367    22-110 (560)
105 KOG3609 Receptor-activated Ca2  98.2 3.4E-06 7.4E-11   96.9   9.7  127  274-408    23-161 (822)
106 KOG0705 GTPase-activating prot  98.1 6.8E-06 1.5E-10   89.8   8.6   89  314-402   627-718 (749)
107 KOG0705 GTPase-activating prot  98.1   9E-06   2E-10   88.9   8.0   94  278-372   626-721 (749)
108 KOG0520 Uncharacterized conser  98.0 6.2E-06 1.3E-10   96.8   5.6  125  273-400   571-702 (975)
109 KOG0521 Putative GTPase activa  97.8 1.6E-05 3.4E-10   94.3   4.8   88  309-397   654-741 (785)
110 KOG0520 Uncharacterized conser  97.8 2.6E-05 5.7E-10   91.7   6.5  126  238-366   571-701 (975)
111 KOG0521 Putative GTPase activa  97.8 2.1E-05 4.5E-10   93.3   5.5   89  274-365   654-742 (785)
112 KOG0511 Ankyrin repeat protein  97.7 4.6E-05 9.9E-10   79.6   6.2   75  277-355    37-111 (516)
113 KOG0511 Ankyrin repeat protein  97.7 9.3E-05   2E-09   77.4   7.0   67  244-314    39-105 (516)
114 KOG2384 Major histocompatibili  97.6 0.00014 3.1E-09   69.4   6.6   70  301-370     2-71  (223)
115 KOG2384 Major histocompatibili  97.5 0.00022 4.7E-09   68.2   6.8   68  267-337     4-72  (223)
116 smart00248 ANK ankyrin repeats  96.0   0.011 2.5E-07   37.8   4.0   26  345-370     2-27  (30)
117 smart00248 ANK ankyrin repeats  95.8   0.014   3E-07   37.3   3.7   27  311-337     2-28  (30)
118 KOG2505 Ankyrin repeat protein  94.8   0.033 7.2E-07   60.9   4.7   64  496-563   403-471 (591)
119 KOG2505 Ankyrin repeat protein  94.1   0.066 1.4E-06   58.7   4.9   67  460-527   405-472 (591)
120 PF03158 DUF249:  Multigene fam  93.3     1.1 2.3E-05   43.5  11.1   45  488-539   147-191 (192)
121 PF03158 DUF249:  Multigene fam  92.6    0.97 2.1E-05   43.8   9.8  133  243-399    48-191 (192)
122 PF06128 Shigella_OspC:  Shigel  92.0    0.77 1.7E-05   45.7   8.3  114  279-403   156-279 (284)
123 PF06128 Shigella_OspC:  Shigel  90.5     1.5 3.3E-05   43.7   8.8  115  244-370   156-279 (284)
124 PF11929 DUF3447:  Domain of un  79.8     3.1 6.8E-05   34.6   4.5   47  486-540     8-54  (76)
125 TIGR01569 A_tha_TIGR01569 plan  77.7      66  0.0014   30.8  13.4   30  664-693    35-64  (154)
126 PF11929 DUF3447:  Domain of un  77.5     7.2 0.00016   32.4   6.0   45  244-297     9-53  (76)
127 PF06570 DUF1129:  Protein of u  74.5      41  0.0009   33.8  11.8   21  599-620    45-65  (206)
128 cd07920 Pumilio Pumilio-family  69.8      80  0.0017   33.9  13.6  126  238-365    18-149 (322)
129 KOG4591 Uncharacterized conser  59.0     5.7 0.00012   38.8   1.7   51  515-565   219-270 (280)
130 cd07920 Pumilio Pumilio-family  50.8   2E+02  0.0043   30.8  12.5  118  239-358    55-178 (322)
131 COG2322 Predicted membrane pro  50.6 1.5E+02  0.0034   28.4   9.6   26  673-698    40-65  (177)
132 KOG3359 Dolichyl-phosphate-man  49.8 1.1E+02  0.0023   36.6  10.3   23  675-697   169-191 (723)
133 PTZ00370 STEVOR; Provisional    43.0      32 0.00069   36.0   4.2   26  753-778   257-282 (296)
134 KOG2927 Membrane component of   42.8      38 0.00083   36.4   4.9   36  752-787   221-260 (372)
135 PRK11056 hypothetical protein;  42.7      47   0.001   29.9   4.7   48  728-782    11-58  (120)
136 PF07226 DUF1422:  Protein of u  37.9      65  0.0014   28.9   4.8   47  729-782    12-58  (117)
137 COG1845 CyoC Heme/copper-type   34.6 2.8E+02   0.006   28.1   9.3   34  669-703    31-64  (209)
138 TIGR01478 STEVOR variant surfa  34.5      45 0.00098   34.8   3.8   26  753-778   261-286 (295)
139 PF11137 DUF2909:  Protein of u  34.1   2E+02  0.0044   23.0   6.6   59  673-737     1-59  (63)
140 PLN03081 pentatricopeptide (PP  34.0 5.8E+02   0.013   30.8  14.1   22  277-298   263-284 (697)
141 COG4298 Uncharacterized protei  33.1      77  0.0017   26.6   4.2   50  674-742    14-63  (95)
142 PF10966 DUF2768:  Protein of u  31.4      91   0.002   24.4   4.1   35  722-756     2-39  (58)
143 KOG4026 Uncharacterized conser  30.9 5.6E+02   0.012   25.7  11.1   54  638-691    14-95  (207)
144 PF05313 Pox_P21:  Poxvirus P21  29.9 2.1E+02  0.0045   28.0   7.1   29  713-741    82-110 (189)
145 PF07344 Amastin:  Amastin surf  28.2 2.2E+02  0.0047   27.2   7.2   40  713-752    60-100 (155)
146 KOG0513 Ca2+-independent phosp  28.2      15 0.00033   42.1  -0.9   31  231-261    45-75  (503)
147 PF13903 Claudin_2:  PMP-22/EMP  26.7 4.2E+02  0.0092   24.9   9.3   33  717-749    70-102 (172)
148 PLN03218 maturation of RBCL 1;  25.6 3.3E+02  0.0071   34.8  10.0  149  243-400   512-674 (1060)
149 COG0598 CorA Mg2+ and Co2+ tra  24.5 2.5E+02  0.0055   30.3   7.8   20  721-740   265-284 (322)
150 PLN03081 pentatricopeptide (PP  24.4 1.3E+03   0.028   27.8  15.1  145  242-399   263-415 (697)
151 PF14126 DUF4293:  Domain of un  24.2 6.2E+02   0.013   24.0  10.1   14  686-699    60-73  (149)
152 KOG3462 Predicted membrane pro  23.9 3.9E+02  0.0084   23.0   6.8   14  679-692    36-49  (105)
153 cd06855 GT_GPT_euk UDP-GlcNAc:  23.8 1.5E+02  0.0033   31.4   5.8   61  725-790   218-279 (283)
154 PRK12585 putative monovalent c  22.6 5.4E+02   0.012   25.5   8.6   24  758-781    71-95  (197)
155 TIGR00267 conserved hypothetic  22.6 4.5E+02  0.0096   25.5   8.3   16  720-735   151-166 (169)
156 PF02932 Neur_chan_memb:  Neuro  22.5   4E+02  0.0086   25.6   8.5   44  732-775    39-82  (237)
157 PF12304 BCLP:  Beta-casein lik  22.2 2.9E+02  0.0062   27.1   6.6   31  674-704    38-69  (188)
158 PRK09546 zntB zinc transporter  21.9 1.6E+02  0.0034   31.9   5.6   20  721-740   267-286 (324)
159 PF10943 DUF2632:  Protein of u  21.9 2.5E+02  0.0055   26.1   5.9   56  721-778    71-126 (233)
160 PF04535 DUF588:  Domain of unk  20.6 7.1E+02   0.015   23.3  10.1   34  662-695    38-71  (149)

No 1  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=4.1e-45  Score=436.25  Aligned_cols=345  Identities=16%  Similarity=0.141  Sum_probs=267.0

Q ss_pred             CCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHH---------------------------------
Q 003814          238 CFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAA---------------------------------  284 (793)
Q Consensus       238 d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa---------------------------------  284 (793)
                      +..++||||.|+..|+.|+|+.|++++|..+... |..|.||||+|+                                 
T Consensus        38 ~~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~-~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  116 (682)
T PHA02876         38 ESIPFTAIHQALQLRQIDIVEEIIQQNPELIYIT-DHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKHK  116 (682)
T ss_pred             ccccchHHHHHHHHHhhhHHHHHHHhCcccchhh-chhhccccccccCCCCccccccccccchhhcccccHHHHHHHHHH
Confidence            4456777777777777777777777776644443 667777777555                                 


Q ss_pred             -------------------------------------HhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHH
Q 003814          285 -------------------------------------GARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIA  327 (793)
Q Consensus       285 -------------------------------------~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv  327 (793)
                                                           ..|+.+++++|++  .|++++.+|..|.||||+|+..|+.++|
T Consensus       117 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~--~Gadvn~~d~~G~TpLh~Aa~~G~~~iv  194 (682)
T PHA02876        117 LDEACIHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLLE--GGADVNAKDIYCITPIHYAAERGNAKMV  194 (682)
T ss_pred             HHHHHHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHh--CCCCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence                                                 4567778888888  7888888888888888888888888888


Q ss_pred             HHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH-----------------------------HhcCCCCCcccccC
Q 003814          328 EVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYL-----------------------------YSVTKEEDLKEEDR  378 (793)
Q Consensus       328 ~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~L-----------------------------l~~gad~n~~~~~g  378 (793)
                      ++|+++|++++ ..+.+|.||||+|+..|+.+++++|                             ++.|++++..+..|
T Consensus       195 ~~LL~~Gad~n-~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g  273 (682)
T PHA02876        195 NLLLSYGADVN-IIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCK  273 (682)
T ss_pred             HHHHHCCCCcC-ccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence            88888888876 5777788888888877777666555                             45566777788889


Q ss_pred             chHHHHHHHcCCh-hHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcC--CCcccccCCchhH
Q 003814          379 IELLVAVIDAGLY-DVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSV--PGMRAILDPKLMH  455 (793)
Q Consensus       379 ~t~Lh~A~~~g~~-eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~--~~~~~~~~~t~lh  455 (793)
                      .||||+|+..++. ++++.|++.|+++ +.+|.+|.||||+|+..|.      ..+.++.++..+  ++..+..+.||+|
T Consensus       274 ~TpLh~Aa~~~~~~~iv~lLl~~gadi-n~~d~~g~TpLh~Aa~~g~------~~~~v~~Ll~~gadin~~d~~g~TpLh  346 (682)
T PHA02876        274 NTPLHHASQAPSLSRLVPKLLERGADV-NAKNIKGETPLYLMAKNGY------DTENIRTLIMLGADVNAADRLYITPLH  346 (682)
T ss_pred             CCHHHHHHhCCCHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCC------CHHHHHHHHHcCCCCCCcccCCCcHHH
Confidence            9999999999886 6889999999885 8889999999999998874      256777777654  4556678889999


Q ss_pred             HHHHHHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHHHcCC-HHHH
Q 003814          456 LQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQ-EKIF  534 (793)
Q Consensus       456 ~a~~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~-~~iv  534 (793)
                      .++...-..-+...+...+.+++.+|..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+..++ ..++
T Consensus       347 ~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad-~~~~~~~g~T~Lh~A~~~~~~~~~v  425 (682)
T PHA02876        347 QASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGAD-IEALSQKIGTALHFALCGTNPYMSV  425 (682)
T ss_pred             HHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-ccccCCCCCchHHHHHHcCCHHHHH
Confidence            987422111222233345888888999999999999999999999999999999 78889999999999997665 5678


Q ss_pred             HHHHHcCCChhhhhhcccCCCCcHHHHHhHhCCCCcccccCCchhHhHHHhhhHHHHHHhhc-cchhHhhhcCCCCchhh
Q 003814          535 NLIYELGAHKDLIASYKDENNNNMLHLAGKLAPPDRLKIDSGAALQLRRELHWFKEIEKVVQ-PSYREAKNSEGRTPHIL  613 (793)
Q Consensus       535 ~~Ll~~gad~~~l~n~~D~~G~TpLHlAa~~~~~~~l~l~~Ga~~~~~~~l~~~~~v~~ll~-~~~~~~~n~~G~Tpl~l  613 (793)
                      ++|+++|++++.    +|.+|+||||+|+..+..                   .+.++.++. +++++.+|..|+||+++
T Consensus       426 k~Ll~~gadin~----~d~~G~TpLh~Aa~~~~~-------------------~~iv~lLl~~Gad~n~~d~~g~tpl~~  482 (682)
T PHA02876        426 KTLIDRGANVNS----KNKDLSTPLHYACKKNCK-------------------LDVIEMLLDNGADVNAINIQNQYPLLI  482 (682)
T ss_pred             HHHHhCCCCCCc----CCCCCChHHHHHHHhCCc-------------------HHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence            999999999886    999999999999987632                   112333333 45668999999999999


Q ss_pred             hhhh
Q 003814          614 FSEE  617 (793)
Q Consensus       614 a~e~  617 (793)
                      |.+.
T Consensus       483 a~~~  486 (682)
T PHA02876        483 ALEY  486 (682)
T ss_pred             HHHh
Confidence            8764


No 2  
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=2.1e-42  Score=381.40  Aligned_cols=421  Identities=16%  Similarity=0.156  Sum_probs=312.4

Q ss_pred             chhhHHhhcCC---CCcCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHH
Q 003814          218 AQPAVSLSQPG---AVSGGVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQE  294 (793)
Q Consensus       218 ~~~l~~l~~~G---~~~~~~~~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~  294 (793)
                      .++++.++..+   .........|..|.||||+|+....++.++.|++.+.+ .... |.++.+|+|+|+..|+.+..+.
T Consensus        62 d~~~~~~~~~~y~~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad-~~~~-n~~~~aplh~A~~~~~~s~L~~  139 (929)
T KOG0510|consen   62 DTELHHASARNYILSKLAISYAKDSADNTPLHAAVEYNQGDKIQVLLSYGAD-TPLR-NLNKNAPLHLAADSGNYSCLKL  139 (929)
T ss_pred             hhHHHHHHhhcchhhhhhhhhhhhcccCchhHHHhhcchHHHHHHHHhcCCC-CChh-hhhccCchhhccccchHHHHHH
Confidence            34555555555   23345566778888999999999999999999987654 3333 8899999999999999999999


Q ss_pred             HHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh-----cCC
Q 003814          295 LVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYS-----VTK  369 (793)
Q Consensus       295 LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~-----~ga  369 (793)
                      |++  +|+|+|..|+.|.||||+||..++.|..+.|++.|+++. ..|.+|.+|+|.|+++|..|+.+..+.     ++.
T Consensus       140 Ll~--~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~-K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~  216 (929)
T KOG0510|consen  140 LLD--YGADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPC-KSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQT  216 (929)
T ss_pred             HHH--hcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCC-cccCcCCchHHHHHHhcchhhhhhhhccccchhhc
Confidence            999  789999999999999999999999999999999999996 799999999999999999999999998     678


Q ss_pred             CCCcccccCchHHHHHHHcCChhHHHHHHhhCccc--------------ccccCCCCCCHHHHHHhCCCCccccchhhHH
Q 003814          370 EEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQL--------------AMARDGNGETALHVLARKPSAFASGSQLGFW  435 (793)
Q Consensus       370 d~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~~--------------~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~  435 (793)
                      .+|.-+.+|.||||.|+..|+.++++.+|+.+...              ++..|.+|.||||+||+.|+       .+.+
T Consensus       217 ~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~-------~~sv  289 (929)
T KOG0510|consen  217 HINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGG-------PESV  289 (929)
T ss_pred             ccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCC-------hhHH
Confidence            89999999999999999999999999999987643              34568999999999999997       6778


Q ss_pred             HHhhhcCCCc--ccccCCchhHHHHH----HHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCC
Q 003814          436 RRCIYSVPGM--RAILDPKLMHLQAL----ELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPN  509 (793)
Q Consensus       436 ~~ll~~~~~~--~~~~~~t~lh~a~~----~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d  509 (793)
                      +.++..+..+  +...+.+|+|.|+.    +.++.|++   ..+....+..|..|.||||.|+++||.++++.|+++|+.
T Consensus       290 d~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~---~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~  366 (929)
T KOG0510|consen  290 DNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQ---ESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGAL  366 (929)
T ss_pred             HHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHh---CcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChh
Confidence            8888766554  44567788888884    45555554   234556677788888999999988999999999998888


Q ss_pred             Ccc--cccCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhhcccCCCCcHHHHHhHhCCCCcccccCCchhHhHHHhhh
Q 003814          510 LIW--KVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLAPPDRLKIDSGAALQLRRELHW  587 (793)
Q Consensus       510 ~~~--~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n~~D~~G~TpLHlAa~~~~~~~l~l~~Ga~~~~~~~l~~  587 (793)
                      ..+  ..|.+|.||||.|+..|+..+|+.|+.+|+++..    +|+.|.+++++--....+..+.-..+...-...-+..
T Consensus       367 ~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~----~n~~g~SA~~~~~~~~~p~~~~~~~~n~c~~~~~i~~  442 (929)
T KOG0510|consen  367 FLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGV----KNKKGKSAFDTRPDRCLPVFVHRSPFNKCPTTELIEP  442 (929)
T ss_pred             hhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceee----ccccccccccccccccccHHHhhCCCCCcchhhhhcc
Confidence            655  4588889999999999999999999999988876    8888888888621111110000011100000000111


Q ss_pred             -HHHHHHhhc-cchhHhhhcCCCCchhhhhh---------hhhhhhhh-------hhhhhhhhh----hHHHHHHHHHHH
Q 003814          588 -FKEIEKVVQ-PSYREAKNSEGRTPHILFSE---------EHRRLVRE-------GEKWMKDTA----SSCMVVATLIAT  645 (793)
Q Consensus       588 -~~~v~~ll~-~~~~~~~n~~G~Tpl~la~e---------~~~~l~~e-------~~~~lk~~~----~s~~vvA~LIAT  645 (793)
                       .+.++..+. ........+++.||.+.-..         +..++...       --||.+-..    ..+.+-...++.
T Consensus       443 ~pe~~e~vlD~c~l~~~e~~~~~~~~Q~~~~~~~~~mv~~~~~eLL~HPL~ssfL~mKW~~~g~~~~~~nL~~Y~lFlv~  522 (929)
T KOG0510|consen  443 LPECFEIVLDFCILKSQERKDSPTPLQDEAAPILNIMVDKEQIELLEHPLSSSFLFMKWNRYGKYFHLNNLLIYSLFLVS  522 (929)
T ss_pred             chHHHHHHHHHHHHHHhhccCCCChhhhhhhhHHHHHhhhhHHHHhcChhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence             122222222 11223345667888763222         22222221       124554332    446677777778


Q ss_pred             HHhHhhccCCCC
Q 003814          646 VMFAAAFTVPGG  657 (793)
Q Consensus       646 VtFaA~ft~PGG  657 (793)
                      +|+=.-.+.||-
T Consensus       523 lT~Yv~~~~~~~  534 (929)
T KOG0510|consen  523 LTIYVLLIKAGM  534 (929)
T ss_pred             HHHHHHHhcccc
Confidence            888777788864


No 3  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=3.2e-42  Score=387.80  Aligned_cols=308  Identities=13%  Similarity=0.118  Sum_probs=256.5

Q ss_pred             chhhHHhhcCCCCcCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhC--cHHHHHHH
Q 003814          218 AQPAVSLSQPGAVSGGVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGAR--RTLFVQEL  295 (793)
Q Consensus       218 ~~~l~~l~~~G~~~~~~~~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g--~~eiVk~L  295 (793)
                      ...+..++..|+   ++|.+|.+|+||||+||..|+.++++.|++.+ .+++.+ |..|.||||+|+..+  ..+++++|
T Consensus        52 ~~iv~~Ll~~Ga---dvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~G-Adin~~-d~~g~TpLh~A~~~~~~~~e~v~lL  126 (446)
T PHA02946         52 ERFVEELLHRGY---SPNETDDDGNYPLHIASKINNNRIVAMLLTHG-ADPNAC-DKQHKTPLYYLSGTDDEVIERINLL  126 (446)
T ss_pred             HHHHHHHHHCcC---CCCccCCCCCCHHHHHHHcCCHHHHHHHHHCc-CCCCCC-CCCCCCHHHHHHHcCCchHHHHHHH
Confidence            345666778887   67788899999999999999999999999865 455654 899999999999876  48999999


Q ss_pred             HhcCCCCcccc-cccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCC--HHHHHHHHhcCCCCC
Q 003814          296 VNLMTPEDLAL-RNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGH--KEMIWYLYSVTKEED  372 (793)
Q Consensus       296 L~~~~gad~~~-~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~--~eiv~~Ll~~gad~n  372 (793)
                      ++  .|++++. .|..|.|||| |+..|+.+++++|+++|++++ .+|..|+||||+|+..++  .+++++|+++|++++
T Consensus       127 l~--~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~-~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin  202 (446)
T PHA02946        127 VQ--YGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEAR-IVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPS  202 (446)
T ss_pred             HH--cCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhcccccc-ccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCc
Confidence            99  8999995 6889999998 667799999999999999987 789999999999987654  689999999999999


Q ss_pred             cccccCchHHHHHHHcC--ChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccC
Q 003814          373 LKEEDRIELLVAVIDAG--LYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILD  450 (793)
Q Consensus       373 ~~~~~g~t~Lh~A~~~g--~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~  450 (793)
                      .+|.+|.||||+|+..+  +.++++.|++ ++++ +.+|..|.||||+|+..++      ..++++.++..+....   +
T Consensus       203 ~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadi-n~~d~~G~TpLh~A~~~~~------~~~~~~~Ll~~g~~~~---~  271 (446)
T PHA02946        203 KPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDV-NKQNKFGDSPLTLLIKTLS------PAHLINKLLSTSNVIT---D  271 (446)
T ss_pred             ccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCC-CCCCCCCCCHHHHHHHhCC------hHHHHHHHHhCCCCCC---C
Confidence            99999999999999986  7899999885 7775 8999999999999999875      2467777877664332   2


Q ss_pred             CchhHHHHH----HHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHH
Q 003814          451 PKLMHLQAL----ELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAV  526 (793)
Q Consensus       451 ~t~lh~a~~----~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~  526 (793)
                      ++ +|.++.    +.++.+..+     +      ...|.||||+|+++|+.++|++|+++++        .|+||||+|+
T Consensus       272 ~~-~~~a~~~~~~~~~e~l~~~-----g------~~~~~TpLh~Aa~~g~~eivk~Ll~~~~--------~~~t~L~~A~  331 (446)
T PHA02946        272 QT-VNICIFYDRDDVLEIINDK-----G------KQYDSTDFKMAVEVGSIRCVKYLLDNDI--------ICEDAMYYAV  331 (446)
T ss_pred             cH-HHHHHHcCchHHHHHHHHc-----C------cccCCCHHHHHHHcCCHHHHHHHHHCCC--------ccccHHHHHH
Confidence            33 565543    333333222     1      1357899999999999999999999875        4789999999


Q ss_pred             HcCCHHHHHHHHHcCCChhhhhhcccCCCCcHHHHHhHhCCCCc
Q 003814          527 VHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLAPPDR  570 (793)
Q Consensus       527 ~~g~~~iv~~Ll~~gad~~~l~n~~D~~G~TpLHlAa~~~~~~~  570 (793)
                      .+++.+++++|+++|+++|.    + .+|+||||+|++.++.+.
T Consensus       332 ~~~~~~~v~~Ll~~ga~~n~----~-~~G~t~l~~a~~~~~~~~  370 (446)
T PHA02946        332 LSEYETMVDYLLFNHFSVDS----V-VNGHTCMSECVRLNNPVI  370 (446)
T ss_pred             HhCHHHHHHHHHHCCCCCCC----c-cccccHHHHHHHcCCHHH
Confidence            99999999999999999884    4 589999999999988664


No 4  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=1e-41  Score=383.62  Aligned_cols=318  Identities=13%  Similarity=0.092  Sum_probs=248.2

Q ss_pred             CchHHHHHHH--cCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHH
Q 003814          241 SYAPLHLAAL--KGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFA  318 (793)
Q Consensus       241 g~T~Lh~Aa~--~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~A  318 (793)
                      +.++||.++.  .++.++++.|++.+. +++.+ |.+|.||||+||..|+.++|++|++  +|++++.+|..|.||||+|
T Consensus        37 ~~~~Lh~~~~~~~~~~~iv~~Ll~~Ga-dvn~~-d~~G~TpLh~Aa~~g~~eiv~lLL~--~GAdin~~d~~g~TpLh~A  112 (446)
T PHA02946         37 NYHILHAYCGIKGLDERFVEELLHRGY-SPNET-DDDGNYPLHIASKINNNRIVAMLLT--HGADPNACDKQHKTPLYYL  112 (446)
T ss_pred             CChHHHHHHHhcCCCHHHHHHHHHCcC-CCCcc-CCCCCCHHHHHHHcCCHHHHHHHHH--CcCCCCCCCCCCCCHHHHH
Confidence            3689998774  457889999998654 55554 8999999999999999999999999  8999999999999999999


Q ss_pred             HHhC--cHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCC--hhHH
Q 003814          319 AVSG--VTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGL--YDVA  394 (793)
Q Consensus       319 a~~g--~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~--~eiv  394 (793)
                      +..+  ..+++++|+++|++++...+..|.|||| |+..|+.+++++|+++|++++.+|..|+||||.|+..++  .+++
T Consensus       113 ~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v  191 (446)
T PHA02946        113 SGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTI  191 (446)
T ss_pred             HHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHH
Confidence            9876  4899999999999998667999999998 677899999999999999999999999999999987655  5899


Q ss_pred             HHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhh-cCCCcccccCCchhHHHHHH-----HHHHHHHH
Q 003814          395 LDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIY-SVPGMRAILDPKLMHLQALE-----LVKRLWEQ  468 (793)
Q Consensus       395 ~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~-~~~~~~~~~~~t~lh~a~~~-----~~~~Ll~~  468 (793)
                      ++|++.|+++ +.+|.+|+||||+|+..+..     ..++++.++. ...+.++..|.||||.++..     +++.|+++
T Consensus       192 ~~Ll~~Gadi-n~~d~~G~TpLH~Aa~~~~~-----~~~iv~lLl~gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~  265 (446)
T PHA02946        192 SWMMKLGISP-SKPDHDGNTPLHIVCSKTVK-----NVDIINLLLPSTDVNKQNKFGDSPLTLLIKTLSPAHLINKLLST  265 (446)
T ss_pred             HHHHHcCCCC-cccCCCCCCHHHHHHHcCCC-----cHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhC
Confidence            9999999996 89999999999999987631     2455555442 33445555666666666542     22333322


Q ss_pred             HHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhh
Q 003814          469 VLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIA  548 (793)
Q Consensus       469 ~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~  548 (793)
                           +...     .++| ++.|+..++.++++.+.++|.       ..|+||||+|+.+|+.++|++|+++|+      
T Consensus       266 -----g~~~-----~~~~-~~~a~~~~~~~~~e~l~~~g~-------~~~~TpLh~Aa~~g~~eivk~Ll~~~~------  321 (446)
T PHA02946        266 -----SNVI-----TDQT-VNICIFYDRDDVLEIINDKGK-------QYDSTDFKMAVEVGSIRCVKYLLDNDI------  321 (446)
T ss_pred             -----CCCC-----CCcH-HHHHHHcCchHHHHHHHHcCc-------ccCCCHHHHHHHcCCHHHHHHHHHCCC------
Confidence                 2221     1222 666666666666666666554       357899999999999999999999763      


Q ss_pred             hcccCCCCcHHHHHhHhCCCCcccccCCchhHhHHHhhhHHHHHHhhc-cchhHhhhcCCCCchhhhhhhhh
Q 003814          549 SYKDENNNNMLHLAGKLAPPDRLKIDSGAALQLRRELHWFKEIEKVVQ-PSYREAKNSEGRTPHILFSEEHR  619 (793)
Q Consensus       549 n~~D~~G~TpLHlAa~~~~~~~l~l~~Ga~~~~~~~l~~~~~v~~ll~-~~~~~~~n~~G~Tpl~la~e~~~  619 (793)
                           +|+||||+|+..++.+.                    ++.++. +++++.+ .+|+||+++|.+...
T Consensus       322 -----~~~t~L~~A~~~~~~~~--------------------v~~Ll~~ga~~n~~-~~G~t~l~~a~~~~~  367 (446)
T PHA02946        322 -----ICEDAMYYAVLSEYETM--------------------VDYLLFNHFSVDSV-VNGHTCMSECVRLNN  367 (446)
T ss_pred             -----ccccHHHHHHHhCHHHH--------------------HHHHHHCCCCCCCc-cccccHHHHHHHcCC
Confidence                 47899999999886432                    333332 3445665 579999999987654


No 5  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=2.1e-41  Score=404.33  Aligned_cols=403  Identities=15%  Similarity=0.113  Sum_probs=297.9

Q ss_pred             CCCCCcccccCCCCChhhhhcc-CcchhcccCCCccccccccccCCCCCC---------ccCCCCchh------------
Q 003814          148 PSSNGASGNQNSHLQPPQAISS-SIDFFEARGPDAHVVLDPSIWPMYASS---------DQVPSTSAE------------  205 (793)
Q Consensus       148 ~~s~~~~a~~~g~~~iv~~is~-~~~~v~~l~~~~~~~i~~~~~~~~~~~---------~~~~~~~~~------------  205 (793)
                      +-+..+.|+..||.++|+.|.. +.+++......+.++++.+.+.+...-         +.....+..            
T Consensus        41 ~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  120 (682)
T PHA02876         41 PFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKHKLDEA  120 (682)
T ss_pred             cchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCCCCccccccccccchhhcccccHHHHHHHHHHHHHH
Confidence            4567788999999999998875 455555555568888887775543210         000000000            


Q ss_pred             -------------hhhhhhhcCCCC------------chhhHHhhcCCCCcCCcccCCCCCchHHHHHHHcCCHHHHHHH
Q 003814          206 -------------LSRAAADESSGF------------AQPAVSLSQPGAVSGGVERNCFTSYAPLHLAALKGDWDFARNF  260 (793)
Q Consensus       206 -------------~~~~~~~~s~~~------------~~~l~~l~~~G~~~~~~~~~d~~g~T~Lh~Aa~~G~~~~v~~L  260 (793)
                                   ....+.......            .....++++.|+   ++|.+|..|+||||+||..|+.++|++|
T Consensus       121 ~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~~Ga---dvn~~d~~G~TpLh~Aa~~G~~~iv~~L  197 (682)
T PHA02876        121 CIHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLLEGGA---DVNAKDIYCITPIHYAAERGNAKMVNLL  197 (682)
T ss_pred             HHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHhCCC---CCCCCCCCCCCHHHHHHHCCCHHHHHHH
Confidence                         000000001111            112222444444   4566666777777777777777777777


Q ss_pred             HhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCC
Q 003814          261 FNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSI  340 (793)
Q Consensus       261 L~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~  340 (793)
                      ++.+. +++.. +..|.||||+|+..|+.++++.|++  .+.+++    .+.++|+.|+..++.+++++|++.|++++ .
T Consensus       198 L~~Ga-d~n~~-~~~g~t~L~~A~~~~~~~ivk~Ll~--~~~~~~----~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn-~  268 (682)
T PHA02876        198 LSYGA-DVNII-ALDDLSVLECAVDSKNIDTIKAIID--NRSNIN----KNDLSLLKAIRNEDLETSLLLYDAGFSVN-S  268 (682)
T ss_pred             HHCCC-CcCcc-CCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCC----CCcHHHHHHHHcCCHHHHHHHHHCCCCCC-C
Confidence            76543 33332 5667777777777777777777776  455443    23467777777777777777778888876 6


Q ss_pred             CCCCCCCHHHHHHHcCCH-HHHHHHHhcCCCCCcccccCchHHHHHHHcC-ChhHHHHHHhhCcccccccCCCCCCHHHH
Q 003814          341 RGNKGATPLCMAALLGHK-EMIWYLYSVTKEEDLKEEDRIELLVAVIDAG-LYDVALDLIQHHPQLAMARDGNGETALHV  418 (793)
Q Consensus       341 ~~~~G~TpLh~Aa~~g~~-eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g-~~eiv~~LL~~~~~~~~~~d~~G~TpLh~  418 (793)
                      .+..|.||||+|+..|+. +++++|++.|++++.+|.+|.||||.|+..| +.++++.|+..|+++ +..|..|.||||+
T Consensus       269 ~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadi-n~~d~~g~TpLh~  347 (682)
T PHA02876        269 IDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADV-NAADRLYITPLHQ  347 (682)
T ss_pred             CCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCC-CCcccCCCcHHHH
Confidence            788899999999999986 6999999999999999999999999999999 589999999999986 8899999999999


Q ss_pred             HHhCCCCccccchhhHHHHhhhcC--CCcccccCCchhHHHHH----HHHHHHHHHHHhcCccccccccCCCChHHHHHH
Q 003814          419 LARKPSAFASGSQLGFWRRCIYSV--PGMRAILDPKLMHLQAL----ELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAV  492 (793)
Q Consensus       419 A~~~g~~~~s~~~~~~~~~ll~~~--~~~~~~~~~t~lh~a~~----~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa  492 (793)
                      |+..+.      ..++++.++..+  ++..+..|.||+|.|+.    ++++.|++.     +++++..+..|.||||+|+
T Consensus       348 A~~~~~------~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~-----gad~~~~~~~g~T~Lh~A~  416 (682)
T PHA02876        348 ASTLDR------NKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDY-----GADIEALSQKIGTALHFAL  416 (682)
T ss_pred             HHHhCC------cHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHC-----CCCccccCCCCCchHHHHH
Confidence            998654      366777777554  45667789999999984    566666654     7788888899999999999


Q ss_pred             HcCC-HHHHHHHHHhCCCCcccccCCCCCHHHHHHHcC-CHHHHHHHHHcCCChhhhhhcccCCCCcHHHHHhHhCCCCc
Q 003814          493 ELGN-VEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHR-QEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLAPPDR  570 (793)
Q Consensus       493 ~~g~-~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g-~~~iv~~Ll~~gad~~~l~n~~D~~G~TpLHlAa~~~~~~~  570 (793)
                      ..++ .+++++|+++|++ ++.+|..|+||||+|+..+ +.+++++|+++|++++.    +|..|+||||+|+.++....
T Consensus       417 ~~~~~~~~vk~Ll~~gad-in~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~----~d~~g~tpl~~a~~~~~~v~  491 (682)
T PHA02876        417 CGTNPYMSVKTLIDRGAN-VNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNA----INIQNQYPLLIALEYHGIVN  491 (682)
T ss_pred             HcCCHHHHHHHHHhCCCC-CCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCC----CCCCCCCHHHHHHHhCCHHH
Confidence            8766 5789999999999 8999999999999999976 78999999999999986    99999999999998775545


Q ss_pred             ccccCCchh
Q 003814          571 LKIDSGAAL  579 (793)
Q Consensus       571 l~l~~Ga~~  579 (793)
                      +++..|++.
T Consensus       492 ~Ll~~~a~~  500 (682)
T PHA02876        492 ILLHYGAEL  500 (682)
T ss_pred             HHHHCCCCC
Confidence            556666654


No 6  
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=7.4e-40  Score=370.71  Aligned_cols=274  Identities=18%  Similarity=0.201  Sum_probs=227.4

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCc
Q 003814          244 PLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGV  323 (793)
Q Consensus       244 ~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~  323 (793)
                      .|+.|+..|+.+.++.|++.++..++.. +..|.||||.|+..|+.++|++|++  .|++++..+..|.||||.|+..|+
T Consensus         4 ~l~~ai~~gd~~~v~~ll~~~~~~~n~~-~~~~~tpL~~A~~~g~~~iv~~Ll~--~Ga~~n~~~~~~~t~L~~A~~~~~   80 (434)
T PHA02874          4 DLRMCIYSGDIEAIEKIIKNKGNCINIS-VDETTTPLIDAIRSGDAKIVELFIK--HGADINHINTKIPHPLLTAIKIGA   80 (434)
T ss_pred             HHHHHHhcCCHHHHHHHHHcCCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHH--CCCCCCCCCCCCCCHHHHHHHcCC
Confidence            6778888888888888887666655544 6678888888888888888888888  788888888888888888888888


Q ss_pred             HHHHHHHHhCCCCCC----------------------CCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchH
Q 003814          324 TKIAEVMVNKNRELP----------------------SIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIEL  381 (793)
Q Consensus       324 ~~iv~~Ll~~g~~~~----------------------~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~  381 (793)
                      .+++++|+++|++..                      +.++..|.||||+|+..|+.++|++|+++|++++.++..|.||
T Consensus        81 ~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tp  160 (434)
T PHA02874         81 HDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYP  160 (434)
T ss_pred             HHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCH
Confidence            888888887765431                      2467788899999999999999999999888888888888899


Q ss_pred             HHHHHHcCChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHHHHH
Q 003814          382 LVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALEL  461 (793)
Q Consensus       382 Lh~A~~~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~  461 (793)
                      ||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+                                  .++
T Consensus       161 Lh~A~~~~~~~iv~~Ll~~g~~~-n~~~~~g~tpL~~A~~~g~----------------------------------~~i  205 (434)
T PHA02874        161 IHIAIKHNFFDIIKLLLEKGAYA-NVKDNNGESPLHNAAEYGD----------------------------------YAC  205 (434)
T ss_pred             HHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCC----------------------------------HHH
Confidence            99999888889999998888875 7778888899999888876                                  366


Q ss_pred             HHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHHHcC-CHHHHHHHHHc
Q 003814          462 VKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHR-QEKIFNLIYEL  540 (793)
Q Consensus       462 ~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g-~~~iv~~Ll~~  540 (793)
                      +++|++.     +++++.++..|.||||.|+..++ +.+++|+ .+++ ++.+|..|+||||+|+..+ +.+++++|+++
T Consensus       206 v~~Ll~~-----g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~-in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~  277 (434)
T PHA02874        206 IKLLIDH-----GNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNAS-INDQDIDGSTPLHHAINPPCDIDIIDILLYH  277 (434)
T ss_pred             HHHHHhC-----CCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCC-CCCcCCCCCCHHHHHHhcCCcHHHHHHHHHC
Confidence            6766665     56677778899999999999876 5666666 5787 7889999999999999875 88999999999


Q ss_pred             CCChhhhhhcccCCCCcHHHHHhHhCC
Q 003814          541 GAHKDLIASYKDENNNNMLHLAGKLAP  567 (793)
Q Consensus       541 gad~~~l~n~~D~~G~TpLHlAa~~~~  567 (793)
                      |++++.    +|..|+||||+|++.++
T Consensus       278 gad~n~----~d~~g~TpL~~A~~~~~  300 (434)
T PHA02874        278 KADISI----KDNKGENPIDTAFKYIN  300 (434)
T ss_pred             cCCCCC----CCCCCCCHHHHHHHhCC
Confidence            999986    99999999999998774


No 7  
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.4e-39  Score=369.65  Aligned_cols=347  Identities=12%  Similarity=0.090  Sum_probs=261.2

Q ss_pred             Ccc-cCCCCCchHHHHHHHcC---CHHHHHHHHhcCCccccccCCCCCchHHHHHHHhC--cHHHHHHHHhcCCCCcccc
Q 003814          233 GVE-RNCFTSYAPLHLAALKG---DWDFARNFFNLNPEAVCVRISRNQDTALHIAAGAR--RTLFVQELVNLMTPEDLAL  306 (793)
Q Consensus       233 ~~~-~~d~~g~T~Lh~Aa~~G---~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g--~~eiVk~LL~~~~gad~~~  306 (793)
                      ++| .+|..|+||||+|+..|   +.++|+.||+. +.+++.+ |..|+||||+|+..|  +.|+|++|++...+++++.
T Consensus        32 ~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~-GAdin~k-D~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~  109 (672)
T PHA02730         32 NLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSR-GVERLCR-NNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNEL  109 (672)
T ss_pred             chhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhC-CCCCccc-CCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCccc
Confidence            344 77889999999999997   59999999975 5556665 999999999999977  7999999999433556688


Q ss_pred             cccCCChHHHHHHH--hCcHHHHHHHHh-CCCCCCCCCC----CCCCCHHHHHHHcCCHHHHHHHHhcCCCCC-------
Q 003814          307 RNKVGNTALCFAAV--SGVTKIAEVMVN-KNRELPSIRG----NKGATPLCMAALLGHKEMIWYLYSVTKEED-------  372 (793)
Q Consensus       307 ~d~~G~TpLh~Aa~--~g~~~iv~~Ll~-~g~~~~~~~~----~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n-------  372 (793)
                      .|..+.+|||.++.  +++.++|++|++ .+.+++...+    ..|.+|+++|...++.|+|++|+++|++++       
T Consensus       110 ~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~  189 (672)
T PHA02730        110 TSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSC  189 (672)
T ss_pred             ccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccc
Confidence            88889999999998  899999999997 5667653322    379999999999999999999999999995       


Q ss_pred             cccccCc-hHHHHH------HHcCChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhh-----
Q 003814          373 LKEEDRI-ELLVAV------IDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIY-----  440 (793)
Q Consensus       373 ~~~~~g~-t~Lh~A------~~~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~-----  440 (793)
                      ..+..+. |.||++      ..+++.|++++|+++|+++ +.+|.+|+||||++....+     ...++++.|+.     
T Consensus       190 ~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadI-N~kd~~G~TpLh~~~~~~~-----~~~eiv~~Li~~~~~~  263 (672)
T PHA02730        190 MYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSI-HGRDEGGSLPIQYYWSCST-----IDIEIVKLLIKDVDTC  263 (672)
T ss_pred             cccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCc-----ccHHHHHHHHhccccc
Confidence            1333444 556643      3567889999999999996 9999999999996433321     12567777776     


Q ss_pred             ---------------------------cCCCcc----------------------cccCCc-------------------
Q 003814          441 ---------------------------SVPGMR----------------------AILDPK-------------------  452 (793)
Q Consensus       441 ---------------------------~~~~~~----------------------~~~~~t-------------------  452 (793)
                                                 .+.+..                      +..+..                   
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~  343 (672)
T PHA02730        264 SVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIV  343 (672)
T ss_pred             cccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHH
Confidence                                       111110                      111111                   


Q ss_pred             --hhHHH-------HHHHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCC----HHHHHHHHHhCCC-CcccccCCC
Q 003814          453 --LMHLQ-------ALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGN----VEFLMVLIQMYPN-LIWKVDDHS  518 (793)
Q Consensus       453 --~lh~a-------~~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~----~eiv~~LL~~g~d-~~~~~d~~G  518 (793)
                        .||.-       ..++++.|+     .+|++++.. ..|.||||+|+..++    .+++++|+++|++ .++.+|..|
T Consensus       344 q~~l~~Y~~~~~~v~ieIvelLI-----s~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G  417 (672)
T PHA02730        344 QAMLINYLHYGDMVSIPILRCML-----DNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNG  417 (672)
T ss_pred             HHHHHHHHhcCCcCcHHHHHHHH-----HCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCC
Confidence              11111       123334443     447788875 789999999998875    8999999999984 378889999


Q ss_pred             CCHHHH---HHHcC---------CHHHHHHHHHcCCChhhhhhcccCCCCcHHHHHhHhCCCCcccccCCchhHhHHHhh
Q 003814          519 RSMFHI---AVVHR---------QEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLAPPDRLKIDSGAALQLRRELH  586 (793)
Q Consensus       519 ~T~Lh~---A~~~g---------~~~iv~~Ll~~gad~~~l~n~~D~~G~TpLHlAa~~~~~~~l~l~~Ga~~~~~~~l~  586 (793)
                      +||||.   |...+         ..+++++|+++|++++.    +|..|+||||+|+..++.+                 
T Consensus       418 ~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINa----kD~~G~TPLh~Aa~~~~~e-----------------  476 (672)
T PHA02730        418 RLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDM----IDNENKTLLYYAVDVNNIQ-----------------  476 (672)
T ss_pred             CchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhc----cCCCCCCHHHHHHHhCCHH-----------------
Confidence            999994   33332         23579999999999986    9999999999999987643                 


Q ss_pred             hHHHHHHhhc-cchhHhhhc-CCCCchhhhhhh
Q 003814          587 WFKEIEKVVQ-PSYREAKNS-EGRTPHILFSEE  617 (793)
Q Consensus       587 ~~~~v~~ll~-~~~~~~~n~-~G~Tpl~la~e~  617 (793)
                         .++.++. +++++.+|. .|.||++.|+..
T Consensus       477 ---ive~LI~~GAdIN~~d~~~g~TaL~~Aa~~  506 (672)
T PHA02730        477 ---FARRLLEYGASVNTTSRSIINTAIQKSSYR  506 (672)
T ss_pred             ---HHHHHHHCCCCCCCCCCcCCcCHHHHHHHh
Confidence               2333333 455688886 599999999763


No 8  
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=2e-39  Score=378.35  Aligned_cols=362  Identities=11%  Similarity=0.034  Sum_probs=273.6

Q ss_pred             hhhcCCCCchhhHHhhcCCCCcCCcccCCCCCchHHHHHHHcCCHH----HHHHHHhcCCccccccCCCCCchHHHHHHH
Q 003814          210 AADESSGFAQPAVSLSQPGAVSGGVERNCFTSYAPLHLAALKGDWD----FARNFFNLNPEAVCVRISRNQDTALHIAAG  285 (793)
Q Consensus       210 ~~~~s~~~~~~l~~l~~~G~~~~~~~~~d~~g~T~Lh~Aa~~G~~~----~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~  285 (793)
                      |.....+....+..++..|+   +++..+..|+||||+|+..|+.+    +++.|++.++. .+.  + +..+++|+|+.
T Consensus        40 ~~~~~~~~~~~v~~Ll~~ga---~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~-~n~--~-~~~~~~~~a~~  112 (661)
T PHA02917         40 LFNEHCNNVEVVKLLLDSGT---NPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGY-SNI--N-DFNIFSYMKSK  112 (661)
T ss_pred             HHhhhcCcHHHHHHHHHCCC---CccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCC-CCC--C-CcchHHHHHhh
Confidence            33333344567777778888   56788999999999999999955    45677765443 121  1 23478888999


