Your job contains 1 sequence.
>003822
MATDIHTLEQRYFDSCRRHDVLPNPAILSGFFKADVRKSQNEPCTLEIILEYLKDIDFQP
LLEVCMQIGATEIEAVDVRSGTSCMLTGEFALSLMHAIDQKLRVVDLHDSSFGKDFIRNL
SQRGLMCEVLNLRSSRFRKLNMIGEFKRIHTLNLDYSTSLTSFKEDCFSCMPNLICLSMC
ETRVGNLWTTIAALSKLPSLAELRFQNWLCCDDTGNSSGSSDQDDKTDFSQLNICSSFGA
YGNVVINPDSQILVEDSSDDSEVDFSIQHREYDYLELLSNLVPQLDGEIDLWNEVSFDAF
SNQNEEESSAGVLARCTADVSLKYISCHASPICFEKHYRDYMIASLPKLKFLDNLPIRKV
DRERATITYSQYFEHLPYGRKHKESVVSILQQREIKASQTRGKTSRHKTSYPSGMSQYFY
TRSLCAAKVGSSAWPCLHTLTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVV
VNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHY
GAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVK
FSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNE
VRQLLAVDGRVHLNFGITATGSSQNYTRSYYLNGRDYIVSGSCDEHVVRICCAQTGRRLR
DISLEGKGSGTSMFVQSLRGDPFRDFNMSILAAYTRPSSKSEIVKVNLLASTDHCDKECS
HGQHSRPSRSMGG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003822
(793 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2116179 - symbol:AT4G34280 "AT4G34280" species... 2106 5.0e-218 1
FB|FBgn0039867 - symbol:CstF-50 "CstF-50" species:7227 "D... 154 1.3e-07 1
MGI|MGI:1914587 - symbol:Cstf1 "cleavage stimulation fact... 153 1.7e-07 1
RGD|1309267 - symbol:Cstf1 "cleavage stimulation factor, ... 153 1.7e-07 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 149 2.6e-07 1
UNIPROTKB|E2R0N2 - symbol:DDB2 "Uncharacterized protein" ... 151 2.8e-07 1
UNIPROTKB|Q05048 - symbol:CSTF1 "Cleavage stimulation fac... 150 3.6e-07 1
UNIPROTKB|Q92466 - symbol:DDB2 "DNA damage-binding protei... 144 1.6e-06 1
WB|WBGene00009341 - symbol:thoc-3 species:6239 "Caenorhab... 141 2.0e-06 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 140 2.7e-06 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 141 3.2e-06 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 141 3.2e-06 1
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 141 6.8e-06 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 144 9.7e-06 2
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 133 1.2e-05 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 128 1.3e-05 1
UNIPROTKB|B0W517 - symbol:CPIJ001500 "Ribosome biogenesis... 127 1.7e-05 2
MGI|MGI:1915086 - symbol:Wdr83 "WD repeat domain containi... 131 2.3e-05 1
UNIPROTKB|E1BQV9 - symbol:KATNB1 "Katanin p80 WD40 repeat... 136 2.4e-05 1
UNIPROTKB|E3W9A3 - symbol:KATNB1 "Katanin p80 WD40 repeat... 136 2.4e-05 1
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 136 2.4e-05 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 132 2.4e-05 1
UNIPROTKB|Q17BB0 - symbol:AAEL005041 "Ribosome biogenesis... 133 2.6e-05 1
ZFIN|ZDB-GENE-030131-2958 - symbol:cstf1 "cleavage stimul... 133 2.6e-05 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 130 2.9e-05 1
RGD|1306947 - symbol:Wdr83 "WD repeat domain 83" species:... 130 3.0e-05 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 130 3.4e-05 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 130 3.4e-05 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 130 3.4e-05 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 130 3.4e-05 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 130 3.4e-05 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 124 3.7e-05 1
TAIR|locus:2029939 - symbol:PEX7 "AT1G29260" species:3702... 129 4.0e-05 1
POMBASE|SPBC1A4.07c - symbol:SPBC1A4.07c "U3 snoRNP-assoc... 131 4.4e-05 1
DICTYBASE|DDB_G0284101 - symbol:snrpA1 "U2 small nuclear ... 86 4.6e-05 2
UNIPROTKB|F1SEX9 - symbol:WDR83 "Uncharacterized protein"... 128 4.9e-05 1
UNIPROTKB|Q9BRX9 - symbol:WDR83 "WD repeat domain-contain... 128 5.0e-05 1
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 130 5.4e-05 1
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 130 5.4e-05 1
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 130 5.4e-05 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 129 6.0e-05 1
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 129 7.0e-05 1
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 129 7.0e-05 1
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 129 7.0e-05 1
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 129 7.0e-05 1
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 129 7.0e-05 1
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 129 7.0e-05 1
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 129 7.0e-05 1
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 129 7.0e-05 1
UNIPROTKB|B4LS78 - symbol:GJ17641 "Ribosome biogenesis pr... 117 7.9e-05 2
UNIPROTKB|Q0VCN2 - symbol:MORG1 "Mitogen-activated protei... 126 8.4e-05 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 128 9.0e-05 1
UNIPROTKB|B3N534 - symbol:GG10358 "Ribosome biogenesis pr... 122 9.4e-05 2
UNIPROTKB|B4P116 - symbol:GE13328 "Ribosome biogenesis pr... 122 9.4e-05 2
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 138 9.9e-05 2
UNIPROTKB|B4GT01 - symbol:GL26386 "Ribosome biogenesis pr... 118 9.9e-05 2
UNIPROTKB|Q29KQ0 - symbol:GA19813 "Ribosome biogenesis pr... 118 9.9e-05 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 125 0.00011 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 129 0.00011 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 125 0.00012 1
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 127 0.00012 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 129 0.00013 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 129 0.00013 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 129 0.00013 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 129 0.00014 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 129 0.00014 1
UNIPROTKB|E2RRL3 - symbol:WDR83 "Uncharacterized protein"... 124 0.00014 1
ASPGD|ASPL0000002074 - symbol:rcoA species:162425 "Emeric... 128 0.00014 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 126 0.00014 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 126 0.00014 1
POMBASE|SPBC713.04c - symbol:SPBC713.04c "U3 snoRNP-assoc... 132 0.00014 2
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 126 0.00015 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 126 0.00015 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 126 0.00015 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 126 0.00015 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 126 0.00015 1
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 126 0.00015 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 126 0.00015 1
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 126 0.00015 1
TAIR|locus:2025762 - symbol:DRS1 "AT1G80710" species:3702... 127 0.00016 1
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 126 0.00017 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 126 0.00017 1
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 125 0.00019 1
WB|WBGene00000773 - symbol:cpf-1 species:6239 "Caenorhabd... 125 0.00019 1
MGI|MGI:1355314 - symbol:Ddb2 "damage specific DNA bindin... 125 0.00020 1