Q ss_pred             hCcHHHHHHHHhcCCCCcccccccCCChHHHHHH--HhCcHHHHHHHHhCCCCCCCCCC---CCC-----------CCHH
Q 003814          286 ARRTLFVQELVNLMTPEDLALRNKVGNTALCFAA--VSGVTKIAEVMVNKNRELPSIRG---NKG-----------ATPL  349 (793)
Q Consensus       286 ~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa--~~g~~~iv~~Ll~~g~~~~~~~~---~~G-----------~TpL  349 (793)
                      +|+.++|++|++  +|+|++.+|.+|+||||.|+  ..|+.++|++|+++|++++ .+|   ..|           .|||
T Consensus       113 ~~~~e~vk~Ll~--~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn-~~d~~~~~g~~~~~~~~~~~~t~L  189 (661)
T PHA02917        113 NVDVDLIKVLVE--HGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVL-YEDEDDEYGYAYDDYQPRNCGTVL  189 (661)
T ss_pred             cCCHHHHHHHHH--cCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcc-ccccccccccccccccccccccHH
Confidence            999999999999  89999999999999999654  5789999999999999987 333   234           5999


Q ss_pred             HHHHH-----------cCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCCh--hHHHHHHhhCcccc---cccCCCCC
Q 003814          350 CMAAL-----------LGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLY--DVALDLIQHHPQLA---MARDGNGE  413 (793)
Q Consensus       350 h~Aa~-----------~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~--eiv~~LL~~~~~~~---~~~d~~G~  413 (793)
                      |+|+.           .++.++|++|+++|+|+|.+|.+|.||||+|+.+|+.  |+++.|++ |++..   ...|..|.
T Consensus       190 ~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~  268 (661)
T PHA02917        190 HLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCC  268 (661)
T ss_pred             HHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccc
Confidence            99986           4689999999999999999999999999999999986  79999975 76642   24567789


Q ss_pred             CHHHHHHhCCCCccc--cchhhHHHHhhhcCCCccc---------c------------cCCchhHHHH---------HHH
Q 003814          414 TALHVLARKPSAFAS--GSQLGFWRRCIYSVPGMRA---------I------------LDPKLMHLQA---------LEL  461 (793)
Q Consensus       414 TpLh~A~~~g~~~~s--~~~~~~~~~ll~~~~~~~~---------~------------~~~t~lh~a~---------~~~  461 (793)
                      +|+|+|+..++.+..  .-..++++.|+..+.....         .            .+.+++|...         .++
T Consensus       269 ~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~  348 (661)
T PHA02917        269 TRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMTFGDIDIPL  348 (661)
T ss_pred             cchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHHcCCCcHHH
Confidence            999999954322111  2267899999988754210         0            1112222221         235


Q ss_pred             HHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHH-hCCCCcccccCCCCCHHHHHHHcC-----------
Q 003814          462 VKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQ-MYPNLIWKVDDHSRSMFHIAVVHR-----------  529 (793)
Q Consensus       462 ~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~-~g~d~~~~~d~~G~T~Lh~A~~~g-----------  529 (793)
                      ++.|++.     |++++.++..|.++.    ...+.+++++||. .|++.++. +.+|+||||.|++.+           
T Consensus       349 v~~Ll~~-----GAdvn~~~~~g~~~~----~~~~~~~i~~LL~~~ga~~~~~-~~~G~TpL~~a~~~~~~~~~~~~~~~  418 (661)
T PHA02917        349 VECMLEY-----GAVVNKEAIHGYFRN----INIDSYTMKYLLKKEGGDAVNH-LDDGEIPIGHLCKSNYGCYNFYTYTY  418 (661)
T ss_pred             HHHHHHc-----CCCCCCCCccccchh----hcCCHHHHHHHHHhcCCCcccc-CCCCCChhHHHHHhcccchhhhhhhh
Confidence            5555555     778888888888754    4677889999997 58874554 557999999998543           


Q ss_pred             ------------CHHHHHHHHHcCCChhhhhhcccCCCCcHHHHHhHhCCCCcccccCCchhHhHHHhhhHHHHHHhhc-
Q 003814          530 ------------QEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLAPPDRLKIDSGAALQLRRELHWFKEIEKVVQ-  596 (793)
Q Consensus       530 ------------~~~iv~~Ll~~gad~~~l~n~~D~~G~TpLHlAa~~~~~~~l~l~~Ga~~~~~~~l~~~~~v~~ll~-  596 (793)
                                  ..+++++|+++|++++.    +|..|+||||+|+..++.+                    .++.++. 
T Consensus       419 ~~~~~~~~~~~~~~~~v~~Ll~~GAdIN~----kd~~G~TpLh~Aa~~~~~~--------------------~v~~Ll~~  474 (661)
T PHA02917        419 KKGLCDMSYACPILSTINICLPYLKDINM----IDKRGETLLHKAVRYNKQS--------------------LVSLLLES  474 (661)
T ss_pred             hhccchhhhhhhhHHHHHHHHHCCCCCCC----CCCCCcCHHHHHHHcCCHH--------------------HHHHHHHC
Confidence                        35678999999999986    9999999999999877543                    2333333 


Q ss_pred             cchhHhhhcCCCCchhhhhh
Q 003814          597 PSYREAKNSEGRTPHILFSE  616 (793)
Q Consensus       597 ~~~~~~~n~~G~Tpl~la~e  616 (793)
                      +++++.+|..|+|||++|..
T Consensus       475 GAdin~~d~~G~T~L~~A~~  494 (661)
T PHA02917        475 GSDVNIRSNNGYTCIAIAIN  494 (661)
T ss_pred             cCCCCCCCCCCCCHHHHHHH
Confidence            45668999999999999985


No 9  
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=2.9e-39  Score=373.96  Aligned_cols=328  Identities=13%  Similarity=0.040  Sum_probs=230.1

Q ss_pred             chhhHHhhcCC-CCcCCcccC-CCCCchHHHHHHH--cCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCc--HHH
Q 003814          218 AQPAVSLSQPG-AVSGGVERN-CFTSYAPLHLAAL--KGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARR--TLF  291 (793)
Q Consensus       218 ~~~l~~l~~~G-~~~~~~~~~-d~~g~T~Lh~Aa~--~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~--~ei  291 (793)
                      ...+.++++.| +   ++|.. +..|+||||.|+.  .++.+++++|++.+ .+++.+ |..|.||||+|++.|+  .++
T Consensus       155 leiVk~LLe~G~A---DIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~G-ADVN~k-D~~G~TPLH~Aa~~g~~~~eI  229 (764)
T PHA02716        155 LDLIKYMVDVGIV---NLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNG-VNVNLQ-NNHLITPLHTYLITGNVCASV  229 (764)
T ss_pred             HHHHHHHHHCCCC---CcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcC-CCCCCC-CCCCCCHHHHHHHcCCCCHHH
Confidence            45666788888 6   56666 8889999999875  46889999999765 456654 8999999999999995  599


Q ss_pred             HHHHHhcCCCCcccccccCCChHHHHHH-------------------------------------HhCcHHHHHHHHhCC
Q 003814          292 VQELVNLMTPEDLALRNKVGNTALCFAA-------------------------------------VSGVTKIAEVMVNKN  334 (793)
Q Consensus       292 Vk~LL~~~~gad~~~~d~~G~TpLh~Aa-------------------------------------~~g~~~iv~~Ll~~g  334 (793)
                      |++|++  .|++++.+|..|+||||+|+                                     +.|+.+++++|+++|
T Consensus       230 VklLLe--~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~G  307 (764)
T PHA02716        230 IKKIIE--LGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPG  307 (764)
T ss_pred             HHHHHH--cCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCC
Confidence            999999  89999999999999999763                                     446677788888888


Q ss_pred             CCCCCCCCCCCCCHHHHHHH--cCCHHHHHHHHhcCCCCCcccccCchHHHHHHH--------------cCChhHHHHHH
Q 003814          335 RELPSIRGNKGATPLCMAAL--LGHKEMIWYLYSVTKEEDLKEEDRIELLVAVID--------------AGLYDVALDLI  398 (793)
Q Consensus       335 ~~~~~~~~~~G~TpLh~Aa~--~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~--------------~g~~eiv~~LL  398 (793)
                      ++++ .+|..|+||||+|+.  .++.+++++|+++|++++.+|..|.||||+|+.              .++.+++++|+
T Consensus       308 AdIN-~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL  386 (764)
T PHA02716        308 VKLH-YKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLI  386 (764)
T ss_pred             Ccee-ccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHH
Confidence            8876 677788888887654  356788888888888888888888888887764              25678888888


Q ss_pred             hhCcccccccCCCCCCHHHHH-HhCCCCccccchhhHHHHhhhcCCCcc----------cccCCch--hHHHHHHH----
Q 003814          399 QHHPQLAMARDGNGETALHVL-ARKPSAFASGSQLGFWRRCIYSVPGMR----------AILDPKL--MHLQALEL----  461 (793)
Q Consensus       399 ~~~~~~~~~~d~~G~TpLh~A-~~~g~~~~s~~~~~~~~~ll~~~~~~~----------~~~~~t~--lh~a~~~~----  461 (793)
                      ++|+++ +.+|..|+||||.+ +...+    ....++++.|+..+....          ...+.++  +|.++.+.    
T Consensus       387 ~~GADI-n~kn~~G~TPLh~y~~~a~n----~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~  461 (764)
T PHA02716        387 SLGADI-TAVNCLGYTPLTSYICTAQN----YMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPT  461 (764)
T ss_pred             HCCCCC-CCcCCCCCChHHHHHHHHHh----cChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcch
Confidence            888775 77788888888732 21110    113566676665432110          0111222  23322110    


Q ss_pred             HHHH-------------HHHHHhcCccccccccCCCChHHHHHHHcCCH-----HHHHHHHHhCCCCcccccCCCCCHHH
Q 003814          462 VKRL-------------WEQVLLLDDSKIGELLRKPSRLLFTAVELGNV-----EFLMVLIQMYPNLIWKVDDHSRSMFH  523 (793)
Q Consensus       462 ~~~L-------------l~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~-----eiv~~LL~~g~d~~~~~d~~G~T~Lh  523 (793)
                      ...+             +.........+++..|..|+||||+|+..|+.     |++++|++.|++ ++.+|.+|+||||
T Consensus       462 ~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GAD-IN~~d~~G~TPLh  540 (764)
T PHA02716        462 DLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYN-INIPTKNGVTPLM  540 (764)
T ss_pred             hhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCC-CcccCCCCCCHHH
Confidence            0000             01111223445666677788888888887765     445888888888 7778888888888


Q ss_pred             HHHHcCCH-----HHHHHHHHcCCChhhhhhcccCCCCcHHHHHhHhCCCC
Q 003814          524 IAVVHRQE-----KIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLAPPD  569 (793)
Q Consensus       524 ~A~~~g~~-----~iv~~Ll~~gad~~~l~n~~D~~G~TpLHlAa~~~~~~  569 (793)
                      +|+++|+.     ++|+.|+++|++++.+          .|++|...++.+
T Consensus       541 ~A~~~g~~~~~~~eIvk~LL~~ga~~~~~----------~l~~~~~~~~~~  581 (764)
T PHA02716        541 LTMRNNRLSGHQWYIVKNILDKRPNVDIV----------IIFLDKCYANGK  581 (764)
T ss_pred             HHHHcCCccccHHHHHHHHHhcCCCcchH----------HHHHHhhhhhhH
Confidence            88887765     7888888888877652          367776555443


No 10 
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=3.1e-40  Score=364.37  Aligned_cols=325  Identities=19%  Similarity=0.164  Sum_probs=277.1

Q ss_pred             cccCCCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCCh
Q 003814          234 VERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNT  313 (793)
Q Consensus       234 ~~~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~T  313 (793)
                      ....+..|+|++|.|+..+..      +++.. ...+ .|..|+||||+|+.....+.|+.|++  .|++++..|.++.+
T Consensus        54 ~~~~~~~gd~~~~~~~~~~y~------~~~~~-~~~a-~D~~~n~~l~~a~~~~~~~~i~~Lls--~gad~~~~n~~~~a  123 (929)
T KOG0510|consen   54 TPGKRAFGDTELHHASARNYI------LSKLA-ISYA-KDSADNTPLHAAVEYNQGDKIQVLLS--YGADTPLRNLNKNA  123 (929)
T ss_pred             cchhhhhchhHHHHHHhhcch------hhhhh-hhhh-hhcccCchhHHHhhcchHHHHHHHHh--cCCCCChhhhhccC
Confidence            445667789999999998865      21111 1222 38899999999999999999999999  89999999999999


Q ss_pred             HHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCChhH
Q 003814          314 ALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDV  393 (793)
Q Consensus       314 pLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~ei  393 (793)
                      |+|+|+..|+.++.+.|+++|++++ ..|..|.||||+||..++.|..+.|++.|+++...|.+|++|+|.|++.|..|.
T Consensus       124 plh~A~~~~~~s~L~~Ll~~~~dvn-l~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~  202 (929)
T KOG0510|consen  124 PLHLAADSGNYSCLKLLLDYGADVN-LEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKEC  202 (929)
T ss_pred             chhhccccchHHHHHHHHHhcCCcc-ccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhh
Confidence            9999999999999999999999997 899999999999999999998899999999999999999999999999999999


Q ss_pred             HHHHHh-----hCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCC-----------------CcccccCC
Q 003814          394 ALDLIQ-----HHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVP-----------------GMRAILDP  451 (793)
Q Consensus       394 v~~LL~-----~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~-----------------~~~~~~~~  451 (793)
                      .+..+.     ++.. ++..+.+|.||||.|+..|+       .+.++.++..+.                 +..+..|.
T Consensus       203 mEi~l~~~g~~r~~~-in~~~n~~~~pLhlAve~g~-------~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~  274 (929)
T KOG0510|consen  203 MEIFLPEHGYERQTH-INFDNNEKATPLHLAVEGGD-------IEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGC  274 (929)
T ss_pred             hhhhhccccchhhcc-cccccCCCCcchhhhhhcCC-------HHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCC
Confidence            999998     4444 47888999999999999987       788888886543                 34456789


Q ss_pred             chhHHHHHHHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHH-hCCCCcccccCCCCCHHHHHHHcCC
Q 003814          452 KLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQ-MYPNLIWKVDDHSRSMFHIAVVHRQ  530 (793)
Q Consensus       452 t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~-~g~d~~~~~d~~G~T~Lh~A~~~g~  530 (793)
                      ||||+++.+.-...++.+ ...+++++.++.++.||||.||..|+.+.|+.||+ .+.-..+..|..|+||||+|+++||
T Consensus       275 tpLH~a~r~G~~~svd~L-l~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH  353 (929)
T KOG0510|consen  275 TPLHYAARQGGPESVDNL-LGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGH  353 (929)
T ss_pred             chHHHHHHcCChhHHHHH-HHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCH
Confidence            999999965444443332 23488899999999999999999999999999999 6666788889999999999999999


Q ss_pred             HHHHHHHHHcCCChhhhhhcccCCCCcHHHHHhHhCCCCc--ccccCCchh
Q 003814          531 EKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLAPPDR--LKIDSGAAL  579 (793)
Q Consensus       531 ~~iv~~Ll~~gad~~~l~n~~D~~G~TpLHlAa~~~~~~~--l~l~~Ga~~  579 (793)
                      .+++++|+++|++.... .+.|.+|+||||+|++.|+...  +++.+|+++
T Consensus       354 ~~v~qlLl~~GA~~~~~-~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I  403 (929)
T KOG0510|consen  354 DRVVQLLLNKGALFLNM-SEADSDGNTALHLAAKYGNTSAVQKLISHGADI  403 (929)
T ss_pred             HHHHHHHHhcChhhhcc-cccccCCchhhhHHHHhccHHHHHHHHHcCCce
Confidence            99999999999987621 2459999999999999998753  445555554


No 11 
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=6.1e-39  Score=367.77  Aligned_cols=276  Identities=15%  Similarity=0.141  Sum_probs=184.6

Q ss_pred             HHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhC---cHHHHHHHHhcCCCCcccccccCCChHHHHHHHhC
Q 003814          246 HLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGAR---RTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSG  322 (793)
Q Consensus       246 h~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g---~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g  322 (793)
                      ..++..++.++++.|++.+. +++.+ +..|.||||+|+..|   +.+++++|++  .|++++.+|..|.||||+|+..|
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga-~vn~~-~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~--~Gadin~~~~~g~TpLh~A~~~~   94 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGA-DVNFR-GEYGKTPLHLYLHYSSEKVKDIVRLLLE--AGADVNAPERCGFTPLHLYLYNA   94 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCC-CcccC-CCCCCCHHHHHHHhcCCChHHHHHHHHH--CCCCCCCCCCCCCCHHHHHHHcC
Confidence            44556667777777775533 34443 666777777777776   7777777777  67777777777777777777777


Q ss_pred             -cHHHHHHHHhCCCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcC--ChhHHHHH
Q 003814          323 -VTKIAEVMVNKNRELPSIRGNKGATPLCMAA--LLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAG--LYDVALDL  397 (793)
Q Consensus       323 -~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa--~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g--~~eiv~~L  397 (793)
                       +.+++++|+++|++++ .++..|.||||+|+  ..++.+++++|+++|++++..+..|.||||+|+..+  +.++++.|
T Consensus        95 ~~~~iv~lLl~~ga~in-~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~L  173 (471)
T PHA03095         95 TTLDVIKLLIKAGADVN-AKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLL  173 (471)
T ss_pred             CcHHHHHHHHHcCCCCC-CCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHH
Confidence             4777777777777765 56667777777777  445667777777777777777777777777766654  45677777


Q ss_pred             HhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHHHHHHhcCcccc
Q 003814          398 IQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKI  477 (793)
Q Consensus       398 L~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~~  477 (793)
                      +++|++. +..|..|+||||+++.....     .                           .++++.|++.     ++++
T Consensus       174 l~~g~~~-~~~d~~g~t~Lh~~~~~~~~-----~---------------------------~~i~~~Ll~~-----g~~~  215 (471)
T PHA03095        174 IDAGADV-YAVDDRFRSLLHHHLQSFKP-----R---------------------------ARIVRELIRA-----GCDP  215 (471)
T ss_pred             HHcCCCC-cccCCCCCCHHHHHHHHCCC-----c---------------------------HHHHHHHHHc-----CCCC
Confidence            7777765 34467777777777654321     0                           1334444433     5556


Q ss_pred             ccccCCCChHHHHHHHcCCH--HHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhhcccCCC
Q 003814          478 GELLRKPSRLLFTAVELGNV--EFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENN  555 (793)
Q Consensus       478 ~~~~~~g~t~Lh~Aa~~g~~--eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n~~D~~G  555 (793)
                      +.+|..|.||||+|+..|+.  .+++.|++.|++ ++.+|..|+||||+|+..|+.+++++|+++|+++++    +|.+|
T Consensus       216 ~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~d-in~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~----~~~~g  290 (471)
T PHA03095        216 AATDMLGNTPLHSMATGSSCKRSLVLPLLIAGIS-INARNRYGQTPLHYAAVFNNPRACRRLIALGADINA----VSSDG  290 (471)
T ss_pred             cccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc----cCCCC
Confidence            66666777777777776653  466667777776 666677777777777777777777777777777664    67777


Q ss_pred             CcHHHHHhHhCCCC
Q 003814          556 NNMLHLAGKLAPPD  569 (793)
Q Consensus       556 ~TpLHlAa~~~~~~  569 (793)
                      +||||+|+..++.+
T Consensus       291 ~tpl~~A~~~~~~~  304 (471)
T PHA03095        291 NTPLSLMVRNNNGR  304 (471)
T ss_pred             CCHHHHHHHhCCHH
Confidence            77777777766654


No 12 
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=3.7e-39  Score=373.09  Aligned_cols=338  Identities=13%  Similarity=0.080  Sum_probs=255.2

Q ss_pred             cccCCCCCchHHHHH-----HHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHh--CcHHHHHHHHhcCCCCcccc
Q 003814          234 VERNCFTSYAPLHLA-----ALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGA--RRTLFVQELVNLMTPEDLAL  306 (793)
Q Consensus       234 ~~~~d~~g~T~Lh~A-----a~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~--g~~eiVk~LL~~~~gad~~~  306 (793)
                      .+..+..+..+++..     .+.++.+++++|++.+..+++.+.|..|.||||.|+..  ++.++|++|++  +|++++.
T Consensus       130 ~~~~~~~d~~~~~~y~~al~~~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe--~GADVN~  207 (764)
T PHA02716        130 FDIPNNGDMDILYTYFNSPNTRGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCN--NGVNVNL  207 (764)
T ss_pred             hcCCCcccchHHHHHHhhhcccCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHH--cCCCCCC
Confidence            334433445565554     35689999999998763556654478899999998754  67999999999  8999999


Q ss_pred             cccCCChHHHHHHHhCc--HHHHHHHHhCCCCCCCCCCCCCCCHHHHH--------------------------------
Q 003814          307 RNKVGNTALCFAAVSGV--TKIAEVMVNKNRELPSIRGNKGATPLCMA--------------------------------  352 (793)
Q Consensus       307 ~d~~G~TpLh~Aa~~g~--~~iv~~Ll~~g~~~~~~~~~~G~TpLh~A--------------------------------  352 (793)
                      +|..|.||||+|++.|+  .++|++|+++|++++ .++..|+||||.|                                
T Consensus       208 kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN-~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~  286 (764)
T PHA02716        208 QNNHLITPLHTYLITGNVCASVIKKIIELGGDMD-MKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILH  286 (764)
T ss_pred             CCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhH
Confidence            99999999999999995  599999999999997 7899999999975                                


Q ss_pred             -----HHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHH--cCChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCC
Q 003814          353 -----ALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVID--AGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSA  425 (793)
Q Consensus       353 -----a~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~--~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~  425 (793)
                           ++.|+.+++++|+++|++++.+|.+|+||||+|+.  .++.+++++|+++|+++ +.+|..|+||||+|+.....
T Consensus       287 ~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADI-N~kD~~G~TPLH~A~~~lav  365 (764)
T PHA02716        287 SYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDL-NEPDNIGNTVLHTYLSMLSV  365 (764)
T ss_pred             HHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCC-ccCCCCCCCHHHHHHHhhhh
Confidence                 45588999999999999999999999999998764  46789999999999986 89999999999998753110


Q ss_pred             c-------cccchhhHHHHhhhcCC--CcccccCCchhHHH---H-----HHHHHHHHHHHHhcC---c---cccccccC
Q 003814          426 F-------ASGSQLGFWRRCIYSVP--GMRAILDPKLMHLQ---A-----LELVKRLWEQVLLLD---D---SKIGELLR  482 (793)
Q Consensus       426 ~-------~s~~~~~~~~~ll~~~~--~~~~~~~~t~lh~a---~-----~~~~~~Ll~~~l~~~---~---~~~~~~~~  482 (793)
                      .       ......++++.|+..+.  +..+..|.||||.+   +     .++++.|++......   .   ...+..+.
T Consensus       366 ~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~  445 (764)
T PHA02716        366 VNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDD  445 (764)
T ss_pred             hccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCc
Confidence            0       01135789999997765  45667899999942   1     466777776532111   0   00112222


Q ss_pred             CCChHHHHHHHcCCHH------------------HHHHHHHhCCCCcccccCCCCCHHHHHHHcCCH-----HHHHHHHH
Q 003814          483 KPSRLLFTAVELGNVE------------------FLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQE-----KIFNLIYE  539 (793)
Q Consensus       483 ~g~t~Lh~Aa~~g~~e------------------iv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~-----~iv~~Ll~  539 (793)
                      .+.. +|.++..++.+                  ++..++..+.+ ++..|..|+||||+|+..|+.     +++++|++
T Consensus       446 ~~~~-lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~n-vN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~  523 (764)
T PHA02716        446 TPCI-IHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYN-NAVCETSGMTPLHVSIISHTNANIVMDSFVYLLS  523 (764)
T ss_pred             chhh-HHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhcc-ccccCCCCCCHHHHHHHcCCccchhHHHHHHHHh
Confidence            3333 45555544433                  22333444555 677899999999999999876     45699999


Q ss_pred             cCCChhhhhhcccCCCCcHHHHHhHhCCC-----C--cccccCCchhHh
Q 003814          540 LGAHKDLIASYKDENNNNMLHLAGKLAPP-----D--RLKIDSGAALQL  581 (793)
Q Consensus       540 ~gad~~~l~n~~D~~G~TpLHlAa~~~~~-----~--~l~l~~Ga~~~~  581 (793)
                      .|+++|.    +|++|+||||+|+++|+.     +  .++++.|+.++.
T Consensus       524 ~GADIN~----~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~~  568 (764)
T PHA02716        524 IQYNINI----PTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDI  568 (764)
T ss_pred             CCCCCcc----cCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcch
Confidence            9999986    999999999999999975     2  244566665543


No 13 
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=4.9e-38  Score=355.83  Aligned_cols=284  Identities=16%  Similarity=0.156  Sum_probs=246.5

Q ss_pred             CcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcC-------------
Q 003814          233 GVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLM-------------  299 (793)
Q Consensus       233 ~~~~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~-------------  299 (793)
                      .++..+.+|.||||.|+..|+.++|++|++.+. +++.. +..|.||||.|+..|+.+++++|++..             
T Consensus        27 ~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga-~~n~~-~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~  104 (434)
T PHA02874         27 CINISVDETTTPLIDAIRSGDAKIVELFIKHGA-DINHI-NTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEK  104 (434)
T ss_pred             CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCH
Confidence            456677889999999999999999999998665 44443 788999999999999999999999821             


Q ss_pred             --------CCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC
Q 003814          300 --------TPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEE  371 (793)
Q Consensus       300 --------~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~  371 (793)
                              .|++++.+|..|.||||+|+..|+.++|++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|+++
T Consensus       105 ~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n-~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~  183 (434)
T PHA02874        105 DMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVN-IEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYA  183 (434)
T ss_pred             HHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC
Confidence                    235677889999999999999999999999999999997 78999999999999999999999999999999


Q ss_pred             CcccccCchHHHHHHHcCChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCC
Q 003814          372 DLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDP  451 (793)
Q Consensus       372 n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~  451 (793)
                      +..+..|.||||.|+..|+.+++++|++.++++ +.++..|.||||.|+..+.                           
T Consensus       184 n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i-~~~~~~g~TpL~~A~~~~~---------------------------  235 (434)
T PHA02874        184 NVKDNNGESPLHNAAEYGDYACIKLLIDHGNHI-MNKCKNGFTPLHNAIIHNR---------------------------  235 (434)
T ss_pred             CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-cCCCCCCCCHHHHHHHCCh---------------------------
Confidence            999999999999999999999999999999986 7888999999999998753                           


Q ss_pred             chhHHHHHHHHHHHHHHHHhcCccccccccCCCChHHHHHHHcC-CHHHHHHHHHhCCCCcccccCCCCCHHHHHHHcC-
Q 003814          452 KLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELG-NVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHR-  529 (793)
Q Consensus       452 t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g-~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g-  529 (793)
                              +.+..|+      .+.+++.++..|.||||+|+..+ +.+++++|+++|++ ++.+|..|+||||+|+..+ 
T Consensus       236 --------~~i~~Ll------~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad-~n~~d~~g~TpL~~A~~~~~  300 (434)
T PHA02874        236 --------SAIELLI------NNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKAD-ISIKDNKGENPIDTAFKYIN  300 (434)
T ss_pred             --------HHHHHHH------cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHhCC
Confidence                    2333332      36778888999999999999976 89999999999999 8999999999999999987 


Q ss_pred             CHHHHHHHHHcCCChhhhhhcccCCC-CcHHHHHhHhC
Q 003814          530 QEKIFNLIYELGAHKDLIASYKDENN-NNMLHLAGKLA  566 (793)
Q Consensus       530 ~~~iv~~Ll~~gad~~~l~n~~D~~G-~TpLHlAa~~~  566 (793)
                      +.++++.|++.+..++-    .+..+ .+++..+....
T Consensus       301 ~~~~ik~ll~~~~~~~~----~~~~~~~~~~~~~~i~~  334 (434)
T PHA02874        301 KDPVIKDIIANAVLIKE----ADKLKDSDFLEHIEIKD  334 (434)
T ss_pred             ccHHHHHHHHhcCchhh----ccccchhHHHHHHHHhc
Confidence            77899999999887653    34434 55666655443


No 14 
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=9.5e-38  Score=357.91  Aligned_cols=282  Identities=20%  Similarity=0.157  Sum_probs=252.4

Q ss_pred             chhhHHhhcCCCCcCCcccCCCCCchHHHHHHHcC---CHHHHHHHHhcCCccccccCCCCCchHHHHHHHhC-cHHHHH
Q 003814          218 AQPAVSLSQPGAVSGGVERNCFTSYAPLHLAALKG---DWDFARNFFNLNPEAVCVRISRNQDTALHIAAGAR-RTLFVQ  293 (793)
Q Consensus       218 ~~~l~~l~~~G~~~~~~~~~d~~g~T~Lh~Aa~~G---~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g-~~eiVk  293 (793)
                      ...+..+++.|+   +++..+..|.||||+|+..|   +.++++.|++.+. +++.+ +..|.||||+|+..| +.++++
T Consensus        27 ~~~v~~Ll~~ga---~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Ga-din~~-~~~g~TpLh~A~~~~~~~~iv~  101 (471)
T PHA03095         27 VEEVRRLLAAGA---DVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGA-DVNAP-ERCGFTPLHLYLYNATTLDVIK  101 (471)
T ss_pred             HHHHHHHHHcCC---CcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCC-CCCCC-CCCCCCHHHHHHHcCCcHHHHH
Confidence            456677888888   57788889999999999999   9999999997654 55555 789999999999999 599999


Q ss_pred             HHHhcCCCCcccccccCCChHHHHHH--HhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHhcCC
Q 003814          294 ELVNLMTPEDLALRNKVGNTALCFAA--VSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLG--HKEMIWYLYSVTK  369 (793)
Q Consensus       294 ~LL~~~~gad~~~~d~~G~TpLh~Aa--~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g--~~eiv~~Ll~~ga  369 (793)
                      +|++  +|++++.+|..|+||||+|+  ..++.+++++|+++|++++ .+|..|.||||+|+..+  +.+++++|+++|+
T Consensus       102 lLl~--~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~-~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~  178 (471)
T PHA03095        102 LLIK--AGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVN-ALDLYGMTPLAVLLKSRNANVELLRLLIDAGA  178 (471)
T ss_pred             HHHH--cCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCC
Confidence            9999  89999999999999999999  5568999999999999997 78999999999999876  6899999999999


Q ss_pred             CCCcccccCchHHHHHHHc--CChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCccc
Q 003814          370 EEDLKEEDRIELLVAVIDA--GLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRA  447 (793)
Q Consensus       370 d~n~~~~~g~t~Lh~A~~~--g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~  447 (793)
                      +++..+..|.||||.|+..  ++.++++.|++.|++. +.+|..|+||||+|+..|+..                     
T Consensus       179 ~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~-~~~d~~g~tpLh~Aa~~~~~~---------------------  236 (471)
T PHA03095        179 DVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDP-AATDMLGNTPLHSMATGSSCK---------------------  236 (471)
T ss_pred             CCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCC-cccCCCCCCHHHHHHhcCCch---------------------
Confidence            9999999999999999875  7789999999999996 899999999999999987520                     


Q ss_pred             ccCCchhHHHHHHHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHHH
Q 003814          448 ILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVV  527 (793)
Q Consensus       448 ~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~  527 (793)
                                 ...++.+++     .+.+++.+|..|.||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+.
T Consensus       237 -----------~~~v~~ll~-----~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad-~n~~~~~g~tpl~~A~~  299 (471)
T PHA03095        237 -----------RSLVLPLLI-----AGISINARNRYGQTPLHYAAVFNNPRACRRLIALGAD-INAVSSDGNTPLSLMVR  299 (471)
T ss_pred             -----------HHHHHHHHH-----cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHH
Confidence                       123344443     3778889999999999999999999999999999999 89999999999999999


Q ss_pred             cCCHHHHHHHHHcCCChhh
Q 003814          528 HRQEKIFNLIYELGAHKDL  546 (793)
Q Consensus       528 ~g~~~iv~~Ll~~gad~~~  546 (793)
                      .|+.++++.|++++++++.
T Consensus       300 ~~~~~~v~~LL~~~~~~~~  318 (471)
T PHA03095        300 NNNGRAVRAALAKNPSAET  318 (471)
T ss_pred             hCCHHHHHHHHHhCCCHHH
Confidence            9999999999999999875


No 15 
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=5.6e-38  Score=360.63  Aligned_cols=280  Identities=20%  Similarity=0.192  Sum_probs=247.0

Q ss_pred             hhHHhhcCCCCcCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHH-----HHHhCcHHHHHH
Q 003814          220 PAVSLSQPGAVSGGVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHI-----AAGARRTLFVQE  294 (793)
Q Consensus       220 ~l~~l~~~G~~~~~~~~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~-----Aa~~g~~eiVk~  294 (793)
                      .+..+...+.   ..+..+.++.||||.|+..|+.++++.|++.+. +++.. +..|.||||+     |+..|+.++++.
T Consensus        17 ~~~~~~~~~~---~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~-~~~~~-~~~~~t~L~~~~~~~a~~~~~~~iv~~   91 (480)
T PHA03100         17 NIKYIIMEDD---LNDYSYKKPVLPLYLAKEARNIDVVKILLDNGA-DINSS-TKNNSTPLHYLSNIKYNLTDVKEIVKL   91 (480)
T ss_pred             HHHHHHhcCc---cchhhhcccchhhhhhhccCCHHHHHHHHHcCC-CCCCc-cccCcCHHHHHHHHHHHhhchHHHHHH
Confidence            4555665554   455678889999999999999999999998765 44443 7889999999     999999999999


Q ss_pred             HHhcCCCCcccccccCCChHHHHHH--HhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHhcCCC
Q 003814          295 LVNLMTPEDLALRNKVGNTALCFAA--VSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLG--HKEMIWYLYSVTKE  370 (793)
Q Consensus       295 LL~~~~gad~~~~d~~G~TpLh~Aa--~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g--~~eiv~~Ll~~gad  370 (793)
                      |++  .|++++..|..|.||||+|+  ..|+.+++++|+++|++++ ..+..|.||||+|+..|  +.+++++|+++|++
T Consensus        92 Ll~--~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~d  168 (480)
T PHA03100         92 LLE--YGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVN-IKNSDGENLLHLYLESNKIDLKILKLLIDKGVD  168 (480)
T ss_pred             HHH--CCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCC-ccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCC
Confidence            999  89999999999999999999  9999999999999999987 78999999999999999  99999999999999


Q ss_pred             CCcccccCchHHHHHHHcCChhHHHHHHhhCcccccccCCCC------CCHHHHHHhCCCCccccchhhHHHHhhhcCCC
Q 003814          371 EDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNG------ETALHVLARKPSAFASGSQLGFWRRCIYSVPG  444 (793)
Q Consensus       371 ~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~~~~~~d~~G------~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~  444 (793)
                      ++.++..|.||||+|+..|+.+++++|+++|++. +..+..|      .||||.|+..++.                   
T Consensus       169 in~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~-~~~~~~~~~~~~~~t~l~~a~~~~~~-------------------  228 (480)
T PHA03100        169 INAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADI-NAGDIETLLFTIFETPLHIAACYNEI-------------------  228 (480)
T ss_pred             cccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCc-cCCCCCCCcHHHHHhHHHHHHHhCcC-------------------
Confidence            9999999999999999999999999999999986 7788888      8888888887651                   


Q ss_pred             cccccCCchhHHHHHHHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHH
Q 003814          445 MRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHI  524 (793)
Q Consensus       445 ~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~  524 (793)
                                   ..++++.|++.     +.+++.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+
T Consensus       229 -------------~~~iv~~Ll~~-----g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad-~n~~d~~g~tpl~~  289 (480)
T PHA03100        229 -------------TLEVVNYLLSY-----GVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGAN-PNLVNKYGDTPLHI  289 (480)
T ss_pred             -------------cHHHHHHHHHc-----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCcHHHH
Confidence                         02566666654     567777888899999999999999999999999998 88889999999999


Q ss_pred             HHHcCCHHHHHHHHHcCCChhh
Q 003814          525 AVVHRQEKIFNLIYELGAHKDL  546 (793)
Q Consensus       525 A~~~g~~~iv~~Ll~~gad~~~  546 (793)
                      |+..++.+++++|+++|++++.
T Consensus       290 A~~~~~~~iv~~Ll~~g~~i~~  311 (480)
T PHA03100        290 AILNNNKEIFKLLLNNGPSIKT  311 (480)
T ss_pred             HHHhCCHHHHHHHHhcCCCHHH
Confidence            9999999999999999998875


No 16 
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=4.7e-38  Score=361.26  Aligned_cols=280  Identities=19%  Similarity=0.224  Sum_probs=251.3

Q ss_pred             CCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHH-----HHHhCcHHH
Q 003814          252 GDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCF-----AAVSGVTKI  326 (793)
Q Consensus       252 G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~-----Aa~~g~~~i  326 (793)
                      ...++++++++.+ .... ..+..+.||||.|+..|+.++|++|++  .|++++..+..|.||||+     |+..|+.++
T Consensus        13 ~~~~~~~~~~~~~-~~~~-~~~~~~~t~L~~A~~~~~~~ivk~Ll~--~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~i   88 (480)
T PHA03100         13 IKVKNIKYIIMED-DLND-YSYKKPVLPLYLAKEARNIDVVKILLD--NGADINSSTKNNSTPLHYLSNIKYNLTDVKEI   88 (480)
T ss_pred             HHHHHHHHHHhcC-ccch-hhhcccchhhhhhhccCCHHHHHHHHH--cCCCCCCccccCcCHHHHHHHHHHHhhchHHH
Confidence            4457788888543 3333 347899999999999999999999999  899999999999999999     999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcC--ChhHHHHHHhhCc
Q 003814          327 AEVMVNKNRELPSIRGNKGATPLCMAA--LLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAG--LYDVALDLIQHHP  402 (793)
Q Consensus       327 v~~Ll~~g~~~~~~~~~~G~TpLh~Aa--~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g--~~eiv~~LL~~~~  402 (793)
                      +++|+++|++++ ..+..|.||||+|+  ..|+.+++++|+++|++++..+..|.||||+|+..|  +.++++.|+++|+
T Consensus        89 v~~Ll~~ga~i~-~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~  167 (480)
T PHA03100         89 VKLLLEYGANVN-APDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGV  167 (480)
T ss_pred             HHHHHHCCCCCC-CCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCC
Confidence            999999999995 79999999999999  999999999999999999999999999999999999  9999999999999


Q ss_pred             ccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHHHHHHhcCccccccccC
Q 003814          403 QLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLR  482 (793)
Q Consensus       403 ~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~~~  482 (793)
                      ++ +.+|..|.||||+|+..|+                                  .++++.|++.     +++++..+.
T Consensus       168 di-n~~d~~g~tpL~~A~~~~~----------------------------------~~iv~~Ll~~-----ga~~~~~~~  207 (480)
T PHA03100        168 DI-NAKNRYGYTPLHIAVEKGN----------------------------------IDVIKFLLDN-----GADINAGDI  207 (480)
T ss_pred             Cc-ccccCCCCCHHHHHHHhCC----------------------------------HHHHHHHHHc-----CCCccCCCC
Confidence            96 8889999999999999986                                  3666666665     555566666


Q ss_pred             CC------ChHHHHHHHcCC--HHHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhhcccCC
Q 003814          483 KP------SRLLFTAVELGN--VEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDEN  554 (793)
Q Consensus       483 ~g------~t~Lh~Aa~~g~--~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n~~D~~  554 (793)
                      .|      .||||.|+..|+  .+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|+|++.    +|..
T Consensus       208 ~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~d-in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~----~d~~  282 (480)
T PHA03100        208 ETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVP-INIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNL----VNKY  282 (480)
T ss_pred             CCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc----cCCC
Confidence            66      899999999999  9999999999999 899999999999999999999999999999999986    9999


Q ss_pred             CCcHHHHHhHhCCCCc--ccccCCchhHh
Q 003814          555 NNNMLHLAGKLAPPDR--LKIDSGAALQL  581 (793)
Q Consensus       555 G~TpLHlAa~~~~~~~--l~l~~Ga~~~~  581 (793)
                      |+||||+|++.++.+.  ++++.|++++.
T Consensus       283 g~tpl~~A~~~~~~~iv~~Ll~~g~~i~~  311 (480)
T PHA03100        283 GDTPLHIAILNNNKEIFKLLLNNGPSIKT  311 (480)
T ss_pred             CCcHHHHHHHhCCHHHHHHHHhcCCCHHH
Confidence            9999999999988764  55677877654


No 17 
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.1e-36  Score=355.49  Aligned_cols=368  Identities=11%  Similarity=0.008  Sum_probs=271.4

Q ss_pred             hhcCCCCcCCcccCCCCCchHHHHHHHc---CCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHH----HHHHHH
Q 003814          224 LSQPGAVSGGVERNCFTSYAPLHLAALK---GDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTL----FVQELV  296 (793)
Q Consensus       224 l~~~G~~~~~~~~~d~~g~T~Lh~Aa~~---G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~e----iVk~LL  296 (793)
                      ++..|.   .++.+|.+|+||||+||..   |+.++|+.||+.+. +++.+ +..|.||||+|+..|+.+    +++.|+
T Consensus        18 l~~~~~---~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga-~v~~~-~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll   92 (661)
T PHA02917         18 MLRDRD---PNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGT-NPLHK-NWRQLTPLEEYTNSRHVKVNKDIAMALL   92 (661)
T ss_pred             HHhccC---cccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCC-Ccccc-CCCCCCHHHHHHHcCChhHHHHHHHHHH
Confidence            344565   3467789999999998665   88999999998654 55554 899999999999999954    567787


Q ss_pred             hcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHhcCCCCCcc
Q 003814          297 NLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAA--LLGHKEMIWYLYSVTKEEDLK  374 (793)
Q Consensus       297 ~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa--~~g~~eiv~~Ll~~gad~n~~  374 (793)
                      +  .+...+..|  ..+++|.|+.+|+.++|++|+++|++++ .+|.+|.||||.|+  ..|+.+++++|+++|++++.+
T Consensus        93 ~--~~~~~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin-~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~  167 (661)
T PHA02917         93 E--ATGYSNIND--FNIFSYMKSKNVDVDLIKVLVEHGFDLS-VKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYE  167 (661)
T ss_pred             h--ccCCCCCCC--cchHHHHHhhcCCHHHHHHHHHcCCCCC-ccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccc
Confidence            7  333344433  3478888999999999999999999997 78999999999654  578999999999999999866


Q ss_pred             cc---cC-----------chHHHHHHH-----------cCChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCcccc
Q 003814          375 EE---DR-----------IELLVAVID-----------AGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASG  429 (793)
Q Consensus       375 ~~---~g-----------~t~Lh~A~~-----------~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~  429 (793)
                      |.   .|           .||||+|+.           .++.+++++|+++|+++ +.+|.+|.||||+|+..|+.    
T Consensus       168 d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadv-n~~d~~G~TpLh~A~~~g~~----  242 (661)
T PHA02917        168 DEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKP-SSIDKNYCTALQYYIKSSHI----  242 (661)
T ss_pred             ccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCc-ccCCCCCCcHHHHHHHcCCC----
Confidence            53   23           599999986           46899999999999996 89999999999999999873    


Q ss_pred             chhhHHHHhhhcCCC------cccccCCchhHHHH-------------HHHHHHHHHHHHhcCcc------cccc-----
Q 003814          430 SQLGFWRRCIYSVPG------MRAILDPKLMHLQA-------------LELVKRLWEQVLLLDDS------KIGE-----  479 (793)
Q Consensus       430 ~~~~~~~~ll~~~~~------~~~~~~~t~lh~a~-------------~~~~~~Ll~~~l~~~~~------~~~~-----  479 (793)
                       ..++++.|+. +.+      ..+..+.+++|.++             .++++.|++.+......      ..+.     
T Consensus       243 -~~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~  320 (661)
T PHA02917        243 -DIDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETIS  320 (661)
T ss_pred             -cHHHHHHHHh-CCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHH
Confidence             2578998875 332      34445566666665             25678888776431100      0010     


Q ss_pred             ---ccCCCChHHHHHH---HcCC--HHHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHH-cCCChhhhhhc
Q 003814          480 ---LLRKPSRLLFTAV---ELGN--VEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYE-LGAHKDLIASY  550 (793)
Q Consensus       480 ---~~~~g~t~Lh~Aa---~~g~--~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~-~gad~~~l~n~  550 (793)
                         ....+.+++|.+.   ..|.  .+++++|+++|++ ++.++.+|.|+.    ...+.+++++|+. .|++++.    
T Consensus       321 ~~~~~~~~~~~~~~l~~~~~~g~~~~~~v~~Ll~~GAd-vn~~~~~g~~~~----~~~~~~~i~~LL~~~ga~~~~----  391 (661)
T PHA02917        321 LILKTMNSDVLQHILIEYMTFGDIDIPLVECMLEYGAV-VNKEAIHGYFRN----INIDSYTMKYLLKKEGGDAVN----  391 (661)
T ss_pred             HHHHHhchHHHHHHHHHHHHcCCCcHHHHHHHHHcCCC-CCCCCccccchh----hcCCHHHHHHHHHhcCCCccc----
Confidence               1223445555443   4676  5699999999999 788999999854    3667888888887 6888664    


Q ss_pred             ccCCCCcHHHHHhHhCCC--Cc--ccccCCchhHhHHHhhhHHHHHHhhc-cchhHhhhcCCCCchhhhhhhh
Q 003814          551 KDENNNNMLHLAGKLAPP--DR--LKIDSGAALQLRRELHWFKEIEKVVQ-PSYREAKNSEGRTPHILFSEEH  618 (793)
Q Consensus       551 ~D~~G~TpLHlAa~~~~~--~~--l~l~~Ga~~~~~~~l~~~~~v~~ll~-~~~~~~~n~~G~Tpl~la~e~~  618 (793)
                      +|.+|+||||.|++.+..  +.  .....|.. ++.+.-.-.+.++.+++ +++++.+|..|+||||+|+...
T Consensus       392 ~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~  463 (661)
T PHA02917        392 HLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLC-DMSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYN  463 (661)
T ss_pred             cCCCCCChhHHHHHhcccchhhhhhhhhhccc-hhhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcC
Confidence            677899999999876542  11  11122211 11111223556777777 7799999999999999998654


No 18 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=100.00  E-value=1.2e-38  Score=374.08  Aligned_cols=432  Identities=21%  Similarity=0.211  Sum_probs=292.0

Q ss_pred             cccccCCCCChhhhhccCcchhcccCCCccccccccccCCCCCCccCCCCchhhhhhhhhcCCCCchhhHHhhcCCCCc-
Q 003814          153 ASGNQNSHLQPPQAISSSIDFFEARGPDAHVVLDPSIWPMYASSDQVPSTSAELSRAAADESSGFAQPAVSLSQPGAVS-  231 (793)
Q Consensus       153 ~~a~~~g~~~iv~~is~~~~~v~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~l~~~G~~~-  231 (793)
                      ..+.+-+|....+.+.........-..++.+++..++.......... ....+....+.+.++  .+|+|.|+..|+.. 
T Consensus       181 ~~~~~~~~~~~~~ll~~~~~~~~a~~~~~~tpl~~a~~~nri~~~eL-ll~~gadv~a~d~~g--l~~lh~a~~~g~~~i  257 (1143)
T KOG4177|consen  181 HVAAHCGHARVAKLLLDKKADPNASALNGFTPLHIACKKNRIKVVEL-LLKHGADVSAKDESG--LTPLHVAAFMGHLDI  257 (1143)
T ss_pred             hHHhhcchHHHHhhhhcccCCccccccCCCCchhhhccccccceeee-eeeccCcCCcccccC--ccHHHHHHhccchhH
Confidence            34444555555554433333333333344444444443333332221 122333444444444  55666666666653 


Q ss_pred             --------CCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCc
Q 003814          232 --------GGVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPED  303 (793)
Q Consensus       232 --------~~~~~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad  303 (793)
                              ..++..+.+|.||||.||+.+..+++++|++.+.+ +... +....||+|+|...|+.++++.+++  .++.
T Consensus       258 ~~~l~~~ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~~ga~-~~~~-~~~~kt~l~~a~~~g~~~i~~~~l~--~~~~  333 (1143)
T KOG4177|consen  258 VKLLLQHGASVNVSTVRGETPLHMAARAGQVEVCKLLLQNGAD-VLAK-ARDDQTPLHIASRLGHEEIVHLLLQ--AGAT  333 (1143)
T ss_pred             HHHHHhcccccCcccccccCcchhhhccchhhhHhhhhccCcc-cccc-cccccChhhhhcccchHHHHHHHhh--ccCC
Confidence                    35666777777777777777777777777755443 2222 5666677777777777777777777  5666


Q ss_pred             ccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHH
Q 003814          304 LALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLV  383 (793)
Q Consensus       304 ~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh  383 (793)
                      +++.+..|.||||+++..++.+++.+|.+.+++-. ..+..|.||+|.|+..|..+++++++++|++++..+..|.||||
T Consensus       334 ~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~-~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh  412 (1143)
T KOG4177|consen  334 PNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQRR-QAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLH  412 (1143)
T ss_pred             ccccCcCCcccccHhhhhhhHHHHHHhhccccccC-cccccCCcchhhhcccCchhHHHhhhhccCCcccCCCCCcceee
Confidence            77777777777777777777776666666666654 56677888888888888888888888888888888888888888


Q ss_pred             HHHHcCChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhh--hcCCCcccccCCchhHHHHH--
Q 003814          384 AVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCI--YSVPGMRAILDPKLMHLQAL--  459 (793)
Q Consensus       384 ~A~~~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll--~~~~~~~~~~~~t~lh~a~~--  459 (793)
                      .|...++.++++.+++++++. +..+..|.||+|+|+..|.      ..+....+.  ...++.....|.||+|.++.  
T Consensus       413 ~aa~~~~~~~v~l~l~~gA~~-~~~~~lG~T~lhvaa~~g~------~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~G  485 (1143)
T KOG4177|consen  413 VAAHYGNPRVVKLLLKRGASP-NAKAKLGYTPLHVAAKKGR------YLQIARLLLQYGADPNAVSKQGFTPLHLAAQEG  485 (1143)
T ss_pred             ehhhccCcceEEEEeccCCCh-hhHhhcCCChhhhhhhccc------HhhhhhhHhhcCCCcchhccccCcchhhhhccC
Confidence            888888888888888888775 7788888888888888763      122222222  23444455555666665542  


Q ss_pred             --HHHHHHHH----------------------------HHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCC
Q 003814          460 --ELVKRLWE----------------------------QVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPN  509 (793)
Q Consensus       460 --~~~~~Ll~----------------------------~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d  509 (793)
                        +.+..+.+                            ..+...+.+++.++..|+||||.||..|+.++|++|+++|+|
T Consensus       486 h~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAd  565 (1143)
T KOG4177|consen  486 HTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGAD  565 (1143)
T ss_pred             CchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCcc
Confidence              12222211                            123334777888888999999999999999999999999999


Q ss_pred             CcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhhcccCCCCcHHHHHhHhCCCCccc--ccCCchhHhHHHhhh
Q 003814          510 LIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKLAPPDRLK--IDSGAALQLRRELHW  587 (793)
Q Consensus       510 ~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n~~D~~G~TpLHlAa~~~~~~~l~--l~~Ga~~~~~~~l~~  587 (793)
                       ++.+|+.|+||||.|+..|+.+++++|+++|+++|.    .|.+|.||||+|+..|+.+.+.  ...|+..        
T Consensus       566 -v~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna----~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~--------  632 (1143)
T KOG4177|consen  566 -VNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNA----ADLDGFTPLHIAVRLGYLSVVKLLKVVTATP--------  632 (1143)
T ss_pred             -ccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCc----ccccCcchhHHHHHhcccchhhHHHhccCcc--------
Confidence             888889999999999999999999999999999986    8999999999999999876432  2222221        


Q ss_pred             HHHHHHhhccchhHhhhcCCCCchhhhhhhhhh
Q 003814          588 FKEIEKVVQPSYREAKNSEGRTPHILFSEEHRR  620 (793)
Q Consensus       588 ~~~v~~ll~~~~~~~~n~~G~Tpl~la~e~~~~  620 (793)
                              ........+..|.||.++..+...+
T Consensus       633 --------~~~~~~~e~~~g~~p~~v~e~~~~~  657 (1143)
T KOG4177|consen  633 --------AATDPVKENRKGAVPEDVAEELDTD  657 (1143)
T ss_pred             --------ccccchhhhhcccChhhHHHHhhhh
Confidence                    1122467888999999987665543


No 19 
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=2.1e-36  Score=343.69  Aligned_cols=347  Identities=10%  Similarity=0.019  Sum_probs=270.0

Q ss_pred             chhhHHhhcCCCCcCCcccCCCCCchHHHHHHHcC--CHHHHHHHHhcCCccccccCCCCCchHHHHHHH--hCcHHHHH
Q 003814          218 AQPAVSLSQPGAVSGGVERNCFTSYAPLHLAALKG--DWDFARNFFNLNPEAVCVRISRNQDTALHIAAG--ARRTLFVQ  293 (793)
Q Consensus       218 ~~~l~~l~~~G~~~~~~~~~d~~g~T~Lh~Aa~~G--~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~--~g~~eiVk  293 (793)
                      ...+.+++.+|+   +++.+|..|+||||+|+..|  +.|+|+.|++.+........+..+++|||.++.  +++.++|+
T Consensus        57 ~eivklLLs~GA---din~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk  133 (672)
T PHA02730         57 IKIVRLLLSRGV---ERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLK  133 (672)
T ss_pred             HHHHHHHHhCCC---CCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHH
Confidence            456666777777   67788999999999999977  799999999876543223237779999999998  99999999


Q ss_pred             HHHhcCCCCccccccc-----CCChHHHHHHHhCcHHHHHHHHhCCCCCCCC------CCCCCC-CHHHHH------HHc
Q 003814          294 ELVNLMTPEDLALRNK-----VGNTALCFAAVSGVTKIAEVMVNKNRELPSI------RGNKGA-TPLCMA------ALL  355 (793)
Q Consensus       294 ~LL~~~~gad~~~~d~-----~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~------~~~~G~-TpLh~A------a~~  355 (793)
                      +|++. .+.+++...+     .|.+|+++|...++.|+|++|+++|++++..      .+..+. |.||++      ..+
T Consensus       134 ~Li~~-~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~  212 (672)
T PHA02730        134 YLIVD-KRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESES  212 (672)
T ss_pred             HHHHh-cCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCccchhHHHHHHhhhhhhc
Confidence            99963 5678776533     7999999999999999999999999998511      233344 555543      456


Q ss_pred             CCHHHHHHHHhcCCCCCcccccCchHHHH--HHHcCChhHHHHHHh--------------------------------hC
Q 003814          356 GHKEMIWYLYSVTKEEDLKEEDRIELLVA--VIDAGLYDVALDLIQ--------------------------------HH  401 (793)
Q Consensus       356 g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~--A~~~g~~eiv~~LL~--------------------------------~~  401 (793)
                      ++.|++++|+++|+++|.+|.+|.||||+  +...++.|++++|++                                +|
T Consensus       213 n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (672)
T PHA02730        213 LSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYN  292 (672)
T ss_pred             cCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCC
Confidence            78999999999999999999999999995  555677999999999                                45


Q ss_pred             cccccc--------------------cCCCCCC---------------------HHHHHHhCCCCccccchhhHHHHhhh
Q 003814          402 PQLAMA--------------------RDGNGET---------------------ALHVLARKPSAFASGSQLGFWRRCIY  440 (793)
Q Consensus       402 ~~~~~~--------------------~d~~G~T---------------------pLh~A~~~g~~~~s~~~~~~~~~ll~  440 (793)
                      .+. ..                    .+..|.+                     .||.-.+.++    -...++++.|+.
T Consensus       293 ~d~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~----~v~ieIvelLIs  367 (672)
T PHA02730        293 VDM-EIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGD----MVSIPILRCMLD  367 (672)
T ss_pred             cch-HHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCC----cCcHHHHHHHHH
Confidence            553 22                    3445544                     4555555441    025789999997


Q ss_pred             cCCCccc-ccCCchhHHHHH--------HHHHHHHHHHHhcCcc--ccccccCCCChHHHH---HHHcC---------CH
Q 003814          441 SVPGMRA-ILDPKLMHLQAL--------ELVKRLWEQVLLLDDS--KIGELLRKPSRLLFT---AVELG---------NV  497 (793)
Q Consensus       441 ~~~~~~~-~~~~t~lh~a~~--------~~~~~Ll~~~l~~~~~--~~~~~~~~g~t~Lh~---Aa~~g---------~~  497 (793)
                      .++++.. ..|.||||.++.        +++++|+++     ++  +++.+|..|.||||.   |...+         ..
T Consensus       368 ~GAdIN~k~~G~TpLH~Aa~~nnn~i~~eIvelLIs~-----Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~  442 (672)
T PHA02730        368 NGATMDKTTDNNYPLHDYFVNNNNIVDVNVVRFIVEN-----NGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILI  442 (672)
T ss_pred             CCCCCCcCCCCCcHHHHHHHHcCCcchHHHHHHHHHc-----CCCccccccccCCCchHhHHHHHHhccccccccchhHH
Confidence            7765433 578899998763        566666654     44  678888999999994   33332         23


Q ss_pred             HHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhhcccC-CCCcHHHHHhHh--CCCC--ccc
Q 003814          498 EFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDE-NNNNMLHLAGKL--APPD--RLK  572 (793)
Q Consensus       498 eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n~~D~-~G~TpLHlAa~~--~~~~--~l~  572 (793)
                      +++++|+++|++ ++.+|..|+||||+|+..++.+++++|+++|++++.    +|. .|+||||+|+..  ++.+  .++
T Consensus       443 ~ivk~LIs~GAD-INakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~----~d~~~g~TaL~~Aa~~~~~~~eIv~~L  517 (672)
T PHA02730        443 DVFDILSKYMDD-IDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNT----TSRSIINTAIQKSSYRRENKTKLVDLL  517 (672)
T ss_pred             HHHHHHHhcccc-hhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCC----CCCcCCcCHHHHHHHhhcCcHHHHHHH
Confidence            679999999999 899999999999999999999999999999999986    886 599999999974  3333  466


Q ss_pred             ccCCchhHhHH
Q 003814          573 IDSGAALQLRR  583 (793)
Q Consensus       573 l~~Ga~~~~~~  583 (793)
                      +..|+.++...
T Consensus       518 Ls~ga~i~~I~  528 (672)
T PHA02730        518 LSYHPTLETMI  528 (672)
T ss_pred             HHcCCCHHHHH
Confidence            78888876543


No 20 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=100.00  E-value=1.1e-37  Score=365.86  Aligned_cols=393  Identities=18%  Similarity=0.155  Sum_probs=308.1

Q ss_pred             CcccccCCCCChhhhhccCcchhcccCCCccccccccccCCCCCCccCCC-CchhhhhhhhhcCCCCchhhHHhhcCCCC
Q 003814          152 GASGNQNSHLQPPQAISSSIDFFEARGPDAHVVLDPSIWPMYASSDQVPS-TSAELSRAAADESSGFAQPAVSLSQPGAV  230 (793)
Q Consensus       152 ~~~a~~~g~~~iv~~is~~~~~v~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~l~~l~~~G~~  230 (793)
                      ...++..||++|++++..+...+....-.+.++.+.++..+..+...... .+..+......    ..+|++.+...|+.
T Consensus       246 lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~~ga~~~~~~~~----~kt~l~~a~~~g~~  321 (1143)
T KOG4177|consen  246 LHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAARAGQVEVCKLLLQNGADVLAKARD----DQTPLHIASRLGHE  321 (1143)
T ss_pred             HHHHHhccchhHHHHHHhcccccCcccccccCcchhhhccchhhhHhhhhccCccccccccc----ccChhhhhcccchH
Confidence            46678888899988888888888777777777777777554444221111 11111111111    13466665555543


Q ss_pred             c---------CCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCC
Q 003814          231 S---------GGVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTP  301 (793)
Q Consensus       231 ~---------~~~~~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~g  301 (793)
                      .         ...+..+..|.||||+++..|+.+++..+...++....  .+..|.||+|.|+..|..++|+.+++  .|
T Consensus       322 ~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~--a~~k~~~pl~la~~~g~~~~v~Lll~--~g  397 (1143)
T KOG4177|consen  322 EIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQRRQ--AEEKGFTPLHLAVKSGRVSVVELLLE--AG  397 (1143)
T ss_pred             HHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhccccccCc--ccccCCcchhhhcccCchhHHHhhhh--cc
Confidence            2         35677778888888888888888877766655443332  26788888998888888888888888  78


Q ss_pred             CcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHhcCCCCCcccccCch
Q 003814          302 EDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLG-HKEMIWYLYSVTKEEDLKEEDRIE  380 (793)
Q Consensus       302 ad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g-~~eiv~~Ll~~gad~n~~~~~g~t  380 (793)
                      ++++.+++.|.||||.|+..++.++|+.++++|++.+ ..+..|.||+|+|+..| ..++...+++.|+++|.....|.|
T Consensus       398 a~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~-~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T  476 (1143)
T KOG4177|consen  398 ADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPN-AKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFT  476 (1143)
T ss_pred             CCcccCCCCCcceeeehhhccCcceEEEEeccCCChh-hHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCc
Confidence            8888888888899999888888888888888888886 78888889999988888 788888888888888888888899


Q ss_pred             HHHHHHHcCChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCC--cccccCCchhHHHH
Q 003814          381 LLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPG--MRAILDPKLMHLQA  458 (793)
Q Consensus       381 ~Lh~A~~~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~--~~~~~~~t~lh~a~  458 (793)
                      |||.|...|+.++++.|++.++.+ +...+.|.|++|.+...+.       ....+.++..+.+  .+...+.||||.++
T Consensus       477 ~Lhlaaq~Gh~~~~~llle~~~~~-~~~~~~~l~~lhla~~~~~-------v~~~~~l~~~ga~v~~~~~r~~TpLh~A~  548 (1143)
T KOG4177|consen  477 PLHLAAQEGHTEVVQLLLEGGAND-NLDAKKGLTPLHLAADEDT-------VKVAKILLEHGANVDLRTGRGYTPLHVAV  548 (1143)
T ss_pred             chhhhhccCCchHHHHhhhcCCcc-Cccchhccchhhhhhhhhh-------HHHHHHHhhcCCceehhcccccchHHHHH
Confidence            999988889888888888887664 5666788888988888765       5667777755554  45566779999998


Q ss_pred             ----HHHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHH
Q 003814          459 ----LELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIF  534 (793)
Q Consensus       459 ----~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv  534 (793)
                          ...+++|+++     +++++.+++.|+||||.||..|+.+++.+|+++|++ +|..|.+|.||||+|+..|+.+++
T Consensus       549 ~~g~v~~VkfLLe~-----gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~-vna~d~~g~TpL~iA~~lg~~~~~  622 (1143)
T KOG4177|consen  549 HYGNVDLVKFLLEH-----GADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGAS-VNAADLDGFTPLHIAVRLGYLSVV  622 (1143)
T ss_pred             hcCCchHHHHhhhC-----CccccccCCCCCChhhHHHHcChHHHHHHHHHcCCC-CCcccccCcchhHHHHHhcccchh
Confidence                5788888876     888889999999999999999999999999999999 999999999999999999999999


Q ss_pred             HHHHHcCCChhhh-hhcccCCCCcHHHHHhHhCC
Q 003814          535 NLIYELGAHKDLI-ASYKDENNNNMLHLAGKLAP  567 (793)
Q Consensus       535 ~~Ll~~gad~~~l-~n~~D~~G~TpLHlAa~~~~  567 (793)
                      ++|+..+++.... .......|.||..++-....
T Consensus       623 k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e~~~~  656 (1143)
T KOG4177|consen  623 KLLKVVTATPAATDPVKENRKGAVPEDVAEELDT  656 (1143)
T ss_pred             hHHHhccCccccccchhhhhcccChhhHHHHhhh
Confidence            9999999882110 12378899999999877654


No 21 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=3.7e-36  Score=344.53  Aligned_cols=274  Identities=15%  Similarity=0.117  Sum_probs=231.0

Q ss_pred             CCCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHH
Q 003814          237 NCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALC  316 (793)
Q Consensus       237 ~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh  316 (793)
                      ....+.||||+||..|+.++|+.|++.+. +++.+ |..|.||||+||..|+.++++.|++  .+.+.+.  ..+.+|||
T Consensus        33 ~~~~~~tPLh~A~~~g~~e~vk~Ll~~ga-dvn~~-d~~g~TpLh~A~~~g~~~~v~~Ll~--~~~~~~~--~~~~~~l~  106 (477)
T PHA02878         33 ASLIPFIPLHQAVEARNLDVVKSLLTRGH-NVNQP-DHRDLTPLHIICKEPNKLGMKEMIR--SINKCSV--FYTLVAIK  106 (477)
T ss_pred             ccccCcchHHHHHHcCCHHHHHHHHHCCC-CCCCC-CCCCCCHHHHHHHCccHhHHHHHHH--HHhcccc--ccchhhHH
Confidence            34567899999999999999999998654 55554 8999999999999999999999999  4444333  56889999


Q ss_pred             HHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHhcCCCCCccccc-CchHHHHHHHcCChhH
Q 003814          317 FAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLG--HKEMIWYLYSVTKEEDLKEED-RIELLVAVIDAGLYDV  393 (793)
Q Consensus       317 ~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g--~~eiv~~Ll~~gad~n~~~~~-g~t~Lh~A~~~g~~ei  393 (793)
                      .|+..|+.+++++|+..+.+.....+   ...+..+...+  +.+++++|+++|++++..+.. |.||||+|+..|+.++
T Consensus       107 ~a~~~~~~ei~~~Ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~i  183 (477)
T PHA02878        107 DAFNNRNVEIFKIILTNRYKNIQTID---LVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRL  183 (477)
T ss_pred             HHHHcCCHHHHHHHHhCcccCcccCc---HHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHH
Confidence            99999999999999988654321111   11111111222  356999999999999999998 9999999999999999


Q ss_pred             HHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHHHHHHhcC
Q 003814          394 ALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLD  473 (793)
Q Consensus       394 v~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~  473 (793)
                      +++|++.|+++ +.+|..|.||||.|+..++                                  .++++.|++.     
T Consensus       184 v~~Ll~~gad~-n~~d~~g~tpLh~A~~~~~----------------------------------~~iv~~Ll~~-----  223 (477)
T PHA02878        184 TELLLSYGANV-NIPDKTNNSPLHHAVKHYN----------------------------------KPIVHILLEN-----  223 (477)
T ss_pred             HHHHHHCCCCC-CCcCCCCCCHHHHHHHhCC----------------------------------HHHHHHHHHc-----
Confidence            99999999996 8899999999999999887                                  3677777665     


Q ss_pred             ccccccccCCCChHHHHHHHc-CCHHHHHHHHHhCCCCcccccC-CCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhhcc
Q 003814          474 DSKIGELLRKPSRLLFTAVEL-GNVEFLMVLIQMYPNLIWKVDD-HSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYK  551 (793)
Q Consensus       474 ~~~~~~~~~~g~t~Lh~Aa~~-g~~eiv~~LL~~g~d~~~~~d~-~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n~~  551 (793)
                      +++++.+|..|.||||+|+.. ++.+++++|+++|++ ++.++. .|+||||+|  .++.+++++|+++|+|++.    +
T Consensus       224 ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gad-vn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~----~  296 (477)
T PHA02878        224 GASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVD-VNAKSYILGLTALHSS--IKSERKLKLLLEYGADINS----L  296 (477)
T ss_pred             CCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCC-CCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCC----c
Confidence            678888899999999999976 799999999999999 666665 899999999  5788999999999999986    9


Q ss_pred             cCCCCcHHHHHhHhC
Q 003814          552 DENNNNMLHLAGKLA  566 (793)
Q Consensus       552 D~~G~TpLHlAa~~~  566 (793)
                      |.+|+||||+|++.+
T Consensus       297 d~~g~TpL~~A~~~~  311 (477)
T PHA02878        297 NSYKLTPLSSAVKQY  311 (477)
T ss_pred             CCCCCCHHHHHHHHc
Confidence            999999999999854


No 22 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=2.5e-36  Score=345.92  Aligned_cols=271  Identities=16%  Similarity=0.093  Sum_probs=225.1

Q ss_pred             CCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHH
Q 003814          273 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA  352 (793)
Q Consensus       273 d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~A  352 (793)
                      +..+.||||+||..|+.++|++|++  .|++++.+|..|.||||+||..|+.++++.|++.+.+.. .  ..+.+|++.|
T Consensus        34 ~~~~~tPLh~A~~~g~~e~vk~Ll~--~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~-~--~~~~~~l~~a  108 (477)
T PHA02878         34 SLIPFIPLHQAVEARNLDVVKSLLT--RGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCS-V--FYTLVAIKDA  108 (477)
T ss_pred             cccCcchHHHHHHcCCHHHHHHHHH--CCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccc-c--ccchhhHHHH
Confidence            4578899999999999999999999  899999999999999999999999999999999876653 2  5688999999


Q ss_pred             HHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcC--ChhHHHHHHhhCcccccccCCC-CCCHHHHHHhCCCCcccc
Q 003814          353 ALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAG--LYDVALDLIQHHPQLAMARDGN-GETALHVLARKPSAFASG  429 (793)
Q Consensus       353 a~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g--~~eiv~~LL~~~~~~~~~~d~~-G~TpLh~A~~~g~~~~s~  429 (793)
                      +..++.+++++|+..+.+......  ...+......+  ..++++.|+++|+++ +..+.+ |.||||+|+..|+     
T Consensus       109 ~~~~~~ei~~~Ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~Ll~~gadi-n~~~~~~g~tpLh~A~~~~~-----  180 (477)
T PHA02878        109 FNNRNVEIFKIILTNRYKNIQTID--LVYIDKKSKDDIIEAEITKLLLSYGADI-NMKDRHKGNTALHYATENKD-----  180 (477)
T ss_pred             HHcCCHHHHHHHHhCcccCcccCc--HHHHhhccchhhHHHHHHHHHHHcCCCC-CccCCCCCCCHHHHHHhCCC-----
Confidence            999999999999988654322110  11111111122  346999999999996 788888 9999999999987     


Q ss_pred             chhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCC
Q 003814          430 SQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPN  509 (793)
Q Consensus       430 ~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d  509 (793)
                                                   .++++.|++.     +++++..+..|.||||.|+..|+.+++++|+++|++
T Consensus       181 -----------------------------~~iv~~Ll~~-----gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~  226 (477)
T PHA02878        181 -----------------------------QRLTELLLSY-----GANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAS  226 (477)
T ss_pred             -----------------------------HHHHHHHHHC-----CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence                                         3777777765     677888899999999999999999999999999999


Q ss_pred             CcccccCCCCCHHHHHHHc-CCHHHHHHHHHcCCChhhhhhcccC-CCCcHHHHHhHhCCCCcccccCCchhHhHHHhhh
Q 003814          510 LIWKVDDHSRSMFHIAVVH-RQEKIFNLIYELGAHKDLIASYKDE-NNNNMLHLAGKLAPPDRLKIDSGAALQLRRELHW  587 (793)
Q Consensus       510 ~~~~~d~~G~T~Lh~A~~~-g~~~iv~~Ll~~gad~~~l~n~~D~-~G~TpLHlAa~~~~~~~l~l~~Ga~~~~~~~l~~  587 (793)
                       ++.+|..|+||||+|+.. ++.+++++|+++|++++.    ++. .|+||||+|+....                    
T Consensus       227 -in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~----~~~~~g~TpLh~A~~~~~--------------------  281 (477)
T PHA02878        227 -TDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNA----KSYILGLTALHSSIKSER--------------------  281 (477)
T ss_pred             -CCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCc----cCCCCCCCHHHHHccCHH--------------------
Confidence             899999999999999975 799999999999999986    665 89999999943211                    


Q ss_pred             HHHHHHhhc-cchhHhhhcCCCCchhhhhhh
Q 003814          588 FKEIEKVVQ-PSYREAKNSEGRTPHILFSEE  617 (793)
Q Consensus       588 ~~~v~~ll~-~~~~~~~n~~G~Tpl~la~e~  617 (793)
                        .++.++. +++++.+|.+|+||+++|.++
T Consensus       282 --~v~~Ll~~gadin~~d~~g~TpL~~A~~~  310 (477)
T PHA02878        282 --KLKLLLEYGADINSLNSYKLTPLSSAVKQ  310 (477)
T ss_pred             --HHHHHHHCCCCCCCcCCCCCCHHHHHHHH
Confidence              2333333 456699999999999999874


No 23 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=2.9e-35  Score=338.28  Aligned_cols=283  Identities=15%  Similarity=0.162  Sum_probs=232.2

Q ss_pred             chhhHHhhcCCCCcCCcccCCCCCchHHHHHHHc--CCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhC------cH
Q 003814          218 AQPAVSLSQPGAVSGGVERNCFTSYAPLHLAALK--GDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGAR------RT  289 (793)
Q Consensus       218 ~~~l~~l~~~G~~~~~~~~~d~~g~T~Lh~Aa~~--G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g------~~  289 (793)
                      ...+..+++.|++   +|.. .+|.||||.++..  ++.++|+.|++.+. +++.+ + .+.||||.|+.++      +.
T Consensus        16 ~~~v~~LL~~Gad---vN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GA-dvn~~-~-~~~tpL~~a~~~~~~~~~~~~   88 (494)
T PHA02989         16 KNALEFLLRTGFD---VNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGA-DVNYK-G-YIETPLCAVLRNREITSNKIK   88 (494)
T ss_pred             HHHHHHHHHcCCC---cccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCC-CccCC-C-CCCCcHHHHHhccCcchhhHH
Confidence            4566678888984   5555 4688998876654  36899999998654 55543 3 5789999998754      57


Q ss_pred             HHHHHHHhcCCCCcccccccCCChHHHHHHHh---CcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHc--CCHHHHHHH
Q 003814          290 LFVQELVNLMTPEDLALRNKVGNTALCFAAVS---GVTKIAEVMVNKNRELPSIRGNKGATPLCMAALL--GHKEMIWYL  364 (793)
Q Consensus       290 eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~---g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~--g~~eiv~~L  364 (793)
                      ++|++|++  +|+|+|.+|..|.||||.|+..   |+.+++++|+++|++++..+|..|.||||+|+..  ++.++|++|
T Consensus        89 ~iv~~Ll~--~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~L  166 (494)
T PHA02989         89 KIVKLLLK--FGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKIL  166 (494)
T ss_pred             HHHHHHHH--CCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHH
Confidence            89999999  8999999999999999988765   6789999999999999547899999999998764  689999999


Q ss_pred             HhcCCCCCc-ccccCchHHHHHHHcC----ChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhh
Q 003814          365 YSVTKEEDL-KEEDRIELLVAVIDAG----LYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCI  439 (793)
Q Consensus       365 l~~gad~n~-~~~~g~t~Lh~A~~~g----~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll  439 (793)
                      +++|++++. .+..|.||||.|+..+    +.+++++|+++|+++ +.+|..|.||||.++..+.....           
T Consensus       167 l~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~v-n~~~~~~~t~l~~~~~~~~~~~~-----------  234 (494)
T PHA02989        167 LSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNI-ETNNNGSESVLESFLDNNKILSK-----------  234 (494)
T ss_pred             HHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCc-cccCCccccHHHHHHHhchhhcc-----------
Confidence            999999988 6788999999988764    889999999999986 78888899999988865421000           


Q ss_pred             hcCCCcccccCCchhHHHHHHHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCC
Q 003814          440 YSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSR  519 (793)
Q Consensus       440 ~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~  519 (793)
                                       ...++++++.      ++++++.+|..|.||||+|+..|+.+++++|+++|+| ++.+|..|+
T Consensus       235 -----------------~~~~il~~l~------~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gad-in~~d~~G~  290 (494)
T PHA02989        235 -----------------KEFKVLNFIL------KYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDD-IYNVSKDGD  290 (494)
T ss_pred             -----------------cchHHHHHHH------hCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCC-ccccCCCCC
Confidence                             0013333332      2578889999999999999999999999999999999 889999999


Q ss_pred             CHHHHHHHcCCHHHHHHHHHcCCChh
Q 003814          520 SMFHIAVVHRQEKIFNLIYELGAHKD  545 (793)
Q Consensus       520 T~Lh~A~~~g~~~iv~~Ll~~gad~~  545 (793)
                      ||||+|+..|+.++++.|++.+...+
T Consensus       291 TpL~~A~~~~~~~iv~~LL~~~p~~~  316 (494)
T PHA02989        291 TVLTYAIKHGNIDMLNRILQLKPGKY  316 (494)
T ss_pred             CHHHHHHHcCCHHHHHHHHhcCCChH
Confidence            99999999999999999999876544


No 24 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=2.7e-35  Score=309.76  Aligned_cols=235  Identities=14%  Similarity=0.077  Sum_probs=183.0

Q ss_pred             cCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHH
Q 003814          251 KGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVM  330 (793)
Q Consensus       251 ~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~L  330 (793)
                      .++.+++++|++.+..   . .|.+|+||||+|+..|+.+++++|++  .|++++.++  |+||||+|+..|+.++|++|
T Consensus         9 ~~~~~~~~~Lis~~a~---~-~D~~G~TpLh~Aa~~g~~eiv~~Ll~--~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lL   80 (284)
T PHA02791          9 WKSKQLKSFLSSKDAF---K-ADVHGHSALYYAIADNNVRLVCTLLN--AGALKNLLE--NEFPLHQAATLEDTKIVKIL   80 (284)
T ss_pred             cCHHHHHHHHHhCCCC---C-CCCCCCcHHHHHHHcCCHHHHHHHHH--CcCCCcCCC--CCCHHHHHHHCCCHHHHHHH
Confidence            4667888888875442   2 48889999999999999999999998  788887764  68999999999999999999


Q ss_pred             HhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccC-chHHHHHHHcCChhHHHHHHhhCcccccccC
Q 003814          331 VNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDR-IELLVAVIDAGLYDVALDLIQHHPQLAMARD  409 (793)
Q Consensus       331 l~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g-~t~Lh~A~~~g~~eiv~~LL~~~~~~~~~~d  409 (793)
                      +++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.++..| .||||+|+..|+.+++++|++++++.   .|
T Consensus        81 L~~Gadvn-~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~---~d  156 (284)
T PHA02791         81 LFSGMDDS-QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST---FD  156 (284)
T ss_pred             HHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc---cc
Confidence            99998886 688889999999999999999999999999998888877 48999999999999999999877543   12


Q ss_pred             -CCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHHHHHHhcCccccccccCCCChH-
Q 003814          410 -GNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRL-  487 (793)
Q Consensus       410 -~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~-  487 (793)
                       ..|.||||+|++.|+                                  .++++.|++.     +++++.++..|.|| 
T Consensus       157 ~~~g~TpLh~Aa~~g~----------------------------------~eiv~lLL~~-----gAd~n~~d~~g~t~~  197 (284)
T PHA02791        157 LAILLSCIHITIKNGH----------------------------------VDMMILLLDY-----MTSTNTNNSLLFIPD  197 (284)
T ss_pred             cccCccHHHHHHHcCC----------------------------------HHHHHHHHHC-----CCCCCcccCCCCChH
Confidence             246777777777776                                  2555555554     55556666666665 


Q ss_pred             HHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCh
Q 003814          488 LFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHK  544 (793)
Q Consensus       488 Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~  544 (793)
                      ||+|+..|+.++|++|+++|++ ++.+|..| |+|      ++.|++++|+++.++.
T Consensus       198 L~~Aa~~~~~e~v~lLl~~Ga~-in~~~~~~-~~l------~~~e~~~~ll~~~~~~  246 (284)
T PHA02791        198 IKLAIDNKDLEMLQALFKYDIN-IYSVNLEN-VLL------DDAEIAKMIIEKHVEY  246 (284)
T ss_pred             HHHHHHcCCHHHHHHHHHCCCC-CccCcccC-ccC------CCHHHHHHHHHhhhhh
Confidence            7777777888888888888877 67777643 555      7777788877766553


No 25 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=4.4e-35  Score=336.75  Aligned_cols=279  Identities=17%  Similarity=0.182  Sum_probs=232.7

Q ss_pred             HHHHHHH---cCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHh--CcHHHHHHHHhcCCCCcccccccCCChHHHHH
Q 003814          244 PLHLAAL---KGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGA--RRTLFVQELVNLMTPEDLALRNKVGNTALCFA  318 (793)
Q Consensus       244 ~Lh~Aa~---~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~--g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~A  318 (793)
                      +||.-+.   ..+.++++.|++.+. +++..  ..|.||||.++..  ++.++|++|++  +|+++|.++ .+.||||.|
T Consensus         3 ~l~~y~~~~~~~~~~~v~~LL~~Ga-dvN~~--~~g~t~l~~~~~~~~~~~~iv~~Ll~--~GAdvn~~~-~~~tpL~~a   76 (494)
T PHA02989          3 SLYEYILYSDTVDKNALEFLLRTGF-DVNEE--YRGNSILLLYLKRKDVKIKIVKLLID--NGADVNYKG-YIETPLCAV   76 (494)
T ss_pred             HHHHHHHcCCcCcHHHHHHHHHcCC-Ccccc--cCCCCHHHHHHhcCCCChHHHHHHHH--cCCCccCCC-CCCCcHHHH
Confidence            4554333   578999999997655 56554  4689999876654  37999999999  899999887 679999999


Q ss_pred             HHhC------cHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHc---CCHHHHHHHHhcCCCC-CcccccCchHHHHHHHc
Q 003814          319 AVSG------VTKIAEVMVNKNRELPSIRGNKGATPLCMAALL---GHKEMIWYLYSVTKEE-DLKEEDRIELLVAVIDA  388 (793)
Q Consensus       319 a~~g------~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~---g~~eiv~~Ll~~gad~-n~~~~~g~t~Lh~A~~~  388 (793)
                      +.++      +.++|++|+++|++++ .++..|.||||.|+..   |+.+++++|+++|+|+ +.++..|.||||+|+..
T Consensus        77 ~~~~~~~~~~~~~iv~~Ll~~Gadin-~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~  155 (494)
T PHA02989         77 LRNREITSNKIKKIVKLLLKFGADIN-LKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLES  155 (494)
T ss_pred             HhccCcchhhHHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHh
Confidence            8754      5789999999999997 7899999999998765   6899999999999999 89999999999998865


Q ss_pred             --CChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHH
Q 003814          389 --GLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLW  466 (793)
Q Consensus       389 --g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll  466 (793)
                        ++.++++.|+++|+++....+..|.||||.|+..+..   ...                           .+++++|+
T Consensus       156 ~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~---~~~---------------------------~~iv~~Ll  205 (494)
T PHA02989        156 FSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDID---VIS---------------------------IKVIKYLI  205 (494)
T ss_pred             ccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccc---ccc---------------------------HHHHHHHH
Confidence              5889999999999997333688999999999876521   000                           36677776


Q ss_pred             HHHHhcCccccccccCCCChHHHHHHHc------CCHHHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHc
Q 003814          467 EQVLLLDDSKIGELLRKPSRLLFTAVEL------GNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYEL  540 (793)
Q Consensus       467 ~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~------g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~  540 (793)
                      ++     +++++..+..+.||||.++..      +..+++++|++ +++ ++.+|..|+||||+|+..|+.+++++|+++
T Consensus       206 ~~-----Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~ad-vn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~  278 (494)
T PHA02989        206 KK-----GVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-YIK-INKKDKKGFNPLLISAKVDNYEAFNYLLKL  278 (494)
T ss_pred             hC-----CCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-CCC-CCCCCCCCCCHHHHHHHhcCHHHHHHHHHc
Confidence            65     667777777889999987764      35778887665 688 899999999999999999999999999999


Q ss_pred             CCChhhhhhcccCCCCcHHHHHhHhCCCCc
Q 003814          541 GAHKDLIASYKDENNNNMLHLAGKLAPPDR  570 (793)
Q Consensus       541 gad~~~l~n~~D~~G~TpLHlAa~~~~~~~  570 (793)
                      |+|++.    +|..|+||||+|++.++.+.
T Consensus       279 Gadin~----~d~~G~TpL~~A~~~~~~~i  304 (494)
T PHA02989        279 GDDIYN----VSKDGDTVLTYAIKHGNIDM  304 (494)
T ss_pred             CCCccc----cCCCCCCHHHHHHHcCCHHH
Confidence            999986    99999999999999998763


No 26 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=8.2e-35  Score=327.75  Aligned_cols=247  Identities=17%  Similarity=0.176  Sum_probs=193.5

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHH
Q 003814          241 SYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAV  320 (793)
Q Consensus       241 g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~  320 (793)
                      .+++||.|+..|+.+++++|++.+. +++.+ +..|.||||+|+..|+.++|++|++  .|++++.++..|.||||.|+.
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~-~~n~~-~~~g~tpL~~A~~~~~~~~v~~Ll~--~ga~~~~~~~~~~t~L~~A~~   77 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGI-NPNFE-IYDGISPIKLAMKFRDSEAIKLLMK--HGAIPDVKYPDIESELHDAVE   77 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCC-CCCcc-CCCCCCHHHHHHHcCCHHHHHHHHh--CCCCccccCCCcccHHHHHHH
Confidence            4578888888888888888886544 33333 5678888888888888888888888  677777777778888888888


Q ss_pred             hCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCChhHHHHHHhh
Q 003814          321 SGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQH  400 (793)
Q Consensus       321 ~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~  400 (793)
                      .|+.+++++|++.|++.....+.+|.||||+|+..|+.+++++|+++|++++.++..|.||||.|+..|+.++++.|+++
T Consensus        78 ~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~  157 (413)
T PHA02875         78 EGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDH  157 (413)
T ss_pred             CCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence            88888888888887776656667788888888888888888888888888877777777788877777777777777776


Q ss_pred             CcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHHHHHHhcCccccccc
Q 003814          401 HPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGEL  480 (793)
Q Consensus       401 ~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~  480 (793)
                      ++++ +.+                                                                        
T Consensus       158 g~~~-~~~------------------------------------------------------------------------  164 (413)
T PHA02875        158 KACL-DIE------------------------------------------------------------------------  164 (413)
T ss_pred             CCCC-CCC------------------------------------------------------------------------
Confidence            6553 333                                                                        


Q ss_pred             cCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCC-CCHHHHHHHcCCHHHHHHHHHcCCChhhhhhcccCCCCcHH
Q 003814          481 LRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHS-RSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNML  559 (793)
Q Consensus       481 ~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G-~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n~~D~~G~TpL  559 (793)
                      |..|.||||+|+..|+.+++++|+++|++ ++..+..| .||+|+|+..|+.+++++|+++|+|+++. ...+.+|.|||
T Consensus       165 d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~-~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~-~~~~~~~~t~l  242 (413)
T PHA02875        165 DCCGCTPLIIAMAKGDIAICKMLLDSGAN-IDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIM-FMIEGEECTIL  242 (413)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchH-hhcCCCchHHH
Confidence            34566677777777889999999999999 67777766 58999999999999999999999999863 34688899999


Q ss_pred             HHHhHhC
Q 003814          560 HLAGKLA  566 (793)
Q Consensus       560 HlAa~~~  566 (793)
                      ++++...
T Consensus       243 ~~~~~~~  249 (413)
T PHA02875        243 DMICNMC  249 (413)
T ss_pred             HHHHhhc
Confidence            9987654


No 27 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=3.8e-35  Score=305.91  Aligned_cols=185  Identities=21%  Similarity=0.230  Sum_probs=165.4

Q ss_pred             cCCCCCchHHHHHHHcCCHHHHHHHHhcCCcccccc-------CCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccc
Q 003814          236 RNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVR-------ISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRN  308 (793)
Q Consensus       236 ~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~-------~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d  308 (793)
                      ..+.+|.|||.+||++||.++|++|+++....+...       ..-+|-+||..|+..||+++||.|++  +|+++|...
T Consensus        37 ~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~--~ga~VN~tT  114 (615)
T KOG0508|consen   37 GEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLR--RGASVNDTT  114 (615)
T ss_pred             ccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHH--hcCcccccc
Confidence            345667799999999999999999998654432211       13568899999999999999999999  789999988


Q ss_pred             cCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHc
Q 003814          309 KVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDA  388 (793)
Q Consensus       309 ~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~  388 (793)
                      ....|||--||.-|+.++||+|+++|+|+. +.|..|.|.||+||.+||.+|+++|++.|+|+|.++..|+|+||.|++.
T Consensus       115 ~TNStPLraACfDG~leivKyLvE~gad~~-IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEs  193 (615)
T KOG0508|consen  115 RTNSTPLRAACFDGHLEIVKYLVEHGADPE-IANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAES  193 (615)
T ss_pred             ccCCccHHHHHhcchhHHHHHHHHcCCCCc-ccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhc
Confidence            888999999999999999999999999997 8999999999999999999999999999999999999999999999999


Q ss_pred             CChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCC
Q 003814          389 GLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSA  425 (793)
Q Consensus       389 g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~  425 (793)
                      |++|+++.|+++++.+  ..|..|.|||..|+..|+.
T Consensus       194 G~vdivq~Ll~~ga~i--~~d~~GmtPL~~Aa~tG~~  228 (615)
T KOG0508|consen  194 GSVDIVQLLLKHGAKI--DVDGHGMTPLLLAAVTGHT  228 (615)
T ss_pred             ccHHHHHHHHhCCcee--eecCCCCchHHHHhhhcch
Confidence            9999999999999875  5788899999999999874


No 28 
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=2.6e-35  Score=271.88  Aligned_cols=176  Identities=20%  Similarity=0.166  Sum_probs=107.5

Q ss_pred             chHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHh
Q 003814          242 YAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVS  321 (793)
Q Consensus       242 ~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~  321 (793)
                      .++.+.+|+.....-++.+++..+..++.+.|.+|+||||+||..|+.++|++|++. .+..+|.+|..|+||||.|+..
T Consensus         4 ~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq-~nv~~ddkDdaGWtPlhia~s~   82 (226)
T KOG4412|consen    4 ASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQ-PNVKPDDKDDAGWTPLHIAASN   82 (226)
T ss_pred             cchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhc-CCCCCCCccccCCchhhhhhhc
Confidence            355566666655566666666555555555444666666666666666666666642 4555666666666666666666


Q ss_pred             CcHHHHHHHHhC-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCChhHHHHHHhh
Q 003814          322 GVTKIAEVMVNK-NRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQH  400 (793)
Q Consensus       322 g~~~iv~~Ll~~-g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~  400 (793)
                      |+.++|+.|+.+ |++++ ..++.|.||||+|+.+|..+++++|+++|+.++.+|..|.||||.|+.-|.++++++|+..
T Consensus        83 g~~evVk~Ll~r~~advn-a~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~  161 (226)
T KOG4412|consen   83 GNDEVVKELLNRSGADVN-ATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQ  161 (226)
T ss_pred             CcHHHHHHHhcCCCCCcc-eecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhc
Confidence            666666666666 66665 5556666666666666666666666666666666666666666666666666666666666


Q ss_pred             CcccccccCCCCCCHHHHHH
Q 003814          401 HPQLAMARDGNGETALHVLA  420 (793)
Q Consensus       401 ~~~~~~~~d~~G~TpLh~A~  420 (793)
                      ++.+ +.+|+.|+||||.|.
T Consensus       162 ~a~~-n~qDk~G~TpL~~al  180 (226)
T KOG4412|consen  162 GAPL-NTQDKYGFTPLHHAL  180 (226)
T ss_pred             CCCC-CcccccCccHHHHHH
Confidence            6553 555555555555553