FB|FBgn0032298 - symbol:CG6724 species:7227 "Drosophila m... 119 0.00020 2
POMBASE|SPBC713.05 - symbol:SPBC713.05 "WD repeat protein... 121 0.00026 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 123 0.00030 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 125 0.00031 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 126 0.00031 1
SGD|S000000909 - symbol:GLE2 "RNA export factor associate... 122 0.00031 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 122 0.00032 1
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 123 0.00032 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 124 0.00033 1
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 124 0.00033 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 121 0.00034 1
UNIPROTKB|B4JPT9 - symbol:GH13339 "Ribosome biogenesis pr... 112 0.00035 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 130 0.00037 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 122 0.00038 1
UNIPROTKB|B3MJV8 - symbol:GF14067 "Ribosome biogenesis pr... 116 0.00041 2
WARNING: Descriptions of 19 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2116179 [details] [associations]
symbol:AT4G34280 "AT4G34280" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR003603 SMART:SM00446
GO:GO:0080008 EMBL:BT005961 EMBL:AK117309 IPI:IPI00539348
RefSeq:NP_195154.2 UniGene:At.31517 ProteinModelPortal:Q8GYY7
SMR:Q8GYY7 PRIDE:Q8GYY7 EnsemblPlants:AT4G34280.1 GeneID:829578
KEGG:ath:AT4G34280 TAIR:At4g34280 eggNOG:NOG273125
HOGENOM:HOG000090341 InParanoid:Q8GYY7 OMA:HQEHINV PhylomeDB:Q8GYY7
ProtClustDB:CLSN2680256 Genevestigator:Q8GYY7 Uniprot:Q8GYY7
Length = 783
Score = 2106 (746.4 bits), Expect = 5.0e-218, P = 5.0e-218
Identities = 441/800 (55%), Positives = 550/800 (68%)
Query: 3 TDIHTLEQRYFDSCRRHDVLPNPAILSGFFKADVRKSQNEPCTLEIILEYLKDIDFQPLL 62
T+I TLE++Y + C+ H +LPN AILS FF+A+V+KS+N+ C + + ++ +K D+ PLL
Sbjct: 5 TEIATLEEKYIELCKMHGILPNTAILSAFFEAEVKKSRNQRCIMNLYVDRVKYDDYLPLL 64
Query: 63 EVCMQIGATEIEAVDVRSGTSCMLTGEFALSLMHAIDQKLRVVDLHDSSFGKDFIRNLSQ 122
E+C +I +E++ +D+ ++C L +AL L+ +++QKLRVV LHDS FGK+F +++
Sbjct: 65 ELCNEINTSEVQGIDLFVRSACSLEDHYALPLIRSVNQKLRVVHLHDS-FGKNFWQDVFF 123
Query: 123 RGLMCEVLNLRSSRFRKLNMIGEFKRIHTLNLDYSTSLTSFKEDCFSCMPNLICLSMCET 182
+GL C+VLN+RS KLN++GEF ++HTL LD + F EDCFSCMP L LSMC+T
Sbjct: 124 QGLSCKVLNVRSMHIHKLNIVGEFTQLHTLILD-KNRIVGFGEDCFSCMPKLTYLSMCDT 182
Query: 183 RVGNLWTTIAALSKLPSLAELRFQNWLCCDDTG-----NSSGSSDQDDKTDFSQLNICSS 237
V +LWT+ AAL KLPSL ELRFQ W+ C D+ +S SS +DD F + +
Sbjct: 183 LVSDLWTSAAALLKLPSLKELRFQIWISCSDSSPLNSESSPSSSTKDDINTFIESDPPVE 242
Query: 238 FGAYGNVVINPDSQILXXXXXXXXXXXXXIQHREYDYLELLSNLVPQLDGEIDLWNEVSF 297
+ +V D + I E D L+ ++ L+GE+ + +V
Sbjct: 243 ADMW-DVAEQMDPSLPVEETLHSMDFSYKIP--EQDDLDSHVSVSAGLNGEVLMREKVRR 299
Query: 298 DAFSNQNEEESSAGVLARCTADVSLKYISCHASPICFEKHYRDYMIASLPKLKFLDNLPI 357
Q ++ S R +V LKYIS ASPIC EKHYR YMI SLPKL+ LDNL I
Sbjct: 300 GKMPYQPKDVSPVDTFTRQFGNVGLKYISSKASPICSEKHYRMYMINSLPKLQVLDNLAI 359
Query: 358 RKVDRERATITYSQYFEHLPYGRKHKESVVSILQQREIKASQTRGKTSRHKTSYPSGMSQ 417
RK DR++A TYS FE LPY RK KESVV +L+ RE ++S+ G SQ
Sbjct: 360 RKSDRDKAIETYSANFEDLPYKRK-KESVVRVLENREKRSSK--------------GKSQ 404
Query: 418 YFYTRSLCAAKVGSSAWPCLHTLTVSGNHMG--DENRSFRPRQFEYHPSISCLMVFGTLD 475
Y RSLCAAK+GS A P LH+L + + D+N PRQFEYHP LMVFGTLD
Sbjct: 405 NSYKRSLCAAKMGSPASPLLHSLPFLSSRIQQEDDNSRLCPRQFEYHPLDPSLMVFGTLD 464
Query: 476 GXXXXXXXXXXXXXSYIPSFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSI 535
G YIPS G+ +++LGLCWLK YPS +IAGS NGSLKLYDI+ ++
Sbjct: 465 GEVVVLNHESGKIFRYIPSNGSQSTILGLCWLKIYPSMVIAGSANGSLKLYDIQKASSTV 524
Query: 536 R-GMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKE 594
H +G+VTFDEFDQLTSVH NS D+LFLASGYSK++ALYDI G RLQVFA+MH+E
Sbjct: 525 TTSSHSTSGSVTFDEFDQLTSVHANSTDQLFLASGYSKDVALYDIGRGTRLQVFANMHQE 584
Query: 595 HINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLV 654
HINVVKFSNHSP +FATSSFD+DVKLWDLRQ+P +PCYTASS+KGNVMVCFSPDD YLL
Sbjct: 585 HINVVKFSNHSPFLFATSSFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRYLLA 644
Query: 655 SAVDNEVRQLLAVDGRVHLNFGITATGSSQNYTRSYYLNGRDYIVSGSCDEHVVRICCAQ 714
SAVDNEVRQLL VDGR+HLNF I SS NYTRSYY+NG DYI+SGSCDE+V+R+CCAQ
Sbjct: 645 SAVDNEVRQLLTVDGRLHLNFEIVPRVSSMNYTRSYYMNGNDYIISGSCDENVIRVCCAQ 704
Query: 715 TGRRLRDISLEGKGSGTSM-FVQSLRGDPFRDFNMSILAAYTRPSSKSEIVKVNLLASTD 773
TGRRLRD++LEG GS SM +VQSLRGDPFRDFNMS+LAAY R SS SEIVKVNLLAS D
Sbjct: 705 TGRRLRDVTLEGNGSDFSMMYVQSLRGDPFRDFNMSVLAAYARSSSLSEIVKVNLLASRD 764
Query: 774 HCDKECSHGQHSRPSRSMGG 793
+E SHG S PS SMGG
Sbjct: 765 STAEE-SHGLRSYPSSSMGG 783
>FB|FBgn0039867 [details] [associations]
symbol:CstF-50 "CstF-50" species:7227 "Drosophila
melanogaster" [GO:0005848 "mRNA cleavage stimulating factor
complex" evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006379 KO:K14406
OMA:LYDHTDE GeneTree:ENSGT00700000104487 HSSP:P46680 GO:GO:0005848
FlyBase:FBgn0039867 NextBio:835499 EMBL:AY094802 RefSeq:NP_651883.1
UniGene:Dm.11654 SMR:Q9V9V0 IntAct:Q9V9V0 MINT:MINT-287008
STRING:Q9V9V0 EnsemblMetazoa:FBtr0085865 GeneID:43734
KEGG:dme:Dmel_CG2261 UCSC:CG2261-RA CTD:43734 InParanoid:Q9V9V0
GenomeRNAi:43734 Uniprot:Q9V9V0
Length = 424
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 61/250 (24%), Positives = 115/250 (46%)
Query: 506 WLKKYPSK--LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDE 563
+L+ +P + L + S +G++KL+DI PS++ H F + + + + + +
Sbjct: 171 YLEFHPKEHILASASRDGTVKLFDIAK--PSVKKAHK-----VFTDCEPVLCLSFHPTGD 223
Query: 564 LFLASGYSKNIA-LYDINSGRRL--QVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKL 620
++A G N+ +YD+ + + + + HK + VK+S + ++AT S+D D+K+
Sbjct: 224 -YVAIGTEHNVLRVYDVATTQCFVSAIPSQQHKAGVTCVKYSP-TGKLYATGSYDGDIKI 281
Query: 621 WD-LRQKPIQPCYTASSSKGNVMVC---FSPDDHYLLVSAVDNEVRQL-LAVDGRVHLNF 675
WD + + I T + + G +C F+ + YLL S +D+ V L +
Sbjct: 282 WDGISGRCIN---TIAEAHGGAAICSLEFTRNGKYLLSSGMDSLVYLWELCTSRPIQTYT 338
Query: 676 GITATGSSQNYTRSYYLNGRDYIVSGSCDEHVVRICC--AQTGRRLRDISLEGKGSGTSM 733
G TG ++ T + + + DY++ DE +C ++ G RL SL G
Sbjct: 339 GAGTTGKQEHQTEAVFNHTEDYVLFP--DEATTSLCSWNSRNGCRLTLNSL-GHNGPVRY 395
Query: 734 FVQSLRGDPF 743
S G F
Sbjct: 396 ITHSPNGPAF 405
>MGI|MGI:1914587 [details] [associations]
symbol:Cstf1 "cleavage stimulation factor, 3' pre-RNA,
subunit 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1914587 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006397 CTD:1477 HOGENOM:HOG000234077 HOVERGEN:HBG051144
KO:K14406 OMA:LYDHTDE OrthoDB:EOG4868CD EMBL:AK011943 EMBL:AK050686
EMBL:AK078667 EMBL:AK145001 EMBL:BC003440 IPI:IPI00116747
RefSeq:NP_077161.1 UniGene:Mm.26944 ProteinModelPortal:Q99LC2
SMR:Q99LC2 STRING:Q99LC2 PhosphoSite:Q99LC2 PaxDb:Q99LC2
PRIDE:Q99LC2 DNASU:67337 Ensembl:ENSMUST00000116375 GeneID:67337
KEGG:mmu:67337 GeneTree:ENSGT00700000104487 InParanoid:Q99LC2
NextBio:324286 Bgee:Q99LC2 Genevestigator:Q99LC2
GermOnline:ENSMUSG00000027498 Uniprot:Q99LC2
Length = 431