No 29 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.7e-34  Score=303.72  Aligned_cols=222  Identities=12%  Similarity=0.139  Sum_probs=195.3

Q ss_pred             hCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 003814          286 ARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLY  365 (793)
Q Consensus       286 ~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll  365 (793)
                      .++.+++++|++  +|+  +.+|.+|+||||+|+..|+.+++++|+++|++++ ..  +|.||||+|+..|+.+++++|+
T Consensus         9 ~~~~~~~~~Lis--~~a--~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n-~~--d~~TpLh~Aa~~g~~eiV~lLL   81 (284)
T PHA02791          9 WKSKQLKSFLSS--KDA--FKADVHGHSALYYAIADNNVRLVCTLLNAGALKN-LL--ENEFPLHQAATLEDTKIVKILL   81 (284)
T ss_pred             cCHHHHHHHHHh--CCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCc-CC--CCCCHHHHHHHCCCHHHHHHHH
Confidence            467899999999  676  4689999999999999999999999999999876 33  4789999999999999999999


Q ss_pred             hcCCCCCcccccCchHHHHHHHcCChhHHHHHHhhCcccccccCCCCC-CHHHHHHhCCCCccccchhhHHHHhhhcCCC
Q 003814          366 SVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGE-TALHVLARKPSAFASGSQLGFWRRCIYSVPG  444 (793)
Q Consensus       366 ~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~~~~~~d~~G~-TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~  444 (793)
                      ++|++++.+|..|.||||+|+..|+.++++.|+++++++ +.++..|+ ||||+|+..|+                    
T Consensus        82 ~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadi-n~~~~~g~~TpL~~Aa~~g~--------------------  140 (284)
T PHA02791         82 FSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVMLND--------------------  140 (284)
T ss_pred             HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-CccCCCCCcHHHHHHHHcCC--------------------
Confidence            999999999999999999999999999999999999987 67788875 89999999987                    


Q ss_pred             cccccCCchhHHHHHHHHHHHHHHHHhcCcccccccc-CCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCH-H
Q 003814          445 MRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELL-RKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSM-F  522 (793)
Q Consensus       445 ~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~~-~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~-L  522 (793)
                                    .+++++|++++.     +.  .+ ..|.||||+|+..|+.+++++|+++|++ ++.+|..|.|| |
T Consensus       141 --------------~eivk~LL~~~~-----~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd-~n~~d~~g~t~~L  198 (284)
T PHA02791        141 --------------VSIVSYFLSEIP-----ST--FDLAILLSCIHITIKNGHVDMMILLLDYMTS-TNTNNSLLFIPDI  198 (284)
T ss_pred             --------------HHHHHHHHhcCC-----cc--cccccCccHHHHHHHcCCHHHHHHHHHCCCC-CCcccCCCCChHH
Confidence                          366677666421     11  12 2479999999999999999999999999 88899999987 9


Q ss_pred             HHHHHcCCHHHHHHHHHcCCChhhhhhcccCCCCcHHHHH
Q 003814          523 HIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLA  562 (793)
Q Consensus       523 h~A~~~g~~~iv~~Ll~~gad~~~l~n~~D~~G~TpLHlA  562 (793)
                      |+|+.+|+.+++++|+++|++++.    +|.+| |||+.|
T Consensus       199 ~~Aa~~~~~e~v~lLl~~Ga~in~----~~~~~-~~l~~~  233 (284)
T PHA02791        199 KLAIDNKDLEMLQALFKYDINIYS----VNLEN-VLLDDA  233 (284)
T ss_pred             HHHHHcCCHHHHHHHHHCCCCCcc----CcccC-ccCCCH
Confidence            999999999999999999999985    88854 777433


No 30 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=6.3e-34  Score=320.58  Aligned_cols=241  Identities=15%  Similarity=0.166  Sum_probs=204.2

Q ss_pred             chhhHHhhcCCCCcCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHh
Q 003814          218 AQPAVSLSQPGAVSGGVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVN  297 (793)
Q Consensus       218 ~~~l~~l~~~G~~~~~~~~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~  297 (793)
                      ...+..+++.|+   +++..+.+|.||||+|+..|+.+++++|++.+.. .+.. +..+.||||.|+..|+.++|++|++
T Consensus        15 ~~iv~~Ll~~g~---~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~   89 (413)
T PHA02875         15 LDIARRLLDIGI---NPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAI-PDVK-YPDIESELHDAVEEGDVKAVEELLD   89 (413)
T ss_pred             HHHHHHHHHCCC---CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-cccc-CCCcccHHHHHHHCCCHHHHHHHHH
Confidence            456666777777   5667788899999999999999999999987654 3333 6789999999999999999999999


Q ss_pred             cCCCCcc-cccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccc
Q 003814          298 LMTPEDL-ALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEE  376 (793)
Q Consensus       298 ~~~gad~-~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~  376 (793)
                        .|.+. +..+.+|.||||+|+..|+.+++++|+++|++++ .++..|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus        90 --~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~-~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~  166 (413)
T PHA02875         90 --LGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPD-IPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDC  166 (413)
T ss_pred             --cCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCC
Confidence              67765 4557789999999999999999999999999997 7899999999999999999999999999999999999


Q ss_pred             cCchHHHHHHHcCChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHH
Q 003814          377 DRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHL  456 (793)
Q Consensus       377 ~g~t~Lh~A~~~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~  456 (793)
                      .|.||||+|+..|+.+++++|++.|+++ +..+.+|                                            
T Consensus       167 ~g~TpL~~A~~~g~~eiv~~Ll~~ga~~-n~~~~~~--------------------------------------------  201 (413)
T PHA02875        167 CGCTPLIIAMAKGDIAICKMLLDSGANI-DYFGKNG--------------------------------------------  201 (413)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhCCCCC-CcCCCCC--------------------------------------------
Confidence            9999999999999999999999999875 3333222                                            


Q ss_pred             HHHHHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCccc---ccCCCCCHHHHHHHc---CC
Q 003814          457 QALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWK---VDDHSRSMFHIAVVH---RQ  530 (793)
Q Consensus       457 a~~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~---~d~~G~T~Lh~A~~~---g~  530 (793)
                                                 +.||+|+|+..|+.+++++|+++|++ ++.   .+..+.|||+.++..   ..
T Consensus       202 ---------------------------~~t~l~~A~~~~~~~iv~~Ll~~gad-~n~~~~~~~~~~t~l~~~~~~~~~~~  253 (413)
T PHA02875        202 ---------------------------CVAALCYAIENNKIDIVRLFIKRGAD-CNIMFMIEGEECTILDMICNMCTNLE  253 (413)
T ss_pred             ---------------------------CchHHHHHHHcCCHHHHHHHHHCCcC-cchHhhcCCCchHHHHHHHhhcCCcc
Confidence                                       24677778888889999999999999 544   367899999987643   34


Q ss_pred             HHHHHHHHH
Q 003814          531 EKIFNLIYE  539 (793)
Q Consensus       531 ~~iv~~Ll~  539 (793)
                      .+.++.++.
T Consensus       254 ~~~~~~li~  262 (413)
T PHA02875        254 SEAIDALIA  262 (413)
T ss_pred             cHHHHHHHH
Confidence            566666653


No 31 
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=3.2e-35  Score=271.27  Aligned_cols=184  Identities=26%  Similarity=0.306  Sum_probs=170.3

Q ss_pred             CcccC-CCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCC
Q 003814          233 GVERN-CFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVG  311 (793)
Q Consensus       233 ~~~~~-d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G  311 (793)
                      .++.+ |.+|+||||+||..|+.+++.+|+.+....++.+ |..|+||||+||..|+.|+|+.|+.+ .|+|+|..+..|
T Consensus        29 SL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddk-DdaGWtPlhia~s~g~~evVk~Ll~r-~~advna~tn~G  106 (226)
T KOG4412|consen   29 SLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDK-DDAGWTPLHIAASNGNDEVVKELLNR-SGADVNATTNGG  106 (226)
T ss_pred             hhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCc-cccCCchhhhhhhcCcHHHHHHHhcC-CCCCcceecCCC
Confidence            44444 4599999999999999999999998655566665 99999999999999999999999995 499999999999


Q ss_pred             ChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCCh
Q 003814          312 NTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLY  391 (793)
Q Consensus       312 ~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~  391 (793)
                      .||||+|+..|..+|+++|+++|+.+. .+|..|+||||.|+..|.++++++|+..|+.+|.+|..|+||||.|...|+.
T Consensus       107 ~T~LHyAagK~r~eIaqlLle~ga~i~-~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~  185 (226)
T KOG4412|consen  107 QTCLHYAAGKGRLEIAQLLLEKGALIR-IKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHP  185 (226)
T ss_pred             cceehhhhcCChhhHHHHHHhcCCCCc-ccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCc
Confidence            999999999999999999999998886 8999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHhhCcccccccCCCCCCHHHHHHh
Q 003814          392 DVALDLIQHHPQLAMARDGNGETALHVLAR  421 (793)
Q Consensus       392 eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~  421 (793)
                      ++...|+++|++. ...|++| ||+..|+-
T Consensus       186 d~a~lLV~~gAd~-~~edke~-t~~~~a~~  213 (226)
T KOG4412|consen  186 DVAVLLVRAGADT-DREDKEG-TALRIACN  213 (226)
T ss_pred             hHHHHHHHhccce-eeccccC-chHHHHHH
Confidence            9999999999886 7888888 99988874


No 32 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.2e-33  Score=324.58  Aligned_cols=254  Identities=16%  Similarity=0.158  Sum_probs=137.7

Q ss_pred             CHHHHHHHHhcCCccccccCCCCCchHHHHHHHh-----CcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhC---cH
Q 003814          253 DWDFARNFFNLNPEAVCVRISRNQDTALHIAAGA-----RRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSG---VT  324 (793)
Q Consensus       253 ~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~-----g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g---~~  324 (793)
                      +.++|+.|++.+. +++.. |..|.||||.|+.+     ++.+++++|++  +|+|+|.+|..|+||||+|+.++   +.
T Consensus        50 ~~~iv~~Ll~~Ga-dvn~~-d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~--~GadiN~~d~~G~TpLh~a~~~~~~~~~  125 (489)
T PHA02798         50 STDIVKLFINLGA-NVNGL-DNEYSTPLCTILSNIKDYKHMLDIVKILIE--NGADINKKNSDGETPLYCLLSNGYINNL  125 (489)
T ss_pred             CHHHHHHHHHCCC-CCCCC-CCCCCChHHHHHHhHHhHHhHHHHHHHHHH--CCCCCCCCCCCcCcHHHHHHHcCCcChH
Confidence            4555555554333 33332 45555555555432     44555555555  45555555555555555555543   45


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCC---HHHHHHHHhcCCCCCccc-ccCchHHHHHHHc----CChhHHHH
Q 003814          325 KIAEVMVNKNRELPSIRGNKGATPLCMAALLGH---KEMIWYLYSVTKEEDLKE-EDRIELLVAVIDA----GLYDVALD  396 (793)
Q Consensus       325 ~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~---~eiv~~Ll~~gad~n~~~-~~g~t~Lh~A~~~----g~~eiv~~  396 (793)
                      +++++|+++|++++ .+|.+|.||||+|++.|+   .+++++|+++|++++..+ ..|.||||.++..    ++.+++++
T Consensus       126 ~iv~~Ll~~Gadvn-~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~  204 (489)
T PHA02798        126 EILLFMIENGADTT-LLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKL  204 (489)
T ss_pred             HHHHHHHHcCCCcc-ccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHH
Confidence            55555555555554 455555555555555554   555555555555555543 3455555555432    24555555


Q ss_pred             HHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHHHHHHhcCccc
Q 003814          397 LIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSK  476 (793)
Q Consensus       397 LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~  476 (793)
                      |+++|+++ +..+..|.++++.....               +....            .....+++++++      .+.+
T Consensus       205 Li~~Ga~i-~~~~~~~~~~~~~~l~~---------------l~~~~------------~~~~~~i~~~l~------~~~d  250 (489)
T PHA02798        205 FVDNGFII-NKENKSHKKKFMEYLNS---------------LLYDN------------KRFKKNILDFIF------SYID  250 (489)
T ss_pred             HHHCCCCc-ccCCccccchHHHHHHH---------------HHhhc------------ccchHHHHHHHH------hcCC
Confidence            55555553 44444555554421110               00000            000012222221      1356


Q ss_pred             cccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCChhh
Q 003814          477 IGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDL  546 (793)
Q Consensus       477 ~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~  546 (793)
                      ++.+|..|.||||+|+..|+.+++++|+++|+| ++.+|..|+||||+|+..++.++++.|++++++++.
T Consensus       251 vN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAd-in~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~~  319 (489)
T PHA02798        251 INQVDELGFNPLYYSVSHNNRKIFEYLLQLGGD-INIITELGNTCLFTAFENESKFIFNSILNKKPNKNT  319 (489)
T ss_pred             CCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCc-ccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCHHH
Confidence            666777777777777777777777777777777 667777777777777777777777777777777664


No 33 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=3e-33  Score=321.20  Aligned_cols=281  Identities=14%  Similarity=0.166  Sum_probs=232.6

Q ss_pred             CHHHHHHHHhcCCccccccCCCCCchHHHHHHH--hCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHh-----CcHH
Q 003814          253 DWDFARNFFNLNPEAVCVRISRNQDTALHIAAG--ARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVS-----GVTK  325 (793)
Q Consensus       253 ~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~--~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~-----g~~~  325 (793)
                      ..+.|+.|++.. + ++.  ...|.|+++.+..  .++.++|++|++  +|+++|.+|..|.||||.|+.+     ++.+
T Consensus        17 ~~~~v~~ll~~~-~-~~~--~~~~~~~~~~yl~~~~~~~~iv~~Ll~--~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~   90 (489)
T PHA02798         17 KLSTVKLLIKSC-N-PNE--IVNEYSIFQKYLQRDSPSTDIVKLFIN--LGANVNGLDNEYSTPLCTILSNIKDYKHMLD   90 (489)
T ss_pred             cHHHHHHHHhcC-C-hhh--hcccchHHHHHHhCCCCCHHHHHHHHH--CCCCCCCCCCCCCChHHHHHHhHHhHHhHHH
Confidence            567999999643 2 222  2457788775544  458999999999  8999999999999999999865     7799


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCCHHHHHHHcC---CHHHHHHHHhcCCCCCcccccCchHHHHHHHcCC---hhHHHHHHh
Q 003814          326 IAEVMVNKNRELPSIRGNKGATPLCMAALLG---HKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGL---YDVALDLIQ  399 (793)
Q Consensus       326 iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g---~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~---~eiv~~LL~  399 (793)
                      ++++|+++|++++ .+|..|.||||+|+..+   +.+++++|+++|++++.+|.+|.||||+|++.++   .++++.|++
T Consensus        91 iv~~Ll~~GadiN-~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~  169 (489)
T PHA02798         91 IVKILIENGADIN-KKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLE  169 (489)
T ss_pred             HHHHHHHCCCCCC-CCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHH
Confidence            9999999999997 78999999999999976   7899999999999999999999999999999998   999999999


Q ss_pred             hCccccccc-CCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHHHHHHhcCccccc
Q 003814          400 HHPQLAMAR-DGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIG  478 (793)
Q Consensus       400 ~~~~~~~~~-d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~~~  478 (793)
                      +|+++ +.. +..|.||||.++..+....  .                            .+++++|+++     +++++
T Consensus       170 ~gadi-n~~~~~~~~t~Lh~~~~~~~~~~--~----------------------------~~ivk~Li~~-----Ga~i~  213 (489)
T PHA02798        170 KGVDI-NTHNNKEKYDTLHCYFKYNIDRI--D----------------------------ADILKLFVDN-----GFIIN  213 (489)
T ss_pred             hCCCc-ccccCcCCCcHHHHHHHhccccC--C----------------------------HHHHHHHHHC-----CCCcc
Confidence            99997 555 5679999999886531100  0                            2667777776     45555


Q ss_pred             cccCCCChHHH-------HHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhhcc
Q 003814          479 ELLRKPSRLLF-------TAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYK  551 (793)
Q Consensus       479 ~~~~~g~t~Lh-------~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n~~  551 (793)
                      ..+..|.++++       .+...++.+++++|+. ++| ++.+|..|+||||+|+..|+.+++++|+++|+|++.    +
T Consensus       214 ~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~d-vN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~----~  287 (489)
T PHA02798        214 KENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YID-INQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINI----I  287 (489)
T ss_pred             cCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCC-CCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccc----c
Confidence            66666677765       3455678889988766 588 899999999999999999999999999999999986    9


Q ss_pred             cCCCCcHHHHHhHhCCCCc--ccccCCchhHhH
Q 003814          552 DENNNNMLHLAGKLAPPDR--LKIDSGAALQLR  582 (793)
Q Consensus       552 D~~G~TpLHlAa~~~~~~~--l~l~~Ga~~~~~  582 (793)
                      |..|+||||+|++.++.+.  .+++.|++.+..
T Consensus       288 d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~~i  320 (489)
T PHA02798        288 TELGNTCLFTAFENESKFIFNSILNKKPNKNTI  320 (489)
T ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHccCCCHHHH
Confidence            9999999999999998764  456777776543


No 34 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=3.3e-33  Score=291.43  Aligned_cols=213  Identities=19%  Similarity=0.194  Sum_probs=178.1

Q ss_pred             HHHHcCCHHHHHHHHhcCCc-c---ccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccc--------cccCCChH
Q 003814          247 LAALKGDWDFARNFFNLNPE-A---VCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLAL--------RNKVGNTA  314 (793)
Q Consensus       247 ~Aa~~G~~~~v~~LL~~~~~-~---~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~--------~d~~G~Tp  314 (793)
                      -|++.|....+..|+..... .   ... ...+|.|||.+||++||.++|++|+++ .++++..        ..-+|-+|
T Consensus        10 naa~~g~l~~l~~ll~~~s~~ei~~l~~-~~~~g~tPL~iaaRnGH~~vVeyLle~-~~a~~e~~GsV~FDge~Iegapp   87 (615)
T KOG0508|consen   10 NAARDGKLQLLAKLLINSSNEEIISLIG-EVQNGGTPLLIAARNGHADVVEYLLEH-CRASPEQGGSVRFDGETIEGAPP   87 (615)
T ss_pred             HHhhhhhHHHHHHHHhCCchHHHHHHhc-cccCCCCceeeehhcCcHHHHHHHHHH-hcCCccCCceEEeCCcccCCCch
Confidence            57777777777766643221 1   111 256788999999999999999999996 4665443        34578899


Q ss_pred             HHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCChhHH
Q 003814          315 LCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVA  394 (793)
Q Consensus       315 Lh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~eiv  394 (793)
                      |..|+..||.++||.|+++|+++| .......|||--||.-||.++||+|+++|+|+++.|..|.|.||.|+.+|+.+++
T Consensus        88 LWaAsaAGHl~vVk~L~~~ga~VN-~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~  166 (615)
T KOG0508|consen   88 LWAASAAGHLEVVKLLLRRGASVN-DTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIA  166 (615)
T ss_pred             hhHHhccCcHHHHHHHHHhcCccc-cccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHH
Confidence            999999999999999999999998 4666678999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCc-ccccCCchhHHHHHHHHHHHHHHHH
Q 003814          395 LDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGM-RAILDPKLMHLQALELVKRLWEQVL  470 (793)
Q Consensus       395 ~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~-~~~~~~t~lh~a~~~~~~~Ll~~~l  470 (793)
                      ++|++.|+++ +.++..|+|+||.++..|+       +++++.|+..+..+ .+.+|.|||..++.......++.++
T Consensus       167 qyLle~gADv-n~ks~kGNTALH~caEsG~-------vdivq~Ll~~ga~i~~d~~GmtPL~~Aa~tG~~~iVe~L~  235 (615)
T KOG0508|consen  167 QYLLEQGADV-NAKSYKGNTALHDCAESGS-------VDIVQLLLKHGAKIDVDGHGMTPLLLAAVTGHTDIVERLL  235 (615)
T ss_pred             HHHHHhCCCc-chhcccCchHHHhhhhccc-------HHHHHHHHhCCceeeecCCCCchHHHHhhhcchHHHHHHh
Confidence            9999999997 9999999999999999987       89999999876654 4567899999888655444444444


No 35 
>PHA02792 ankyrin-like protein; Provisional
Probab=99.97  E-value=6.1e-31  Score=296.03  Aligned_cols=348  Identities=12%  Similarity=0.029  Sum_probs=230.2

Q ss_pred             hHHhhcCCCCcCCcccCCCCCchHHHHHHHcCCH----HHHHHHHhcCCccccccCCCCCchHHHH-HHHhCcHHHHHHH
Q 003814          221 AVSLSQPGAVSGGVERNCFTSYAPLHLAALKGDW----DFARNFFNLNPEAVCVRISRNQDTALHI-AAGARRTLFVQEL  295 (793)
Q Consensus       221 l~~l~~~G~~~~~~~~~d~~g~T~Lh~Aa~~G~~----~~v~~LL~~~~~~~~~~~d~~g~TpLh~-Aa~~g~~eiVk~L  295 (793)
                      ...+++.|+.+-.    ..+|.||||.-..+.+.    +++-.|+.. +.   . .+-+|.+|+|+ |+.+|++|+|++|
T Consensus        21 ~~~l~~~g~~~~~----~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~---~-~n~~~~~~~~~~~s~n~~lElvk~L   91 (631)
T PHA02792         21 AQSLIESGANPLY----EYDGETPLKAYVTKKNNNIKNDVVILLLSS-VD---Y-KNINDFDIFEYLCSDNIDIELLKLL   91 (631)
T ss_pred             HHHHHHcCCCccc----ccCCCccHHHHHhhhhhhHHHHHHHHHHhC-CC---c-CccCCccHHHHHHHhcccHHHHHHH
Confidence            3456777875443    25566899887555442    244444432 21   2 26677788886 4567888999999


Q ss_pred             HhcCCCCcccccccCCChHHHHHHH-hCcHHHHHHHHhCCCCCC-----------------------------------C
Q 003814          296 VNLMTPEDLALRNKVGNTALCFAAV-SGVTKIAEVMVNKNRELP-----------------------------------S  339 (793)
Q Consensus       296 L~~~~gad~~~~d~~G~TpLh~Aa~-~g~~~iv~~Ll~~g~~~~-----------------------------------~  339 (793)
                      ++  +|+|+|.++..|.||+|+|+. .++.|++++|+++|++..                                   +
T Consensus        92 I~--~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  169 (631)
T PHA02792         92 IS--KGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTD  169 (631)
T ss_pred             HH--cCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccc
Confidence            98  799999888888899899865 688999999999987632                                   1


Q ss_pred             CCCCCCCCHHHHHHHcC-------CHHHHHHHHhcCCCCCcccccCchHHHHHHHcC--ChhHHHHHHhhCcccccccCC
Q 003814          340 IRGNKGATPLCMAALLG-------HKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAG--LYDVALDLIQHHPQLAMARDG  410 (793)
Q Consensus       340 ~~~~~G~TpLh~Aa~~g-------~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g--~~eiv~~LL~~~~~~~~~~d~  410 (793)
                      ..+..|.||||+|+..+       +.|++++|+++|++++..|..|.||||+|+.+.  ..|+++.|++..-+.     .
T Consensus       170 ~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~-----~  244 (631)
T PHA02792        170 YDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSG-----N  244 (631)
T ss_pred             cCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhccccc-----c
Confidence            34455778888888777       778888888888888777777888888888777  667777777631111     1


Q ss_pred             CCCCHHHHHHhCCCCcc-ccchhhHHHHhhhcCC--Cccc----cc------------CC---chhHHH------HHHHH
Q 003814          411 NGETALHVLARKPSAFA-SGSQLGFWRRCIYSVP--GMRA----IL------------DP---KLMHLQ------ALELV  462 (793)
Q Consensus       411 ~G~TpLh~A~~~g~~~~-s~~~~~~~~~ll~~~~--~~~~----~~------------~~---t~lh~a------~~~~~  462 (793)
                      +-+..|+.-.+...... ..-...++..|+....  ++-.    ..            ..   ..||.-      ..+++
T Consensus       245 ~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiI  324 (631)
T PHA02792        245 ELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVI  324 (631)
T ss_pred             chHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHH
Confidence            11222222221111000 0112335555553322  0000    00            00   011110      13555


Q ss_pred             HHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCC--CCHHHHHHHcCCH---HHHHHH
Q 003814          463 KRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHS--RSMFHIAVVHRQE---KIFNLI  537 (793)
Q Consensus       463 ~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G--~T~Lh~A~~~g~~---~iv~~L  537 (793)
                      ++|++++.     +..  ...+..+++.|+..|+.++|++|+++|++ ++.+|.+|  .||||+|+.....   +++++|
T Consensus       325 K~LId~Ga-----~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~GAD-IN~kD~~g~~~TpLh~A~~n~~~~v~~IlklL  396 (631)
T PHA02792        325 KCMIDEGA-----TLY--RFKHINKYFQKFDNRDPKVVEYILKNGNV-VVEDDDNIINIMPLFPTLSIHESDVLSILKLC  396 (631)
T ss_pred             HHHHHCCC-----ccc--cCCcchHHHHHHHcCCHHHHHHHHHcCCc-hhhhcCCCCChhHHHHHHHhccHhHHHHHHHH
Confidence            66665533     332  12355679999999999999999999999 78888775  6999998877665   468899


Q ss_pred             HHcCCChhhhhhcccCCCCcHHHHHhHhCCCCcccccCCchhHhHHHhhhHHHHHHhhc-cchhHhhhcCCCCchhhhhh
Q 003814          538 YELGAHKDLIASYKDENNNNMLHLAGKLAPPDRLKIDSGAALQLRRELHWFKEIEKVVQ-PSYREAKNSEGRTPHILFSE  616 (793)
Q Consensus       538 l~~gad~~~l~n~~D~~G~TpLHlAa~~~~~~~l~l~~Ga~~~~~~~l~~~~~v~~ll~-~~~~~~~n~~G~Tpl~la~e  616 (793)
                      +++|+|++.    +|..|+||||+|+..++.+                    .++.++. +++++.+|..|+||+++|..
T Consensus       397 Is~GADIN~----kD~~G~TPLh~Aa~~~n~e--------------------ivelLLs~GADIN~kD~~G~TpL~~A~~  452 (631)
T PHA02792        397 KPYIDDINK----IDKHGRSILYYCIESHSVS--------------------LVEWLIDNGADINITTKYGSTCIGICVI  452 (631)
T ss_pred             HhcCCcccc----ccccCcchHHHHHHcCCHH--------------------HHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            999999985    9999999999999887643                    2333333 45668999999999999875


No 36 
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97  E-value=2.9e-30  Score=281.70  Aligned_cols=211  Identities=25%  Similarity=0.287  Sum_probs=141.1

Q ss_pred             chHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcC
Q 003814          277 DTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLG  356 (793)
Q Consensus       277 ~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g  356 (793)
                      .+-++.|++.|.++-|+.|++. .|.+++..|.+|.|+||+|+.+++.+++++|+++|++++..-..-+.||||+|+++|
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~-~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G  123 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVES-EGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNG  123 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhh-cCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcC
Confidence            3556677777777777777772 277777777777777777777777777777777777776544466777777777777


Q ss_pred             CHHHHHHHHhcCCCCCcccccCchHHHHHHHcCChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHH
Q 003814          357 HKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWR  436 (793)
Q Consensus       357 ~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~  436 (793)
                      +..+|++|+++|||++.+|.+|.+|+|.|++.|+.-++-+||.++.+. +.+|.+|+||||+|+.+|+            
T Consensus       124 ~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~-d~~D~~grTpLmwAaykg~------------  190 (600)
T KOG0509|consen  124 HISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADI-DLRDNNGRTPLMWAAYKGF------------  190 (600)
T ss_pred             cHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccC-CCcCCCCCCHHHHHHHhcc------------
Confidence            777777777777777777777777777777777777777777766553 6666666666666666553            


Q ss_pred             HhhhcCCCcccccCCchhHHHHHHHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccC
Q 003814          437 RCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDD  516 (793)
Q Consensus       437 ~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~  516 (793)
                                                                                  ...++.|++-++...-..|.
T Consensus       191 ------------------------------------------------------------~~~v~~LL~f~a~~~~~d~~  210 (600)
T KOG0509|consen  191 ------------------------------------------------------------ALFVRRLLKFGASLLLTDDN  210 (600)
T ss_pred             ------------------------------------------------------------cHHHHHHHHhcccccccccc
Confidence                                                                        22245556666663223336


Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhhcccCCCCcHHHHHhHh
Q 003814          517 HSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKL  565 (793)
Q Consensus       517 ~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n~~D~~G~TpLHlAa~~  565 (793)
                      .|.||||+|+..|+.+++++|++-|++.+.    +|.+|.||+.+|.++
T Consensus       211 ~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~----~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  211 HGNTPLHWAVVGGNLTAVKLLLEGGADLDK----TNTNGKTPFDLAQER  255 (600)
T ss_pred             cCCchHHHHHhcCCcceEehhhhcCCcccc----cccCCCCHHHHHHHh
Confidence            666666666666666666655555566554    666666666666554


No 37 
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.96  E-value=1.3e-29  Score=276.69  Aligned_cols=178  Identities=23%  Similarity=0.325  Sum_probs=162.2

Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccc-cCCChHHHHHHHh
Q 003814          243 APLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRN-KVGNTALCFAAVS  321 (793)
Q Consensus       243 T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d-~~G~TpLh~Aa~~  321 (793)
                      +-++.|++.|+.+.|+.+++..+..++.. |.+|-|+||+||.+++++++++|++  +|+++|..+ .-|.||||+|+++
T Consensus        46 ~~~v~A~q~G~l~~v~~lve~~g~~v~~~-D~~g~tlLHWAAiNNrl~v~r~li~--~gadvn~~gG~l~stPLHWAar~  122 (600)
T KOG0509|consen   46 DDIVKATQYGELETVKELVESEGESVNNP-DREGVTLLHWAAINNRLDVARYLIS--HGADVNAIGGVLGSTPLHWAARN  122 (600)
T ss_pred             hhhhhHhhcchHHHHHHHHhhcCcCCCCC-CcCCccceeHHHHcCcHHHHHHHHH--cCCCccccCCCCCCCcchHHHHc
Confidence            57889999999999999999866666665 8899999999999999999999999  899999998 6789999999999


Q ss_pred             CcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCChhHHHHHHhhC
Q 003814          322 GVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHH  401 (793)
Q Consensus       322 g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~  401 (793)
                      |+..+|++|+++|+++. .+|.+|.||||+|++.||.-.|-+|+.+|+|+|.+|.+|+||||+|+.+|+...+..|++.+
T Consensus       123 G~~~vv~lLlqhGAdpt-~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~  201 (600)
T KOG0509|consen  123 GHISVVDLLLQHGADPT-LKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFG  201 (600)
T ss_pred             CcHHHHHHHHHcCCCCc-eecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhc
Confidence            99999999999999997 89999999999999999999999999999999999999999999999999998899999999


Q ss_pred             cccccccCCCCCCHHHHHHhCCC
Q 003814          402 PQLAMARDGNGETALHVLARKPS  424 (793)
Q Consensus       402 ~~~~~~~d~~G~TpLh~A~~~g~  424 (793)
                      +.+.-..|..|.||||+|+..|+
T Consensus       202 a~~~~~d~~~g~TpLHwa~~~gN  224 (600)
T KOG0509|consen  202 ASLLLTDDNHGNTPLHWAVVGGN  224 (600)
T ss_pred             ccccccccccCCchHHHHHhcCC
Confidence            88744444677777777766655


No 38 
>PHA02792 ankyrin-like protein; Provisional
Probab=99.96  E-value=3e-28  Score=274.35  Aligned_cols=308  Identities=10%  Similarity=0.108  Sum_probs=232.3

Q ss_pred             CcccCCCCCchHHHH-HHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHH-hCcHHHHHHHHhcCCCCc-------
Q 003814          233 GVERNCFTSYAPLHL-AALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAG-ARRTLFVQELVNLMTPED-------  303 (793)
Q Consensus       233 ~~~~~d~~g~T~Lh~-Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~-~g~~eiVk~LL~~~~gad-------  303 (793)
                      ..+..+.+|.+|+|+ |+.+|+.|+|++|+++ +.+++.+ +..|.||||+|+. .|+.|+|++|++  +|++       
T Consensus        63 ~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~-GAdvN~~-~n~~~~~l~ya~~~~~~~eivk~Ll~--~Gad~~~~~~~  138 (631)
T PHA02792         63 SVDYKNINDFDIFEYLCSDNIDIELLKLLISK-GLEINSI-KNGINIVEKYATTSNPNVDVFKLLLD--KGIPTCSNIQY  138 (631)
T ss_pred             CCCcCccCCccHHHHHHHhcccHHHHHHHHHc-CCCcccc-cCCCCcceeEeecCCCChHHHHHHHH--CCCCccccccc
Confidence            445566667779985 5568999999999986 5567665 6678999999966 699999999999  6765       


Q ss_pred             -----------------------------ccccccCCChHHHHHHHhC-------cHHHHHHHHhCCCCCCCCCCCCCCC
Q 003814          304 -----------------------------LALRNKVGNTALCFAAVSG-------VTKIAEVMVNKNRELPSIRGNKGAT  347 (793)
Q Consensus       304 -----------------------------~~~~d~~G~TpLh~Aa~~g-------~~~iv~~Ll~~g~~~~~~~~~~G~T  347 (793)
                                                   +|.+|..|.||||+|+.++       +.|++++|+++|++++ ..|..|.|
T Consensus       139 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~-~~d~~g~t  217 (631)
T PHA02792        139 GYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMR-YYTYREHT  217 (631)
T ss_pred             CcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcC-ccCCCCCh
Confidence                                         2355677999999999999       8999999999999997 68889999


Q ss_pred             HHHHHHHcC--CHHHHHHHHhcCCCCCcccccCchHHHHHHH--c----CCh--hHHHHHHhhCc--ccccc---cCCC-
Q 003814          348 PLCMAALLG--HKEMIWYLYSVTKEEDLKEEDRIELLVAVID--A----GLY--DVALDLIQHHP--QLAMA---RDGN-  411 (793)
Q Consensus       348 pLh~Aa~~g--~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~--~----g~~--eiv~~LL~~~~--~~~~~---~d~~-  411 (793)
                      |||+|+.+.  +.|++++|++. +...   .+....|+.-.+  .    ++.  .+|..|++.+.  ++...   .+.+ 
T Consensus       218 ~l~~~~~~~~i~~ei~~~L~~~-~~~~---~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~  293 (631)
T PHA02792        218 TLYYYVDKCDIKREIFDALFDS-NYSG---NELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNI  293 (631)
T ss_pred             HHHHHHHcccchHHHHHHHHhc-cccc---cchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhh
Confidence            999999999  89999999984 2111   112233332222  1    123  48888888664  22111   1111 


Q ss_pred             ------------CCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHH----HHHHHHHHHHHHhcCcc
Q 003814          412 ------------GETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQA----LELVKRLWEQVLLLDDS  475 (793)
Q Consensus       412 ------------G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~----~~~~~~Ll~~~l~~~~~  475 (793)
                                  =+-.||.-...+.     -..++++.++..+...........++.++    .+++++|+++     |+
T Consensus       294 ~~~~~~~~~~~~~q~~l~~Yl~~~~-----v~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~-----GA  363 (631)
T PHA02792        294 IISSILKRYTDSIQDLLSEYVSYHT-----VYINVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKN-----GN  363 (631)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHhcCC-----ccHHHHHHHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHc-----CC
Confidence                        0112344344332     25788888888888765434455666665    4677777665     77


Q ss_pred             ccccccCCC--ChHHHHHHHcCCH---HHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhhc
Q 003814          476 KIGELLRKP--SRLLFTAVELGNV---EFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASY  550 (793)
Q Consensus       476 ~~~~~~~~g--~t~Lh~Aa~~g~~---eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n~  550 (793)
                      +++.+|..|  .||||.|+.....   +++++|+++|++ ++.+|..|+||||+|+..++.+++++|+++|++++.    
T Consensus       364 DIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GAD-IN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~----  438 (631)
T PHA02792        364 VVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDD-INKIDKHGRSILYYCIESHSVSLVEWLIDNGADINI----  438 (631)
T ss_pred             chhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCc-cccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCC----
Confidence            788877764  6999998877664   468899999999 899999999999999999999999999999999986    


Q ss_pred             ccCCCCcHHHHHhH
Q 003814          551 KDENNNNMLHLAGK  564 (793)
Q Consensus       551 ~D~~G~TpLHlAa~  564 (793)
                      +|..|+||||+|+.
T Consensus       439 kD~~G~TpL~~A~~  452 (631)
T PHA02792        439 TTKYGSTCIGICVI  452 (631)
T ss_pred             cCCCCCCHHHHHHH
Confidence            99999999999986


No 39 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.95  E-value=2.8e-27  Score=240.05  Aligned_cols=176  Identities=12%  Similarity=0.090  Sum_probs=157.9

Q ss_pred             CCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhC--cHHHHHHHHhcCCCCcccccc-cCCChHH
Q 003814          239 FTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGAR--RTLFVQELVNLMTPEDLALRN-KVGNTAL  315 (793)
Q Consensus       239 ~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g--~~eiVk~LL~~~~gad~~~~d-~~G~TpL  315 (793)
                      ..++||||.|+..|+.++|+.|++.    .+. .|..|.||||+|+..+  +.+++++|++  +|++++.++ ..|.|||
T Consensus        19 ~~~~~pL~~A~~~~~~~~vk~Li~~----~n~-~~~~g~TpLh~a~~~~~~~~eiv~~Ll~--~gadvn~~~~~~g~TpL   91 (209)
T PHA02859         19 YRYCNPLFYYVEKDDIEGVKKWIKF----VND-CNDLYETPIFSCLEKDKVNVEILKFLIE--NGADVNFKTRDNNLSAL   91 (209)
T ss_pred             hccCcHHHHHHHhCcHHHHHHHHHh----hhc-cCccCCCHHHHHHHcCCCCHHHHHHHHH--CCCCCCccCCCCCCCHH
Confidence            3457999999999999999999964    223 3889999999999865  8999999999  899999997 4899999


Q ss_pred             HHHHHh---CcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHH--cCCHHHHHHHHhcCCCCCcccccCchHHHH-HHHcC
Q 003814          316 CFAAVS---GVTKIAEVMVNKNRELPSIRGNKGATPLCMAAL--LGHKEMIWYLYSVTKEEDLKEEDRIELLVA-VIDAG  389 (793)
Q Consensus       316 h~Aa~~---g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~--~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~-A~~~g  389 (793)
                      |+|+..   ++.+++++|+++|++++ .+|..|.||||+|+.  .++.+++++|+++|++++.+|.+|.||||. |+..+
T Consensus        92 h~a~~~~~~~~~eiv~~Ll~~gadin-~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~  170 (209)
T PHA02859         92 HHYLSFNKNVEPEILKILIDSGSSIT-EEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHS  170 (209)
T ss_pred             HHHHHhCccccHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcC
Confidence            998864   47999999999999997 789999999999986  468999999999999999999999999995 56788


Q ss_pred             ChhHHHHHHhhCcccccccCCCCCCHHHHHHhCC
Q 003814          390 LYDVALDLIQHHPQLAMARDGNGETALHVLARKP  423 (793)
Q Consensus       390 ~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g  423 (793)
                      +.+++++|++.|+++ +.+|..|+||||+|..++
T Consensus       171 ~~~iv~~Ll~~Gadi-~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        171 DKKIFDFLTSLGIDI-NETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             CHHHHHHHHHcCCCC-CCCCCCCCCHHHHHhhhh
Confidence            999999999999986 899999999999999764


No 40 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.95  E-value=1.9e-26  Score=233.97  Aligned_cols=178  Identities=13%  Similarity=0.125  Sum_probs=115.1

Q ss_pred             CCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhC--cHHHHHHHHhCCCCCCCCCCCCCCCHHHH
Q 003814          274 RNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSG--VTKIAEVMVNKNRELPSIRGNKGATPLCM  351 (793)
Q Consensus       274 ~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g--~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~  351 (793)
                      ..+.||||.|+..|+.++|+.|++  .   ++..|..|.||||+|+..+  +.+++++|+++|++++...+..|.||||+
T Consensus        19 ~~~~~pL~~A~~~~~~~~vk~Li~--~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~   93 (209)
T PHA02859         19 YRYCNPLFYYVEKDDIEGVKKWIK--F---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHH   93 (209)
T ss_pred             hccCcHHHHHHHhCcHHHHHHHHH--h---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHH
Confidence            455666666666666666666665  2   3455666666666666543  56666666666666653222456666666


Q ss_pred             HHHc---CCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccc
Q 003814          352 AALL---GHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFAS  428 (793)
Q Consensus       352 Aa~~---g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s  428 (793)
                      |+..   ++.+++++|+++|++++                                  .+|..|.||||.|+..      
T Consensus        94 a~~~~~~~~~eiv~~Ll~~gadin----------------------------------~~d~~G~TpLh~a~~~------  133 (209)
T PHA02859         94 YLSFNKNVEPEILKILIDSGSSIT----------------------------------EEDEDGKNLLHMYMCN------  133 (209)
T ss_pred             HHHhCccccHHHHHHHHHCCCCCC----------------------------------CcCCCCCCHHHHHHHh------
Confidence            5542   34556666655555544                                  4455555555554431      


Q ss_pred             cchhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCC
Q 003814          429 GSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYP  508 (793)
Q Consensus       429 ~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~  508 (793)
                                                                                      ..++.+++++|+++|+
T Consensus       134 ----------------------------------------------------------------~~~~~~iv~~Li~~ga  149 (209)
T PHA02859        134 ----------------------------------------------------------------FNVRINVIKLLIDSGV  149 (209)
T ss_pred             ----------------------------------------------------------------ccCCHHHHHHHHHcCC
Confidence                                                                            1245677788888887


Q ss_pred             CCcccccCCCCCHHHH-HHHcCCHHHHHHHHHcCCChhhhhhcccCCCCcHHHHHhHh
Q 003814          509 NLIWKVDDHSRSMFHI-AVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGKL  565 (793)
Q Consensus       509 d~~~~~d~~G~T~Lh~-A~~~g~~~iv~~Ll~~gad~~~l~n~~D~~G~TpLHlAa~~  565 (793)
                      + ++.+|..|.||||. |+..++.+++++|+++|++++.    +|..|+||||+|...
T Consensus       150 d-in~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~----~d~~g~tpl~la~~~  202 (209)
T PHA02859        150 S-FLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINE----TNKSGYNCYDLIKFR  202 (209)
T ss_pred             C-cccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCC----CCCCCCCHHHHHhhh
Confidence            7 67778888888885 4556778888888888888775    788888888888754


No 41 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94  E-value=5.7e-26  Score=247.66  Aligned_cols=205  Identities=13%  Similarity=0.008  Sum_probs=111.2

Q ss_pred             HHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCC-----CCCCCCCCCHHHHHHH--cCCHHHHHHHH
Q 003814          293 QELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELP-----SIRGNKGATPLCMAAL--LGHKEMIWYLY  365 (793)
Q Consensus       293 k~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~-----~~~~~~G~TpLh~Aa~--~g~~eiv~~Ll  365 (793)
                      ++++.  +|+++|.++.+|     +|+..+..|++++|+.+|++++     -.++..++|+||+|+.  .|+.++|++|+
T Consensus        66 ~~~~~--~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI  138 (437)
T PHA02795         66 DYFRI--HRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMV  138 (437)
T ss_pred             HHHHH--cCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHH
Confidence            34444  455555555444     5555555555555555555543     0134445555555555  55555555555


Q ss_pred             hcCCCCCcccccCchHHHHHHHcCChhHHHHHHhhCccccccc-----CCCCCCHHHHHHhCCCCccccchhhHHHHhhh
Q 003814          366 SVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMAR-----DGNGETALHVLARKPSAFASGSQLGFWRRCIY  440 (793)
Q Consensus       366 ~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~~~~~~-----d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~  440 (793)
                      ++|||++..  ++.||+|.|+..++.+++++|+++|++..+..     +..|.||+|.|+..++                
T Consensus       139 ~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~----------------  200 (437)
T PHA02795        139 DHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTV----------------  200 (437)
T ss_pred             HCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCH----------------
Confidence            555555542  23455555555555555555555554321111     1123344444444332                


Q ss_pred             cCCCcccccCCchhHHHHHHHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCC
Q 003814          441 SVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRS  520 (793)
Q Consensus       441 ~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T  520 (793)
                                        .++++.|+++     +++++.++..|.||||+|+..|+.+++++|+++|++ ++.+|..|+|
T Consensus       201 ------------------~eIve~LIs~-----GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAd-IN~~d~~G~T  256 (437)
T PHA02795        201 ------------------LEIYKLCIPY-----IEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGAN-VNAVMSNGYT  256 (437)
T ss_pred             ------------------HHHHHHHHhC-----cCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCC
Confidence                              2344443332     444555555566666666666666777777777776 6666777777


Q ss_pred             HHHHHHHcC--------CHHHHHHHHHcCCChhh
Q 003814          521 MFHIAVVHR--------QEKIFNLIYELGAHKDL  546 (793)
Q Consensus       521 ~Lh~A~~~g--------~~~iv~~Ll~~gad~~~  546 (793)
                      |||+|+..|        +.+++++|+++|++++.
T Consensus       257 pLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~  290 (437)
T PHA02795        257 CLDVAVDRGSVIARRETHLKILEILLREPLSIDC  290 (437)
T ss_pred             HHHHHHHcCCcccccccHHHHHHHHHhCCCCCCc
Confidence            777777666        34677777777766654


No 42 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.93  E-value=7.7e-24  Score=255.34  Aligned_cols=254  Identities=18%  Similarity=0.099  Sum_probs=186.7