Score = 153 (58.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 57/218 (26%), Positives = 99/218 (45%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN 573
L +GS + +LKL+D P + R Y E + L S+ + + L
Sbjct: 188 LASGSRDYTLKLFDYSK-PSAKRAFKY------IQEAEMLRSISFHPSGDFILVGTQHPT 240
Query: 574 IALYDINSGRRLQVFADMHKEHINVVKFSNHSPS--IFATSSFDQDVKLWD-LRQKPIQP 630
+ LYDIN+ + V + +H + + N++PS ++ T S D +KLWD + + I
Sbjct: 241 LRLYDINTFQCF-VSCNPQDQHTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSNRCITT 299
Query: 631 CYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVD-GRVHLNF-GITATGSSQNYTR 688
A FS + Y+L S D+ V +L + GR + + G +G + T+
Sbjct: 300 FEKAHDGAEVCSAIFSKNSKYILSSGKDS-VAKLWEISTGRTLVRYTGAGLSGRQVHRTQ 358
Query: 689 SYYLNGRDYIVSGSCDEHVVRICC--AQTGRRLRDISL 724
+ + + DYI+ DE + +CC ++T R +SL
Sbjct: 359 AVFNHTEDYILLP--DERTISLCCWDSRTAERRNLLSL 394
>RGD|1309267 [details] [associations]
symbol:Cstf1 "cleavage stimulation factor, 3' pre-RNA, subunit
1, 50kDa" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309267 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397
CTD:1477 HOGENOM:HOG000234077 HOVERGEN:HBG051144 KO:K14406
OMA:LYDHTDE OrthoDB:EOG4868CD GeneTree:ENSGT00700000104487
EMBL:BC091381 IPI:IPI00365055 RefSeq:NP_001013179.1 UniGene:Rn.8860
ProteinModelPortal:Q5BJQ6 SMR:Q5BJQ6 STRING:Q5BJQ6 PRIDE:Q5BJQ6
Ensembl:ENSRNOT00000055101 GeneID:311670 KEGG:rno:311670
InParanoid:Q5BJQ6 NextBio:664016 Genevestigator:Q5BJQ6
GermOnline:ENSRNOG00000004775 Uniprot:Q5BJQ6
Length = 431
Score = 153 (58.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 57/218 (26%), Positives = 99/218 (45%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN 573
L +GS + +LKL+D P + R Y E + L S+ + + L
Sbjct: 188 LASGSRDYTLKLFDYSK-PSAKRAFKY------IQEAEMLRSISFHPSGDFILVGTQHPT 240
Query: 574 IALYDINSGRRLQVFADMHKEHINVVKFSNHSPS--IFATSSFDQDVKLWD-LRQKPIQP 630
+ LYDIN+ + V + +H + + N++PS ++ T S D +KLWD + + I
Sbjct: 241 LRLYDINTFQCF-VSCNPQDQHTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSNRCITT 299
Query: 631 CYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVD-GRVHLNF-GITATGSSQNYTR 688
A FS + Y+L S D+ V +L + GR + + G +G + T+
Sbjct: 300 FEKAHDGAEVCSAIFSKNSKYILSSGKDS-VAKLWEISTGRTLVRYTGAGLSGRQVHRTQ 358
Query: 689 SYYLNGRDYIVSGSCDEHVVRICC--AQTGRRLRDISL 724
+ + + DYI+ DE + +CC ++T R +SL
Sbjct: 359 AVFNHTEDYILLP--DERTISLCCWDSRTAERRNLLSL 394
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 149 (57.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 55/227 (24%), Positives = 111/227 (48%)
Query: 495 FGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLT 554
+G + + W S+L++ SD+ +LK++D+R ++ + + V +F
Sbjct: 78 YGHSLEISDVAWSSD-SSRLVSASDDKTLKVWDMRS-GKCLKTLKGHSDFVFCCDF---- 131
Query: 555 SVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSF 614
N L ++ + +++ ++++ +G+ L+ + H + I+ V F N + S+ + S+
Sbjct: 132 ----NPPSNLIVSGSFDESVKIWEVKTGKCLKTLS-AHSDPISAVNF-NCNGSLIVSGSY 185
Query: 615 DQDVKLWDLRQKPIQPCYTASSSKGNVMVCF---SPDDHYLLVSAVDNEVRQLLAVDGRV 671
D ++WD C + +GN V F SP+ Y+L + +DN ++ GR
Sbjct: 186 DGLCRIWDAASGQ---CLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRC 242
Query: 672 HLNFGITATG-SSQNYT--RSYYLNGRDYIVSGSCDEHVVRICCAQT 715
L T TG ++ Y S+ + GR ++VSGS ++++V I QT
Sbjct: 243 -LK---TYTGHKNEKYCLFASFSVTGRKWVVSGS-EDNMVYIWNLQT 284
>UNIPROTKB|E2R0N2 [details] [associations]
symbol:DDB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009411 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0004842
GO:GO:0000209 GO:GO:0051865 KO:K10140 CTD:1643
GeneTree:ENSGT00510000047881 OMA:NSAYFNP GO:GO:0006290
EMBL:AAEX03011491 RefSeq:XP_540746.3 ProteinModelPortal:E2R0N2
Ensembl:ENSCAFT00000014057 GeneID:483626 KEGG:cfa:483626
NextBio:20857995 Uniprot:E2R0N2
Length = 427
Score = 151 (58.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 64/252 (25%), Positives = 106/252 (42%)
Query: 422 RSLCAAKVGSSAWPCLHT-LTVSGNHMGDENRSF--------RPRQFEYHPSISCLMVFG 472
R+L K+G +AWP L L S H R F R +HP+ + G
Sbjct: 71 RALHHHKLGKAAWPSLQQGLQQSFLHSLASYRIFQKAAPFDRRATSLAWHPTHPSTLAVG 130
Query: 473 TLDGXXXXXXXXXXXXXSYIPSFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMP 532
+ G ++I GA S+ GL + ++ S G+ +L D +
Sbjct: 131 SKGGDIMLWNFGMKDKPTFIKGIGAGGSITGLKFNPLDTNQFFTSSMEGTTRLQDFKGN- 189
Query: 533 PSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMH 592
++R + +GT F S+ V++ + + ++ L +++ GR L MH
Sbjct: 190 -TLR-VFTSSGTCNF----WFCSLDVSARSRMVVTGDNVGHVILLNMD-GRELWNLR-MH 241
Query: 593 KEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM--VCFSPDDH 650
K+ + V + AT+S DQ VK+WDLRQ + + S + + CFSPD
Sbjct: 242 KKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKSSFLHSLPHSHPVNAACFSPDGA 301
Query: 651 YLLVSAVDNEVR 662
LL + +E+R
Sbjct: 302 QLLTTDQKSELR 313
>UNIPROTKB|Q05048 [details] [associations]
symbol:CSTF1 "Cleavage stimulation factor subunit 1"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0003723 "RNA binding" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0006378 "mRNA polyadenylation"
evidence=TAS] [GO:0006379 "mRNA cleavage" evidence=TAS] [GO:0006396
"RNA processing" evidence=TAS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006397 "mRNA processing"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CH471077 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 Reactome:REACT_1675 GO:GO:0006378
GO:GO:0003723 GO:GO:0000398 Pathway_Interaction_DB:bard1pathway
EMBL:AL121914 Reactome:REACT_1788 GO:GO:0006379 GO:GO:0006369
Reactome:REACT_78 EMBL:L02547 EMBL:BT007138 EMBL:AK312774
EMBL:BC001011 EMBL:BC007425 IPI:IPI00011528 PIR:A45142
RefSeq:NP_001028693.1 RefSeq:NP_001028694.1 RefSeq:NP_001315.1
UniGene:Hs.172865 ProteinModelPortal:Q05048 SMR:Q05048
IntAct:Q05048 STRING:Q05048 PhosphoSite:Q05048 DMDM:461848
REPRODUCTION-2DPAGE:IPI00011528 PaxDb:Q05048 PeptideAtlas:Q05048
PRIDE:Q05048 DNASU:1477 Ensembl:ENST00000217109
Ensembl:ENST00000415828 Ensembl:ENST00000452950 GeneID:1477
KEGG:hsa:1477 UCSC:uc002xxl.1 CTD:1477 GeneCards:GC20P054967
H-InvDB:HIX0015931 HGNC:HGNC:2483 HPA:CAB019270 MIM:600369
neXtProt:NX_Q05048 PharmGKB:PA26985 HOGENOM:HOG000234077
HOVERGEN:HBG051144 InParanoid:Q05048 KO:K14406 OMA:LYDHTDE
OrthoDB:EOG4868CD PhylomeDB:Q05048 GenomeRNAi:1477 NextBio:6065
ArrayExpress:Q05048 Bgee:Q05048 CleanEx:HS_CSTF1
Genevestigator:Q05048 GermOnline:ENSG00000101138 Uniprot:Q05048
Length = 431
Score = 150 (57.9 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 59/221 (26%), Positives = 98/221 (44%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN 573
L +GS + +LKL+D P + R Y E + L S+ + + L
Sbjct: 188 LASGSRDYTLKLFDYSK-PSAKRAFKY------IQEAEMLRSISFHPSGDFILVGTQHPT 240
Query: 574 IALYDINSGRRLQVFA-----DMHKEHINVVKFSNHSPSIFATSSFDQDVKLWD-LRQKP 627
+ LYDIN+ Q F D H + I V + N S +++ T S D +KLWD + +
Sbjct: 241 LRLYDINT---FQCFVSCNPQDQHTDAICSVNY-NSSANMYVTGSKDGCIKLWDGVSNRC 296
Query: 628 IQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVD-GRVHLNF-GITATGSSQN 685
I A FS + Y+L S D+ V +L + GR + + G +G +
Sbjct: 297 ITTFEKAHDGAEVCSAIFSKNSKYILSSGKDS-VAKLWEISTGRTLVRYTGAGLSGRQVH 355
Query: 686 YTRSYYLNGRDYIVSGSCDEHVVRICC--AQTGRRLRDISL 724
T++ + + DY++ DE + +CC ++T R +SL
Sbjct: 356 RTQAVFNHTEDYVLLP--DERTISLCCWDSRTAERRNLLSL 394
>UNIPROTKB|Q92466 [details] [associations]
symbol:DDB2 "DNA damage-binding protein 2" species:9606
"Homo sapiens" [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0009411 "response to UV" evidence=IDA] [GO:0043234 "protein
complex" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0051865
"protein autoubiquitination" evidence=IDA] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0003684 "damaged DNA binding"
evidence=TAS] [GO:0000718 "nucleotide-excision repair, DNA damage
removal" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006289
"nucleotide-excision repair" evidence=TAS] Reactome:REACT_216
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0009411 GO:GO:0043234 GO:GO:0005654
EMBL:CH471064 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003684 eggNOG:COG2319 GO:GO:0000209
GO:GO:0051865 GO:GO:0000718 PDB:3EI4 PDB:3I7L PDB:4E54 PDB:4E5Z
PDBsum:3EI4 PDBsum:3I7L PDBsum:4E54 PDBsum:4E5Z KO:K10140 CTD:1643
HOGENOM:HOG000231440 HOVERGEN:HBG000713 OMA:NSAYFNP
OrthoDB:EOG40K7ZV GO:GO:0006290 EMBL:U18300 EMBL:AB107037
EMBL:AB107038 EMBL:AB107039 EMBL:AB107040 EMBL:BT007139
EMBL:AY220533 EMBL:AK313262 EMBL:BC000093 IPI:IPI00021518
IPI:IPI00446284 IPI:IPI00549348 IPI:IPI00607674 IPI:IPI00607727
PIR:I38909 RefSeq:NP_000098.1 UniGene:Hs.700338
ProteinModelPortal:Q92466 SMR:Q92466 DIP:DIP-36670N IntAct:Q92466
STRING:Q92466 PhosphoSite:Q92466 DMDM:12230033 PaxDb:Q92466
PRIDE:Q92466 DNASU:1643 Ensembl:ENST00000256996
Ensembl:ENST00000378600 Ensembl:ENST00000378601
Ensembl:ENST00000378603 GeneID:1643 KEGG:hsa:1643 UCSC:uc001neb.2
UCSC:uc001nee.2 UCSC:uc009yli.1 GeneCards:GC11P047193
HGNC:HGNC:2718 HPA:CAB025912 MIM:278740 MIM:600811
neXtProt:NX_Q92466 Orphanet:276261 PharmGKB:PA27188
InParanoid:Q92466 PhylomeDB:Q92466 ChiTaRS:DDB2
EvolutionaryTrace:Q92466 GenomeRNAi:1643 NextBio:6758 Bgee:Q92466
CleanEx:HS_DDB2 Genevestigator:Q92466 GermOnline:ENSG00000134574
Uniprot:Q92466
Length = 427
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 61/252 (24%), Positives = 105/252 (41%)
Query: 422 RSLCAAKVGSSAWPCLHT-LTVSGNHMGDENRSF--------RPRQFEYHPSISCLMVFG 472
R+L K+G ++WP + L S H D R R +HP+ + G
Sbjct: 71 RTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVG 130
Query: 473 TLDGXXXXXXXXXXXXXSYIPSFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMP 532
+ G ++I GA S+ GL + ++ A S G+ +L D +
Sbjct: 131 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG-- 188
Query: 533 PSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMH 592
+I + + T+ S+ V++ + + N+ L +++ G+ L MH
Sbjct: 189 -NILRVFASSDTINI----WFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLR-MH 241
Query: 593 KEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM--VCFSPDDH 650
K+ + V + AT+S DQ VK+WDLRQ + + S + + CFSPD
Sbjct: 242 KKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA 301
Query: 651 YLLVSAVDNEVR 662
LL + +E+R
Sbjct: 302 RLLTTDQKSEIR 313
>WB|WBGene00009341 [details] [associations]
symbol:thoc-3 species:6239 "Caenorhabditis elegans"
[GO:0000347 "THO complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 KO:K12880 EMBL:Z81523 GeneTree:ENSGT00700000104559
OMA:LAYACDD RefSeq:NP_492416.2 UniGene:Cel.18802
ProteinModelPortal:P91867 SMR:P91867 STRING:P91867 PaxDb:P91867
EnsemblMetazoa:F32H2.4 GeneID:172713 KEGG:cel:CELE_F32H2.4
UCSC:F32H2.4 CTD:172713 WormBase:F32H2.4 HOGENOM:HOG000115395
InParanoid:P91867 NextBio:876703 Uniprot:P91867
Length = 331
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 29/111 (26%), Positives = 55/111 (49%)
Query: 552 QLTSVHVNSMDELFLASGYSKNIALYDINSGR-RLQVFADMHKEHINVVKFSNHSPSIFA 610
Q S+ N + + K +++ +++ GR R H + V S P++FA
Sbjct: 38 QCQSIAFNCDGTKLVCGAFDKKVSVANVDGGRLRFSWVGSSHSSSVEQVACSEKQPNLFA 97
Query: 611 TSSFDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEV 661
++S D+++ +WD+RQ +P + S+ GN + +SP D Y + DN +
Sbjct: 98 SASADRNICVWDIRQS--KPTHRISNRVGNFFISWSPCDEYFIFLDKDNRI 146
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 51/226 (22%), Positives = 107/226 (47%)
Query: 496 GAMNSVLGLCWLKKYPSKLI-AGSDNGSLKLYDIRH--MPPSIRGMHYGAGTVTFDEFDQ 552
G + + W + SKLI + SD+ ++K++D+ M +++G H E+
Sbjct: 86 GHKEGISDIAWSQD--SKLICSASDDKTIKIWDVESGKMVKTLKG-H--------KEY-- 132
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
+ V N L ++ + +N+ ++D+N+G ++ + H + + V F N ++ +
Sbjct: 133 VFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMIS-AHSDPVTGVHF-NRDGTLVVSG 190
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVH 672
S+D V++WD + + K V FSP+ ++L +DN +R + +
Sbjct: 191 SYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKC 250
Query: 673 LNFGITATG-SSQNYT--RSYYLNGRDYIVSGSCDEHVVRICCAQT 715
L T TG ++ Y ++ + +IV+GS +++++ I QT
Sbjct: 251 LK---TYTGHKNEKYCIFSTFSVTCGKWIVTGS-EDNLIYIYNLQT 292
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 46/170 (27%), Positives = 76/170 (44%)
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
LT+V +N F+ Y + L+D SG L + H+ + + F+N AT
Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTL-EGHRNVVYAIAFNNPYGDKIATG 153
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVRQLLAVDGR 670
SFD+ KLW + CY +VC F+P + ++D + L +
Sbjct: 154 SFDKTCKLWSVETGK---CYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAK-LWDIQNG 209
Query: 671 VHLNFGITATG-SSQNYTRSYYLNGRDYIVSGSCDEHVVRICCAQTGRRL 719
+ T G S++ + S+ +G D I++GS D H V + A TGR++
Sbjct: 210 EEV---YTLRGHSAEIISLSFNTSG-DRIITGSFD-HTVVVWDADTGRKV 254
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 45/173 (26%), Positives = 77/173 (44%)
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
LT+V +N F+ Y + ++D SG L + H+ + + F+N AT
Sbjct: 95 LTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTL-EGHRNVVYAIAFNNPYGDKIATG 153
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVRQLLAVDGR 670
SFD+ KLW CY +VC F+P + ++D + L +
Sbjct: 154 SFDKTCKLWSAETGK---CYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAK-LWDIQSG 209
Query: 671 VHLNFGITATGS-SQNYTRSYYLNGRDYIVSGSCDEHVVRICCAQTGRRLRDI 722
+ +T TG ++ + S+ +G D I++GS D H V + A TGR++ +
Sbjct: 210 EEV---VTLTGHLAEIISLSFDTSG-DRIITGSFD-HTVVVWDASTGRKVHTL 257
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 141 (54.7 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 45/158 (28%), Positives = 77/158 (48%)
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
+ S+ +++ +EL +A S +I ++D+ + + L+ HK +I + F + S A+
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLG-HKANICSLDFHPYG-SFVASG 123
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVRQLLAVDGR 670
S D D+KLWD+R+K C S + C FSPD +L +A D+ V+ G+
Sbjct: 124 SLDTDIKLWDVRRKG---CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 671 VHLNF-GITATGSSQNYTRSYYLNGRDYIVSGSCDEHV 707
V F G + + + S YL + SGS D +
Sbjct: 181 VMFEFTGHSGPVNVVEFHPSEYL-----LASGSSDRTI 213