Q ss_pred             CCCchHHHHHHHcCCHHHHHHHHhcC-CccccccCCCCCchHHH-HHHHhCcHHHHHHHHhcCCCCcccccccCCChHHH
Q 003814          239 FTSYAPLHLAALKGDWDFARNFFNLN-PEAVCVRISRNQDTALH-IAAGARRTLFVQELVNLMTPEDLALRNKVGNTALC  316 (793)
Q Consensus       239 ~~g~T~Lh~Aa~~G~~~~v~~LL~~~-~~~~~~~~d~~g~TpLh-~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh  316 (793)
                      ..++.+++.||+.|+.+.++.+++.. +.+++. .|..|+|||| .|+.+++.++++.|++  .|+    .+..|+||||
T Consensus        15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~-~d~~G~t~Lh~~A~~~~~~eiv~lLl~--~g~----~~~~G~T~Lh   87 (743)
T TIGR00870        15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINC-PDRLGRSALFVAAIENENLELTELLLN--LSC----RGAVGDTLLH   87 (743)
T ss_pred             CHHHHHHHHHHHcCCHHHHHHHhccccccCCCC-cCccchhHHHHHHHhcChHHHHHHHHh--CCC----CCCcChHHHH
Confidence            34578999999999999999999763 334444 3889999999 8999999999999999  565    6788999999


Q ss_pred             HHHHh---CcHHHHHHHHhCCCCC---------CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccc---------
Q 003814          317 FAAVS---GVTKIAEVMVNKNREL---------PSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKE---------  375 (793)
Q Consensus       317 ~Aa~~---g~~~iv~~Ll~~g~~~---------~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~---------  375 (793)
                      .|+.+   +..++++.+.+.+.+.         ....+..|.||||+|+.+|+.++|++|+++|++++.++         
T Consensus        88 ~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~  167 (743)
T TIGR00870        88 AISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQ  167 (743)
T ss_pred             HHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCC
Confidence            99973   2334555555554321         11124569999999999999999999999999998653         


Q ss_pred             -----ccCchHHHHHHHcCChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccC
Q 003814          376 -----EDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILD  450 (793)
Q Consensus       376 -----~~g~t~Lh~A~~~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~  450 (793)
                           ..|.||||.|+..|+.+++++|+++++++ +.+|..|+||||+|+..+...                        
T Consensus       168 ~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadi-n~~d~~g~T~Lh~A~~~~~~~------------------------  222 (743)
T TIGR00870       168 GVDSFYHGESPLNAAACLGSPSIVALLSEDPADI-LTADSLGNTLLHLLVMENEFK------------------------  222 (743)
T ss_pred             CCCcccccccHHHHHHHhCCHHHHHHHhcCCcch-hhHhhhhhHHHHHHHhhhhhh------------------------
Confidence                 24889999999999999999999988875 788899999999998765210                        


Q ss_pred             CchhHHHHHHHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCC---CcccccCCCCCHHHHHHH
Q 003814          451 PKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPN---LIWKVDDHSRSMFHIAVV  527 (793)
Q Consensus       451 ~t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d---~~~~~d~~G~T~Lh~A~~  527 (793)
                        .      +                        .+.+.    ....+.+..+++.+.+   ..+..|.+|.||||+|+.
T Consensus       223 --~------~------------------------~~~l~----~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~  266 (743)
T TIGR00870       223 --A------E------------------------YEELS----CQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAK  266 (743)
T ss_pred             --H------H------------------------HHHHH----HHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhh
Confidence              0      0                        00000    0011122222222222   114568899999999999


Q ss_pred             cCCHHHHHHHHHcCCChhhhhhcccCCCCcHHHHHhH
Q 003814          528 HRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGK  564 (793)
Q Consensus       528 ~g~~~iv~~Ll~~gad~~~l~n~~D~~G~TpLHlAa~  564 (793)
                      .|+.+++++|++.+.+..    ......+.|.+++..
T Consensus       267 ~g~~~l~~lLL~~~~~~k----k~~a~~~~~~~~~~~  299 (743)
T TIGR00870       267 EGRIVLFRLKLAIKYKQK----KFVAWPNGQQLLSLY  299 (743)
T ss_pred             cCCccHHHHHHHHHHhcc----eeeccCcchHhHhhh
Confidence            999999999998765533    246678888888765


No 43 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.93  E-value=1.6e-26  Score=259.48  Aligned_cols=306  Identities=20%  Similarity=0.223  Sum_probs=263.8

Q ss_pred             chhhHHhhcCCCCcCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHh
Q 003814          218 AQPAVSLSQPGAVSGGVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVN  297 (793)
Q Consensus       218 ~~~l~~l~~~G~~~~~~~~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~  297 (793)
                      .+..-+++..|+   ++..+|+.|.+||.+|+-.||..+|+.|+..+. ++....|+.++|+|-+||..|..++|+.||.
T Consensus       770 ~e~vellv~rga---niehrdkkgf~plImaatagh~tvV~~llk~ha-~veaQsdrtkdt~lSlacsggr~~vvelLl~  845 (2131)
T KOG4369|consen  770 REEVELLVVRGA---NIEHRDKKGFVPLIMAATAGHITVVQDLLKAHA-DVEAQSDRTKDTMLSLACSGGRTRVVELLLN  845 (2131)
T ss_pred             HHHHHHHHHhcc---cccccccccchhhhhhcccCchHHHHHHHhhhh-hhhhhcccccCceEEEecCCCcchHHHHHHH
Confidence            345555566666   677899999999999999999999999997655 4555669999999999999999999999999


Q ss_pred             cCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcc-c
Q 003814          298 LMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIR-GNKGATPLCMAALLGHKEMIWYLYSVTKEEDLK-E  375 (793)
Q Consensus       298 ~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~-~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~-~  375 (793)
                        .|++-..++....|||.+|...|..++++.|+.+|++++... .+.|-.||++|..+||.+.++.|++.|.|+|.. .
T Consensus       846 --~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIe  923 (2131)
T KOG4369|consen  846 --AGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIE  923 (2131)
T ss_pred             --hhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccc
Confidence              799988999999999999999999999999999999998544 456899999999999999999999999999876 5


Q ss_pred             ccCchHHHHHHHcCChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhH
Q 003814          376 EDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMH  455 (793)
Q Consensus       376 ~~g~t~Lh~A~~~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh  455 (793)
                      .+.+|+|-+|+..|+.|++..||...+++ ..+-+.|.|||+-++..|..                              
T Consensus       924 TNrnTaltla~fqgr~evv~lLLa~~anv-ehRaktgltplme~AsgGyv------------------------------  972 (2131)
T KOG4369|consen  924 TNRNTALTLALFQGRPEVVFLLLAAQANV-EHRAKTGLTPLMEMASGGYV------------------------------  972 (2131)
T ss_pred             cccccceeeccccCcchHHHHHHHHhhhh-hhhcccCCcccchhhcCCcc------------------------------
Confidence            57789999999999999999999999886 78889999999999988862                              


Q ss_pred             HHHHHHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHH
Q 003814          456 LQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFN  535 (793)
Q Consensus       456 ~a~~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~  535 (793)
                          ++-+.|+..+.+.+...+   -.+..|+|-+++..||...|+.|+...+. +..++++|.|+|-+|+..|+...+.
T Consensus       973 ----dvg~~li~~gad~nasPv---p~T~dtalti~a~kGh~kfv~~lln~~at-v~v~NkkG~T~Lwla~~Gg~lss~~ 1044 (2131)
T KOG4369|consen  973 ----DVGNLLIAAGADTNASPV---PNTWDTALTIPANKGHTKFVPKLLNGDAT-VRVPNKKGCTVLWLASAGGALSSCP 1044 (2131)
T ss_pred             ----ccchhhhhcccccccCCC---CCcCCccceeecCCCchhhhHHhhCCccc-eecccCCCCcccchhccCCccccch
Confidence                444555555443332222   23445889999999999999999998888 8899999999999999999999999


Q ss_pred             HHHHcCCChhhhhhcccCCCCcHHHHHhHhCCCCccc
Q 003814          536 LIYELGAHKDLIASYKDENNNNMLHLAGKLAPPDRLK  572 (793)
Q Consensus       536 ~Ll~~gad~~~l~n~~D~~G~TpLHlAa~~~~~~~l~  572 (793)
                      +|+++++|++.    +|+.-+|+++-|.+.|+.++++
T Consensus      1045 il~~~~ad~d~----qdnr~~S~~maafRKgh~~iVk 1077 (2131)
T KOG4369|consen 1045 ILVSSVADADQ----QDNRTNSRTMAAFRKGHFAIVK 1077 (2131)
T ss_pred             HHhhcccChhh----hhcccccccHHHHHhchhheec
Confidence            99999999986    9999999999999999987654


No 44 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.93  E-value=4.9e-25  Score=240.37  Aligned_cols=187  Identities=14%  Similarity=-0.010  Sum_probs=147.7

Q ss_pred             hhcCCCCcCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCccc-----cccCCCCCchHHHHHHH--hCcHHHHHHHH
Q 003814          224 LSQPGAVSGGVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAV-----CVRISRNQDTALHIAAG--ARRTLFVQELV  296 (793)
Q Consensus       224 l~~~G~~~~~~~~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~-----~~~~d~~g~TpLh~Aa~--~g~~eiVk~LL  296 (793)
                      ...+|.   ++|.+..+|     +|+..+..|+++.|+.++....     .. .+..++|+||+|+.  .|+.++|++|+
T Consensus        68 ~~~~~~---~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~-~~~~~~~~L~~~~~n~~n~~eiV~~LI  138 (437)
T PHA02795         68 FRIHRD---NIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIK-NCNSVQDLLLYYLSNAYVEIDIVDFMV  138 (437)
T ss_pred             HHHcCc---chhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhh-ccccccHHHHHHHHhcCCCHHHHHHHH
Confidence            445566   555566555     8888888888888887655422     13 36778899999888  88889999998


Q ss_pred             hcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCC-----CCCCCCHHHHHHHcCCHHHHHHHHhcCCCC
Q 003814          297 NLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIR-----GNKGATPLCMAALLGHKEMIWYLYSVTKEE  371 (793)
Q Consensus       297 ~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~-----~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~  371 (793)
                      +  +|+|++.+  ++.||||.|+..|+.+++++|+++|++..+..     +..|.||+|.|+..++.+++++|+++|+++
T Consensus       139 ~--~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADI  214 (437)
T PHA02795        139 D--HGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDI  214 (437)
T ss_pred             H--CCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCc
Confidence            8  78888874  45789999888888999999998887543222     134778888888888889999999999988


Q ss_pred             CcccccCchHHHHHHHcCChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCC
Q 003814          372 DLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPS  424 (793)
Q Consensus       372 n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~  424 (793)
                      |.+|..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+..|+
T Consensus       215 N~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdI-N~~d~~G~TpLh~Aa~~g~  266 (437)
T PHA02795        215 NQLDAGGRTLLYRAIYAGYIDLVSWLLENGANV-NAVMSNGYTCLDVAVDRGS  266 (437)
T ss_pred             CcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCC
Confidence            888888899999999888889999999888886 7888888888888887764


No 45 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.92  E-value=3e-25  Score=244.49  Aligned_cols=248  Identities=20%  Similarity=0.222  Sum_probs=206.7

Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCC------------ccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccC
Q 003814          243 APLHLAALKGDWDFARNFFNLNP------------EAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKV  310 (793)
Q Consensus       243 T~Lh~Aa~~G~~~~v~~LL~~~~------------~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~  310 (793)
                      +=|.-|++.|+.+.+..||+...            +..+. +|.+|.|+||.||.+|+.++++.|++  +.+.++..|..
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~-qd~~gfTalhha~Lng~~~is~llle--~ea~ldl~d~k   81 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNL-QDYSGFTLLHHAVLNGQNQISKLLLD--YEALLDLCDTK   81 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccc-cCccchhHHHHHHhcCchHHHHHHhc--chhhhhhhhcc
Confidence            45778999999999999997532            12333 48899999999999999999999999  78888999999


Q ss_pred             CChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCC
Q 003814          311 GNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGL  390 (793)
Q Consensus       311 G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~  390 (793)
                      |.+|||+|++.|+.++|++|+.++..++ ..+..|.||||.|++.||.+++.+|+++|+|+-.+++.+.|+|.+|++-|.
T Consensus        82 g~~plhlaaw~g~~e~vkmll~q~d~~n-a~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr  160 (854)
T KOG0507|consen   82 GILPLHLAAWNGNLEIVKMLLLQTDILN-AVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGR  160 (854)
T ss_pred             CcceEEehhhcCcchHHHHHHhcccCCC-cccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhh
Confidence            9999999999999999999999996665 789999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHHHHHH
Q 003814          391 YDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVL  470 (793)
Q Consensus       391 ~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l  470 (793)
                      .++++.|++..-..  ..+    +      ..                                                
T Consensus       161 ~~Vvq~ll~~~~~~--~~~----~------~~------------------------------------------------  180 (854)
T KOG0507|consen  161 AEVVQMLLQKKFPV--QSS----L------RV------------------------------------------------  180 (854)
T ss_pred             hHHHHHHhhhccch--hhc----c------cC------------------------------------------------
Confidence            99999999872211  110    0      00                                                


Q ss_pred             hcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhhc
Q 003814          471 LLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASY  550 (793)
Q Consensus       471 ~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n~  550 (793)
                         +  -..++-.+.+|||.|+++||.++++.|++.|-+ +|.....| |+||.|+..|..++|.+|++.|.+..+    
T Consensus       181 ---~--~~~~~~~~~~plHlaakngh~~~~~~ll~ag~d-in~~t~~g-talheaalcgk~evvr~ll~~gin~h~----  249 (854)
T KOG0507|consen  181 ---G--DIKRPFPAIYPLHLAAKNGHVECMQALLEAGFD-INYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHI----  249 (854)
T ss_pred             ---C--CCCCCCCCcCCcchhhhcchHHHHHHHHhcCCC-cccccccc-hhhhhHhhcCcchhhhHHHhhcccccc----
Confidence               0  112233567789999999999999999999988 77766666 899999999999999999998888875    


Q ss_pred             ccCCCCcHHHHHhHh
Q 003814          551 KDENNNNMLHLAGKL  565 (793)
Q Consensus       551 ~D~~G~TpLHlAa~~  565 (793)
                      +|.+|+|+|.+-...
T Consensus       250 ~n~~~qtaldil~d~  264 (854)
T KOG0507|consen  250 KNQHGQTALDIIIDL  264 (854)
T ss_pred             ccccchHHHHHHHhc
Confidence            888999998877643


No 46 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.92  E-value=3.4e-25  Score=210.75  Aligned_cols=235  Identities=21%  Similarity=0.190  Sum_probs=202.9

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHH
Q 003814          241 SYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAV  320 (793)
Q Consensus       241 g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~  320 (793)
                      |..-+-.+.+.|+.+++...+.-.+..+... +++|+.++|.|+-.|+.+.+..+|.  +++..|..+-.+.+|+.+++.
T Consensus        62 ge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t-~p~g~~~~~v~ap~~s~~k~sttlt--N~~rgnevs~~p~s~~slsVh  138 (296)
T KOG0502|consen   62 GESLLTVAVRSGNSDVAVQSAQLDPDAIDET-DPEGWSALLVAAPCGSVDKVSTTLT--NGARGNEVSLMPWSPLSLSVH  138 (296)
T ss_pred             CCcccchhhhcCCcHHHHHhhccCCCCCCCC-CchhhhhhhhcCCCCCcceeeeeec--ccccCCccccccCChhhHHHH
Confidence            4455667788888888888877777666554 7889999999999999999999999  899999999999999999999


Q ss_pred             hCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCChhHHHHHHhh
Q 003814          321 SGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQH  400 (793)
Q Consensus       321 ~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~  400 (793)
                      ..+++.+..+.++-  + +..|..|.|||.+|+..|++++|++|++.|+|++...+...++|.+|++.|+.++|+.|+.+
T Consensus       139 ql~L~~~~~~~~n~--V-N~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r  215 (296)
T KOG0502|consen  139 QLHLDVVDLLVNNK--V-NACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTR  215 (296)
T ss_pred             HHHHHHHHHHhhcc--c-cCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhc
Confidence            99999888887753  3 37899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHHHHHHhcCccccccc
Q 003814          401 HPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGEL  480 (793)
Q Consensus       401 ~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~  480 (793)
                      +.++ |..|.+|-|||-+|+                                                            
T Consensus       216 ~vdV-NvyDwNGgTpLlyAv------------------------------------------------------------  234 (296)
T KOG0502|consen  216 EVDV-NVYDWNGGTPLLYAV------------------------------------------------------------  234 (296)
T ss_pred             CCCc-ceeccCCCceeeeee------------------------------------------------------------
Confidence            8886 666666666665554                                                            


Q ss_pred             cCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhhcccCCCCcHHH
Q 003814          481 LRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLH  560 (793)
Q Consensus       481 ~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n~~D~~G~TpLH  560 (793)
                                  +.||.++++.|++.|++ ++..|..|.+++..|+..|.. +|+..+++-+++.+    +|+.-+||+|
T Consensus       235 ------------rgnhvkcve~Ll~sGAd-~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~----Q~~~~~~~~~  296 (296)
T KOG0502|consen  235 ------------RGNHVKCVESLLNSGAD-VTQEDDSGYWIMDLAVALGYR-IVQQVIEKHALKLC----QDSEKRTPLH  296 (296)
T ss_pred             ------------cCChHHHHHHHHhcCCC-cccccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHh----hcccCCCCCC
Confidence                        45677899999999999 888899999999999999987 88989988887776    8988899886


No 47 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.92  E-value=1.9e-25  Score=250.80  Aligned_cols=295  Identities=19%  Similarity=0.171  Sum_probs=255.2

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccc-cccCCChHHHHH
Q 003814          240 TSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLAL-RNKVGNTALCFA  318 (793)
Q Consensus       240 ~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~-~d~~G~TpLh~A  318 (793)
                      +-.|+|-.||..||.|+++.|+.++.. +..+ |..|.+||.+|+-.||..+|+.|++  +.++++. .|+.+.|+|-+|
T Consensus       756 n~~t~LT~acaggh~e~vellv~rgan-iehr-dkkgf~plImaatagh~tvV~~llk--~ha~veaQsdrtkdt~lSla  831 (2131)
T KOG4369|consen  756 NIKTNLTSACAGGHREEVELLVVRGAN-IEHR-DKKGFVPLIMAATAGHITVVQDLLK--AHADVEAQSDRTKDTMLSLA  831 (2131)
T ss_pred             cccccccccccCccHHHHHHHHHhccc-cccc-ccccchhhhhhcccCchHHHHHHHh--hhhhhhhhcccccCceEEEe
Confidence            345899999999999999999976554 4444 9999999999999999999999999  7888876 577899999999


Q ss_pred             HHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCccc--ccCchHHHHHHHcCChhHHHH
Q 003814          319 AVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKE--EDRIELLVAVIDAGLYDVALD  396 (793)
Q Consensus       319 a~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~--~~g~t~Lh~A~~~g~~eiv~~  396 (793)
                      |..|..++|++||.+|++-. .++-...|||-+|..-|..++|+.|+.+|+++|.+.  .-|..||++|..+||.+.++.
T Consensus       832 csggr~~vvelLl~~ganke-hrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~  910 (2131)
T KOG4369|consen  832 CSGGRTRVVELLLNAGANKE-HRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLS  910 (2131)
T ss_pred             cCCCcchHHHHHHHhhcccc-ccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHH
Confidence            99999999999999999875 688889999999999999999999999999998775  468899999999999999999


Q ss_pred             HHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHHHHHHhcCccc
Q 003814          397 LIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSK  476 (793)
Q Consensus       397 LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~  476 (793)
                      |++.|.++......+-+|+|-+|+-.|+.                                  +.+..|+..     .++
T Consensus       911 ll~~gsdiNaqIeTNrnTaltla~fqgr~----------------------------------evv~lLLa~-----~an  951 (2131)
T KOG4369|consen  911 LLQPGSDINAQIETNRNTALTLALFQGRP----------------------------------EVVFLLLAA-----QAN  951 (2131)
T ss_pred             HhcccchhccccccccccceeeccccCcc----------------------------------hHHHHHHHH-----hhh
Confidence            99999998666667889999999998874                                  666666655     566


Q ss_pred             cccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccc-cCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhhcccCCC
Q 003814          477 IGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKV-DDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENN  555 (793)
Q Consensus       477 ~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~-d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n~~D~~G  555 (793)
                      +..+-++|.|||+-++..|.+|+-++||.+|+|..... -....|+|-+++..||.+.|+.|+...+.+++    ++++|
T Consensus       952 vehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v----~NkkG 1027 (2131)
T KOG4369|consen  952 VEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRV----PNKKG 1027 (2131)
T ss_pred             hhhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceec----ccCCC
Confidence            67777899999999999999999999999999933222 23455999999999999999999999888887    99999


Q ss_pred             CcHHHHHhHhCCCCc--ccccCCchhHhH
Q 003814          556 NNMLHLAGKLAPPDR--LKIDSGAALQLR  582 (793)
Q Consensus       556 ~TpLHlAa~~~~~~~--l~l~~Ga~~~~~  582 (793)
                      +|+|-+|+..|+...  ++++++++..++
T Consensus      1028 ~T~Lwla~~Gg~lss~~il~~~~ad~d~q 1056 (2131)
T KOG4369|consen 1028 CTVLWLASAGGALSSCPILVSSVADADQQ 1056 (2131)
T ss_pred             CcccchhccCCccccchHHhhcccChhhh
Confidence            999999999888653  566777765443


No 48 
>PF13962 PGG:  Domain of unknown function
Probab=99.91  E-value=4.5e-24  Score=193.70  Aligned_cols=109  Identities=42%  Similarity=0.721  Sum_probs=96.7

Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHhHhhccCCCCCCCC---CCcccccCcc-ceehhHhhhHHHHHHHHHHHHHHHHHhhcc
Q 003814          626 EKWMKDTASSCMVVATLIATVMFAAAFTVPGGNDDS---TGRPIFLHYK-SFMVFAVSDALALFCSATSILMFLSIITSR  701 (793)
Q Consensus       626 ~~~lk~~~~s~~vvA~LIATVtFaA~ft~PGG~~~~---~G~~~l~~~~-~F~~F~i~ntia~~~S~~~v~~~~~i~~~~  701 (793)
                      +||+++++++++|||+|||||||+|+|||||||+++   .|+|++.+++ .|++|+++|++||++|+++++++++.+   
T Consensus         1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~~~~---   77 (113)
T PF13962_consen    1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDDDAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLISGL---   77 (113)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHHHHh---
Confidence            479999999999999999999999999999999664   6999999888 999999999999999999998877422   


Q ss_pred             cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003814          702 YAEEDFVHSLPNRLIIGLATLFISIATMMAAFAATLFIV  740 (793)
Q Consensus       702 ~~~~~f~~~l~~~l~~~~~~l~~s~~~m~~AF~~~~~~v  740 (793)
                         .++.+..++.+.++..++++++.+|++||++|+|+|
T Consensus        78 ---~~~~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v  113 (113)
T PF13962_consen   78 ---DDFRRFLRRYLLIASVLMWIALISMMVAFAAGIYLV  113 (113)
T ss_pred             ---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence               344555667788889999999999999999999976


No 49 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.90  E-value=5.5e-24  Score=202.53  Aligned_cols=262  Identities=16%  Similarity=0.111  Sum_probs=167.6

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCc
Q 003814          244 PLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGV  323 (793)
Q Consensus       244 ~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~  323 (793)
                      .+..+...|-.+--..|......    ..+..|+.-+-.|.+.|+.+++..++.. ....+...|.+|..++|.|+-.|+
T Consensus        34 ~~~~~~~m~~t~p~~~l~~~~s~----~~~~lge~~~~~~~~s~nsd~~v~s~~~-~~~~~~~t~p~g~~~~~v~ap~~s  108 (296)
T KOG0502|consen   34 ELFEQVEMGTTEPRCALTAEISA----LRNALGESLLTVAVRSGNSDVAVQSAQL-DPDAIDETDPEGWSALLVAAPCGS  108 (296)
T ss_pred             HHHHHhhccccchhHHHHHHHHH----HHHhcCCcccchhhhcCCcHHHHHhhcc-CCCCCCCCCchhhhhhhhcCCCCC
Confidence            44444444444444444432111    1134455555555555555555555443 222233344445555555555555


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCChhHHHHHHhhCcc
Q 003814          324 TKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQ  403 (793)
Q Consensus       324 ~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~  403 (793)
                      ...+..++.+|+..+ ..+..+++|+.+++...+.+.+..+.++  .+|..|+.|.|||.+|+..|++++|++|++.|++
T Consensus       109 ~~k~sttltN~~rgn-evs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAd  185 (296)
T KOG0502|consen  109 VDKVSTTLTNGARGN-EVSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGAD  185 (296)
T ss_pred             cceeeeeecccccCC-ccccccCChhhHHHHHHHHHHHHHHhhc--cccCccccCchHhHHHHhcCchHHHHHHHHcCCC
Confidence            555555555555544 3455555555555555555555444332  2344555555555555555555555555555544


Q ss_pred             cccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHHHHHHhcCccccccccCC
Q 003814          404 LAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRK  483 (793)
Q Consensus       404 ~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~~~~  483 (793)
                                                                                               ++...+.
T Consensus       186 -------------------------------------------------------------------------p~~lgk~  192 (296)
T KOG0502|consen  186 -------------------------------------------------------------------------PDALGKY  192 (296)
T ss_pred             -------------------------------------------------------------------------hhhhhhh
Confidence                                                                                     3333345


Q ss_pred             CChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhhcccCCCCcHHHHHh
Q 003814          484 PSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAG  563 (793)
Q Consensus       484 g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n~~D~~G~TpLHlAa  563 (793)
                      ..++|.+|+..|..++|++||++++| +|.-|-+|-|||-+|++.++.++++.|++.|+|++.    .|..|++++.+|+
T Consensus       193 resALsLAt~ggytdiV~lLL~r~vd-VNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~----e~dsGy~~mdlAV  267 (296)
T KOG0502|consen  193 RESALSLATRGGYTDIVELLLTREVD-VNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQ----EDDSGYWIMDLAV  267 (296)
T ss_pred             hhhhHhHHhcCChHHHHHHHHhcCCC-cceeccCCCceeeeeecCChHHHHHHHHhcCCCccc----ccccCCcHHHHHH
Confidence            57889999999999999999999999 999999999999999999999999999999999985    8999999999999


Q ss_pred             HhCCCCcccccCCchhHhHHHhhhHHHHHHhhc-cchhHhhhcCCCCchh
Q 003814          564 KLAPPDRLKIDSGAALQLRRELHWFKEIEKVVQ-PSYREAKNSEGRTPHI  612 (793)
Q Consensus       564 ~~~~~~~l~l~~Ga~~~~~~~l~~~~~v~~ll~-~~~~~~~n~~G~Tpl~  612 (793)
                      ..|..                     .|+.++. -..++.+|+.-+||+|
T Consensus       268 alGyr---------------------~Vqqvie~h~lkl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  268 ALGYR---------------------IVQQVIEKHALKLCQDSEKRTPLH  296 (296)
T ss_pred             HhhhH---------------------HHHHHHHHHHHHHhhcccCCCCCC
Confidence            98852                     2333333 2356778888888875


No 50 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.90  E-value=1.1e-22  Score=246.89  Aligned_cols=178  Identities=18%  Similarity=0.182  Sum_probs=136.6

Q ss_pred             ccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHH
Q 003814          308 NKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVID  387 (793)
Q Consensus       308 d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~  387 (793)
                      +..+.++||.||..|+.++++.|+++|++++ ..|.+|.||||+|+..|+.+++++|+++|+++|.+|.+|.||||.|+.
T Consensus       522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n-~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~  600 (823)
T PLN03192        522 DPNMASNLLTVASTGNAALLEELLKAKLDPD-IGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAIS  600 (823)
T ss_pred             CccchhHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHH
Confidence            3345667777777777777777777777765 566677777777777777777777777777777777777777777777


Q ss_pred             cCChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHHH
Q 003814          388 AGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWE  467 (793)
Q Consensus       388 ~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~  467 (793)
                      .|+.++++.|++.++..                                                               
T Consensus       601 ~g~~~iv~~L~~~~~~~---------------------------------------------------------------  617 (823)
T PLN03192        601 AKHHKIFRILYHFASIS---------------------------------------------------------------  617 (823)
T ss_pred             hCCHHHHHHHHhcCccc---------------------------------------------------------------
Confidence            77777777666433211                                                               


Q ss_pred             HHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhh
Q 003814          468 QVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLI  547 (793)
Q Consensus       468 ~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l  547 (793)
                                  ....+.++||.|+..|+.++++.|+++|++ ++.+|.+|+||||+|+..|+.+++++|+++|++++. 
T Consensus       618 ------------~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gad-in~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~-  683 (823)
T PLN03192        618 ------------DPHAAGDLLCTAAKRNDLTAMKELLKQGLN-VDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDK-  683 (823)
T ss_pred             ------------CcccCchHHHHHHHhCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCC-
Confidence                        012345789999999999999999999999 889999999999999999999999999999999986 


Q ss_pred             hhcccCCC-CcHHHHHhHhC
Q 003814          548 ASYKDENN-NNMLHLAGKLA  566 (793)
Q Consensus       548 ~n~~D~~G-~TpLHlAa~~~  566 (793)
                         +|..| .||++++....
T Consensus       684 ---~~~~g~~t~~~l~~~~~  700 (823)
T PLN03192        684 ---ANTDDDFSPTELRELLQ  700 (823)
T ss_pred             ---CCCCCCCCHHHHHHHHH
Confidence               88888 99999986543


No 51 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.89  E-value=1.3e-22  Score=246.25  Aligned_cols=177  Identities=17%  Similarity=0.113  Sum_probs=161.1

Q ss_pred             CCCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHH
Q 003814          237 NCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALC  316 (793)
Q Consensus       237 ~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh  316 (793)
                      .+.++.++||.||..|+.++++.|++.+. +++.. |..|+||||+||..|+.++|+.|++  +|++++.+|.+|+||||
T Consensus       521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~-d~n~~-d~~G~TpLh~Aa~~g~~~~v~~Ll~--~gadin~~d~~G~TpL~  596 (823)
T PLN03192        521 DDPNMASNLLTVASTGNAALLEELLKAKL-DPDIG-DSKGRTPLHIAASKGYEDCVLVLLK--HACNVHIRDANGNTALW  596 (823)
T ss_pred             CCccchhHHHHHHHcCCHHHHHHHHHCCC-CCCCC-CCCCCCHHHHHHHcChHHHHHHHHh--cCCCCCCcCCCCCCHHH
Confidence            44456799999999999999999997654 45554 8999999999999999999999999  89999999999999999


Q ss_pred             HHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCChhHHHH
Q 003814          317 FAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALD  396 (793)
Q Consensus       317 ~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~  396 (793)
                      +|+..|+.+++++|++.++..+   ...|.+|||.|+..|+.+++++|+++|+|+|.+|.+|.||||.|+..|+.+++++
T Consensus       597 ~A~~~g~~~iv~~L~~~~~~~~---~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~  673 (823)
T PLN03192        597 NAISAKHHKIFRILYHFASISD---PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRL  673 (823)
T ss_pred             HHHHhCCHHHHHHHHhcCcccC---cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHH
Confidence            9999999999999998877543   3567899999999999999999999999999999999999999999999999999


Q ss_pred             HHhhCcccccccCCCC-CCHHHHHHh
Q 003814          397 LIQHHPQLAMARDGNG-ETALHVLAR  421 (793)
Q Consensus       397 LL~~~~~~~~~~d~~G-~TpLh~A~~  421 (793)
                      |+++|+++ +..|..| .||++.+..
T Consensus       674 Ll~~GAdv-~~~~~~g~~t~~~l~~~  698 (823)
T PLN03192        674 LIMNGADV-DKANTDDDFSPTELREL  698 (823)
T ss_pred             HHHcCCCC-CCCCCCCCCCHHHHHHH
Confidence            99999996 7788877 999988764


No 52 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.89  E-value=6e-23  Score=247.64  Aligned_cols=232  Identities=17%  Similarity=0.158  Sum_probs=177.4

Q ss_pred             CCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHH-HHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHH
Q 003814          274 RNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALC-FAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA  352 (793)
Q Consensus       274 ~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh-~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~A  352 (793)
                      ..++.+++.|++.|+.+.|+.+++...+.++|..|..|+|||| .|+.+++.+++++|+++|+     .+..|.||||.|
T Consensus        15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~Lh~A   89 (743)
T TIGR00870        15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLLHAI   89 (743)
T ss_pred             CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHHHHH
Confidence            3568999999999999999999993228899999999999999 8999999999999999986     567899999999


Q ss_pred             HHcC---CHHHHHHHHhcCCC------CC----cccccCchHHHHHHHcCChhHHHHHHhhCcccccccCCCCCCHHHHH
Q 003814          353 ALLG---HKEMIWYLYSVTKE------ED----LKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVL  419 (793)
Q Consensus       353 a~~g---~~eiv~~Ll~~gad------~n----~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A  419 (793)
                      +..+   ..++++.+.+.+.+      ++    .....|.||||.|+.+|+.++++.|+++|+++ +.++... .     
T Consensus        90 ~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv-~~~~~~~-~-----  162 (743)
T TIGR00870        90 SLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASV-PARACGD-F-----  162 (743)
T ss_pred             HhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCC-CcCcCCc-h-----
Confidence            8732   23344555544432      11    12346899999999999999999999999886 3222111 0     


Q ss_pred             HhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHH
Q 003814          420 ARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEF  499 (793)
Q Consensus       420 ~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~ei  499 (793)
                      +..+.                                                 .   ......|.||||.|+..|+.++
T Consensus       163 ~~~~~-------------------------------------------------~---~~~~~~g~tpL~~Aa~~~~~~i  190 (743)
T TIGR00870       163 FVKSQ-------------------------------------------------G---VDSFYHGESPLNAAACLGSPSI  190 (743)
T ss_pred             hhcCC-------------------------------------------------C---CCcccccccHHHHHHHhCCHHH
Confidence            00000                                                 0   0112368899999999999999


Q ss_pred             HHHHHHhCCCCcccccCCCCCHHHHHHHcC---------CHHHHHHHHHcCCCh---hhhhhcccCCCCcHHHHHhHhCC
Q 003814          500 LMVLIQMYPNLIWKVDDHSRSMFHIAVVHR---------QEKIFNLIYELGAHK---DLIASYKDENNNNMLHLAGKLAP  567 (793)
Q Consensus       500 v~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g---------~~~iv~~Ll~~gad~---~~l~n~~D~~G~TpLHlAa~~~~  567 (793)
                      +++|+++|+| ++.+|..|+||||+|+..+         ...+.+++++.+++.   .-+.+.+|.+|.||||+|++.|+
T Consensus       191 v~lLl~~gad-in~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~  269 (743)
T TIGR00870       191 VALLSEDPAD-ILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGR  269 (743)
T ss_pred             HHHHhcCCcc-hhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCC
Confidence            9999999998 8899999999999999986         234566676665543   11223489999999999999998


Q ss_pred             CCc
Q 003814          568 PDR  570 (793)
Q Consensus       568 ~~~  570 (793)
                      .+.
T Consensus       270 ~~l  272 (743)
T TIGR00870       270 IVL  272 (743)
T ss_pred             ccH
Confidence            774


No 53 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.88  E-value=1.2e-22  Score=224.23  Aligned_cols=236  Identities=20%  Similarity=0.205  Sum_probs=192.9

Q ss_pred             CCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCC
Q 003814          232 GGVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVG  311 (793)
Q Consensus       232 ~~~~~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G  311 (793)
                      ...|..|.+|.|+||.||.+|+.++++.|++..+... .. |..|.+|||+|+++|+.|+|+.|+.  .+..+|..+..|
T Consensus        40 ds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ld-l~-d~kg~~plhlaaw~g~~e~vkmll~--q~d~~na~~~e~  115 (854)
T KOG0507|consen   40 DSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLD-LC-DTKGILPLHLAAWNGNLEIVKMLLL--QTDILNAVNIEN  115 (854)
T ss_pred             ccccccCccchhHHHHHHhcCchHHHHHHhcchhhhh-hh-hccCcceEEehhhcCcchHHHHHHh--cccCCCcccccC
Confidence            4678888999999999999999999999997655433 33 6899999999999999999999999  788899999999


Q ss_pred             ChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCCh
Q 003814          312 NTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLY  391 (793)
Q Consensus       312 ~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~  391 (793)
                      .||||.|++.||.+++.+|+.+|++.. .+|+.+.|+|.+|++.|..++|+.|++..-++                    
T Consensus       116 ~tplhlaaqhgh~dvv~~Ll~~~adp~-i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~--------------------  174 (854)
T KOG0507|consen  116 ETPLHLAAQHGHLEVVFYLLKKNADPF-IRNNSKETVLDLASRFGRAEVVQMLLQKKFPV--------------------  174 (854)
T ss_pred             cCccchhhhhcchHHHHHHHhcCCCcc-ccCcccccHHHHHHHhhhhHHHHHHhhhccch--------------------
Confidence            999999999999999999999999986 89999999999999999999999999862211                    


Q ss_pred             hHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHHHHHHh
Q 003814          392 DVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLL  471 (793)
Q Consensus       392 eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~  471 (793)
                         ..+...+ +  ..++..+.+|||.|+++|+.                                  ++++.|++.   
T Consensus       175 ---~~~~~~~-~--~~~~~~~~~plHlaakngh~----------------------------------~~~~~ll~a---  211 (854)
T KOG0507|consen  175 ---QSSLRVG-D--IKRPFPAIYPLHLAAKNGHV----------------------------------ECMQALLEA---  211 (854)
T ss_pred             ---hhcccCC-C--CCCCCCCcCCcchhhhcchH----------------------------------HHHHHHHhc---
Confidence               1122222 2  35667888888888888872                                  555555544   


Q ss_pred             cCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHHHc---CCHHHHHHHHH
Q 003814          472 LDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVH---RQEKIFNLIYE  539 (793)
Q Consensus       472 ~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~---g~~~iv~~Ll~  539 (793)
                        +.++|.....| |+||.|+-.|..++|+.|++.|.+ ...+|.+|+|+|.+-...   ...+++-++..
T Consensus       212 --g~din~~t~~g-talheaalcgk~evvr~ll~~gin-~h~~n~~~qtaldil~d~~~~~~~ei~ga~~~  278 (854)
T KOG0507|consen  212 --GFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGIN-THIKNQHGQTALDIIIDLQENRRYEIAGAVKN  278 (854)
T ss_pred             --CCCcccccccc-hhhhhHhhcCcchhhhHHHhhccc-cccccccchHHHHHHHhcchhhhhhhhhhhhc
Confidence              55555555566 899999999999999999999999 889999999999887754   34455555443


No 54 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.87  E-value=4.9e-22  Score=213.01  Aligned_cols=230  Identities=22%  Similarity=0.189  Sum_probs=158.8

Q ss_pred             HHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHH
Q 003814          280 LHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKE  359 (793)
Q Consensus       280 Lh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~e  359 (793)
                      +.-|+..|..+-|+.|+.  .|++++..|.+|.|+||-+|.-.+.+||++|+++|++++ ..|..|+||||.|+..||..
T Consensus        44 ~l~A~~~~d~~ev~~ll~--~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn-~~d~e~wtPlhaaascg~~~  120 (527)
T KOG0505|consen   44 FLEACSRGDLEEVRKLLN--RGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVN-AQDNEGWTPLHAAASCGYLN  120 (527)
T ss_pred             HHhccccccHHHHHHHhc--cCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCcc-ccccccCCcchhhcccccHH
Confidence            445666667777777776  566667777777777777777777777777777777776 56777777777777777777


Q ss_pred             HHHHHHhcCCCCCcccccCchHHHHHHHcCChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhh
Q 003814          360 MIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCI  439 (793)
Q Consensus       360 iv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll  439 (793)
                      ++++|+++|+++...+.+|..|+..+...-..++...-..          ..|.+  .-+++.-.               
T Consensus       121 i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~----------r~gi~--iea~R~~~---------------  173 (527)
T KOG0505|consen  121 IVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMA----------RQGID--IEAARKAE---------------  173 (527)
T ss_pred             HHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHH----------Hhccc--HHHHhhhh---------------
Confidence            7777777777766666666666555433322222222111          11222  11221100               


Q ss_pred             hcCCCcccccCCchhHHHHHHHHHHHHHHHHhcCccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCC
Q 003814          440 YSVPGMRAILDPKLMHLQALELVKRLWEQVLLLDDSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSR  519 (793)
Q Consensus       440 ~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~  519 (793)
                                .++.     ++-+...+.     .+...+..+..|-|+||.|+.+|..++.++|+++|.+ ++.+|.+|+
T Consensus       174 ----------e~~m-----l~D~~q~l~-----~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~-~~~~D~dgW  232 (527)
T KOG0505|consen  174 ----------EQTM-----LDDARQWLN-----AGAELDARHARGATALHVAAANGYTEVAALLLQAGYS-VNIKDYDGW  232 (527)
T ss_pred             ----------HHHH-----HHHHHHHHh-----ccccccccccccchHHHHHHhhhHHHHHHHHHHhccC-cccccccCC
Confidence                      0000     011111111     2455555566699999999999999999999999999 899999999


Q ss_pred             CHHHHHHHcCCHHHHHHHHHcCCChhhhhhcccCCCCcHHHHHhH
Q 003814          520 SMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAGK  564 (793)
Q Consensus       520 T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n~~D~~G~TpLHlAa~  564 (793)
                      ||||.|+..|+.++.++|+++|++.+.    +...|.||+.+|..
T Consensus       233 tPlHAAA~Wg~~~~~elL~~~ga~~d~----~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  233 TPLHAAAHWGQEDACELLVEHGADMDA----KTKMGETPLDVADE  273 (527)
T ss_pred             CcccHHHHhhhHhHHHHHHHhhcccch----hhhcCCCCccchhh
Confidence            999999999999999999999999986    89999999999975


No 55 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.84  E-value=5.3e-21  Score=194.92  Aligned_cols=151  Identities=21%  Similarity=0.261  Sum_probs=137.2

Q ss_pred             CCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHh-----CcHHHHHHHHhCCCCCCCCCCCCCCC
Q 003814          273 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVS-----GVTKIAEVMVNKNRELPSIRGNKGAT  347 (793)
Q Consensus       273 d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~-----g~~~iv~~Ll~~g~~~~~~~~~~G~T  347 (793)
                      |.+|+|+||||+..+++++|+.||+. .-++++.+|+.|+||+++|+..     .+.++|+.|.+-| ++|......|+|
T Consensus       265 DsNGNTALHYsVSHaNF~VV~~LLDS-gvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~gQT  342 (452)
T KOG0514|consen  265 DSNGNTALHYAVSHANFDVVSILLDS-GVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQHGQT  342 (452)
T ss_pred             cCCCCeeeeeeecccchHHHHHHhcc-CcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhhcch
Confidence            89999999999999999999999994 3479999999999999999865     4788999999877 555466778999


Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCChhHHHHHHhhCcccccccCCCCCCHHHHHHhCCCC
Q 003814          348 PLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVLARKPSA  425 (793)
Q Consensus       348 pLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~  425 (793)
                      +|++|+.+|+.++|+.||..|+|+|.+|.+|.|+|++|+++||.|+++.||..........|.+|.|+|.+|...|+.
T Consensus       343 ALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~  420 (452)
T KOG0514|consen  343 ALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHR  420 (452)
T ss_pred             hhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCch
Confidence            999999999999999999999999999999999999999999999999999887666788999999999999999983


No 56 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.84  E-value=5.2e-21  Score=194.98  Aligned_cols=164  Identities=24%  Similarity=0.309  Sum_probs=149.4

Q ss_pred             CCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHh-----CcHHHHHHHHhcCCCCcccc
Q 003814          232 GGVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGA-----RRTLFVQELVNLMTPEDLAL  306 (793)
Q Consensus       232 ~~~~~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~-----g~~eiVk~LL~~~~gad~~~  306 (793)
                      .-+|..|.+|+|+||||+.+++.++|+.||+.+-.+++.. |+-|.||+++|+..     .+.++|..|.+.   .|+|+
T Consensus       259 yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~q-NrAGYtpiMLaALA~lk~~~d~~vV~~LF~m---gnVNa  334 (452)
T KOG0514|consen  259 YVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQ-NRAGYTPVMLAALAKLKQPADRTVVERLFKM---GDVNA  334 (452)
T ss_pred             HHhhhhcCCCCeeeeeeecccchHHHHHHhccCccccccc-ccccccHHHHHHHHhhcchhhHHHHHHHHhc---cCcch
Confidence            3589999999999999999999999999999988888765 99999999999865     477899999883   57777


Q ss_pred             ccc-CCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc-CCCCCcccccCchHHHH
Q 003814          307 RNK-VGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSV-TKEEDLKEEDRIELLVA  384 (793)
Q Consensus       307 ~d~-~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~-gad~n~~~~~g~t~Lh~  384 (793)
                      +-. .|+|+|++|+.+|+.++|+.||..|+|+| .+|.+|.|+|++||++||.|+|++||.. +.|+...|.+|.|+|..
T Consensus       335 KAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVN-iQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~I  413 (452)
T KOG0514|consen  335 KASQHGQTALMLAVSHGRVDMVKALLACGADVN-IQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSI  413 (452)
T ss_pred             hhhhhcchhhhhhhhcCcHHHHHHHHHccCCCc-cccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhh
Confidence            654 79999999999999999999999999998 8999999999999999999999999975 58999999999999999


Q ss_pred             HHHcCChhHHHHHHhh
Q 003814          385 VIDAGLYDVALDLIQH  400 (793)
Q Consensus       385 A~~~g~~eiv~~LL~~  400 (793)
                      |...|+-||.-.|..+
T Consensus       414 Aleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  414 ALEAGHREIAVMLYAH  429 (452)
T ss_pred             HHhcCchHHHHHHHHH
Confidence            9999999999888764