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 144 (55.7 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 46/170 (27%), Positives = 77/170 (45%)
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
LT+V +N F+ Y + L+D SG L + H+ + + F+N AT
Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTL-EGHRNVVYAIAFNNPYGDKIATG 153
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVRQLLAVDGR 670
SFD+ KLW + CY +VC F+P + ++D + L +
Sbjct: 154 SFDKTCKLWSVETGK---CYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAK-LWDIQSG 209
Query: 671 VHLNFGITATG-SSQNYTRSYYLNGRDYIVSGSCDEHVVRICCAQTGRRL 719
+ T TG S++ + S+ +G + I++GS D H V + A TGR++
Sbjct: 210 EEV---FTLTGHSAEIISLSFNTSG-NRIITGSFD-HTVTVWEADTGRKV 254
Score = 37 (18.1 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 147 KRIHTLNLDYSTSLTSFKEDCFSCMPNLICLS 178
K I L+LD ST +++ E+ P LI S
Sbjct: 28 KSIDLLDLDPSTDVSALVEEIQKAEP-LITAS 58
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/112 (27%), Positives = 59/112 (52%)
Query: 552 QLTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFAT 611
++ VHV S + F + G + + +D+++GR ++ F H +N VKF N S S+ +
Sbjct: 62 EVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRG-HDGEVNAVKF-NDSSSVVVS 119
Query: 612 SSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSAVDNEVR 662
+ FD+ +++WD R ++P + VM V + + ++ +VD VR
Sbjct: 120 AGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTE--IIGGSVDGTVR 169
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 54/200 (27%), Positives = 94/200 (47%)
Query: 507 LKKYPSKLIA-GSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELF 565
L K +L+A G D+ + L+ I + P I + G + + SV +N+ +EL
Sbjct: 28 LGKASGRLLATGGDDCRVNLWSI-NKPNCIMSL---TGHTS-----PVESVRLNTPEELI 78
Query: 566 LASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQ 625
+A S +I ++D+ + + L+ HK +I + F + + A+ S D ++KLWD+R+
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMG-HKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR 136
Query: 626 KPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNF-GITATGSSQ 684
K Y S + FSPD +L +A D+ V+ G++ F G T +
Sbjct: 137 KGCVFRYRGHSQAVRCLR-FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 685 NYTRSYYLNGRDYIVSGSCD 704
+ + YL + SGS D
Sbjct: 196 EFHPNEYL-----LASGSSD 210
>UNIPROTKB|B0W517 [details] [associations]
symbol:CPIJ001500 "Ribosome biogenesis protein WDR12
homolog" species:7176 "Culex quinquefasciatus" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
HAMAP:MF_03029 EMBL:DS231840 RefSeq:XP_001843801.1
UniGene:Cpi.10498 ProteinModelPortal:B0W517 STRING:B0W517
GeneID:6033337 KEGG:cqu:CpipJ_CPIJ001500 VectorBase:CPIJ001500
Uniprot:B0W517
Length = 425
Score = 127 (49.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 40/170 (23%), Positives = 80/170 (47%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYG-AGTVTFDEFDQLT 554
G + G+ W+ + L+ S + ++K++D+ ++ G+ +G +F FD
Sbjct: 258 GHRECISGVQWIDD--NTLVTSSWDHTIKIWDL-----ALNGIKSEISGNKSF--FD--- 305
Query: 555 SVHVNSMDELFLASGYSKNIALYD--INSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
+ + ++ L + + KN+ LYD N G ++ H + + V++S + +F +
Sbjct: 306 -LSYSKLNGLIITASPDKNLRLYDPKSNQGTLVKNTYLGHTQWVQSVRWSTTNEYLFVSG 364
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
++D VKLWD R P P + + V+ C + ++L DN VR
Sbjct: 365 AYDNHVKLWDYRS-PKAPIFELIGHEDKVLACDWSNPRFILSGGSDNSVR 413
Score = 53 (23.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 177 LSMCETRVGNLWTTIAALS-KLPS-LAELRFQNWLCCDDTGNSSGSSDQDDKTDFSQLNI 234
L+ C NLWTT +P +A ++ W+ D+ S+ QD + N+
Sbjct: 122 LTGCYDNTLNLWTTKGKHKLTIPGHIAPVKGVTWISLDEEKGVFASASQDQTVMLWEWNV 181
Query: 235 CSS 237
++
Sbjct: 182 AAN 184
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 43/161 (26%), Positives = 74/161 (45%)
Query: 560 SMDELFLASGYS-KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDV 618
S D L SG K + L+D+ +G+ ++ F H +N V+F N ++ + S D V
Sbjct: 76 SFDNSHLCSGGGDKTVVLWDVATGQVVRKFRG-HAGKVNTVQF-NEEATVILSGSIDSSV 133
Query: 619 KLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGIT 678
+ WD R + +P T ++ + DH +L +VD VR+ G+V ++
Sbjct: 134 RCWDCRSRKPEPVQTLDEARDGIS-SVKVSDHEILAGSVDGRVRRYDLRMGQVSSDY--- 189
Query: 679 ATGSSQNYTRSYYLNGRDYIVSGSCDEHVVRICCAQTGRRL 719
GS T + +G+ ++S S D +R+ TG L
Sbjct: 190 -VGSPITCT-CFSRDGQCTLIS-SLDS-TLRLLDKDTGELL 226
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 136 (52.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 37/125 (29%), Positives = 64/125 (51%)
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
+ S+ +++ +EL +A S +I ++D+ + + L+ HK +I + F + S A+
Sbjct: 65 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLG-HKANICSLDFHPYG-SFVASG 122
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVRQLLAVDGR 670
S D D+KLWD+R+K C S + C FSPD +L +A D+ V+ G+
Sbjct: 123 SLDTDIKLWDVRRKG---CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 179
Query: 671 VHLNF 675
V F
Sbjct: 180 VMFEF 184
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 136 (52.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 37/125 (29%), Positives = 64/125 (51%)
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
+ S+ +++ +EL +A S +I ++D+ + + L+ HK +I + F + S A+
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLG-HKANICSLDFHPYG-SFVASG 123
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVRQLLAVDGR 670
S D D+KLWD+R+K C S + C FSPD +L +A D+ V+ G+
Sbjct: 124 SLDTDIKLWDVRRKG---CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 671 VHLNF 675
V F
Sbjct: 181 VMFEF 185
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 136 (52.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 37/125 (29%), Positives = 64/125 (51%)
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
+ S+ +++ +EL +A S +I ++D+ + + L+ HK +I + F + S A+
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLG-HKANICSLDFHPYG-SFVASG 123
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVRQLLAVDGR 670
S D D+KLWD+R+K C S + C FSPD +L +A D+ V+ G+
Sbjct: 124 SLDTDIKLWDVRRKG---CIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 671 VHLNF 675
V F
Sbjct: 181 VMFEF 185
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 132 (51.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 46/197 (23%), Positives = 92/197 (46%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN 573
L++GSD+ +LK++++ S++ + G F + N L ++ + ++
Sbjct: 129 LVSGSDDKTLKVWELS-TGKSLKTLK-GHSNYVF-------CCNFNPQSNLIVSGSFDES 179
Query: 574 IALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYT 633
+ ++D+ +G+ L+ H + ++ V F N S+ +SS+D ++WD
Sbjct: 180 VRIWDVRTGKCLKTLP-AHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 237
Query: 634 ASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATG-SSQNYT--RSY 690
+ V FSP+ Y+L + +DN ++ G+ L T TG ++ Y ++
Sbjct: 238 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-LK---TYTGHKNEKYCIFANF 293
Query: 691 YLNGRDYIVSGSCDEHV 707
+ G +IVSGS D V
Sbjct: 294 SVTGGKWIVSGSEDNMV 310
>UNIPROTKB|Q17BB0 [details] [associations]
symbol:AAEL005041 "Ribosome biogenesis protein WDR12
homolog" species:7159 "Aedes aegypti" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 EMBL:CH477324 RefSeq:XP_001650205.1
ProteinModelPortal:Q17BB0 STRING:Q17BB0
EnsemblMetazoa:AAEL005041-RA GeneID:5565845
KEGG:aag:AaeL_AAEL005041 VectorBase:AAEL005041 HOGENOM:HOG000264464
OMA:LQTRFFT OrthoDB:EOG4BNZTB PhylomeDB:Q17BB0 HAMAP:MF_03029
Uniprot:Q17BB0
Length = 427
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 44/170 (25%), Positives = 81/170 (47%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYG-AGTVTFDEFDQLT 554
G + G+ W+ + L+ S + ++K++D+ ++ G+ G +F FD L+
Sbjct: 260 GHRECISGVQWIDD--NTLVTSSWDHTIKIWDL-----ALSGIKSEICGHKSF--FD-LS 309
Query: 555 SVHVNSMDELFLASGYSKNIALYD--INSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
H+N L +A+ KN+ LYD N G ++ H + + V++S + +F +
Sbjct: 310 YSHLNG---LIIAASPDKNLRLYDPKSNQGTIVKNTYLGHTQWVQSVRWSTTNEYLFVSG 366
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
++D VKLWD R P P + + V+ C + ++L DN VR
Sbjct: 367 AYDNHVKLWDYRS-PKAPIFELIGHEDKVLACDWSNPKFILSGGSDNSVR 415
>ZFIN|ZDB-GENE-030131-2958 [details] [associations]
symbol:cstf1 "cleavage stimulation factor, 3'
pre-RNA, subunit 1" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-2958 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
HOGENOM:HOG000234077 HOVERGEN:HBG051144 EMBL:BC066520
IPI:IPI00481543 UniGene:Dr.78498 ProteinModelPortal:Q6NYN6
STRING:Q6NYN6 PRIDE:Q6NYN6 InParanoid:Q6NYN6 ArrayExpress:Q6NYN6
Bgee:Q6NYN6 Uniprot:Q6NYN6
Length = 431
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 60/233 (25%), Positives = 102/233 (43%)
Query: 507 LKKYPSK--LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDEL 564
L +P++ L +GS + +LKL+D P + R + E + L S+ + +
Sbjct: 179 LSFHPTEQILASGSRDYTLKLFDYSK-PSAKRAFKH------VQEAEMLRSISFHPSGDF 231
Query: 565 FLASGYSKNIALYDINSGRRLQVFA-----DMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
L + LYD+N+ Q F D H + I V + N S + + T S D +K
Sbjct: 232 LLVGTQHPTLRLYDVNT---FQCFVSCNPLDQHTDTICGVCY-NPSANSYVTCSKDGSIK 287
Query: 620 LWDLRQKPIQPCYTA-SSSKGNVMVC---FSPDDHYLLVSAVDNEVRQLLAVD-GRVHLN 674
LWD C T + VC FS + Y+L + D+ V +L + GR +
Sbjct: 288 LWD---GVSNRCVTTFDKAHEGAEVCSAVFSKNSKYILSTGKDS-VAKLWEISTGRTLVK 343
Query: 675 F-GITATGSSQNYTRSYYLNGRDYIVSGSCDEHVVRICC--AQTGRRLRDISL 724
+ G +G + T+ + + DY++ DE + +CC ++T R +SL
Sbjct: 344 YTGAGLSGRQTHRTQGVFNHTEDYVLLP--DERTISLCCWDSRTAERKNLLSL 394
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 47/205 (22%), Positives = 96/205 (46%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN 573
L++ SD+ +LK++D+ ++ + G F + N L ++ + ++
Sbjct: 76 LVSASDDKTLKIWDVSS-GKCLKTLK-GHSNYVF-------CCNFNPQSNLIVSGSFDES 126
Query: 574 IALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYT 633
+ ++D+ +G+ L+ H + ++ V F N S+ +SS+D ++WD
Sbjct: 127 VRIWDVKTGKCLKTLP-AHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 184
Query: 634 ASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATG-SSQNYT--RSY 690
+ V FSP+ Y+L + +DN ++ G+ L T TG ++ Y ++
Sbjct: 185 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-LK---TYTGHKNEKYCIFANF 240
Query: 691 YLNGRDYIVSGSCDEHVVRICCAQT 715
+ G +IVSGS ++++V I QT
Sbjct: 241 SVTGGKWIVSGS-EDNLVYIWNLQT 264
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 130 (50.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 43/161 (26%), Positives = 74/161 (45%)
Query: 560 SMDELFLASGYS-KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDV 618
S D L SG K + L+D+ +G+ ++ F H +N V+F N ++ + S D V
Sbjct: 76 SFDNSHLCSGGGDKTVVLWDVATGQVVRKFRG-HAGKVNTVQF-NEEATVILSGSIDSSV 133
Query: 619 KLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGIT 678
+ WD R + +P T ++ + DH +L +VD VR+ G+V ++
Sbjct: 134 RCWDCRSRKPEPVQTLDEARDGIS-SVKVSDHEILAGSVDGRVRRYDLRMGQVTSDY--- 189
Query: 679 ATGSSQNYTRSYYLNGRDYIVSGSCDEHVVRICCAQTGRRL 719
GS T + +G+ ++S S D +R+ TG L
Sbjct: 190 -VGSPITCT-CFSRDGQCTLIS-SLDS-TLRLLDKDTGELL 226
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 47/205 (22%), Positives = 96/205 (46%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN 573
L++ SD+ +LK++D+ ++ + G F + N L ++ + ++
Sbjct: 102 LVSASDDKTLKIWDVSS-GKCLKTLK-GHSNYVF-------CCNFNPQSNLIVSGSFDES 152
Query: 574 IALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYT 633
+ ++D+ +G+ L+ H + ++ V F N S+ +SS+D ++WD
Sbjct: 153 VRIWDVKTGKCLKTLP-AHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 634 ASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATG-SSQNYT--RSY 690
+ V FSP+ Y+L + +DN ++ G+ L T TG ++ Y ++
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-LK---TYTGHKNEKYCIFANF 266
Query: 691 YLNGRDYIVSGSCDEHVVRICCAQT 715
+ G +IVSGS ++++V I QT
Sbjct: 267 SVTGGKWIVSGS-EDNLVYIWNLQT 290
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 47/205 (22%), Positives = 96/205 (46%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN 573
L++ SD+ +LK++D+ ++ + G F + N L ++ + ++
Sbjct: 102 LVSASDDKTLKIWDVSS-GKCLKTLK-GHSNYVF-------CCNFNPQSNLIVSGSFDES 152
Query: 574 IALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYT 633
+ ++D+ +G+ L+ H + ++ V F N S+ +SS+D ++WD
Sbjct: 153 VRIWDVKTGKCLKTLP-AHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 634 ASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATG-SSQNYT--RSY 690
+ V FSP+ Y+L + +DN ++ G+ L T TG ++ Y ++
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-LK---TYTGHKNEKYCIFANF 266
Query: 691 YLNGRDYIVSGSCDEHVVRICCAQT 715
+ G +IVSGS ++++V I QT
Sbjct: 267 SVTGGKWIVSGS-EDNLVYIWNLQT 290
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 47/205 (22%), Positives = 96/205 (46%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN 573
L++ SD+ +LK++D+ ++ + G F + N L ++ + ++
Sbjct: 102 LVSASDDKTLKIWDVSS-GKCLKTLK-GHSNYVF-------CCNFNPQSNLIVSGSFDES 152
Query: 574 IALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYT 633
+ ++D+ +G+ L+ H + ++ V F N S+ +SS+D ++WD
Sbjct: 153 VRIWDVKTGKCLKTLP-AHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 634 ASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATG-SSQNYT--RSY 690
+ V FSP+ Y+L + +DN ++ G+ L T TG ++ Y ++
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-LK---TYTGHKNEKYCIFANF 266
Query: 691 YLNGRDYIVSGSCDEHVVRICCAQT 715
+ G +IVSGS ++++V I QT
Sbjct: 267 SVTGGKWIVSGS-EDNLVYIWNLQT 290
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 47/205 (22%), Positives = 96/205 (46%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN 573
L++ SD+ +LK++D+ ++ + G F + N L ++ + ++
Sbjct: 102 LVSASDDKTLKIWDVSS-GKCLKTLK-GHSNYVF-------CCNFNPQSNLIVSGSFDES 152
Query: 574 IALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYT 633
+ ++D+ +G+ L+ H + ++ V F N S+ +SS+D ++WD
Sbjct: 153 VRIWDVKTGKCLKTLP-AHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 634 ASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATG-SSQNYT--RSY 690
+ V FSP+ Y+L + +DN ++ G+ L T TG ++ Y ++
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-LK---TYTGHKNEKYCIFANF 266
Query: 691 YLNGRDYIVSGSCDEHVVRICCAQT 715
+ G +IVSGS ++++V I QT
Sbjct: 267 SVTGGKWIVSGS-EDNLVYIWNLQT 290