No 57 
>PHA02741 hypothetical protein; Provisional
Probab=99.83  E-value=5.2e-20  Score=180.62  Aligned_cols=130  Identities=14%  Similarity=0.142  Sum_probs=101.7

Q ss_pred             CCCCchHHHHHHHhCcHHHHHHHHhcC----CCCcccccccCCChHHHHHHHhCc----HHHHHHHHhCCCCCCCCCC-C
Q 003814          273 SRNQDTALHIAAGARRTLFVQELVNLM----TPEDLALRNKVGNTALCFAAVSGV----TKIAEVMVNKNRELPSIRG-N  343 (793)
Q Consensus       273 d~~g~TpLh~Aa~~g~~eiVk~LL~~~----~gad~~~~d~~G~TpLh~Aa~~g~----~~iv~~Ll~~g~~~~~~~~-~  343 (793)
                      |..|.||||+|++.|+.++|+.|+...    .|++++.+|..|.||||+|+..|+    .+++++|+++|++++ .++ .
T Consensus        18 ~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin-~~~~~   96 (169)
T PHA02741         18 NSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADIN-AQEML   96 (169)
T ss_pred             ccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCC-CCCcC
Confidence            667888888888888888888775421    357788888888888888888887    477888888888876 455 3


Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcccccCchHHHHHHHcCChhHHHHHHhhCcc
Q 003814          344 KGATPLCMAALLGHKEMIWYLYS-VTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQ  403 (793)
Q Consensus       344 ~G~TpLh~Aa~~g~~eiv~~Ll~-~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~  403 (793)
                      .|.||||+|+..++.+++++|++ .|++++.++.+|.||||.|+..++.++++.|++.++.
T Consensus        97 ~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~  157 (169)
T PHA02741         97 EGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVAT  157 (169)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence            78888888888888888888886 4788888888888888888888888888888876544


No 58 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.83  E-value=4.9e-20  Score=180.08  Aligned_cols=142  Identities=18%  Similarity=0.082  Sum_probs=104.5

Q ss_pred             CcccCCCCCchHHHHHHHcCCHH----HHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHH---HHHHHhcCCCCccc
Q 003814          233 GVERNCFTSYAPLHLAALKGDWD----FARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLF---VQELVNLMTPEDLA  305 (793)
Q Consensus       233 ~~~~~d~~g~T~Lh~Aa~~G~~~----~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~ei---Vk~LL~~~~gad~~  305 (793)
                      +++..+.++.++||.||+.|+.+    +++.|++ .+..++.. |..|+||||+|+..|+.+.   +++|++  .|++++
T Consensus        12 ~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~-~g~~~~~~-d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~--~Gadin   87 (166)
T PHA02743         12 GAVEIDEDEQNTFLRICRTGNIYELMEVAPFISG-DGHLLHRY-DHHGRQCTHMVAWYDRANAVMKIELLVN--MGADIN   87 (166)
T ss_pred             HHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhh-cchhhhcc-CCCCCcHHHHHHHhCccCHHHHHHHHHH--cCCCCC
Confidence            34445666777888888888874    4444443 33344433 7788888888888877554   678888  788888


Q ss_pred             ccc-cCCChHHHHHHHhCcHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCc
Q 003814          306 LRN-KVGNTALCFAAVSGVTKIAEVMVN-KNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRI  379 (793)
Q Consensus       306 ~~d-~~G~TpLh~Aa~~g~~~iv~~Ll~-~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~  379 (793)
                      .+| ..|+||||+|+..|+.+++++|++ .|++++ .++..|.||||+|+..++.+++++|+++|++++.++..|.
T Consensus        88 ~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~-~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~  162 (166)
T PHA02743         88 ARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLG-AINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGL  162 (166)
T ss_pred             CCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCcc-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCc
Confidence            887 478888888888888888888884 687776 5778888888888888888888888888888877766553


No 59 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.83  E-value=2.1e-20  Score=200.53  Aligned_cols=225  Identities=19%  Similarity=0.236  Sum_probs=176.4

Q ss_pred             HHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCChhH
Q 003814          314 ALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDV  393 (793)
Q Consensus       314 pLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~ei  393 (793)
                      .+.-|+..|..+=|+.|+..|+.++ ..|.+|.|+||-||.-.+.+||++|+++|+++|..|..|+||||.|+..|+..+
T Consensus        43 ~~l~A~~~~d~~ev~~ll~~ga~~~-~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i  121 (527)
T KOG0505|consen   43 VFLEACSRGDLEEVRKLLNRGASPN-LCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNI  121 (527)
T ss_pred             HHHhccccccHHHHHHHhccCCCcc-ccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHH
Confidence            4566888999999999999999886 799999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHHHhhhcCCCcccccCCchhHHHHHHHHHHHHHHHHhcC
Q 003814          394 ALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWRRCIYSVPGMRAILDPKLMHLQALELVKRLWEQVLLLD  473 (793)
Q Consensus       394 v~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~~ll~~~~~~~~~~~~t~lh~a~~~~~~~Ll~~~l~~~  473 (793)
                      +++|++.|+++ ...+.+|..|+..+.....       +++.                           ......    .
T Consensus       122 ~~~li~~gA~~-~avNsdg~~P~dl~e~ea~-------~~~l---------------------------~~~~~r----~  162 (527)
T KOG0505|consen  122 VEYLIQHGANL-LAVNSDGNMPYDLAEDEAT-------LDVL---------------------------ETEMAR----Q  162 (527)
T ss_pred             HHHHHHhhhhh-hhccCCCCCccccccCcch-------hHHH---------------------------HHHHHH----h
Confidence            99999999997 6788899999887664321       1111                           100000    0


Q ss_pred             ccccccccCCCChHHHHHHHcC----CHHHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhh
Q 003814          474 DSKIGELLRKPSRLLFTAVELG----NVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIAS  549 (793)
Q Consensus       474 ~~~~~~~~~~g~t~Lh~Aa~~g----~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n  549 (793)
                      +.+++            |+..-    -++=++..+..|.+ ....+..|.|.||+|+.+|..++.++|++.|.++++   
T Consensus       163 gi~ie------------a~R~~~e~~ml~D~~q~l~~G~~-~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~---  226 (527)
T KOG0505|consen  163 GIDIE------------AARKAEEQTMLDDARQWLNAGAE-LDARHARGATALHVAAANGYTEVAALLLQAGYSVNI---  226 (527)
T ss_pred             cccHH------------HHhhhhHHHHHHHHHHHHhcccc-ccccccccchHHHHHHhhhHHHHHHHHHHhccCccc---
Confidence            11111            11111    11223344457776 677777799999999999999999999999999987   


Q ss_pred             cccCCCCcHHHHHhHhCCCC--cccccCCchhHhHHHhhhHHHHHHhhccchhHhhhcCCCCchhhhhh
Q 003814          550 YKDENNNNMLHLAGKLAPPD--RLKIDSGAALQLRRELHWFKEIEKVVQPSYREAKNSEGRTPHILFSE  616 (793)
Q Consensus       550 ~~D~~G~TpLHlAa~~~~~~--~l~l~~Ga~~~~~~~l~~~~~v~~ll~~~~~~~~n~~G~Tpl~la~e  616 (793)
                       +|.+|+||||.|+.-|..+  .+++.+|+                     +.+.++..|.||++++.+
T Consensus       227 -~D~dgWtPlHAAA~Wg~~~~~elL~~~ga---------------------~~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  227 -KDYDGWTPLHAAAHWGQEDACELLVEHGA---------------------DMDAKTKMGETPLDVADE  273 (527)
T ss_pred             -ccccCCCcccHHHHhhhHhHHHHHHHhhc---------------------ccchhhhcCCCCccchhh
Confidence             9999999999999887644  24444444                     447788899999998876


No 60 
>PHA02741 hypothetical protein; Provisional
Probab=99.83  E-value=5.1e-20  Score=180.72  Aligned_cols=134  Identities=19%  Similarity=0.204  Sum_probs=118.5

Q ss_pred             CcccCCCCCchHHHHHHHcCCHHHHHHHHhcC-----CccccccCCCCCchHHHHHHHhCc----HHHHHHHHhcCCCCc
Q 003814          233 GVERNCFTSYAPLHLAALKGDWDFARNFFNLN-----PEAVCVRISRNQDTALHIAAGARR----TLFVQELVNLMTPED  303 (793)
Q Consensus       233 ~~~~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~-----~~~~~~~~d~~g~TpLh~Aa~~g~----~eiVk~LL~~~~gad  303 (793)
                      .++.++..|.||||+||+.|+.++++.|+...     +..++.+ |..|+||||+|+..|+    .+++++|++  .|++
T Consensus        13 ~~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~-d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~--~gad   89 (169)
T PHA02741         13 MIAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNAT-DDAGQMCIHIAAEKHEAQLAAEIIDHLIE--LGAD   89 (169)
T ss_pred             HhhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhcc-CCCCCcHHHHHHHcCChHHHHHHHHHHHH--cCCC
Confidence            34567888999999999999999999886421     3445544 8899999999999999    589999999  8999


Q ss_pred             cccccc-CCChHHHHHHHhCcHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 003814          304 LALRNK-VGNTALCFAAVSGVTKIAEVMVN-KNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKE  370 (793)
Q Consensus       304 ~~~~d~-~G~TpLh~Aa~~g~~~iv~~Ll~-~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad  370 (793)
                      ++.+|. .|+||||+|+..++.+++++|++ .|++++ .+|.+|.||||+|+..|+.+++++|++.++.
T Consensus        90 in~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~-~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~  157 (169)
T PHA02741         90 INAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLH-FCNADNKSPFELAIDNEDVAMMQILREIVAT  157 (169)
T ss_pred             CCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC-cCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence            999985 99999999999999999999998 588886 7899999999999999999999999998764


No 61 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.83  E-value=5.9e-20  Score=179.51  Aligned_cols=137  Identities=12%  Similarity=0.007  Sum_probs=123.9

Q ss_pred             CCCCchHHHHHHHhCcH----HHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHH---HHHHHhCCCCCCCCCC-CC
Q 003814          273 SRNQDTALHIAAGARRT----LFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKI---AEVMVNKNRELPSIRG-NK  344 (793)
Q Consensus       273 d~~g~TpLh~Aa~~g~~----eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~i---v~~Ll~~g~~~~~~~~-~~  344 (793)
                      +.++.++||.||+.|+.    +++++|++  .|++++.+|..|+||||+|+..|+.+.   +++|+++|++++ .++ ..
T Consensus        17 ~~~~~~~l~~a~~~g~~~~l~~~~~~l~~--~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin-~~d~~~   93 (166)
T PHA02743         17 DEDEQNTFLRICRTGNIYELMEVAPFISG--DGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADIN-ARELGT   93 (166)
T ss_pred             ccCCCcHHHHHHHcCCHHHHHHHHHHHhh--cchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            66788999999999998    66667777  789999999999999999999988654   899999999997 566 58


Q ss_pred             CCCHHHHHHHcCCHHHHHHHHh-cCCCCCcccccCchHHHHHHHcCChhHHHHHHhhCcccccccCCCCC
Q 003814          345 GATPLCMAALLGHKEMIWYLYS-VTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGE  413 (793)
Q Consensus       345 G~TpLh~Aa~~g~~eiv~~Ll~-~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~~~~~~d~~G~  413 (793)
                      |.||||+|+..|+.+++++|++ .|++++.++..|.||||+|+..++.+++++|++++++. +.++..|.
T Consensus        94 g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~-~~~~~~~~  162 (166)
T PHA02743         94 GNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVC-DDPLSIGL  162 (166)
T ss_pred             CCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcccCCc
Confidence            9999999999999999999995 89999999999999999999999999999999999986 77777665


No 62 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.81  E-value=6.5e-20  Score=177.19  Aligned_cols=136  Identities=18%  Similarity=0.138  Sum_probs=103.7

Q ss_pred             CcccCCCCCchHHHHHHHcCCHHHHHHHHhc----CCccccccCCCCCchHHHHHHHhCcH---HHHHHHHhcCCCCccc
Q 003814          233 GVERNCFTSYAPLHLAALKGDWDFARNFFNL----NPEAVCVRISRNQDTALHIAAGARRT---LFVQELVNLMTPEDLA  305 (793)
Q Consensus       233 ~~~~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~----~~~~~~~~~d~~g~TpLh~Aa~~g~~---eiVk~LL~~~~gad~~  305 (793)
                      ..+..|.+|+||||+||+.|+...+..+...    .+..+. ..|.+|+||||+|+..|+.   +++++|++  .|++++
T Consensus         9 ~~~~~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~-~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~--~gadin   85 (154)
T PHA02736          9 FASEPDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVL-EYNRHGKQCVHIVSNPDKADPQEKLKLLME--WGADIN   85 (154)
T ss_pred             HHHhcCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHH-HhcCCCCEEEEeecccCchhHHHHHHHHHH--cCCCcc
Confidence            3456677889999999999984322211111    011122 2377899999999998876   46788888  788999


Q ss_pred             ccc-cCCChHHHHHHHhCcHHHHHHHHhC-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Q 003814          306 LRN-KVGNTALCFAAVSGVTKIAEVMVNK-NRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEED  372 (793)
Q Consensus       306 ~~d-~~G~TpLh~Aa~~g~~~iv~~Ll~~-g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n  372 (793)
                      .+| ..|+||||+|+..|+.+++++|+++ |++++ .++..|.||||+|+..|+.+++++|+++|++.+
T Consensus        86 ~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n-~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736         86 GKERVFGNTPLHIAVYTQNYELATWLCNQPGVNME-ILNYAFKTPYYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             ccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCc-cccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            887 4899999999999999999999874 78876 688889999999999999999999999888764


No 63 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.81  E-value=6e-19  Score=185.89  Aligned_cols=139  Identities=12%  Similarity=0.087  Sum_probs=110.7

Q ss_pred             CCCCch-HHHHHHHhCcHHHHHHHHhcCCCCcccccc----cCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCC
Q 003814          273 SRNQDT-ALHIAAGARRTLFVQELVNLMTPEDLALRN----KVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGAT  347 (793)
Q Consensus       273 d~~g~T-pLh~Aa~~g~~eiVk~LL~~~~gad~~~~d----~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~T  347 (793)
                      |..|.| |||.|+..|+.++|++|++  +|++++.++    ..|.||||+|+..|+.+++++|+++|++++...+..|.|
T Consensus        29 d~~~~~~lL~~A~~~~~~eivk~LL~--~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~T  106 (300)
T PHA02884         29 NKICIANILYSSIKFHYTDIIDAILK--LGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKIT  106 (300)
T ss_pred             CcCCCCHHHHHHHHcCCHHHHHHHHH--CCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCC
Confidence            555554 5666777788899999998  788888874    578899999999999999999999998887334567889


Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCChhHHHHHHhhCcccccccCCCCCCHHHHH
Q 003814          348 PLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMARDGNGETALHVL  419 (793)
Q Consensus       348 pLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~~~~~~d~~G~TpLh~A  419 (793)
                      |||+|+..|+.+++++|+++|++++.+|..|.||||.|+..++.+++..+...      ..+..+.+|++++
T Consensus       107 pLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~------~~~~~~~~~~~~~  172 (300)
T PHA02884        107 PLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDN------EISNFYKHPKKIL  172 (300)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCC------cccccccChhhhh
Confidence            99999999999999999999999988888899999999888888877655432      2456677888765


No 64 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.79  E-value=9.6e-19  Score=161.15  Aligned_cols=108  Identities=22%  Similarity=0.163  Sum_probs=54.9

Q ss_pred             HHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcH
Q 003814          245 LHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVT  324 (793)
Q Consensus       245 Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~  324 (793)
                      +.+|+..+....|+.||+..+..++.+ |.+|.||||.|+.+||.+||+.|+.  .|++++++...|+||||-||..++.
T Consensus        67 ~lwaae~nrl~eV~~lL~e~an~vNtr-D~D~YTpLHRAaYn~h~div~~ll~--~gAn~~a~T~~GWTPLhSAckWnN~  143 (228)
T KOG0512|consen   67 LLWAAEKNRLTEVQRLLSEKANHVNTR-DEDEYTPLHRAAYNGHLDIVHELLL--SGANKEAKTNEGWTPLHSACKWNNF  143 (228)
T ss_pred             HHHHHhhccHHHHHHHHHhcccccccc-ccccccHHHHHHhcCchHHHHHHHH--ccCCcccccccCccchhhhhcccch
Confidence            444555555555555555544444443 5555555555555555555555554  4555555555555555555555555


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcC
Q 003814          325 KIAEVMVNKNRELPSIRGNKGATPLCMAALLG  356 (793)
Q Consensus       325 ~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g  356 (793)
                      +++..|+++|+|++ .......||||+||...
T Consensus       144 ~va~~LLqhgaDVn-A~t~g~ltpLhlaa~~r  174 (228)
T KOG0512|consen  144 EVAGRLLQHGADVN-AQTKGLLTPLHLAAGNR  174 (228)
T ss_pred             hHHHHHHhccCccc-ccccccchhhHHhhccc
Confidence            55555555555554 34444445555555443


No 65 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.78  E-value=4.8e-19  Score=171.12  Aligned_cols=130  Identities=11%  Similarity=0.020  Sum_probs=110.6

Q ss_pred             CCCCCchHHHHHHHhCcHHHHHHHHhcCC-----CCcccccccCCChHHHHHHHhCcH---HHHHHHHhCCCCCCCCCC-
Q 003814          272 ISRNQDTALHIAAGARRTLFVQELVNLMT-----PEDLALRNKVGNTALCFAAVSGVT---KIAEVMVNKNRELPSIRG-  342 (793)
Q Consensus       272 ~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~-----gad~~~~d~~G~TpLh~Aa~~g~~---~iv~~Ll~~g~~~~~~~~-  342 (793)
                      .|.+|.||||+||+.|+.  ++.+.....     +..++.+|.+|.||||+|+..|+.   +++++|+++|++++ .++ 
T Consensus        13 ~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin-~~~~   89 (154)
T PHA02736         13 PDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADIN-GKER   89 (154)
T ss_pred             cCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcc-ccCC
Confidence            478899999999999984  333332101     122456789999999999999987   46899999999997 566 


Q ss_pred             CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcccccCchHHHHHHHcCChhHHHHHHhhCccc
Q 003814          343 NKGATPLCMAALLGHKEMIWYLYS-VTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQL  404 (793)
Q Consensus       343 ~~G~TpLh~Aa~~g~~eiv~~Ll~-~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~~  404 (793)
                      ..|.||||+|+..|+.+++++|++ .|++++.++..|.||||+|+..|+.++++.|++.+++.
T Consensus        90 ~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~  152 (154)
T PHA02736         90 VFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQC  152 (154)
T ss_pred             CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            589999999999999999999998 59999999999999999999999999999999998763


No 66 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.78  E-value=3.9e-18  Score=179.72  Aligned_cols=155  Identities=14%  Similarity=0.097  Sum_probs=129.9

Q ss_pred             cCCCCCch-HHHHHHHcCCHHHHHHHHhcCCcccccc---CCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccc-cC
Q 003814          236 RNCFTSYA-PLHLAALKGDWDFARNFFNLNPEAVCVR---ISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRN-KV  310 (793)
Q Consensus       236 ~~d~~g~T-~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~---~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d-~~  310 (793)
                      .+|..|+| +||.|+..|+.++++.|++.+. +++.+   .+..|.||||+|+..|+.+++++|++  +|++++.++ ..
T Consensus        27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~GA-diN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~--~GADVN~~~~~~  103 (300)
T PHA02884         27 KKNKICIANILYSSIKFHYTDIIDAILKLGA-DPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIR--YGADVNRYAEEA  103 (300)
T ss_pred             ccCcCCCCHHHHHHHHcCCHHHHHHHHHCCC-CccccCcccCCCCCCHHHHHHHcCCHHHHHHHHH--cCCCcCcccCCC
Confidence            45555655 6777778899999999998765 44443   14589999999999999999999999  899999864 68


Q ss_pred             CChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCC
Q 003814          311 GNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGL  390 (793)
Q Consensus       311 G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~  390 (793)
                      |.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|++.++.+++..+...+     .+..+.+|.+++   ++
T Consensus       104 g~TpLh~Aa~~~~~eivklLL~~GAdin-~kd~~G~TpL~~A~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~n  174 (300)
T PHA02884        104 KITPLYISVLHGCLKCLEILLSYGADIN-IQTNDMVTPIELALMICNNFLAFMICDNE-----ISNFYKHPKKIL---IN  174 (300)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHhCChhHHHHhcCCc-----ccccccChhhhh---cc
Confidence            9999999999999999999999999997 78999999999999999999887765322     355567788765   47


Q ss_pred             hhHHHHHHhhCc
Q 003814          391 YDVALDLIQHHP  402 (793)
Q Consensus       391 ~eiv~~LL~~~~  402 (793)
                      .|+++.|+.+..
T Consensus       175 ~ei~~~Lish~v  186 (300)
T PHA02884        175 FDILKILVSHFI  186 (300)
T ss_pred             HHHHHHHHHHHH
Confidence            899999999875


No 67 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.77  E-value=3.8e-18  Score=157.22  Aligned_cols=161  Identities=20%  Similarity=0.154  Sum_probs=138.9

Q ss_pred             hHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCC
Q 003814          278 TALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGH  357 (793)
Q Consensus       278 TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~  357 (793)
                      --+.+|+..+.+..|+.||+. ..--+|.+|.+|+||||-|+.+|+.+||+.|+..|++.. .+...|+||||-||..++
T Consensus        65 rl~lwaae~nrl~eV~~lL~e-~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~-a~T~~GWTPLhSAckWnN  142 (228)
T KOG0512|consen   65 RLLLWAAEKNRLTEVQRLLSE-KANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKE-AKTNEGWTPLHSACKWNN  142 (228)
T ss_pred             HHHHHHHhhccHHHHHHHHHh-ccccccccccccccHHHHHHhcCchHHHHHHHHccCCcc-cccccCccchhhhhcccc
Confidence            457889999999999999995 455689999999999999999999999999999999997 788899999999999999


Q ss_pred             HHHHHHHHhcCCCCCcccccCchHHHHHHHcCCh-hHHHHHHhhCcccccccCCCCCCHHHHHHhCCCCccccchhhHHH
Q 003814          358 KEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLY-DVALDLIQHHPQLAMARDGNGETALHVLARKPSAFASGSQLGFWR  436 (793)
Q Consensus       358 ~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~-eiv~~LL~~~~~~~~~~d~~G~TpLh~A~~~g~~~~s~~~~~~~~  436 (793)
                      .+++-+|+++|+|+|+......||||.|+...+. ..+.+|+......+...+..+.||+.+|-+.+.   +...+++++
T Consensus       143 ~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~---s~~lfe~~e  219 (228)
T KOG0512|consen  143 FEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSM---SHYLFEIVE  219 (228)
T ss_pred             hhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhh---hHHHHHHHH
Confidence            9999999999999999999999999999987765 556666665544457778899999999998764   444677777


Q ss_pred             HhhhcCC
Q 003814          437 RCIYSVP  443 (793)
Q Consensus       437 ~ll~~~~  443 (793)
                      .+....|
T Consensus       220 ~~~~~~~  226 (228)
T KOG0512|consen  220 GCMNSSP  226 (228)
T ss_pred             HHhhCCC
Confidence            7765544


No 68 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.71  E-value=1e-15  Score=172.29  Aligned_cols=159  Identities=14%  Similarity=0.167  Sum_probs=114.2

Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCC--------ccccccCCCCCchHHHHHHH---hCcHHHHHHHHhcCCCCcccc----c
Q 003814          243 APLHLAALKGDWDFARNFFNLNP--------EAVCVRISRNQDTALHIAAG---ARRTLFVQELVNLMTPEDLAL----R  307 (793)
Q Consensus       243 T~Lh~Aa~~G~~~~v~~LL~~~~--------~~~~~~~d~~g~TpLh~Aa~---~g~~eiVk~LL~~~~gad~~~----~  307 (793)
                      .++..|...|..+.+..++....        ..++.+ ...|.|.||.|..   .++.++++.|++. .+.-+|.    .
T Consensus       103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~R-Ga~GET~Lh~~lL~~~~~~n~la~~LL~~-~p~lind~~~~e  180 (782)
T KOG3676|consen  103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNER-GATGETLLHKALLNLSDGHNELARVLLEI-FPKLINDIYTSE  180 (782)
T ss_pred             hhhhhccccccHHHHhccchhhhhhhhhhhhhccccc-cchhhhHHHHHHhcCchhHHHHHHHHHHH-hHHHhhhhhhhH
Confidence            57777777777777776665331        233333 5678888888876   3556788888875 3332332    2


Q ss_pred             ccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCC--------CC--------------CCCCCHHHHHHHcCCHHHHHHHH
Q 003814          308 NKVGNTALCFAAVSGVTKIAEVMVNKNRELPSI--------RG--------------NKGATPLCMAALLGHKEMIWYLY  365 (793)
Q Consensus       308 d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~--------~~--------------~~G~TpLh~Aa~~g~~eiv~~Ll  365 (793)
                      ...|+||||.|+.+.+.++|++|++.|+|++..        .|              ..|+.||-.||-.++.|++++|+
T Consensus       181 eY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl  260 (782)
T KOG3676|consen  181 EYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLL  260 (782)
T ss_pred             hhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHH
Confidence            236888888888888888888888888877521        11              13788999999999999999999


Q ss_pred             hcCCCCCcccccCchHHHHHHHcCChhHHHHHHhhCcc
Q 003814          366 SVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHHPQ  403 (793)
Q Consensus       366 ~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~  403 (793)
                      ++|||++.+|..|+|.||..+..-..++-..+++.+++
T Consensus       261 ~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~  298 (782)
T KOG3676|consen  261 AHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN  298 (782)
T ss_pred             hcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCC
Confidence            99999988888888888888877777777777776654


No 69 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.70  E-value=3.5e-17  Score=161.91  Aligned_cols=137  Identities=25%  Similarity=0.307  Sum_probs=111.2

Q ss_pred             cCCcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccC
Q 003814          231 SGGVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKV  310 (793)
Q Consensus       231 ~~~~~~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~  310 (793)
                      +++.|.-|..|.+|||+||+.|+..+++.|+.++.. ++.. +...+||||+|+..||.++|+.|++  ..+|+|+.|+.
T Consensus        24 ehdln~gddhgfsplhwaakegh~aivemll~rgar-vn~t-nmgddtplhlaaahghrdivqkll~--~kadvnavneh   99 (448)
T KOG0195|consen   24 EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGAR-VNST-NMGDDTPLHLAAAHGHRDIVQKLLS--RKADVNAVNEH   99 (448)
T ss_pred             ccccccccccCcchhhhhhhcccHHHHHHHHhcccc-cccc-cCCCCcchhhhhhcccHHHHHHHHH--Hhcccchhhcc
Confidence            357888899999999999999999999999976553 4443 7777899999999999999999999  78999999999


Q ss_pred             CChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Q 003814          311 GNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEED  372 (793)
Q Consensus       311 G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n  372 (793)
                      |+|||||||..|...+++-|+..|+.++ ..|++|.|||..|--.-...+.+.--++|.++|
T Consensus       100 gntplhyacfwgydqiaedli~~ga~v~-icnk~g~tpldkakp~l~~~l~e~aek~gq~~n  160 (448)
T KOG0195|consen  100 GNTPLHYACFWGYDQIAEDLISCGAAVN-ICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPN  160 (448)
T ss_pred             CCCchhhhhhhcHHHHHHHHHhccceee-ecccCCCCchhhhchHHHHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999886 889999999988733222222222234565555


No 70 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.69  E-value=2.2e-17  Score=163.33  Aligned_cols=109  Identities=20%  Similarity=0.248  Sum_probs=58.8

Q ss_pred             CCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHH
Q 003814          273 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA  352 (793)
Q Consensus       273 d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~A  352 (793)
                      |..|.+|||+||+.||..+|+.|+.  .|+-+|..|....||||+|+..||.++|+.|++..+|++ ..|..|.||||||
T Consensus        31 ddhgfsplhwaakegh~aivemll~--rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvn-avnehgntplhya  107 (448)
T KOG0195|consen   31 DDHGFSPLHWAAKEGHVAIVEMLLS--RGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVN-AVNEHGNTPLHYA  107 (448)
T ss_pred             cccCcchhhhhhhcccHHHHHHHHh--cccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccc-hhhccCCCchhhh
Confidence            4455555555555555555555555  455555555555555555555555555555555555554 4555555555555


Q ss_pred             HHcCCHHHHHHHHhcCCCCCcccccCchHHHH
Q 003814          353 ALLGHKEMIWYLYSVTKEEDLKEEDRIELLVA  384 (793)
Q Consensus       353 a~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~  384 (793)
                      |..|...+.+-|+..|+.+++.+++|.|||..
T Consensus       108 cfwgydqiaedli~~ga~v~icnk~g~tpldk  139 (448)
T KOG0195|consen  108 CFWGYDQIAEDLISCGAAVNICNKKGMTPLDK  139 (448)
T ss_pred             hhhcHHHHHHHHHhccceeeecccCCCCchhh
Confidence            55555555555555555555555555555543


No 71 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.67  E-value=2.8e-16  Score=136.78  Aligned_cols=88  Identities=28%  Similarity=0.422  Sum_probs=45.0

Q ss_pred             HHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHH
Q 003814          280 LHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKE  359 (793)
Q Consensus       280 Lh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~e  359 (793)
                      ||+||+.|+.+++++|++  .+.+++.    |+||||+|+..|+.+++++|+++|++++ .+|.+|+||||+|+..|+.+
T Consensus         1 L~~A~~~~~~~~~~~ll~--~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~   73 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLE--KGADINL----GNTALHYAAENGNLEIVKLLLENGADIN-SQDKNGNTALHYAAENGNLE   73 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHH--TTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT--BSTTSSBHHHHHHHTTHHH
T ss_pred             CHHHHHcCCHHHHHHHHH--CcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhccccc-ccCCCCCCHHHHHHHcCCHH
Confidence            455555555555555555  4444443    4555555555555555555555555553 44455555555555555555


Q ss_pred             HHHHHHhcCCCCCcc
Q 003814          360 MIWYLYSVTKEEDLK  374 (793)
Q Consensus       360 iv~~Ll~~gad~n~~  374 (793)
                      ++++|+++|++++.+
T Consensus        74 ~~~~Ll~~g~~~~~~   88 (89)
T PF12796_consen   74 IVKLLLEHGADVNIR   88 (89)
T ss_dssp             HHHHHHHTTT-TTSS
T ss_pred             HHHHHHHcCCCCCCc
Confidence            555555555555443


No 72 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.66  E-value=1.2e-15  Score=140.31  Aligned_cols=122  Identities=25%  Similarity=0.354  Sum_probs=73.6

Q ss_pred             CCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHH
Q 003814          273 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA  352 (793)
Q Consensus       273 d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~A  352 (793)
                      |.+|.||||+|+..|+.+++++|++  .+.+.+.++..|.||||.|+..++.+++++|++.|++++ ..+..|.||+|.|
T Consensus         4 ~~~g~t~l~~a~~~~~~~~i~~li~--~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~-~~~~~~~~~l~~a   80 (126)
T cd00204           4 DEDGRTPLHLAASNGHLEVVKLLLE--NGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVN-ARDKDGNTPLHLA   80 (126)
T ss_pred             CcCCCCHHHHHHHcCcHHHHHHHHH--cCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHH
Confidence            3455666666666666666666666  455555555666666666666666666666666665443 3455566666666


Q ss_pred             HHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCChhHHHHH
Q 003814          353 ALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDL  397 (793)
Q Consensus       353 a~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~L  397 (793)
                      +..++.+++++|++++.+.+..+..|.||++.|...++.+++++|
T Consensus        81 ~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L  125 (126)
T cd00204          81 ARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLL  125 (126)
T ss_pred             HHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence            666666666666666655555566666666666666666665555


No 73 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.66  E-value=3.8e-16  Score=175.77  Aligned_cols=166  Identities=20%  Similarity=0.255  Sum_probs=149.2

Q ss_pred             CCcccCCCCCchHHHHHHH---cCCHHHHHHHHhcCCcccccc---CCCCCchHHHHHHHhCcHHHHHHHHhcCCCCccc
Q 003814          232 GGVERNCFTSYAPLHLAAL---KGDWDFARNFFNLNPEAVCVR---ISRNQDTALHIAAGARRTLFVQELVNLMTPEDLA  305 (793)
Q Consensus       232 ~~~~~~d~~g~T~Lh~Aa~---~G~~~~v~~LL~~~~~~~~~~---~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~  305 (793)
                      .+++.++..|.|.||.|..   .++.++++.|++..|..++..   ....|+||||+|+.+.+.++|++|++  .|||++
T Consensus       134 w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~--~gADV~  211 (782)
T KOG3676|consen  134 WKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLA--AGADVH  211 (782)
T ss_pred             hccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHH--cCCchh
Confidence            4788888999999999997   456689999999887665543   23569999999999999999999999  899987


Q ss_pred             cc---------c--------------cCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Q 003814          306 LR---------N--------------KVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIW  362 (793)
Q Consensus       306 ~~---------d--------------~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~  362 (793)
                      ++         |              ..|+.||-+||..++.||+++|+++|+|++ .+|..|+|.||..+..-..+|.+
T Consensus       212 aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~-aqDS~GNTVLH~lVi~~~~~My~  290 (782)
T KOG3676|consen  212 ARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPN-AQDSNGNTVLHMLVIHFVTEMYD  290 (782)
T ss_pred             hHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCC-ccccCCChHHHHHHHHHHHHHHH
Confidence            53         1              247899999999999999999999999997 89999999999999999999999


Q ss_pred             HHHhcCCC--CCcccccCchHHHHHHHcCChhHHHHHHhh
Q 003814          363 YLYSVTKE--EDLKEEDRIELLVAVIDAGLYDVALDLIQH  400 (793)
Q Consensus       363 ~Ll~~gad--~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~  400 (793)
                      +++++|++  ...+|.+|.|||.+|+..|..++.+.+++.
T Consensus       291 ~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  291 LALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             HHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            99999999  889999999999999999999999999998


No 74 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.64  E-value=3.7e-15  Score=137.11  Aligned_cols=125  Identities=28%  Similarity=0.403  Sum_probs=113.3

Q ss_pred             cCCCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHH
Q 003814          236 RNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTAL  315 (793)
Q Consensus       236 ~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpL  315 (793)
                      ..+.+|+||||.|+..|+.+++++|++.+... +. .+..|.||||+|+..++.+++++|++  .+.+++..+..|.||+
T Consensus         2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~-~~-~~~~g~~~l~~a~~~~~~~~~~~ll~--~~~~~~~~~~~~~~~l   77 (126)
T cd00204           2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADV-NA-KDNDGRTPLHLAAKNGHLEIVKLLLE--KGADVNARDKDGNTPL   77 (126)
T ss_pred             CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCC-Cc-cCCCCCcHHHHHHHcCCHHHHHHHHH--cCCCccccCCCCCCHH
Confidence            34578999999999999999999999876543 33 37899999999999999999999999  7888999999999999


Q ss_pred             HHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 003814          316 CFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLY  365 (793)
Q Consensus       316 h~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll  365 (793)
                      |+|+..++.+++++|++++.+.. ..+..|.||+++|...++.+++++|+
T Consensus        78 ~~a~~~~~~~~~~~L~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          78 HLAARNGNLDVVKLLLKHGADVN-ARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HHHHHcCcHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            99999999999999999998876 67899999999999999999999884


No 75 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.63  E-value=2e-15  Score=131.36  Aligned_cols=86  Identities=28%  Similarity=0.449  Sum_probs=77.9

Q ss_pred             HHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcH
Q 003814          245 LHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVT  324 (793)
Q Consensus       245 Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~  324 (793)
                      ||+||+.|+.+++++|++.+.. +    +. |+||||+|+..|+.+++++|++  .|++++.+|..|+||||+|+..|+.
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~-~----~~-~~~~l~~A~~~~~~~~~~~Ll~--~g~~~~~~~~~g~t~L~~A~~~~~~   72 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGAD-I----NL-GNTALHYAAENGNLEIVKLLLE--NGADINSQDKNGNTALHYAAENGNL   72 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTST-T----TS-SSBHHHHHHHTTTHHHHHHHHH--TTTCTT-BSTTSSBHHHHHHHTTHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCC-C----CC-CCCHHHHHHHcCCHHHHHHHHH--hcccccccCCCCCCHHHHHHHcCCH
Confidence            7999999999999999985533 2    22 8999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCC
Q 003814          325 KIAEVMVNKNRELP  338 (793)
Q Consensus       325 ~iv~~Ll~~g~~~~  338 (793)
                      +++++|+++|++++
T Consensus        73 ~~~~~Ll~~g~~~~   86 (89)
T PF12796_consen   73 EIVKLLLEHGADVN   86 (89)
T ss_dssp             HHHHHHHHTTT-TT
T ss_pred             HHHHHHHHcCCCCC
Confidence            99999999999986


No 76 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.51  E-value=1.8e-13  Score=139.67  Aligned_cols=127  Identities=21%  Similarity=0.343  Sum_probs=120.4

Q ss_pred             CCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCc-----HHHHHHHHhCCC--CCCCCCCCCC
Q 003814          273 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGV-----TKIAEVMVNKNR--ELPSIRGNKG  345 (793)
Q Consensus       273 d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~-----~~iv~~Ll~~g~--~~~~~~~~~G  345 (793)
                      +..+.+++|.|+..+..+++++++.  .|++++.+|..|.||||+|+..|+     .++++.|++.|+  +....+|..|
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g  147 (235)
T COG0666          70 DLDGRLPLHSAASKGDDKIVKLLLA--SGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDG  147 (235)
T ss_pred             CccccCHHHHHHHcCcHHHHHHHHH--cCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCC
Confidence            6678999999999999999999999  899999999999999999999999     999999999999  6766789999


Q ss_pred             CCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCChhHHHHHHhhC
Q 003814          346 ATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQHH  401 (793)
Q Consensus       346 ~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~  401 (793)
                      .||||+|+..|+.+++++|++.|++++..+..|.|+++.|+..++.++++.+++.+
T Consensus       148 ~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         148 NTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999875


No 77 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.50  E-value=1e-13  Score=114.87  Aligned_cols=99  Identities=18%  Similarity=0.197  Sum_probs=51.8

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCc
Q 003814          244 PLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGV  323 (793)
Q Consensus       244 ~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~  323 (793)
                      -..|++++|..+.|+..+..+ .+++.  ...|+||||+||..|+++++++|+.  .|++++.+|+.|-|||.-|+..||
T Consensus         5 ~~~W~vkNG~~DeVk~~v~~g-~nVn~--~~ggR~plhyAAD~GQl~ilefli~--iGA~i~~kDKygITPLLsAvwEGH   79 (117)
T KOG4214|consen    5 SVAWNVKNGEIDEVKQSVNEG-LNVNE--IYGGRTPLHYAADYGQLSILEFLIS--IGANIQDKDKYGITPLLSAVWEGH   79 (117)
T ss_pred             hHhhhhccCcHHHHHHHHHcc-ccHHH--HhCCcccchHhhhcchHHHHHHHHH--hccccCCccccCCcHHHHHHHHhh
Confidence            344555555555555555433 22222  2355555555555555555555555  455555555555555555555555


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCCCH
Q 003814          324 TKIAEVMVNKNRELPSIRGNKGATP  348 (793)
Q Consensus       324 ~~iv~~Ll~~g~~~~~~~~~~G~Tp  348 (793)
                      .++|++|+++|++-. .+..+|.+.
T Consensus        80 ~~cVklLL~~GAdrt-~~~PdG~~~  103 (117)
T KOG4214|consen   80 RDCVKLLLQNGADRT-IHAPDGTAL  103 (117)
T ss_pred             HHHHHHHHHcCcccc-eeCCCchhH
Confidence            555555555555542 344444443


No 78 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.45  E-value=2.7e-13  Score=112.41  Aligned_cols=104  Identities=21%  Similarity=0.236  Sum_probs=95.3

Q ss_pred             hHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCC
Q 003814          278 TALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGH  357 (793)
Q Consensus       278 TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~  357 (793)
                      --..+++++|..+-|+..+.  .|.++|..- .|+||||+|+..|+.+++++|+..|++++ .+|+.|-|||.-|+..||
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~--~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~-~kDKygITPLLsAvwEGH   79 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVN--EGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQ-DKDKYGITPLLSAVWEGH   79 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHH--ccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccC-CccccCCcHHHHHHHHhh
Confidence            45678999999999999988  788888654 89999999999999999999999999997 799999999999999999


Q ss_pred             HHHHHHHHhcCCCCCcccccCchHHHHH
Q 003814          358 KEMIWYLYSVTKEEDLKEEDRIELLVAV  385 (793)
Q Consensus       358 ~eiv~~Ll~~gad~n~~~~~g~t~Lh~A  385 (793)
                      .++|++|+++|++-..+..+|.+.+..+
T Consensus        80 ~~cVklLL~~GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   80 RDCVKLLLQNGADRTIHAPDGTALIEAT  107 (117)
T ss_pred             HHHHHHHHHcCcccceeCCCchhHHhhc
Confidence            9999999999999999999998876654


No 79 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.43  E-value=9.6e-13  Score=134.29  Aligned_cols=131  Identities=27%  Similarity=0.306  Sum_probs=118.0

Q ss_pred             CcccCCCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCc-----HHHHHHHHhcCCCC---cc
Q 003814          233 GVERNCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARR-----TLFVQELVNLMTPE---DL  304 (793)
Q Consensus       233 ~~~~~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~-----~eiVk~LL~~~~ga---d~  304 (793)
                      .....+..+.+++|.++..++.+++++++..+... +. .+..|.||||+|+..|+     .++++.|++  .|+   +.
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~--~g~~~~~~  140 (235)
T COG0666          65 HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADV-NA-KDADGDTPLHLAALNGNPPEGNIEVAKLLLE--AGADLDVN  140 (235)
T ss_pred             ccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCc-cc-ccCCCCcHHHHHHhcCCcccchHHHHHHHHH--cCCCCCCc
Confidence            34456667889999999999999999888766554 54 49999999999999999     999999999  788   67


Q ss_pred             cccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Q 003814          305 ALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVT  368 (793)
Q Consensus       305 ~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~g  368 (793)
                      +.+|..|.||||+|+..|+.+++++|++.|+++. .++..|.|+++.|+..++.++++.+++.+
T Consensus       141 ~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~-~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         141 NLRDEDGNTPLHWAALNGDADIVELLLEAGADPN-SRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             cccCCCCCchhHHHHHcCchHHHHHHHhcCCCCc-ccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            7779999999999999999999999999999997 67999999999999999999999999976


No 80 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.32  E-value=5.8e-12  Score=149.08  Aligned_cols=105  Identities=18%  Similarity=0.180  Sum_probs=94.3

Q ss_pred             hHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCC
Q 003814          278 TALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGH  357 (793)
Q Consensus       278 TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~  357 (793)
                      +.|+.|+..|+.+.|+.|++  .|+++|.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~--~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn-~~d~~G~TpLh~A~~~g~  160 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLT--GGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPT-LLDKDGKTPLELAEENGF  160 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHH--CCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHCCc
Confidence            45889999999999999999  899999999999999999999999999999999999986 789999999999999999


Q ss_pred             HHHHHHHHhc-------CCCCCcccccCchHHHHH
Q 003814          358 KEMIWYLYSV-------TKEEDLKEEDRIELLVAV  385 (793)
Q Consensus       358 ~eiv~~Ll~~-------gad~n~~~~~g~t~Lh~A  385 (793)
                      .+++++|+++       |++++..+..|.+|+..+
T Consensus       161 ~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~  195 (664)
T PTZ00322        161 REVVQLLSRHSQCHFELGANAKPDSFTGKPPSLED  195 (664)
T ss_pred             HHHHHHHHhCCCcccccCCCCCccccCCCCccchh
Confidence            9999999998       888888888787776544


No 81 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.31  E-value=1e-11  Score=123.74  Aligned_cols=118  Identities=19%  Similarity=0.168  Sum_probs=57.2

Q ss_pred             hHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCC
Q 003814          278 TALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGH  357 (793)
Q Consensus       278 TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~  357 (793)
                      .||.-+...|..+-...||+  .-.++|.+|..|.|||..|+..|+.++|++|++.|+|+|..++..+.||||.|+..|+
T Consensus        14 ~~Lle~i~Kndt~~a~~LLs--~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn   91 (396)
T KOG1710|consen   14 SPLLEAIDKNDTEAALALLS--TVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGN   91 (396)
T ss_pred             hHHHHHHccCcHHHHHHHHH--HhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCC
Confidence            44444444444444444444  2233444455555555555555555555555555555544444444455555555555


Q ss_pred             HHHHHHHHhcCCCCCcccccCchHHHHHHHcCChhHHHHH
Q 003814          358 KEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDL  397 (793)
Q Consensus       358 ~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~L  397 (793)
                      .++.++|++.|+.....+.-|+|+-..|+.-|+.++|..+
T Consensus        92 ~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iI  131 (396)
T KOG1710|consen   92 QDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAII  131 (396)
T ss_pred             chHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHH
Confidence            5555555555554444444455554444444444444433


No 82 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.30  E-value=2.2e-12  Score=101.38  Aligned_cols=56  Identities=23%  Similarity=0.327  Sum_probs=33.4

Q ss_pred             HHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhhcccCCCCcHHHHH
Q 003814          503 LIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLA  562 (793)
Q Consensus       503 LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n~~D~~G~TpLHlA  562 (793)
                      ||++|+..++.+|..|+||||+|+.+|+.+++++|++.|+++++    +|.+|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~----~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNA----KDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT-------TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCC----CcCCCCCHHHhC
Confidence            57788545899999999999999999999999999999999986    999999999997


No 83 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.30  E-value=5.4e-12  Score=98.51  Aligned_cols=54  Identities=28%  Similarity=0.381  Sum_probs=32.5

Q ss_pred             CchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHH
Q 003814          276 QDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMV  331 (793)
Q Consensus       276 g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll  331 (793)
                      |.||||+||+.|+.+++++|++  .|.+++.+|.+|+||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~--~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLE--HGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHH--TTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHH--CCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            4566666666666666666666  56666666666666666666666666666664