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 47/205 (22%), Positives = 96/205 (46%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN 573
L++ SD+ +LK++D+ ++ + G F + N L ++ + ++
Sbjct: 102 LVSASDDKTLKIWDVSS-GKCLKTLK-GHSNYVF-------CCNFNPQSNLIVSGSFDES 152
Query: 574 IALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYT 633
+ ++D+ +G+ L+ H + ++ V F N S+ +SS+D ++WD
Sbjct: 153 VRIWDVKTGKCLKTLP-AHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 634 ASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATG-SSQNYT--RSY 690
+ V FSP+ Y+L + +DN ++ G+ L T TG ++ Y ++
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC-LK---TYTGHKNEKYCIFANF 266
Query: 691 YLNGRDYIVSGSCDEHVVRICCAQT 715
+ G +IVSGS ++++V I QT
Sbjct: 267 SVTGGKWIVSGS-EDNLVYIWNLQT 290
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 124 (48.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 50/188 (26%), Positives = 89/188 (47%)
Query: 507 LKKYPSKLIA-GSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELF 565
L K +L+A G D+ + L+ I + P I + G + + SV +N+ +EL
Sbjct: 32 LGKASGRLLATGGDDCRVNLWSI-NKPNCIMSL---TGHTS-----PVESVRLNTPEELI 82
Query: 566 LASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQ 625
+A S +I ++D+ + + L+ HK +I + F + + A+ S D ++KLWD+R+
Sbjct: 83 VAGSQSGSIRVWDLEAAKILRTLMG-HKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR 140
Query: 626 KPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNF-GITATGSSQ 684
K Y S + FSPD +L +A D+ V+ G++ F G T +
Sbjct: 141 KGCVFRYRGHSQAVRCLR-FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 199
Query: 685 NYTRSYYL 692
+ + YL
Sbjct: 200 EFHPNEYL 207
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 49/177 (27%), Positives = 82/177 (46%)
Query: 494 SFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPS--IRGMHYGAGTVTFDEFD 551
S+ ++V +CW + + S LIA +GS+K+YD PPS IR A V
Sbjct: 56 SYDTADAVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQ----- 110
Query: 552 QLTSVHVN-SMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPS--- 607
SV N + + FL S + + L+ ++ ++ F KEH V + +P
Sbjct: 111 ---SVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTF----KEHAYCVYQAVWNPKHGD 163
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVMVCF--SPDDHYLLVSAVDNEVR 662
+FA++S D +++WD+R+ A + ++ C DD L S+VD V+
Sbjct: 164 VFASASGDCTLRIWDVREPGSTMIIPAHDFE--ILSCDWNKYDDCILATSSVDKTVK 218
>POMBASE|SPBC1A4.07c [details] [associations]
symbol:SPBC1A4.07c "U3 snoRNP-associated protein Sof1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1A4.07c GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006364 GO:GO:0032040
HOGENOM:HOG000210082 KO:K11806 OMA:CASDRSI InterPro:IPR007287
Pfam:PF04158 PIR:T39855 RefSeq:NP_595809.1
ProteinModelPortal:O74340 STRING:O74340 EnsemblFungi:SPBC1A4.07c.1
GeneID:2540796 KEGG:spo:SPBC1A4.07c OrthoDB:EOG4GXJWG
NextBio:20801914 Uniprot:O74340
Length = 436
Score = 131 (51.2 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 504 LCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDE 563
+ W +AGS++ +L +YD+R++ R +H V D + SV + +
Sbjct: 235 ISWNPMEAFNFVAGSEDHNLYMYDMRNLK---RALH-----VYKDHVSAVMSVDFSPTGQ 286
Query: 564 LFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDL 623
F++ Y K I +Y++ G V+ + + VKFS + IF+ S D +V+LW
Sbjct: 287 EFVSGSYDKTIRIYNVREGHSRDVYHTKRMQRVTAVKFSMDAQYIFSGSD-DSNVRLWRA 345
Query: 624 R 624
R
Sbjct: 346 R 346
>DICTYBASE|DDB_G0284101 [details] [associations]
symbol:snrpA1 "U2 small nuclear ribonucleoprotein A'"
species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001611 PROSITE:PS51450
dictyBase:DDB_G0284101 GenomeReviews:CM000153_GR eggNOG:COG4886
EMBL:AAFI02000063 InterPro:IPR003603 SMART:SM00446 KO:K11092
OMA:KPTHILD RefSeq:XP_638751.1 ProteinModelPortal:Q54Q46 SMR:Q54Q46
STRING:Q54Q46 EnsemblProtists:DDB0233176 GeneID:8624421
KEGG:ddi:DDB_G0284101 InParanoid:Q54Q46 ProtClustDB:CLSZ2728949
Uniprot:Q54Q46
Length = 244
Score = 86 (35.3 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 32/121 (26%), Positives = 55/121 (45%)
Query: 86 LTGEFALSLMHAIDQ-KLRVVDLHDSSFGKDFIRNLSQRGLMCEVLNLRSSRFRKLNMIG 144
LT E L I+ K R ++L + I NL + ++ + K+
Sbjct: 3 LTAELILKSPDYINPCKDRELNLRGNKISS--IENLGATKNQFDTIDFSDNEISKVENFP 60
Query: 145 EFKRIHTLNLDYSTSLTSFKEDCFSCMPNLICLSMCETRVGNLWTTIAALSKLPSLAELR 204
+ +R+ TL L + + SF+ED S +P+L L + R+ NL + L L L+E++
Sbjct: 61 KLERVKTL-LFNNNHIKSFEEDFGSSLPHLRALILSNNRINNL----SDLEPLTKLSEIK 115
Query: 205 F 205
F
Sbjct: 116 F 116
Score = 85 (35.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 322 LKYISCHASPICFEKHYRDYMIASLPKLKFLDNLPIRKVDRERATITYSQ 371
+K+IS +P+ + +YR Y+I +P LK +D ++K++RE + + Q
Sbjct: 114 IKFISLLENPVSKKPNYRLYLIHLVPHLKIIDFRKVKKIEREESKKLFGQ 163
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 128 (50.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 31/105 (29%), Positives = 51/105 (48%)
Query: 560 SMDELFLASGYS-KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDV 618
S D L SG K + L+D+ SG+ ++ F H +N V+F N ++ + S D V
Sbjct: 76 SFDNSSLCSGGGDKAVVLWDVASGQVVRKFRG-HAGKVNTVQF-NEEATVILSGSIDSSV 133
Query: 619 KLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQ 663
+ WD R + +P T ++ + DH +L +VD VR+
Sbjct: 134 RCWDCRSRKPEPVQTLDEARDGIS-SVKVSDHEVLAGSVDGRVRR 177
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 128 (50.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 31/105 (29%), Positives = 51/105 (48%)
Query: 560 SMDELFLASGYS-KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDV 618
S D L SG K + L+D+ SG+ ++ F H +N V+F N ++ + S D +
Sbjct: 76 SFDNSSLCSGGGDKAVVLWDVASGQVVRKFRG-HAGKVNTVQF-NEEATVILSGSIDSSI 133
Query: 619 KLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQ 663
+ WD R + +P T ++ V DH +L +VD VR+
Sbjct: 134 RCWDCRSRRPEPVQTLDEARDGVS-SVKVSDHEILAGSVDGRVRR 177
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 130 (50.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI +P G A T+ + V + +
Sbjct: 182 GLSWNPNLSGNLLSASDDHTICLWDISAVPKE--GKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 563 E-LFLASGYSKNIALYDINSGRRLQVF--ADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D S + D H +N + F+ +S I AT S D+ V
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 300 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 130 (50.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI +P G A T+ + V + +
Sbjct: 182 GLSWNPNLSGNLLSASDDHTICLWDISAVPKE--GKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 563 E-LFLASGYSKNIALYDINSGRRLQVF--ADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D S + D H +N + F+ +S I AT S D+ V
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 300 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 130 (50.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI +P G A T+ + V + +
Sbjct: 182 GLSWNPNLSGNLLSASDDHTICLWDISAVPKE--GKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 563 E-LFLASGYSKNIALYDINSGRRLQVF--ADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D S + D H +N + F+ +S I AT S D+ V