No 84 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.28  E-value=1.3e-11  Score=146.13  Aligned_cols=106  Identities=22%  Similarity=0.257  Sum_probs=96.7

Q ss_pred             hHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCChh
Q 003814          313 TALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYD  392 (793)
Q Consensus       313 TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~e  392 (793)
                      ++|+.|+..|+.++++.|+++|++++ .+|..|.||||+|+..|+.+++++|+++|++++.+|.+|.||||+|+..|+.+
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin-~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~  162 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPN-CRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFRE  162 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHH
Confidence            46899999999999999999999997 78999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhh-------CcccccccCCCCCCHHHHHH
Q 003814          393 VALDLIQH-------HPQLAMARDGNGETALHVLA  420 (793)
Q Consensus       393 iv~~LL~~-------~~~~~~~~d~~G~TpLh~A~  420 (793)
                      ++++|+++       +++. +..+..|.+|+..+.
T Consensus       163 iv~~Ll~~~~~~~~~ga~~-~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        163 VVQLLSRHSQCHFELGANA-KPDSFTGKPPSLEDS  196 (664)
T ss_pred             HHHHHHhCCCcccccCCCC-CccccCCCCccchhh
Confidence            99999998       6654 566777887776554


No 85 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.27  E-value=1.1e-11  Score=132.31  Aligned_cols=117  Identities=21%  Similarity=0.145  Sum_probs=64.0

Q ss_pred             HHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcH
Q 003814          245 LHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVT  324 (793)
Q Consensus       245 Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~  324 (793)
                      |.-|+..|.+|+|+..+.+- .+... .|..|-|+||-|+..||.+||++||+  .|+++|+.|.+|+||||+|+.+++.
T Consensus       554 LLDaaLeGEldlVq~~i~ev-~DpSq-pNdEGITaLHNAiCaghyeIVkFLi~--~ganVNa~DSdGWTPLHCAASCNnv  629 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEV-TDPSQ-PNDEGITALHNAICAGHYEIVKFLIE--FGANVNAADSDGWTPLHCAASCNNV  629 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhh-cCCCC-CCccchhHHhhhhhcchhHHHHHHHh--cCCcccCccCCCCchhhhhhhcCch
Confidence            34455566666666555321 11111 25556666666666666666666666  5666666666666666666666666


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHH
Q 003814          325 KIAEVMVNKNRELPSIRGNKGATPLCMAA--LLGHKEMIWYLY  365 (793)
Q Consensus       325 ~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa--~~g~~eiv~~Ll  365 (793)
                      .+++.|++.|+.+-...-.++.||..-+-  +.|...+.+||.
T Consensus       630 ~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~  672 (752)
T KOG0515|consen  630 PMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLY  672 (752)
T ss_pred             HHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHH
Confidence            66666666665554333445555554432  234455555554


No 86 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.23  E-value=1.8e-11  Score=95.54  Aligned_cols=54  Identities=30%  Similarity=0.513  Sum_probs=35.8

Q ss_pred             CChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 003814          311 GNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLY  365 (793)
Q Consensus       311 G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll  365 (793)
                      |.||||+|++.|+.+++++|+++|.+++ .+|.+|.||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din-~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADIN-AQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT--B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            5677777777777777777777777776 45777777777777777777777764


No 87 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.22  E-value=1.1e-11  Score=97.43  Aligned_cols=50  Identities=28%  Similarity=0.494  Sum_probs=15.4

Q ss_pred             CcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHH
Q 003814          302 EDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMA  352 (793)
Q Consensus       302 ad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~A  352 (793)
                      .+++.+|..|+||||+||..|+.++|++|++.|++++ .+|.+|+||||+|
T Consensus         7 ~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~-~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    7 ADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPN-AKDKDGQTPLHYA   56 (56)
T ss_dssp             --TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT----TTS--HHHH-
T ss_pred             CCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCC-CCcCCCCCHHHhC
Confidence            4444444444444444444444444444444444443 3444444444443


No 88 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.22  E-value=5.6e-11  Score=118.50  Aligned_cols=119  Identities=24%  Similarity=0.257  Sum_probs=107.1

Q ss_pred             chHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccc-cccCCChHHHHHHH
Q 003814          242 YAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLAL-RNKVGNTALCFAAV  320 (793)
Q Consensus       242 ~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~-~d~~G~TpLh~Aa~  320 (793)
                      ..||.-++..|+.+....||.. ...++.+ |+.|.|||..|+..|+.++|+.||+  .|+|+|. ++..++||||+|+.
T Consensus        13 ~~~Lle~i~Kndt~~a~~LLs~-vr~vn~~-D~sGMs~LahAaykGnl~~v~lll~--~gaDvN~~qhg~~YTpLmFAAL   88 (396)
T KOG1710|consen   13 KSPLLEAIDKNDTEAALALLST-VRQVNQR-DPSGMSVLAHAAYKGNLTLVELLLE--LGADVNDKQHGTLYTPLMFAAL   88 (396)
T ss_pred             hhHHHHHHccCcHHHHHHHHHH-hhhhhcc-CCCcccHHHHHHhcCcHHHHHHHHH--hCCCcCcccccccccHHHHHHH
Confidence            3699999999999999999965 4445555 9999999999999999999999999  7999986 55689999999999


Q ss_pred             hCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 003814          321 SGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLY  365 (793)
Q Consensus       321 ~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll  365 (793)
                      +|+.++.++|++.|+... ..|.-|+|+-.+|+.-||.++|..+-
T Consensus        89 SGn~dvcrllldaGa~~~-~vNsvgrTAaqmAAFVG~H~CV~iIN  132 (396)
T KOG1710|consen   89 SGNQDVCRLLLDAGARMY-LVNSVGRTAAQMAAFVGHHECVAIIN  132 (396)
T ss_pred             cCCchHHHHHHhccCccc-cccchhhhHHHHHHHhcchHHHHHHh
Confidence            999999999999999986 68889999999999999999998763


No 89 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.21  E-value=3.2e-11  Score=128.83  Aligned_cols=118  Identities=21%  Similarity=0.100  Sum_probs=98.3

Q ss_pred             HHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCH
Q 003814          279 ALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHK  358 (793)
Q Consensus       279 pLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~  358 (793)
                      .|.-|+..|.+|+|+..+.  .-.|+...|..|-||||-|+..||.+||++|++.|+++| ..|.+||||||+|+..++.
T Consensus       553 LLLDaaLeGEldlVq~~i~--ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVN-a~DSdGWTPLHCAASCNnv  629 (752)
T KOG0515|consen  553 LLLDAALEGELDLVQRIIY--EVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVN-AADSDGWTPLHCAASCNNV  629 (752)
T ss_pred             HHHhhhhcchHHHHHHHHH--hhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCccc-CccCCCCchhhhhhhcCch
Confidence            3556888999999999998  567888899999999999999999999999999999997 7999999999999999999


Q ss_pred             HHHHHHHhcCCCCCcc-cccCchHHHHHH--HcCChhHHHHHHh
Q 003814          359 EMIWYLYSVTKEEDLK-EEDRIELLVAVI--DAGLYDVALDLIQ  399 (793)
Q Consensus       359 eiv~~Ll~~gad~n~~-~~~g~t~Lh~A~--~~g~~eiv~~LL~  399 (793)
                      .+++.|++.|+-+-+. -.++.|+..-+-  +.|+.++.++|-.
T Consensus       630 ~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  630 PMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             HHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            9999999999876543 345667665442  4566777777754


No 90 
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.69  E-value=5e-08  Score=105.23  Aligned_cols=120  Identities=23%  Similarity=0.232  Sum_probs=100.3

Q ss_pred             HHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcH
Q 003814          245 LHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVT  324 (793)
Q Consensus       245 Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~  324 (793)
                      +..|+..++.--++.....++..+ .+ +.+..|.||+|+..|+-|+|+++|++....-+++.|+.|+|+||-|+..++.
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll-~~-~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r  947 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLL-IQ-GPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNR  947 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceE-ee-CcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcch
Confidence            566777777666666665555443 33 7889999999999999999999999644456888899999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Q 003814          325 KIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSV  367 (793)
Q Consensus       325 ~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~  367 (793)
                      .+.++|++.|+.+- ..|..|.||-..|-+.|+.+...||-.+
T Consensus       948 ~vc~~lvdagasl~-ktd~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  948 AVCQLLVDAGASLR-KTDSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             HHHHHHHhcchhhe-ecccCCCChHHHHHhcCCchHHHHHhhh
Confidence            99999999999985 7899999999999999999999998653


No 91 
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.56  E-value=2.2e-07  Score=99.23  Aligned_cols=84  Identities=24%  Similarity=0.221  Sum_probs=49.2

Q ss_pred             HHHHHHhCcHHHHHHHHhcCCCCccccccc-CCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCH
Q 003814          280 LHIAAGARRTLFVQELVNLMTPEDLALRNK-VGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHK  358 (793)
Q Consensus       280 Lh~Aa~~g~~eiVk~LL~~~~gad~~~~d~-~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~  358 (793)
                      ||-.++.|+.+..-.||.  -|+++|..+. .|.||||.|++.|+..-+++|+-.|+|+. ..|.+|.||+.+|-..||-
T Consensus       137 LhasvRt~nlet~LRll~--lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~-a~d~~GmtP~~~AR~~gH~  213 (669)
T KOG0818|consen  137 LHSSVRTGNLETCLRLLS--LGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPG-AQDSSGMTPVDYARQGGHH  213 (669)
T ss_pred             HHHHhhcccHHHHHHHHH--cccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCC-CCCCCCCcHHHHHHhcCch
Confidence            555666666665555555  4555555443 45666666666666666666666666654 4566666666666666666


Q ss_pred             HHHHHHHh
Q 003814          359 EMIWYLYS  366 (793)
Q Consensus       359 eiv~~Ll~  366 (793)
                      ++.+-|++
T Consensus       214 ~laeRl~e  221 (669)
T KOG0818|consen  214 ELAERLVE  221 (669)
T ss_pred             HHHHHHHH
Confidence            65555554


No 92 
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.55  E-value=6.8e-08  Score=102.76  Aligned_cols=94  Identities=22%  Similarity=0.220  Sum_probs=80.4

Q ss_pred             CCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHH
Q 003814          274 RNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAA  353 (793)
Q Consensus       274 ~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa  353 (793)
                      .++..++++|++.|.+..++.+.-  .|.|++.+|.+.+|+||.||..|+.+++++|++........+|..|+|||.-|.
T Consensus       504 ~~~~i~~~~aa~~GD~~alrRf~l--~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~  581 (622)
T KOG0506|consen  504 NDTVINVMYAAKNGDLSALRRFAL--QGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAK  581 (622)
T ss_pred             ccchhhhhhhhhcCCHHHHHHHHH--hcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhH
Confidence            445678899999999998888776  689999999999999999999999999999998866555678999999999999


Q ss_pred             HcCCHHHHHHHHhcCC
Q 003814          354 LLGHKEMIWYLYSVTK  369 (793)
Q Consensus       354 ~~g~~eiv~~Ll~~ga  369 (793)
                      ..+|.+++++|-+...
T Consensus       582 ~F~h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  582 HFKHKEVVKLLEEAQY  597 (622)
T ss_pred             hcCcHHHHHHHHHHhc
Confidence            9999999999877543


No 93 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.54  E-value=5.9e-08  Score=109.21  Aligned_cols=95  Identities=26%  Similarity=0.353  Sum_probs=60.8

Q ss_pred             HHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCccccccc-CCChHHHHHHHhCcHHHHHHHHhCCC
Q 003814          257 ARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNK-VGNTALCFAAVSGVTKIAEVMVNKNR  335 (793)
Q Consensus       257 v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~-~G~TpLh~Aa~~g~~~iv~~Ll~~g~  335 (793)
                      ++-++++.........|..|+|+||+|+..|..+++++||+  +|+|++.+|+ .|.||||-|+..|+++++-+|+.+|.
T Consensus        33 lk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlq--hGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~  110 (1267)
T KOG0783|consen   33 LKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQ--HGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGR  110 (1267)
T ss_pred             HHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHh--cCceeeeccccccchHhhHhhhhchHHHHHHHHhcCC
Confidence            34444443333322336667777777777777777777777  5777777665 46777777777777777777777776


Q ss_pred             CCCCCCCCCCCCHHHHHHH
Q 003814          336 ELPSIRGNKGATPLCMAAL  354 (793)
Q Consensus       336 ~~~~~~~~~G~TpLh~Aa~  354 (793)
                      .+- .+|++|.+||..-++
T Consensus       111 SL~-i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen  111 SLR-IKDKEGLSPLQFLSR  128 (1267)
T ss_pred             ceE-EecccCCCHHHHHhh
Confidence            653 667777777766655


No 94 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.52  E-value=6.3e-08  Score=108.97  Aligned_cols=86  Identities=16%  Similarity=0.189  Sum_probs=79.7

Q ss_pred             cccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHH
Q 003814          303 DLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELL  382 (793)
Q Consensus       303 d~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~L  382 (793)
                      -.|.+|..|+|+||+|+..|..+++++|+++|.++.-.....|+||||.|+..|+++++-.|+.+|+...++|++|..||
T Consensus        44 ~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglspl  123 (1267)
T KOG0783|consen   44 LANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPL  123 (1267)
T ss_pred             hhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHH
Confidence            37889999999999999999999999999999999854556799999999999999999999999999999999999999


Q ss_pred             HHHHHc
Q 003814          383 VAVIDA  388 (793)
Q Consensus       383 h~A~~~  388 (793)
                      ...++-
T Consensus       124 q~~~r~  129 (1267)
T KOG0783|consen  124 QFLSRV  129 (1267)
T ss_pred             HHHhhc
Confidence            988763


No 95 
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.52  E-value=7.9e-08  Score=102.25  Aligned_cols=95  Identities=21%  Similarity=0.184  Sum_probs=84.1

Q ss_pred             CCCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHH
Q 003814          237 NCFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALC  316 (793)
Q Consensus       237 ~d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh  316 (793)
                      ++.++..++++|++.|++..++.+.-.+ .++..+ |.+.+|+||+||..|+.+++|+|++. .+.+++.+|..|+|||.
T Consensus       502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g-~D~~~~-DyD~RTaLHvAAaEG~v~v~kfl~~~-~kv~~~~kDRw~rtPlD  578 (622)
T KOG0506|consen  502 RENDTVINVMYAAKNGDLSALRRFALQG-MDLETK-DYDDRTALHVAAAEGHVEVVKFLLNA-CKVDPDPKDRWGRTPLD  578 (622)
T ss_pred             ccccchhhhhhhhhcCCHHHHHHHHHhc-cccccc-ccccchhheeecccCceeHHHHHHHH-HcCCCChhhccCCCcch
Confidence            4455667999999999999999988654 455554 99999999999999999999999997 78999999999999999


Q ss_pred             HHHHhCcHHHHHHHHhCC
Q 003814          317 FAAVSGVTKIAEVMVNKN  334 (793)
Q Consensus       317 ~Aa~~g~~~iv~~Ll~~g  334 (793)
                      -|...+|.+++++|-+.-
T Consensus       579 dA~~F~h~~v~k~L~~~~  596 (622)
T KOG0506|consen  579 DAKHFKHKEVVKLLEEAQ  596 (622)
T ss_pred             HhHhcCcHHHHHHHHHHh
Confidence            999999999999998753


No 96 
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.50  E-value=8.4e-07  Score=101.82  Aligned_cols=122  Identities=20%  Similarity=0.190  Sum_probs=86.2

Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCCc---cccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHH
Q 003814          243 APLHLAALKGDWDFARNFFNLNPE---AVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAA  319 (793)
Q Consensus       243 T~Lh~Aa~~G~~~~v~~LL~~~~~---~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa  319 (793)
                      --...|+.+|+.-.|+..++....   +++. +|.-|+++||+|..+.+.|++++|++  ++..+       ..+|.+|+
T Consensus        27 ~~fL~a~E~gd~~~V~k~l~~~~~~~lninc-~d~lGr~al~iai~nenle~~eLLl~--~~~~~-------gdALL~aI   96 (822)
T KOG3609|consen   27 KGFLLAHENGDVPLVAKALEYKAVSKLNINC-RDPLGRLALHIAIDNENLELQELLLD--TSSEE-------GDALLLAI   96 (822)
T ss_pred             HHHHHHHHcCChHHHHHHHHhccccccchhc-cChHhhhceecccccccHHHHHHHhc--Ccccc-------chHHHHHH
Confidence            366788888888888888876543   2333 47788888888888888888888888  44333       34788888


Q ss_pred             HhCcHHHHHHHHhCCCCC---------CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcc
Q 003814          320 VSGVTKIAEVMVNKNREL---------PSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLK  374 (793)
Q Consensus       320 ~~g~~~iv~~Ll~~g~~~---------~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~  374 (793)
                      +.|..++|+.++.+-...         +...-..+.|||.+||..++.|++++|+++|+.+...
T Consensus        97 ~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~P  160 (822)
T KOG3609|consen   97 AVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIP  160 (822)
T ss_pred             HHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCC
Confidence            888888888888764322         1112234567788888878888888887777766443


No 97 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.48  E-value=1.8e-07  Score=62.97  Aligned_cols=28  Identities=36%  Similarity=0.531  Sum_probs=16.8

Q ss_pred             CCCHHHHHHHcCCHHHHHHHHhcCCCCC
Q 003814          345 GATPLCMAALLGHKEMIWYLYSVTKEED  372 (793)
Q Consensus       345 G~TpLh~Aa~~g~~eiv~~Ll~~gad~n  372 (793)
                      |+||||+||+.|+.|+|++|+++|+|+|
T Consensus         2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    2 GNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            5566666666666666666666665554


No 98 
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.47  E-value=3.4e-07  Score=99.00  Aligned_cols=119  Identities=18%  Similarity=0.120  Sum_probs=97.8

Q ss_pred             HHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCC-CCCCCCCCCCCHHHHHHHcCCH
Q 003814          280 LHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRE-LPSIRGNKGATPLCMAALLGHK  358 (793)
Q Consensus       280 Lh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~-~~~~~~~~G~TpLh~Aa~~g~~  358 (793)
                      +..|+..+++--++.+-.  .|.++-.++.+..|-||+|++.|+-+||++++++|+. +....|..|+|+||-|+..++-
T Consensus       870 il~av~~~D~~klqE~h~--~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r  947 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHL--NGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNR  947 (1004)
T ss_pred             HHHHHHhccHHHHHHHHh--cCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcch
Confidence            445555555444444444  6788888899999999999999999999999999873 4446678899999999999999


Q ss_pred             HHHHHHHhcCCCCCcccccCchHHHHHHHcCChhHHHHHHhh
Q 003814          359 EMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLYDVALDLIQH  400 (793)
Q Consensus       359 eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~  400 (793)
                      .+.++|++.|+.....|..|.||-..|-+.|..|++-+|-.+
T Consensus       948 ~vc~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  948 AVCQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             HHHHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence            999999999999988999999999999999999998888654


No 99 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.43  E-value=2.2e-07  Score=62.46  Aligned_cols=29  Identities=21%  Similarity=0.369  Sum_probs=23.8

Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCChh
Q 003814          517 HSRSMFHIAVVHRQEKIFNLIYELGAHKD  545 (793)
Q Consensus       517 ~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~  545 (793)
                      +|+||||+|+++|+.+++++|+++|+|+|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            47888888888888888888888888775


No 100
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.40  E-value=7.4e-07  Score=95.37  Aligned_cols=97  Identities=23%  Similarity=0.252  Sum_probs=83.1

Q ss_pred             cccCCCCCch------HHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCccccc
Q 003814          234 VERNCFTSYA------PLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALR  307 (793)
Q Consensus       234 ~~~~d~~g~T------~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~  307 (793)
                      ..-+|.+|.|      -||..++.|+.+..-.||..+++.... --..|.||||.|++.|+..-+++|+-  .|+|+...
T Consensus       120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~-hpekg~TpLHvAAk~Gq~~Q~ElL~v--YGAD~~a~  196 (669)
T KOG0818|consen  120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFF-HPEKGNTPLHVAAKAGQILQAELLAV--YGADPGAQ  196 (669)
T ss_pred             CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCC-CcccCCchhHHHHhccchhhhhHHhh--ccCCCCCC
Confidence            3445555554      599999999999999999877654433 35789999999999999999999988  89999999


Q ss_pred             ccCCChHHHHHHHhCcHHHHHHHHhC
Q 003814          308 NKVGNTALCFAAVSGVTKIAEVMVNK  333 (793)
Q Consensus       308 d~~G~TpLh~Aa~~g~~~iv~~Ll~~  333 (793)
                      |.+|.||+.+|-..||.++.+.|++.
T Consensus       197 d~~GmtP~~~AR~~gH~~laeRl~e~  222 (669)
T KOG0818|consen  197 DSSGMTPVDYARQGGHHELAERLVEI  222 (669)
T ss_pred             CCCCCcHHHHHHhcCchHHHHHHHHH
Confidence            99999999999999999999988873


No 101
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.38  E-value=6.3e-07  Score=97.43  Aligned_cols=89  Identities=22%  Similarity=0.227  Sum_probs=71.7

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCc
Q 003814          244 PLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGV  323 (793)
Q Consensus       244 ~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~  323 (793)
                      |||+++...+.+-+...+.........+.|..|.||||+|+..|+.+.++.|+.  .|+++..+|++|++|||.|+..|+
T Consensus        23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~--a~Adv~~kN~~gWs~L~EAv~~g~  100 (560)
T KOG0522|consen   23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLS--AGADVSIKNNEGWSPLHEAVSTGN  100 (560)
T ss_pred             ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHh--cCCCccccccccccHHHHHHHcCC
Confidence            588888888887776655444444445568888999999999999999999988  788888999999999999999999


Q ss_pred             HHHHHHHHhCC
Q 003814          324 TKIAEVMVNKN  334 (793)
Q Consensus       324 ~~iv~~Ll~~g  334 (793)
                      .+++..++.+-
T Consensus       101 ~q~i~~vlr~~  111 (560)
T KOG0522|consen  101 EQIITEVLRHL  111 (560)
T ss_pred             HHHHHHHHHHh
Confidence            88888887653


No 102
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.36  E-value=5e-07  Score=62.46  Aligned_cols=31  Identities=29%  Similarity=0.471  Sum_probs=20.0

Q ss_pred             CCCHHHHHHHcCCHHHHHHHHhcCCCCCccc
Q 003814          345 GATPLCMAALLGHKEMIWYLYSVTKEEDLKE  375 (793)
Q Consensus       345 G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~  375 (793)
                      |.||||+|+..|+.+++++|+++|++++.+|
T Consensus         2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    2 GNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             SBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            5666666666666666666666666666554


No 103
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.30  E-value=8.4e-07  Score=61.31  Aligned_cols=31  Identities=29%  Similarity=0.355  Sum_probs=18.8

Q ss_pred             CchHHHHHHHhCcHHHHHHHHhcCCCCcccccc
Q 003814          276 QDTALHIAAGARRTLFVQELVNLMTPEDLALRN  308 (793)
Q Consensus       276 g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d  308 (793)
                      |.||||+|+..|+.+++++|++  +|++++.+|
T Consensus         2 G~TpLh~A~~~~~~~~v~~Ll~--~ga~~~~~d   32 (33)
T PF00023_consen    2 GNTPLHYAAQRGHPDIVKLLLK--HGADINARD   32 (33)
T ss_dssp             SBBHHHHHHHTTCHHHHHHHHH--TTSCTTCBC
T ss_pred             cccHHHHHHHHHHHHHHHHHHH--CcCCCCCCC
Confidence            5566666666666666666666  566665554


No 104
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.29  E-value=1.5e-06  Score=94.51  Aligned_cols=89  Identities=20%  Similarity=0.259  Sum_probs=75.5

Q ss_pred             hHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCC
Q 003814          278 TALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGH  357 (793)
Q Consensus       278 TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~  357 (793)
                      -|||+++.....+-...++..-....++.+|..|+||||+|+.-|+.+.++.|+.+|+++. .+|+.|++|||.|+..|+
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~-~kN~~gWs~L~EAv~~g~  100 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVS-IKNNEGWSPLHEAVSTGN  100 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCcc-ccccccccHHHHHHHcCC
Confidence            4599999887776555544321456788999999999999999999999999999999986 899999999999999999


Q ss_pred             HHHHHHHHhc
Q 003814          358 KEMIWYLYSV  367 (793)
Q Consensus       358 ~eiv~~Ll~~  367 (793)
                      .+++..++.+
T Consensus       101 ~q~i~~vlr~  110 (560)
T KOG0522|consen  101 EQIITEVLRH  110 (560)
T ss_pred             HHHHHHHHHH
Confidence            9988887764


No 105
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.24  E-value=3.4e-06  Score=96.94  Aligned_cols=127  Identities=13%  Similarity=0.173  Sum_probs=104.5

Q ss_pred             CCCchHHHHHHHhCcHHHHHHHHhcCCC--CcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHH
Q 003814          274 RNQDTALHIAAGARRTLFVQELVNLMTP--EDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCM  351 (793)
Q Consensus       274 ~~g~TpLh~Aa~~g~~eiVk~LL~~~~g--ad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~  351 (793)
                      ..+.--...|+..|+.-.|+..++....  -++|.+|.-|+++|+.|+.+.+.+++++|++++.+.        ..+|.+
T Consensus        23 ~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~   94 (822)
T KOG3609|consen   23 NEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLL   94 (822)
T ss_pred             chhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHH
Confidence            3445567789999999999999986444  568899999999999999999999999999987654        348999


Q ss_pred             HHHcCCHHHHHHHHhcCCCC----------CcccccCchHHHHHHHcCChhHHHHHHhhCccccccc
Q 003814          352 AALLGHKEMIWYLYSVTKEE----------DLKEEDRIELLVAVIDAGLYDVALDLIQHHPQLAMAR  408 (793)
Q Consensus       352 Aa~~g~~eiv~~Ll~~gad~----------n~~~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~~~~~~  408 (793)
                      |+..|..+.|+.++.+....          ...-..+.||+.+|+..+++|+++.|+++|+.++..-
T Consensus        95 aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~PH  161 (822)
T KOG3609|consen   95 AIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIPH  161 (822)
T ss_pred             HHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCCc
Confidence            99999999999999875432          1223457899999999999999999999998874433


No 106
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.13  E-value=6.8e-06  Score=89.79  Aligned_cols=89  Identities=17%  Similarity=0.068  Sum_probs=53.4

Q ss_pred             HHHHHHHhCcHHHHHHHHhCCCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCC
Q 003814          314 ALCFAAVSGVTKIAEVMVNKNREL---PSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGL  390 (793)
Q Consensus       314 pLh~Aa~~g~~~iv~~Ll~~g~~~---~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~  390 (793)
                      -|.-|+...++..+-+||.+|...   ....+.+|.|+||+||+.|++.+.++|+=+|+|+-.+|..|+|+|.||-+.|.
T Consensus       627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~s  706 (749)
T KOG0705|consen  627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGS  706 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhccc
Confidence            344555555666666666665421   11234455666666666666666666666666666666666666666666666


Q ss_pred             hhHHHHHHhhCc
Q 003814          391 YDVALDLIQHHP  402 (793)
Q Consensus       391 ~eiv~~LL~~~~  402 (793)
                      -|++..|+++|.
T Consensus       707 qec~d~llq~gc  718 (749)
T KOG0705|consen  707 QECIDVLLQYGC  718 (749)
T ss_pred             HHHHHHHHHcCC
Confidence            666666666653


No 107
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.07  E-value=9e-06  Score=88.85  Aligned_cols=94  Identities=23%  Similarity=0.200  Sum_probs=79.3

Q ss_pred             hHHHHHHHhCcHHHHHHHHhcCCCCcccc--cccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHc
Q 003814          278 TALHIAAGARRTLFVQELVNLMTPEDLAL--RNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALL  355 (793)
Q Consensus       278 TpLh~Aa~~g~~eiVk~LL~~~~gad~~~--~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~  355 (793)
                      .-|.-|+...++..+-.||.+.....+|.  .+.+|+||||+||+.|++.+.++|+-+|+|+. .+|..|.|+|.||-+.
T Consensus       626 qqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~-~rda~g~t~l~yar~a  704 (749)
T KOG0705|consen  626 QQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVM-ARDAHGRTALFYARQA  704 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccce-ecccCCchhhhhHhhc
Confidence            35777888888888888988433344443  45678999999999999999999999999986 8999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCC
Q 003814          356 GHKEMIWYLYSVTKEED  372 (793)
Q Consensus       356 g~~eiv~~Ll~~gad~n  372 (793)
                      |.-+++..|+++|...+
T Consensus       705 ~sqec~d~llq~gcp~e  721 (749)
T KOG0705|consen  705 GSQECIDVLLQYGCPDE  721 (749)
T ss_pred             ccHHHHHHHHHcCCCcc
Confidence            99999999999997643


No 108
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.00  E-value=6.2e-06  Score=96.83  Aligned_cols=125  Identities=15%  Similarity=0.143  Sum_probs=78.5

Q ss_pred             CCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhC-CCCCCCCCCCCCCCHHHH
Q 003814          273 SRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNK-NRELPSIRGNKGATPLCM  351 (793)
Q Consensus       273 d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~-g~~~~~~~~~~G~TpLh~  351 (793)
                      ...|+|.||.++..+..-.++.+++. .+......|.+|.-.+|+ |..++.+.+-+|+.. |..+ ..+|..|+||||+
T Consensus       571 ~~r~~lllhL~a~~lyawLie~~~e~-~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai-~i~D~~G~tpL~w  647 (975)
T KOG0520|consen  571 NFRDMLLLHLLAELLYAWLIEKVIEW-AGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAI-DIRDRNGWTPLHW  647 (975)
T ss_pred             CCcchHHHHHHHHHhHHHHHHHHhcc-cccCchhhcccCCChhhH-hhhcCCceeEEEEeeccccc-ccccCCCCcccch
Confidence            55677777777777777777777763 244445556666666666 444555555555543 3333 3677777777777


Q ss_pred             HHHcCCHHHHHHHHhcCCCCCc------ccccCchHHHHHHHcCChhHHHHHHhh
Q 003814          352 AALLGHKEMIWYLYSVTKEEDL------KEEDRIELLVAVIDAGLYDVALDLIQH  400 (793)
Q Consensus       352 Aa~~g~~eiv~~Ll~~gad~n~------~~~~g~t~Lh~A~~~g~~eiv~~LL~~  400 (793)
                      |+..|+..++..|++.|++...      ....|.|+-..|-.+|+..+.-+|-+.
T Consensus       648 Aa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  648 AAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             HhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            7777777777777766655432      234467777777777777666666543


No 109
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.82  E-value=1.6e-05  Score=94.35  Aligned_cols=88  Identities=23%  Similarity=0.280  Sum_probs=67.7

Q ss_pred             cCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHc
Q 003814          309 KVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDA  388 (793)
Q Consensus       309 ~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~  388 (793)
                      ..|.|+||.|+..|..-++++|+++|++++ ..|..|.||||.+...|+...+..|+++|+++++.+.+|.+||+.|...
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn-~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~  732 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGADVN-ALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEA  732 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCcch-hhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhh
Confidence            356788888888888888888888888865 6788888888888888888888888888888888888888888887666


Q ss_pred             CChhHHHHH
Q 003814          389 GLYDVALDL  397 (793)
Q Consensus       389 g~~eiv~~L  397 (793)
                      .+.+++-++
T Consensus       733 ~~~d~~~l~  741 (785)
T KOG0521|consen  733 ANADIVLLL  741 (785)
T ss_pred             ccccHHHHH
Confidence            555555444


No 110
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.81  E-value=2.6e-05  Score=91.75  Aligned_cols=126  Identities=19%  Similarity=0.201  Sum_probs=54.7

Q ss_pred             CCCCchHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHH
Q 003814          238 CFTSYAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCF  317 (793)
Q Consensus       238 d~~g~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~  317 (793)
                      ...|+|.||.++..+..-.++.+++-.+.... ..|.+|.-.+|. |..++.+.+-+|+.. .|..++.+|..|+||||+
T Consensus       571 ~~r~~lllhL~a~~lyawLie~~~e~~~~~~~-eld~d~qgV~hf-ca~lg~ewA~ll~~~-~~~ai~i~D~~G~tpL~w  647 (975)
T KOG0520|consen  571 NFRDMLLLHLLAELLYAWLIEKVIEWAGSGDL-ELDRDGQGVIHF-CAALGYEWAFLPISA-DGVAIDIRDRNGWTPLHW  647 (975)
T ss_pred             CCcchHHHHHHHHHhHHHHHHHHhcccccCch-hhcccCCChhhH-hhhcCCceeEEEEee-cccccccccCCCCcccch
Confidence            34444555555555555555555442111111 113344444444 333444444333332 444455555555555555


Q ss_pred             HHHhCcHHHHHHHHhCCCCCCCCC-----CCCCCCHHHHHHHcCCHHHHHHHHh
Q 003814          318 AAVSGVTKIAEVMVNKNRELPSIR-----GNKGATPLCMAALLGHKEMIWYLYS  366 (793)
Q Consensus       318 Aa~~g~~~iv~~Ll~~g~~~~~~~-----~~~G~TpLh~Aa~~g~~eiv~~Ll~  366 (793)
                      |+..|+..++..|++.|++.....     ...|.|+-.+|..+|+..+.-+|-+
T Consensus       648 Aa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse  701 (975)
T KOG0520|consen  648 AAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSE  701 (975)
T ss_pred             HhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhh
Confidence            555555555555554443322111     1234445555555555554444433


No 111
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.80  E-value=2.1e-05  Score=93.31  Aligned_cols=89  Identities=24%  Similarity=0.287  Sum_probs=81.3

Q ss_pred             CCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHH
Q 003814          274 RNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAA  353 (793)
Q Consensus       274 ~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa  353 (793)
                      ..|.|+||.|+..|..-++++|++  .|+++|..|..|+||||.+...|+...+..|+++|++.+ ..+.+|.+||++|.
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~--~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~-a~~~~~~~~l~~a~  730 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQ--NGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPN-AFDPDGKLPLDIAM  730 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHh--cCCcchhhhccCCCcchhhhhhcccchhhhhcccccccc-ccCccCcchhhHHh
Confidence            347899999999999999999999  899999999999999999999999999999999999987 78999999999998


Q ss_pred             HcCCHHHHHHHH
Q 003814          354 LLGHKEMIWYLY  365 (793)
Q Consensus       354 ~~g~~eiv~~Ll  365 (793)
                      ...+.+++-++.
T Consensus       731 ~~~~~d~~~l~~  742 (785)
T KOG0521|consen  731 EAANADIVLLLR  742 (785)
T ss_pred             hhccccHHHHHh
Confidence            877766665543


No 112
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.74  E-value=4.6e-05  Score=79.57  Aligned_cols=75  Identities=17%  Similarity=0.139  Sum_probs=59.7

Q ss_pred             chHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHc
Q 003814          277 DTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALL  355 (793)
Q Consensus       277 ~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~  355 (793)
                      .--|..||+.|..+.|++|++  .|.++|++|....+||.+|+..||.++|++|+++|+--. ....+|.-.+ +++.+
T Consensus        37 f~elceacR~GD~d~v~~LVe--tgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~-rdtf~G~RC~-YgaLn  111 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVE--TGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICS-RDTFDGDRCH-YGALN  111 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHH--hCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCccc-ccccCcchhh-hhhhh
Confidence            345889999999999999999  899999999999999999999999999999999998643 2334455444 44433


No 113
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.66  E-value=9.3e-05  Score=77.36  Aligned_cols=67  Identities=19%  Similarity=0.113  Sum_probs=39.9

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChH
Q 003814          244 PLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTA  314 (793)
Q Consensus       244 ~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~Tp  314 (793)
                      -|..||+.|+.+.|++|++ .+.++|.. |....+||.+|+..||.++|++|++  +|+--..-.-+|.-+
T Consensus        39 elceacR~GD~d~v~~LVe-tgvnVN~v-D~fD~spL~lAsLcGHe~vvklLLe--nGAiC~rdtf~G~RC  105 (516)
T KOG0511|consen   39 ELCEACRAGDVDRVRYLVE-TGVNVNAV-DRFDSSPLYLASLCGHEDVVKLLLE--NGAICSRDTFDGDRC  105 (516)
T ss_pred             HHHHHhhcccHHHHHHHHH-hCCCcchh-hcccccHHHHHHHcCcHHHHHHHHH--cCCcccccccCcchh
Confidence            5666666777777766666 34445544 6666667777777777777776666  555433322344444


No 114
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.59  E-value=0.00014  Score=69.40  Aligned_cols=70  Identities=17%  Similarity=0.284  Sum_probs=50.7

Q ss_pred             CCcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 003814          301 PEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKE  370 (793)
Q Consensus       301 gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad  370 (793)
                      +.++|.+|..|+|||+.|+..|+.+.|.+|+.+|+-.....|..|.+++.+|-+.|+.++|+.|.+.-.+
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e   71 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE   71 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence            3567777777778887777777777777777777333346777777777777777777777777776433


No 115
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.52  E-value=0.00022  Score=68.16  Aligned_cols=68  Identities=19%  Similarity=0.127  Sum_probs=59.6

Q ss_pred             cccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCC-CcccccccCCChHHHHHHHhCcHHHHHHHHhCCCCC
Q 003814          267 AVCVRISRNQDTALHIAAGARRTLFVQELVNLMTP-EDLALRNKVGNTALCFAAVSGVTKIAEVMVNKNREL  337 (793)
Q Consensus       267 ~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~g-ad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~  337 (793)
                      +++.+ |..|+|||++|+..|+.+.|.+|+.  +| +.+...|..|.+++.+|-+.|+.++|+.|.+...+.
T Consensus         4 ~in~r-D~fgWTalmcaa~eg~~eavsyllg--rg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et   72 (223)
T KOG2384|consen    4 NINAR-DAFGWTALMCAAMEGSNEAVSYLLG--RGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET   72 (223)
T ss_pred             Cccch-hhhcchHHHHHhhhcchhHHHHHhc--cCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence            45555 8899999999999999999999999  78 889999999999999999999999999999875544


No 116
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.01  E-value=0.011  Score=37.75  Aligned_cols=26  Identities=35%  Similarity=0.451  Sum_probs=12.7

Q ss_pred             CCCHHHHHHHcCCHHHHHHHHhcCCC
Q 003814          345 GATPLCMAALLGHKEMIWYLYSVTKE  370 (793)
Q Consensus       345 G~TpLh~Aa~~g~~eiv~~Ll~~gad  370 (793)
                      |.||+|+|+..++.++++.|++.|.+
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~   27 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGAD   27 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            34455555555555555555544443


No 117
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.79  E-value=0.014  Score=37.30  Aligned_cols=27  Identities=26%  Similarity=0.544  Sum_probs=16.5

Q ss_pred             CChHHHHHHHhCcHHHHHHHHhCCCCC
Q 003814          311 GNTALCFAAVSGVTKIAEVMVNKNREL  337 (793)
Q Consensus       311 G~TpLh~Aa~~g~~~iv~~Ll~~g~~~  337 (793)
                      |.||+|+|+..++.++++.|++++.++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~   28 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADI   28 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            556666666666666666666665543


No 118
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.80  E-value=0.033  Score=60.94  Aligned_cols=64  Identities=16%  Similarity=0.119  Sum_probs=52.3

Q ss_pred             CHHHHHHHHHhCCCCc-----ccccCCCCCHHHHHHHcCCHHHHHHHHHcCCChhhhhhcccCCCCcHHHHHh
Q 003814          496 NVEFLMVLIQMYPNLI-----WKVDDHSRSMFHIAVVHRQEKIFNLIYELGAHKDLIASYKDENNNNMLHLAG  563 (793)
Q Consensus       496 ~~eiv~~LL~~g~d~~-----~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~gad~~~l~n~~D~~G~TpLHlAa  563 (793)
                      -...+++|.+++.+..     ...+..--|+||+|+..|..++|.+||+.|+|+..    +|..|+||..++.
T Consensus       403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~----kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPST----KDGAGRTPYSLSA  471 (591)
T ss_pred             chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchh----cccCCCCcccccc
Confidence            3667888888776631     22344567999999999999999999999999986    9999999999987


No 119
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.06  E-value=0.066  Score=58.70  Aligned_cols=67  Identities=15%  Similarity=0.092  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHHhcC-ccccccccCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHHH
Q 003814          460 ELVKRLWEQVLLLD-DSKIGELLRKPSRLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVV  527 (793)
Q Consensus       460 ~~~~~Ll~~~l~~~-~~~~~~~~~~g~t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~  527 (793)
                      ..+++|.++.+..+ .......+.-..|+||+|+..|..++|.+||+.|.| ....|..|+||..++..
T Consensus       405 ~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~D-p~~kd~~Grtpy~ls~n  472 (591)
T KOG2505|consen  405 DSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCD-PSTKDGAGRTPYSLSAN  472 (591)
T ss_pred             hHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCC-chhcccCCCCccccccc
Confidence            34555555544432 112222344467999999999999999999999988 88999999999999883


No 120
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=93.30  E-value=1.1  Score=43.50  Aligned_cols=45  Identities=20%  Similarity=0.204  Sum_probs=40.1

Q ss_pred             HHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHH
Q 003814          488 LFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYE  539 (793)
Q Consensus       488 Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~  539 (793)
                      |..|+.+|-...+...+++|.+ ++      .++|-.|+.+++.+|+.+++.
T Consensus       147 l~~a~~kgll~F~letlkygg~-~~------~~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  147 LEKAAAKGLLPFVLETLKYGGN-VD------IIVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHCCCHHHHHHHHHcCCc-cc------HHHHHHHHHhhHHHHHHHhhc
Confidence            7899999999999999999988 32      289999999999999998874


No 121
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=92.64  E-value=0.97  Score=43.81  Aligned_cols=133  Identities=11%  Similarity=0.020  Sum_probs=88.4

Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhC
Q 003814          243 APLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSG  322 (793)
Q Consensus       243 T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g  322 (793)
                      -.|..|+..+-..++++.-+.-...     -...++..-.||+..+.|+|++.-+     ++..  .+-.+-+-.|....
T Consensus        48 CLl~HAVk~nmL~ILqkyke~L~~~-----~~~~q~LFElAC~~qkydiV~WI~q-----nL~i--~~~~~iFdIA~~~k  115 (192)
T PF03158_consen   48 CLLYHAVKYNMLSILQKYKEDLENE-----RYLNQELFELACEEQKYDIVKWIGQ-----NLHI--YNPEDIFDIAFAKK  115 (192)
T ss_pred             HHHHHHHHcCcHHHHHHHHHHhhcc-----hhHHHHHHHHHHHHccccHHHHHhh-----ccCC--CCchhhhhhhhhcc
Confidence            3677788888888888765432111     1356788889999999999999855     1211  22345667787777


Q ss_pred             cHHHHH----HHHhCCCCCCCCCCCCCC-------CHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchHHHHHHHcCCh
Q 003814          323 VTKIAE----VMVNKNRELPSIRGNKGA-------TPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIELLVAVIDAGLY  391 (793)
Q Consensus       323 ~~~iv~----~Ll~~g~~~~~~~~~~G~-------TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~Lh~A~~~g~~  391 (793)
                      +.++..    ++.++...-      .+.       .-|..|+..|-...+...+++|.+++.      ++|..|+..++-
T Consensus       116 DlsLyslGY~l~~~~~~~~------~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhR  183 (192)
T PF03158_consen  116 DLSLYSLGYKLLFNRMMSE------HNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHR  183 (192)
T ss_pred             chhHHHHHHHHHHhhcccc------cccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHH
Confidence            776521    233321110      111       236778889999888888888887653      788889888888


Q ss_pred             hHHHHHHh
Q 003814          392 DVALDLIQ  399 (793)
Q Consensus       392 eiv~~LL~  399 (793)
                      .++.+++.
T Consensus       184 kIL~yfi~  191 (192)
T PF03158_consen  184 KILDYFIR  191 (192)
T ss_pred             HHHHHhhc
Confidence            88887764


No 122
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=91.95  E-value=0.77  Score=45.74  Aligned_cols=114  Identities=12%  Similarity=0.075  Sum_probs=65.8

Q ss_pred             HHHHHHHhCcHHHHHHHHhcCCCCcccccccCCChHHHHHHHhCcHHHHHHHHhCC----CCCCCCCCCCCCCHHHHHHH
Q 003814          279 ALHIAAGARRTLFVQELVNLMTPEDLALRNKVGNTALCFAAVSGVTKIAEVMVNKN----RELPSIRGNKGATPLCMAAL  354 (793)
Q Consensus       279 pLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g----~~~~~~~~~~G~TpLh~Aa~  354 (793)
                      .|--|+..-+.+-+..++.       +.+  +-.+++-+|..++..+++-+|+.+-    .++...  ..+.--+.++..
T Consensus       156 sledAV~AsN~~~i~~~Vt-------dKk--dA~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~--~~~~ydieY~LS  224 (284)
T PF06128_consen  156 SLEDAVKASNYEEISNLVT-------DKK--DAHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASM--EKELYDIEYLLS  224 (284)
T ss_pred             cHHHHHhhcCHHHHHHHhc-------chH--HHHHHHHHHhcccHHHHHHHHHhhcceecchhhhc--CcchhhHHHHHh
Confidence            3555666666666555554       111  2346677777777777777777642    122111  112223334332


Q ss_pred             --cCCHHHHHHHHhcC-CCCCcc---cccCchHHHHHHHcCChhHHHHHHhhCcc
Q 003814          355 --LGHKEMIWYLYSVT-KEEDLK---EEDRIELLVAVIDAGLYDVALDLIQHHPQ  403 (793)
Q Consensus       355 --~g~~eiv~~Ll~~g-ad~n~~---~~~g~t~Lh~A~~~g~~eiv~~LL~~~~~  403 (793)
                        ..+..++++.+++| +++|.+   -+.|.|-|.-|+..++.+++..||+.|+.
T Consensus       225 ~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  225 EHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             hcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence              23466777777777 556543   45677778888888888888888877764


No 123
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=90.50  E-value=1.5  Score=43.74  Aligned_cols=115  Identities=16%  Similarity=0.160  Sum_probs=79.5

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCccccccc----CCChHHHHHH
Q 003814          244 PLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDLALRNK----VGNTALCFAA  319 (793)
Q Consensus       244 ~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~~~~d~----~G~TpLh~Aa  319 (793)
                      .|--|+..-+.+.+..++...         ..-.++|-+|..++..+++-+|+..   -....+|-    .+.--+-++.
T Consensus       156 sledAV~AsN~~~i~~~VtdK---------kdA~~Am~~si~~~K~dva~~lls~---f~ft~~dv~~~~~~~ydieY~L  223 (284)
T PF06128_consen  156 SLEDAVKASNYEEISNLVTDK---------KDAHQAMWLSIGNAKEDVALYLLSK---FNFTKQDVASMEKELYDIEYLL  223 (284)
T ss_pred             cHHHHHhhcCHHHHHHHhcch---------HHHHHHHHHHhcccHHHHHHHHHhh---cceecchhhhcCcchhhHHHHH
Confidence            566777777777776666421         1235788888888888888888872   22222221    1233344444


Q ss_pred             Hh--CcHHHHHHHHhCCC-CCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Q 003814          320 VS--GVTKIAEVMVNKNR-ELP--SIRGNKGATPLCMAALLGHKEMIWYLYSVTKE  370 (793)
Q Consensus       320 ~~--g~~~iv~~Ll~~g~-~~~--~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad  370 (793)
                      ..  .+..+.++.+++|- +++  ..+-+.|.|-|.-|...++.+++.+|+++||-
T Consensus       224 S~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  224 SEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             hhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence            33  35778899999884 333  23567899999999999999999999999984


No 124
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=79.80  E-value=3.1  Score=34.56  Aligned_cols=47  Identities=19%  Similarity=0.246  Sum_probs=40.1

Q ss_pred             hHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHc
Q 003814          486 RLLFTAVELGNVEFLMVLIQMYPNLIWKVDDHSRSMFHIAVVHRQEKIFNLIYEL  540 (793)
Q Consensus       486 t~Lh~Aa~~g~~eiv~~LL~~g~d~~~~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~  540 (793)
                      .-+..|+..|+.|+++.+++.+..     +   ...+..|+...+-+++++|++.
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~~~-----~---~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKNKP-----D---NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHhcc-----H---HHHHHHHHHHhhHHHHHHHHHh
Confidence            348899999999999999976532     1   5679999999999999999986


No 125
>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569. This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.
Probab=77.66  E-value=66  Score=30.81  Aligned_cols=30  Identities=27%  Similarity=0.407  Sum_probs=26.1

Q ss_pred             cccccCccceehhHhhhHHHHHHHHHHHHH
Q 003814          664 RPIFLHYKSFMVFAVSDALALFCSATSILM  693 (793)
Q Consensus       664 ~~~l~~~~~F~~F~i~ntia~~~S~~~v~~  693 (793)
                      ++...+.++|+.|+++|.++...|+..++.
T Consensus        35 ~a~f~d~~af~y~v~anai~~~Ysll~l~~   64 (154)
T TIGR01569        35 KAKFSDLPAFVYFVVANAIACGYSLLSLVV   64 (154)
T ss_pred             eeeeeccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456778899999999999999999988765


No 126
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=77.52  E-value=7.2  Score=32.36  Aligned_cols=45  Identities=16%  Similarity=0.268  Sum_probs=20.8

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHhCcHHHHHHHHh
Q 003814          244 PLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDTALHIAAGARRTLFVQELVN  297 (793)
Q Consensus       244 ~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~  297 (793)
                      -|..|+..|+.|+++.+++....      +   ...+..|+...+-+++++|++
T Consensus         9 tl~~Ai~GGN~eII~~c~~~~~~------~---~~~l~~AI~~H~n~i~~~l~~   53 (76)
T PF11929_consen    9 TLEYAIIGGNFEIINICLKKNKP------D---NDCLEYAIKSHNNEIADWLIE   53 (76)
T ss_pred             HHHHHHhCCCHHHHHHHHHHhcc------H---HHHHHHHHHHhhHHHHHHHHH
Confidence            44555555555555544432110      0   234555555555555555554


No 127
>PF06570 DUF1129:  Protein of unknown function (DUF1129);  InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=74.54  E-value=41  Score=33.84  Aligned_cols=21  Identities=19%  Similarity=0.147  Sum_probs=13.4

Q ss_pred             hhHhhhcCCCCchhhhhhhhhh
Q 003814          599 YREAKNSEGRTPHILFSEEHRR  620 (793)
Q Consensus       599 ~~~~~n~~G~Tpl~la~e~~~~  620 (793)
                      -.++++--| ||-.+|.+--+.
T Consensus        45 G~tA~~lfG-~P~~~a~eli~~   65 (206)
T PF06570_consen   45 GKTARQLFG-DPKEYADELIKP   65 (206)
T ss_pred             CCcHHHHcC-CHHHHHHHHhcc
Confidence            356677777 777776665443


No 128
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=69.80  E-value=80  Score=33.91  Aligned_cols=126  Identities=10%  Similarity=-0.025  Sum_probs=69.4

Q ss_pred             CCCCchHHHHHHHcCCHHHHHHHHhc-CCccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCCCcc-cccccCCChHH
Q 003814          238 CFTSYAPLHLAALKGDWDFARNFFNL-NPEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTPEDL-ALRNKVGNTAL  315 (793)
Q Consensus       238 d~~g~T~Lh~Aa~~G~~~~v~~LL~~-~~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~gad~-~~~d~~G~TpL  315 (793)
                      |.+|.-.|..+...++.+....+++. .+.......|..|+-.+......+..+-...+++...|.-+ -..|..|.-.+
T Consensus        18 ~~~gsr~lQ~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~g~~vvq~~l~~~~~~~~~~i~~~~~~~~~~l~~~~~g~~vl   97 (322)
T cd07920          18 DQHGSRFLQQKLEEATPEEKELIFDEILPHVVELMVDPFGNYVIQKLFEHGTEEQRLQLLEKILGHVVRLSLDMYGCRVI   97 (322)
T ss_pred             CchhhHHHHHHhccCCHHHHHHHHHHHHHhHHHHhcCccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHcccchhHHHH
Confidence            44566677777777777777666654 12222223477788777777777777665555553222211 13556666666


Q ss_pred             HHHHHhCcHHHHHHHHh----CCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 003814          316 CFAAVSGVTKIAEVMVN----KNRELPSIRGNKGATPLCMAALLGHKEMIWYLY  365 (793)
Q Consensus       316 h~Aa~~g~~~iv~~Ll~----~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll  365 (793)
                      -.+...+..+-...+++    +-..+  ..|..|...+..+...+..+..+.++
T Consensus        98 qkll~~~~~~~~~~i~~~l~~~~~~L--~~d~~gn~Vvq~~l~~~~~~~~~~i~  149 (322)
T cd07920          98 QKLLESISEEQISLLVKELRGHVVEL--VKDQNGNHVIQKCIEKFPPEDLQFII  149 (322)
T ss_pred             HHHHHhcCHHHHHHHHHHHHHCHHHH--hhcccccHHHHHHHHhCCHHHHHHHH
Confidence            66666655433333332    21122  35566666666666655555444443


No 129
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=59.02  E-value=5.7  Score=38.84  Aligned_cols=51  Identities=22%  Similarity=0.197  Sum_probs=42.5

Q ss_pred             cCCCCCHHHHHHHcCCHHHHH-HHHHcCCChhhhhhcccCCCCcHHHHHhHh
Q 003814          515 DDHSRSMFHIAVVHRQEKIFN-LIYELGAHKDLIASYKDENNNNMLHLAGKL  565 (793)
Q Consensus       515 d~~G~T~Lh~A~~~g~~~iv~-~Ll~~gad~~~l~n~~D~~G~TpLHlAa~~  565 (793)
                      |.+-.+|||-|+.-++.+++- ++++..+.+.-++|..|.+|..+|.+|...
T Consensus       219 d~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~  270 (280)
T KOG4591|consen  219 DGKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCR  270 (280)
T ss_pred             cCCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHH
Confidence            566678999999999998875 778888877767788999999999999643


No 130
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=50.80  E-value=2e+02  Score=30.80  Aligned_cols=118  Identities=7%  Similarity=-0.068  Sum_probs=65.2

Q ss_pred             CCCchHHHHHHHcCCHHHHHHHHhcC-CccccccCCCCCchHHHHHHHhCcHHHHHHHHhcCCC-CcccccccCCChHHH
Q 003814          239 FTSYAPLHLAALKGDWDFARNFFNLN-PEAVCVRISRNQDTALHIAAGARRTLFVQELVNLMTP-EDLALRNKVGNTALC  316 (793)
Q Consensus       239 ~~g~T~Lh~Aa~~G~~~~v~~LL~~~-~~~~~~~~d~~g~TpLh~Aa~~g~~eiVk~LL~~~~g-ad~~~~d~~G~TpLh  316 (793)
                      ..|.-.+-.....+..+....+++.- +.......+..|.-.+-.+...+..+....+++...+ ..--..|..|+..+.
T Consensus        55 ~~g~~vvq~~l~~~~~~~~~~i~~~~~~~~~~l~~~~~g~~vlqkll~~~~~~~~~~i~~~l~~~~~~L~~d~~gn~Vvq  134 (322)
T cd07920          55 PFGNYVIQKLFEHGTEEQRLQLLEKILGHVVRLSLDMYGCRVIQKLLESISEEQISLLVKELRGHVVELVKDQNGNHVIQ  134 (322)
T ss_pred             ccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHhcCHHHHHHHHHHHHHCHHHHhhcccccHHHH
Confidence            34555666666666665444444321 2222223477888888877777776555555553222 122246778888888


Q ss_pred             HHHHhCcHHHHHHHHh----CCCCCCCCCCCCCCCHHHHHHHcCCH
Q 003814          317 FAAVSGVTKIAEVMVN----KNRELPSIRGNKGATPLCMAALLGHK  358 (793)
Q Consensus       317 ~Aa~~g~~~iv~~Ll~----~g~~~~~~~~~~G~TpLh~Aa~~g~~  358 (793)
                      .+...+..+..+.+++    +-.++  ..+..|...+.........
T Consensus       135 ~~l~~~~~~~~~~i~~~l~~~~~~l--~~~~~G~~vvq~~l~~~~~  178 (322)
T cd07920         135 KCIEKFPPEDLQFIIDAFKGNCVAL--STHPYGCRVIQRCLEHCSE  178 (322)
T ss_pred             HHHHhCCHHHHHHHHHHHHHHHHHH--HcCccccHHHHHHHHhCCH
Confidence            8877776665555443    22222  2345565555555554443


No 131
>COG2322 Predicted membrane protein [Function unknown]
Probab=50.62  E-value=1.5e+02  Score=28.43  Aligned_cols=26  Identities=23%  Similarity=0.186  Sum_probs=14.3

Q ss_pred             eehhHhhhHHHHHHHHHHHHHHHHHh
Q 003814          673 FMVFAVSDALALFCSATSILMFLSII  698 (793)
Q Consensus       673 F~~F~i~ntia~~~S~~~v~~~~~i~  698 (793)
                      |.+=++-+.-|.+.|++.++++.+..
T Consensus        40 ~~v~i~p~lnai~~~~s~~~llag~~   65 (177)
T COG2322          40 FNVEILPMLNAIFNSLSFIFLLAGWR   65 (177)
T ss_pred             cCchhhhhHHHHHHHHHHHHHHHHHH
Confidence            44445555556666666665555543


No 132
>KOG3359 consensus Dolichyl-phosphate-mannose:protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=49.76  E-value=1.1e+02  Score=36.57  Aligned_cols=23  Identities=26%  Similarity=0.522  Sum_probs=18.4

Q ss_pred             hhHhhhHHHHHHHHHHHHHHHHH
Q 003814          675 VFAVSDALALFCSATSILMFLSI  697 (793)
Q Consensus       675 ~F~i~ntia~~~S~~~v~~~~~i  697 (793)
                      -|++.|++.+|+.++++..++..
T Consensus       169 r~ILLDs~Llff~~~~~y~~~r~  191 (723)
T KOG3359|consen  169 RFILLDSMLLFFMAAAVYCFVRF  191 (723)
T ss_pred             hHHHHhHHHHHHHHHHHHHHHHH
Confidence            58999999999888888666543


No 133
>PTZ00370 STEVOR; Provisional
Probab=42.96  E-value=32  Score=36.01  Aligned_cols=26  Identities=12%  Similarity=-0.001  Sum_probs=17.1

Q ss_pred             hhhhhhHHHHHHHhhHHHHHHHHHHh
Q 003814          753 ATGACVPVSLFALLQFPLLSDMISHL  778 (793)
Q Consensus       753 ~~~~~~~~~~~~~~~~~~~~~~~~~~  778 (793)
                      |-++.+++.++.+.-..||+|+-+++
T Consensus       257 ygiaalvllil~vvliilYiwlyrrR  282 (296)
T PTZ00370        257 YGIAALVLLILAVVLIILYIWLYRRR  282 (296)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            44555556666667777888876665


No 134
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=42.79  E-value=38  Score=36.37  Aligned_cols=36  Identities=8%  Similarity=0.014  Sum_probs=20.9

Q ss_pred             hhh-hhhhHHHHHHHhhHHHH-HHHHHHhhc--ccccccc
Q 003814          752 IAT-GACVPVSLFALLQFPLL-SDMISHLYK--YSIFTRR  787 (793)
Q Consensus       752 ~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~  787 (793)
                      .++ ++|+.+.+|++.-+.++ ..++|-.||  .+||+=|
T Consensus       221 ~sig~~gfl~~IlvLaIvRlILF~I~~il~~g~~g~W~FP  260 (372)
T KOG2927|consen  221 LSIGAGGFLAFILVLAIVRLILFGITWILTGGKHGFWLFP  260 (372)
T ss_pred             eecchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEecc
Confidence            344 45566655555444333 346677788  8888654


No 135
>PRK11056 hypothetical protein; Provisional
Probab=42.70  E-value=47  Score=29.90  Aligned_cols=48  Identities=27%  Similarity=0.319  Sum_probs=32.1

Q ss_pred             HHHHHHHHHHHHhhcCCcchhhhhhhhhhhhHHHHHHHhhHHHHHHHHHHhhccc
Q 003814          728 TMMAAFAATLFIVLGDDFVWIAIPIATGACVPVSLFALLQFPLLSDMISHLYKYS  782 (793)
Q Consensus       728 ~m~~AF~~~~~~vl~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  782 (793)
                      +++.||++|+..-    ..+.+   .....+|+++|+++.+.+-++.++.+|-.+
T Consensus        11 tLlLaliaGl~~n----g~fs~---Lf~s~VpFSiFPlIaLvLavycLyQ~Yl~~   58 (120)
T PRK11056         11 TLLLALIAGLSIN----GTFAA---LFSSIVPFSIFPLIALVLAVYCLHQRYLNR   58 (120)
T ss_pred             hHHHHHHHHHhhc----hhhHH---HHccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence            4556777777632    22211   223456888999999999999998888654


No 136
>PF07226 DUF1422:  Protein of unknown function (DUF1422);  InterPro: IPR009867 This family consists of several hypothetical bacterial proteins of around 120 residues in length. The function of this family is unknown.
Probab=37.92  E-value=65  Score=28.89  Aligned_cols=47  Identities=21%  Similarity=0.259  Sum_probs=29.3

Q ss_pred             HHHHHHHHHHHhhcCCcchhhhhhhhhhhhHHHHHHHhhHHHHHHHHHHhhccc
Q 003814          729 MMAAFAATLFIVLGDDFVWIAIPIATGACVPVSLFALLQFPLLSDMISHLYKYS  782 (793)
Q Consensus       729 m~~AF~~~~~~vl~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  782 (793)
                      ++.|+++|+..    +..+.   ......+|+++|+++...+-++.++.+|-..
T Consensus        12 LlLaliaGl~~----n~~~s---~L~~s~VpFSiFPlIaLvLavy~LyQ~Yl~~   58 (117)
T PF07226_consen   12 LLLALIAGLCG----NATFS---ALFSSEVPFSIFPLIALVLAVYCLYQRYLNH   58 (117)
T ss_pred             HHHHHHHHHhc----cchhH---HHHhcccccHHHHHHHHHHHHHHHHHHHhcC
Confidence            45567777662    11111   1223446788888888888888888887644


No 137
>COG1845 CyoC Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Energy production and conversion]
Probab=34.59  E-value=2.8e+02  Score=28.07  Aligned_cols=34  Identities=21%  Similarity=0.255  Sum_probs=18.7

Q ss_pred             CccceehhHhhhHHHHHHHHHHHHHHHHHhhcccc
Q 003814          669 HYKSFMVFAVSDALALFCSATSILMFLSIITSRYA  703 (793)
Q Consensus       669 ~~~~F~~F~i~ntia~~~S~~~v~~~~~i~~~~~~  703 (793)
                      .+..|.+|+.++.+- |.++.+........+..+.
T Consensus        31 ~~~G~wvFl~SE~~~-Fa~lfaay~~~~~~~~~wp   64 (209)
T COG1845          31 GRLGFWVFLMSEVAL-FASLFAAYFVARASTAGWP   64 (209)
T ss_pred             cchHHHHHHHHHHHH-HHHHHHHHHHHHhcccCCC
Confidence            356788898888654 4444444343333333333


No 138
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=34.48  E-value=45  Score=34.82  Aligned_cols=26  Identities=8%  Similarity=-0.020  Sum_probs=16.6

Q ss_pred             hhhhhhHHHHHHHhhHHHHHHHHHHh
Q 003814          753 ATGACVPVSLFALLQFPLLSDMISHL  778 (793)
Q Consensus       753 ~~~~~~~~~~~~~~~~~~~~~~~~~~  778 (793)
                      |-++.+++.++.+.-..||+|+-+++
T Consensus       261 cgiaalvllil~vvliiLYiWlyrrR  286 (295)
T TIGR01478       261 YGIAALVLIILTVVLIILYIWLYRRR  286 (295)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            44555555566666677888876654


No 139
>PF11137 DUF2909:  Protein of unknown function (DUF2909);  InterPro: IPR021313  This is a family of proteins conserved in Proteobacteria of unknown function. 
Probab=34.12  E-value=2e+02  Score=23.02  Aligned_cols=59  Identities=20%  Similarity=0.247  Sum_probs=31.0

Q ss_pred             eehhHhhhHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003814          673 FMVFAVSDALALFCSATSILMFLSIITSRYAEEDFVHSLPNRLIIGLATLFISIATMMAAFAATL  737 (793)
Q Consensus       673 F~~F~i~ntia~~~S~~~v~~~~~i~~~~~~~~~f~~~l~~~l~~~~~~l~~s~~~m~~AF~~~~  737 (793)
                      +|+.++.=.++.+.|+.+.+.|+-  .-+-+.....++|.+|..++..+    +..+++|+.+|.
T Consensus         1 ~Ki~iv~lll~ii~sL~saL~~l~--kd~~~~~rm~~~L~~RV~lS~~l----~~lil~~~~~G~   59 (63)
T PF11137_consen    1 MKILIVLLLLAIIASLFSALFFLV--KDKGSSKRMVKALGRRVGLSALL----FLLILIALYTGW   59 (63)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHh--hCCCCCchHHHHHHHHHHHHHHH----HHHHHHHHHhCC
Confidence            355666666777777777765542  22223344555566665443322    233455666654


No 140
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=34.04  E-value=5.8e+02  Score=30.80  Aligned_cols=22  Identities=0%  Similarity=-0.159  Sum_probs=13.3

Q ss_pred             chHHHHHHHhCcHHHHHHHHhc
Q 003814          277 DTALHIAAGARRTLFVQELVNL  298 (793)
Q Consensus       277 ~TpLh~Aa~~g~~eiVk~LL~~  298 (793)
                      .+.+..-++.|+.+-+..+.+.
T Consensus       263 n~Li~~y~k~g~~~~A~~vf~~  284 (697)
T PLN03081        263 CALIDMYSKCGDIEDARCVFDG  284 (697)
T ss_pred             HHHHHHHHHCCCHHHHHHHHHh
Confidence            3445555666776666666663


No 141
>COG4298 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.06  E-value=77  Score=26.60  Aligned_cols=50  Identities=14%  Similarity=-0.002  Sum_probs=30.6

Q ss_pred             ehhHhhhHHHHHHHHHHHHHHHHHhhcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 003814          674 MVFAVSDALALFCSATSILMFLSIITSRYAEEDFVHSLPNRLIIGLATLFISIATMMAAFAATLFIVLG  742 (793)
Q Consensus       674 ~~F~i~ntia~~~S~~~v~~~~~i~~~~~~~~~f~~~l~~~l~~~~~~l~~s~~~m~~AF~~~~~~vl~  742 (793)
                      .++++++.+||-.|.....+=+..+|     .|    +..|          .-.+|.++|.+|.-+.+.
T Consensus        14 pawi~f~waafg~s~~m~~~gi~~lP-----VD----~w~K----------Gy~~MG~lfltgSt~tL~   63 (95)
T COG4298          14 PAWIMFNWAAFGASYFMLGLGIWLLP-----VD----LWTK----------GYWAMGILFLTGSTVTLV   63 (95)
T ss_pred             chhHhHHHHHHHHHHHHHHHHhheec-----hH----HHHH----------HHHHHHHHHHhcchhhhh
Confidence            47888999999998876543222222     11    2222          224567788888877664


No 142
>PF10966 DUF2768:  Protein of unknown function (DUF2768);  InterPro: IPR020076 This entry contains proteins with no known function.
Probab=31.39  E-value=91  Score=24.44  Aligned_cols=35  Identities=14%  Similarity=0.277  Sum_probs=19.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcC---Ccchhhhhhhhhh
Q 003814          722 LFISIATMMAAFAATLFIVLGD---DFVWIAIPIATGA  756 (793)
Q Consensus       722 l~~s~~~m~~AF~~~~~~vl~~---~~~w~~~~~~~~~  756 (793)
                      ||+|..+|..=|.+.....+++   +.+|+...+.+++
T Consensus         2 MWiS~~~iglMfisv~~i~~sR~Klk~~~lk~i~~~vA   39 (58)
T PF10966_consen    2 MWISFGAIGLMFISVILIYFSRYKLKGKFLKFIVSLVA   39 (58)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence            4566666666666666655543   3346555444433


No 143
>KOG4026 consensus Uncharacterized conserved protein [Function unknown]
Probab=30.87  E-value=5.6e+02  Score=25.66  Aligned_cols=54  Identities=30%  Similarity=0.338  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHhHhhccCCCCCCCC-CC------------ccc-------------ccC--ccceehhHhhhHHHHHHHHH
Q 003814          638 VVATLIATVMFAAAFTVPGGNDDS-TG------------RPI-------------FLH--YKSFMVFAVSDALALFCSAT  689 (793)
Q Consensus       638 vvA~LIATVtFaA~ft~PGG~~~~-~G------------~~~-------------l~~--~~~F~~F~i~ntia~~~S~~  689 (793)
                      ..-++.++|.|..+|-.|-...++ .|            .|.             ...  ...|++=.++..+||..++.
T Consensus        14 ~l~t~c~a~l~~v~fi~P~Wig~~~~~~~g~fGl~~~C~~~~~~~~~~~~~~~~~~~~ips~~~~~a~f~vlla~~Lill   93 (207)
T KOG4026|consen   14 ALCTICFAVLFMVAFIQPYWIGDSVNGKPGSFGLFTYCVGPVLPGSLECRGRLASFSSIPSNEFKLAAFFVLLAFVLILL   93 (207)
T ss_pred             HHHHHHHHHHHHHHhccceeccCCcCCCCccccceeeccCCCCCCcccccCCccccccCCcHHHHHHHHHHHHHHHHHHH
Confidence            445677888999999999432211 11            122             221  34577777788888887774


Q ss_pred             HH
Q 003814          690 SI  691 (793)
Q Consensus       690 ~v  691 (793)
                      .+
T Consensus        94 ~i   95 (207)
T KOG4026|consen   94 LI   95 (207)
T ss_pred             HH
Confidence            44


No 144
>PF05313 Pox_P21:  Poxvirus P21 membrane protein;  InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=29.93  E-value=2.1e+02  Score=27.96  Aligned_cols=29  Identities=17%  Similarity=0.380  Sum_probs=19.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003814          713 NRLIIGLATLFISIATMMAAFAATLFIVL  741 (793)
Q Consensus       713 ~~l~~~~~~l~~s~~~m~~AF~~~~~~vl  741 (793)
                      .-++++.+.+++.+.++++||++++-.+=
T Consensus        82 alimi~iAs~llP~PsLVIaYCl~mqi~~  110 (189)
T PF05313_consen   82 ALIMIIIASLLLPFPSLVIAYCLSMQIYN  110 (189)
T ss_pred             HHHHHHHHHHHcCccHHHHHHHHHheeec
Confidence            33455566666777788888888876553


No 145
>PF07344 Amastin:  Amastin surface glycoprotein;  InterPro: IPR009944 This family contains the eukaryotic surface glycoprotein amastin (approximately 180 residues long).In Trypanosoma cruzi, amastin is particularly abundant during the amastigote stage.
Probab=28.19  E-value=2.2e+02  Score=27.19  Aligned_cols=40  Identities=23%  Similarity=0.342  Sum_probs=28.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcchhhhhh
Q 003814          713 NRLIIGLATLFISIATMMAAFAATLFIVLG-DDFVWIAIPI  752 (793)
Q Consensus       713 ~~l~~~~~~l~~s~~~m~~AF~~~~~~vl~-~~~~w~~~~~  752 (793)
                      .++..+-++-.+|+....+||+.|+.+... +..+|+..+.
T Consensus        60 ~~f~aa~afaIisi~~~~~a~v~g~~~l~~~~~~r~v~l~L  100 (155)
T PF07344_consen   60 SRFRAAQAFAIISIFVYGAAFVLGVLLLCCCSCLRWVCLVL  100 (155)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence            445566777778888888888888887776 5667765544


No 146
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=28.16  E-value=15  Score=42.12  Aligned_cols=31  Identities=29%  Similarity=0.324  Sum_probs=24.4

Q ss_pred             cCCcccCCCCCchHHHHHHHcCCHHHHHHHH
Q 003814          231 SGGVERNCFTSYAPLHLAALKGDWDFARNFF  261 (793)
Q Consensus       231 ~~~~~~~d~~g~T~Lh~Aa~~G~~~~v~~LL  261 (793)
                      ...+++....++++.+.+...|+...+....
T Consensus        45 ~~gi~~~~s~~~~~~~l~~~~g~~~~~~~a~   75 (503)
T KOG0513|consen   45 SRGINQGVSLAYLELRLQNIDGDPSAARLAD   75 (503)
T ss_pred             ceehhhhhhhcccHHHHHhccCChHhhHhhh
Confidence            3466777888889999999999998776544


No 147
>PF13903 Claudin_2:  PMP-22/EMP/MP20/Claudin tight junction
Probab=26.72  E-value=4.2e+02  Score=24.94  Aligned_cols=33  Identities=15%  Similarity=0.218  Sum_probs=22.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhh
Q 003814          717 IGLATLFISIATMMAAFAATLFIVLGDDFVWIA  749 (793)
Q Consensus       717 ~~~~~l~~s~~~m~~AF~~~~~~vl~~~~~w~~  749 (793)
                      ....++.+++..+++|+..+++....+..++..
T Consensus        70 ~~~~~~~l~~~~~~~a~~~~~~~~~~~~~~~~~  102 (172)
T PF13903_consen   70 ATIAFLILGLLLLLFAFVFALIGFCKRSYTLYL  102 (172)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccccchhH
Confidence            334566778888888888888877655544433


No 148
>PLN03218 maturation of RBCL 1; Provisional
Probab=25.64  E-value=3.3e+02  Score=34.83  Aligned_cols=149  Identities=14%  Similarity=0.018  Sum_probs=78.0

Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCCccccccCCC-CCchHHHHHHHhCcHHHHHHHHhcCC----CCcccccccCCChHHHH
Q 003814          243 APLHLAALKGDWDFARNFFNLNPEAVCVRISR-NQDTALHIAAGARRTLFVQELVNLMT----PEDLALRNKVGNTALCF  317 (793)
Q Consensus       243 T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~-~g~TpLh~Aa~~g~~eiVk~LL~~~~----gad~~~~d~~G~TpLh~  317 (793)
                      +.+...++.|+.+.+..+++.-... ....|. .-.+.+...++.|..+-+..+++.+.    |..++.  ..-.+-+..
T Consensus       512 aLI~gy~k~G~~eeAl~lf~~M~~~-Gv~PD~vTYnsLI~a~~k~G~~deA~~lf~eM~~~~~gi~PD~--vTynaLI~a  588 (1060)
T PLN03218        512 ALIDGCARAGQVAKAFGAYGIMRSK-NVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDH--ITVGALMKA  588 (1060)
T ss_pred             HHHHHHHHCcCHHHHHHHHHHHHHc-CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhcCCCCCcH--HHHHHHHHH
Confidence            5666778889988766555421100 001122 23456677778888887777666432    222321  122345556


Q ss_pred             HHHhCcHHHHHHHH----hCCCCCCCCCCCCCC-CHHHHHHHcCCHHHH----HHHHhcCCCCCcccccCchHHHHHHHc
Q 003814          318 AAVSGVTKIAEVMV----NKNRELPSIRGNKGA-TPLCMAALLGHKEMI----WYLYSVTKEEDLKEEDRIELLVAVIDA  388 (793)
Q Consensus       318 Aa~~g~~~iv~~Ll----~~g~~~~~~~~~~G~-TpLh~Aa~~g~~eiv----~~Ll~~gad~n~~~~~g~t~Lh~A~~~  388 (793)
                      .++.|+.+-+..+.    +.|...    +..-. +.+...++.|+.+-+    +.+.+.|..++...  -.+.+...+..
T Consensus       589 y~k~G~ldeA~elf~~M~e~gi~p----~~~tynsLI~ay~k~G~~deAl~lf~eM~~~Gv~PD~~T--ynsLI~a~~k~  662 (1060)
T PLN03218        589 CANAGQVDRAKEVYQMIHEYNIKG----TPEVYTIAVNSCSQKGDWDFALSIYDDMKKKGVKPDEVF--FSALVDVAGHA  662 (1060)
T ss_pred             HHHCCCHHHHHHHHHHHHHcCCCC----ChHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHhC
Confidence            67778876555444    343322    22222 334455667775544    44445665554221  23455666677


Q ss_pred             CChhHHHHHHhh
Q 003814          389 GLYDVALDLIQH  400 (793)
Q Consensus       389 g~~eiv~~LL~~  400 (793)
                      |..+-+..+++.
T Consensus       663 G~~eeA~~l~~e  674 (1060)
T PLN03218        663 GDLDKAFEILQD  674 (1060)
T ss_pred             CCHHHHHHHHHH
Confidence            777655555443


No 149
>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism]
Probab=24.47  E-value=2.5e+02  Score=30.33  Aligned_cols=20  Identities=5%  Similarity=0.107  Sum_probs=16.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHh
Q 003814          721 TLFISIATMMAAFAATLFIV  740 (793)
Q Consensus       721 ~l~~s~~~m~~AF~~~~~~v  740 (793)
                      +..+|+..+..+|++|+|=+
T Consensus       265 LTi~s~iflPpTlIagiyGM  284 (322)
T COG0598         265 LTIVSTIFLPPTLITGFYGM  284 (322)
T ss_pred             HHHHHHHHHhhHHHHccccc
Confidence            44578889999999999954


No 150
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=24.41  E-value=1.3e+03  Score=27.78  Aligned_cols=145  Identities=13%  Similarity=0.017  Sum_probs=80.9

Q ss_pred             chHHHHHHHcCCHHHHHHHHhcCCccccccCCCCCch-HHHHHHHhCcHHHHHHHHhcC--CCCcccccccCCChHHHHH
Q 003814          242 YAPLHLAALKGDWDFARNFFNLNPEAVCVRISRNQDT-ALHIAAGARRTLFVQELVNLM--TPEDLALRNKVGNTALCFA  318 (793)
Q Consensus       242 ~T~Lh~Aa~~G~~~~v~~LL~~~~~~~~~~~d~~g~T-pLh~Aa~~g~~eiVk~LL~~~--~gad~~~~d~~G~TpLh~A  318 (793)
                      .+.+..-++.|+.+.+..+++.-+.     .|..-++ .+..-++.|+.+-+..+++.+  .|..++...  -.+.+...
T Consensus       263 n~Li~~y~k~g~~~~A~~vf~~m~~-----~~~vt~n~li~~y~~~g~~~eA~~lf~~M~~~g~~pd~~t--~~~ll~a~  335 (697)
T PLN03081        263 CALIDMYSKCGDIEDARCVFDGMPE-----KTTVAWNSMLAGYALHGYSEEALCLYYEMRDSGVSIDQFT--FSIMIRIF  335 (697)
T ss_pred             HHHHHHHHHCCCHHHHHHHHHhCCC-----CChhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHH
Confidence            4567788899999998888875332     1333334 444556778776655555432  344443321  12344445


Q ss_pred             HHhCcHHHH----HHHHhCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcccccCchH-HHHHHHcCChhH
Q 003814          319 AVSGVTKIA----EVMVNKNRELPSIRGNKGATPLCMAALLGHKEMIWYLYSVTKEEDLKEEDRIEL-LVAVIDAGLYDV  393 (793)
Q Consensus       319 a~~g~~~iv----~~Ll~~g~~~~~~~~~~G~TpLh~Aa~~g~~eiv~~Ll~~gad~n~~~~~g~t~-Lh~A~~~g~~ei  393 (793)
                      ++.|..+-+    +.+++.|...+.   .-..+-+..-++.|+.+-++.+++.-...|.   .-++. +...++.|+.+-
T Consensus       336 ~~~g~~~~a~~i~~~m~~~g~~~d~---~~~~~Li~~y~k~G~~~~A~~vf~~m~~~d~---~t~n~lI~~y~~~G~~~~  409 (697)
T PLN03081        336 SRLALLEHAKQAHAGLIRTGFPLDI---VANTALVDLYSKWGRMEDARNVFDRMPRKNL---ISWNALIAGYGNHGRGTK  409 (697)
T ss_pred             HhccchHHHHHHHHHHHHhCCCCCe---eehHHHHHHHHHCCCHHHHHHHHHhCCCCCe---eeHHHHHHHHHHcCCHHH
Confidence            566665544    444555543321   1233445555788998888888776544332   23444 445567777755


Q ss_pred             HHHHHh
Q 003814          394 ALDLIQ  399 (793)
Q Consensus       394 v~~LL~  399 (793)
                      +..+++
T Consensus       410 A~~lf~  415 (697)
T PLN03081        410 AVEMFE  415 (697)
T ss_pred             HHHHHH
Confidence            555544


No 151
>PF14126 DUF4293:  Domain of unknown function (DUF4293)
Probab=24.21  E-value=6.2e+02  Score=24.00  Aligned_cols=14  Identities=21%  Similarity=0.377  Sum_probs=6.4

Q ss_pred             HHHHHHHHHHHHhh
Q 003814          686 CSATSILMFLSIIT  699 (793)
Q Consensus       686 ~S~~~v~~~~~i~~  699 (793)
                      +.+++++-+++|+.
T Consensus        60 ~~l~~~lal~aIFl   73 (149)
T PF14126_consen   60 LVLSAILALIAIFL   73 (149)
T ss_pred             HHHHHHHHHHHHHc
Confidence            33444444555543


No 152
>KOG3462 consensus Predicted membrane protein [Function unknown]
Probab=23.89  E-value=3.9e+02  Score=23.02  Aligned_cols=14  Identities=14%  Similarity=0.311  Sum_probs=10.9

Q ss_pred             hhHHHHHHHHHHHH
Q 003814          679 SDALALFCSATSIL  692 (793)
Q Consensus       679 ~ntia~~~S~~~v~  692 (793)
                      .|.+++++|++-+.
T Consensus        36 mn~lgmIfsmcGlM   49 (105)
T KOG3462|consen   36 MNFLGMIFSMCGLM   49 (105)
T ss_pred             HHHHHHHHHHHHHH
Confidence            67888888888763


No 153
>cd06855 GT_GPT_euk UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is essential for eukaryotic N-glycosylation. GPT activity has been identified in all eukaryotic cells examined to date. A series of six conserved motifs designated A through F, ranging in length from 5 to 13 amino acid residues, has been identified in this family. They have been determined to be important for stable expression, substrate binding, or catalytic activities.
Probab=23.79  E-value=1.5e+02  Score=31.43  Aligned_cols=61  Identities=15%  Similarity=0.139  Sum_probs=36.9

Q ss_pred             HHHHHHHHHHHHHHHhhcCCcchhhhhhhhhhhhHHHHHHHhhHHHHHHHHHHh-hccccccccccc
Q 003814          725 SIATMMAAFAATLFIVLGDDFVWIAIPIATGACVPVSLFALLQFPLLSDMISHL-YKYSIFTRRSNH  790 (793)
Q Consensus       725 s~~~m~~AF~~~~~~vl~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  790 (793)
                      -..||.+.|+.|...++... .+    ......+|..+++++.+|.+..++++. .|+..|..++++
T Consensus       218 D~GSl~LG~~la~~~i~~~~-~~----~~~~~~~p~~~~~~l~~P~~~~~~~r~~~~~~~~~~d~~h  279 (283)
T cd06855         218 DTFTYFAGMVFAVVGILGHF-SK----TLLLFFIPQIINFLYSLPQLFGIVPCPRHRLPKFNPKTGL  279 (283)
T ss_pred             chHHHHHHHHHHHHHHHHhh-HH----HHHHHHHHHHHHHHHHHhHhheeeeccccCCCCCCCCcCC
Confidence            44556666666666665432 11    122334577777888888877777664 666666666554


No 154
>PRK12585 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=22.63  E-value=5.4e+02  Score=25.51  Aligned_cols=24  Identities=29%  Similarity=0.513  Sum_probs=15.4

Q ss_pred             hHHHHHHHhhHHHHHHHHHHh-hcc
Q 003814          758 VPVSLFALLQFPLLSDMISHL-YKY  781 (793)
Q Consensus       758 ~~~~~~~~~~~~~~~~~~~~~-~~~  781 (793)
                      +.+.+|+++--|.-.+++.+. |+.
T Consensus        71 LLiIvFllLTaPVaSHaIARAAyr~   95 (197)
T PRK12585         71 LLAVLFIFLTTPVASHLINRAAYDT   95 (197)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            345566777778887776654 433


No 155
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=22.56  E-value=4.5e+02  Score=25.53  Aligned_cols=16  Identities=6%  Similarity=0.189  Sum_probs=8.1

Q ss_pred             HHHHHHHHHHHHHHHH
Q 003814          720 ATLFISIATMMAAFAA  735 (793)
Q Consensus       720 ~~l~~s~~~m~~AF~~  735 (793)
                      ..+.+...+|.++|..
T Consensus       151 r~~~~G~~aa~it~~i  166 (169)
T TIGR00267       151 KMVVIGLLVAVVSLLI  166 (169)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            3444555555555543


No 156
>PF02932 Neur_chan_memb:  Neurotransmitter-gated ion-channel transmembrane region ion channel family signature gamma-aminobutyric acid (GABA) receptor signature nicotinic acetylcholine receptor signature;  InterPro: IPR006029 Neurotransmitter ligand-gated ion channels are transmembrane receptor-ion channel complexes that open transiently upon binding of specific ligands, allowing rapid transmission of signals at chemical synapses [, ]. Five of these ion channel receptor families have been shown to form a sequence-related superfamily:   Nicotinic acetylcholine receptor (AchR), an excitatory cation channel in vertebrates and invertebrates; in vertebrate motor endplates it is composed of alpha, beta, gamma and delta/epsilon subunits; in neurons it is composed of alpha and non-alpha (or beta) subunits []. Glycine receptor, an inhibitory chloride ion channel composed of alpha and beta subunits []. Gamma-aminobutyric acid (GABA) receptor, an inhibitory chloride ion channel; at least four types of subunits (alpha, beta, gamma and delta) are known []. Serotonin 5HT3 receptor, of which there are seven major types (5HT3-5HT7) []. Glutamate receptor, an excitatory cation channel of which at least three types have been described (kainate, N-methyl-D-aspartate (NMDA) and quisqualate) [].   These receptors possess a pentameric structure (made up of varying subunits), surrounding a central pore. All known sequences of subunits from neurotransmitter-gated ion-channels are structurally related. They are composed of a large extracellular glycosylated N-terminal ligand-binding domain, followed by three hydrophobic transmembrane regions which form the ionic channel, followed by an intracellular region of variable length. A fourth hydrophobic region is found at the C-terminal of the sequence [, ]. This domain represents four transmembrane helices of a variety of neurotransmitter-gated ion-channels.; GO: 0006811 ion transport, 0016020 membrane; PDB: 1DXZ_A 3MRA_A 1EQ8_C 1OED_C 2PR9_P 1A11_A 1CEK_A 2BG9_E 2KSR_A 2K59_B ....
Probab=22.48  E-value=4e+02  Score=25.61  Aligned_cols=44  Identities=16%  Similarity=-0.001  Sum_probs=20.0

Q ss_pred             HHHHHHHHhhcCCcchhhhhhhhhhhhHHHHHHHhhHHHHHHHH
Q 003814          732 AFAATLFIVLGDDFVWIAIPIATGACVPVSLFALLQFPLLSDMI  775 (793)
Q Consensus       732 AF~~~~~~vl~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~  775 (793)
                      .|...+.-.+|+.+.-.++.....+|+.+.+.+++-+-.++..+
T Consensus        39 ~~~~~~~~~lP~~s~~~pl~~~~~~~~~~v~~~~~~~avv~~~~   82 (237)
T PF02932_consen   39 VFLLMVAENLPPTSYAKPLDGWYFICTMFVFSASLEFAVVVYNI   82 (237)
T ss_dssp             HHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhhhhhcccccccchhhhhccccchhhhHHHHhhhhhhhh
Confidence            34555555566644333443444444444444444444333333


No 157
>PF12304 BCLP:  Beta-casein like protein;  InterPro: IPR020977  This entry represents eukaryotic proteins that are typically between 216 to 240 amino acids in length which have two conserved sequence motifs: VLR and TRIY. Beta-casein-like protein is associated with cell morphology and a regulation of growth pattern of tumours. It is found in adenocarcinomas of uterine cervical tissues[]. 
Probab=22.23  E-value=2.9e+02  Score=27.12  Aligned_cols=31  Identities=26%  Similarity=0.425  Sum_probs=23.1

Q ss_pred             ehhHhhhHHHHHHHHHHHHH-HHHHhhcccch
Q 003814          674 MVFAVSDALALFCSATSILM-FLSIITSRYAE  704 (793)
Q Consensus       674 ~~F~i~ntia~~~S~~~v~~-~~~i~~~~~~~  704 (793)
                      .-|.++|.+|..+-+.+|.. ...|+.||+..
T Consensus        38 ~eY~vsNiisv~Sgll~I~~GI~AIvlSrnl~   69 (188)
T PF12304_consen   38 LEYAVSNIISVTSGLLSIICGIVAIVLSRNLR   69 (188)
T ss_pred             ehhhHHHHHHHHHHHHHHHHhHHHHhhhccCC
Confidence            46789999999998888765 44566677654


No 158
>PRK09546 zntB zinc transporter; Reviewed
Probab=21.94  E-value=1.6e+02  Score=31.90  Aligned_cols=20  Identities=20%  Similarity=0.336  Sum_probs=15.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHh
Q 003814          721 TLFISIATMMAAFAATLFIV  740 (793)
Q Consensus       721 ~l~~s~~~m~~AF~~~~~~v  740 (793)
                      +.++++.+|...|++|+|=+
T Consensus       267 Ltilt~IflPlT~IaGiyGM  286 (324)
T PRK09546        267 MSLMAMVFLPTTFLTGLFGV  286 (324)
T ss_pred             HHHHHHHHHHHHHHHhhhcc
Confidence            44567788899999999943


No 159
>PF10943 DUF2632:  Protein of unknown function (DUF2632);  InterPro: IPR024251 This is a family of potential membrane proteins that may be components of the viral envelope.
Probab=21.87  E-value=2.5e+02  Score=26.09  Aligned_cols=56  Identities=16%  Similarity=0.218  Sum_probs=28.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCcchhhhhhhhhhhhHHHHHHHhhHHHHHHHHHHh
Q 003814          721 TLFISIATMMAAFAATLFIVLGDDFVWIAIPIATGACVPVSLFALLQFPLLSDMISHL  778 (793)
Q Consensus       721 ~l~~s~~~m~~AF~~~~~~vl~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  778 (793)
                      .+|+|+.++.+||..--.+..  ..-|....++.+..+...+..+..|.-++.++++|
T Consensus        71 wlflsltslaiaywwlpsmtf--tgywaltviatilvlvmlimmfvkfinfvklfyrt  126 (233)
T PF10943_consen   71 WLFLSLTSLAIAYWWLPSMTF--TGYWALTVIATILVLVMLIMMFVKFINFVKLFYRT  126 (233)
T ss_pred             HHHHHHHHHHHHHHhccccce--ehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            477899999888865332221  22464444443333333333334444455555544


No 160
>PF04535 DUF588:  Domain of unknown function (DUF588);  InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.
Probab=20.55  E-value=7.1e+02  Score=23.35  Aligned_cols=34  Identities=15%  Similarity=0.264  Sum_probs=28.4

Q ss_pred             CCcccccCccceehhHhhhHHHHHHHHHHHHHHH
Q 003814          662 TGRPIFLHYKSFMVFAVSDALALFCSATSILMFL  695 (793)
Q Consensus       662 ~G~~~l~~~~~F~~F~i~ntia~~~S~~~v~~~~  695 (793)
                      .++.-+.+-++|..|+..|.++...|+..++.-+
T Consensus        38 ~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~   71 (149)
T PF04535_consen   38 QFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSI   71 (149)
T ss_pred             ccceeecccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4566677889999999999999999998876644


Done!