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 300 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 129 (50.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI +P G A T+ + V + +
Sbjct: 147 GLSWNPNLSGHLLSASDDHTICLWDISAVPKE--GKVVDAKTIFTGHTAVVEDVSWHLLH 204
Query: 563 E-LFLASGYSKNIALYDINSGRRLQVF--ADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D S + D H +N + F+ +S I AT S D+ V
Sbjct: 205 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 264
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 265 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 301
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 129 (50.5 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI +P G A T+ + V + +
Sbjct: 182 GLSWNPNLSGHLLSASDDHTICLWDISAVPKE--GKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 563 E-LFLASGYSKNIALYDINSGRRLQVF--ADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D S + D H +N + F+ +S I AT S D+ V
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 300 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 129 (50.5 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI +P G A T+ + V + +
Sbjct: 182 GLSWNPNLSGHLLSASDDHTICLWDISAVPKE--GKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 563 E-LFLASGYSKNIALYDINSGRRLQVF--ADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D S + D H +N + F+ +S I AT S D+ V
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 300 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 129 (50.5 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI +P G A T+ + V + +
Sbjct: 182 GLSWNPNLSGHLLSASDDHTICLWDISAVPKE--GKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 563 E-LFLASGYSKNIALYDINSGRRLQVF--ADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D S + D H +N + F+ +S I AT S D+ V
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 300 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 129 (50.5 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI +P G A T+ + V + +
Sbjct: 182 GLSWNPNLSGHLLSASDDHTICLWDISAVPKE--GKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 563 E-LFLASGYSKNIALYDINSGRRLQVF--ADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D S + D H +N + F+ +S I AT S D+ V
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 300 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 129 (50.5 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI +P G A T+ + V + +
Sbjct: 182 GLSWNPNLSGHLLSASDDHTICLWDISAVPKE--GKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 563 E-LFLASGYSKNIALYDINSGRRLQVF--ADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D S + D H +N + F+ +S I AT S D+ V
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 300 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 129 (50.5 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI +P G A T+ + V + +
Sbjct: 182 GLSWNPNLSGHLLSASDDHTICLWDISAVPKE--GKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 563 E-LFLASGYSKNIALYDINSGRRLQVF--ADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D S + D H +N + F+ +S I AT S D+ V
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 300 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 129 (50.5 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI +P G A T+ + V + +
Sbjct: 182 GLSWNPNLSGHLLSASDDHTICLWDISAVPKE--GKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 563 E-LFLASGYSKNIALYDINSGRRLQVF--ADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D S + D H +N + F+ +S I AT S D+ V
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 300 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 129 (50.5 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI +P G A T+ + V + +
Sbjct: 182 GLSWNPNLSGHLLSASDDHTICLWDISAVPKE--GKVVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 563 E-LFLASGYSKNIALYDINSGRRLQVF--ADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D S + D H +N + F+ +S I AT S D+ V
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 300 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|B4LS78 [details] [associations]
symbol:GJ17641 "Ribosome biogenesis protein WDR12 homolog"
species:7244 "Drosophila virilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH940649 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_002052609.1 ProteinModelPortal:B4LS78 STRING:B4LS78
EnsemblMetazoa:FBtr0233566 GeneID:6629233 KEGG:dvi:Dvir_GJ17641
FlyBase:FBgn0204810 InParanoid:B4LS78 Uniprot:B4LS78
Length = 419
Score = 117 (46.2 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 43/169 (25%), Positives = 72/169 (42%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G S+ + W+ + L+ GS + +LK++D++ + G+ T FD S
Sbjct: 249 GHRESISAVQWMDA--TTLVTGSWDHTLKVWDLQ-----LEGIKTEIST-NKSIFDASYS 300
Query: 556 VHVNSMDELFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
++ L + + KN+ LYD N G ++ H + V +SN +F + S
Sbjct: 301 ----KLNRLIVTASADKNLRLYDARTNQGSVVRNTYLGHNAWVQTVMWSNTEEFLFVSGS 356
Query: 614 FDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
+D KLWD R P P Y V+ + Y++ DN VR
Sbjct: 357 YDTQNKLWDCRS-PKAPLYDLLGHGEKVLDIDWSNPKYIVSGGADNTVR 404
Score = 57 (25.1 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 177 LSMCETRVGNLWTTIAALS-KLPS-LAELRFQNWLCCDDTGNSSGSSDQDDKTDFSQLNI 234
L+ C N+WT +P A ++ +W+ DD S+ QD Q NI
Sbjct: 119 LTGCYDNTINIWTNKGKHKLTIPGHTAPIKAVDWISMDDENGRFVSTSQDQTAMLWQWNI 178
Query: 235 CSS 237
S+
Sbjct: 179 ASN 181
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 126 (49.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 30/105 (28%), Positives = 51/105 (48%)
Query: 560 SMDELFLASGYS-KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDV 618
S D L SG K + L+D+ SG+ ++ F H +N V+F N ++ + S D +
Sbjct: 76 SFDNSSLCSGGGDKAVVLWDVASGQVVRKFRG-HAGKVNTVQF-NEEATVILSGSIDSTI 133
Query: 619 KLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQ 663
+ WD R + +P T ++ + DH +L +VD VR+
Sbjct: 134 RCWDCRSRKPEPVQTLDEARDGIS-SVKVSDHEVLAGSVDGRVRR 177
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 128 (50.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI P G A T+ + V + +
Sbjct: 182 GLSWNPNLSGNLLSASDDHTICLWDISGAPKE--GKIVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 563 E-LFLASGYSKNIALYDINSGRRLQVF--ADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D S + D H +N + F+ +S I AT S D+ V
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 300 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|B3N534 [details] [associations]
symbol:GG10358 "Ribosome biogenesis protein WDR12 homolog"
species:7220 "Drosophila erecta" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH954177
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001969920.1
ProteinModelPortal:B3N534 EnsemblMetazoa:FBtr0130412 GeneID:6542886
KEGG:der:Dere_GG10358 FlyBase:FBgn0102667 Uniprot:B3N534
Length = 420
Score = 122 (48.0 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 46/169 (27%), Positives = 72/169 (42%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G SV + W+ S L+ GS + +LK++D+ S+ G+ T FD S
Sbjct: 250 GHRESVSAVQWMDA--STLLTGSWDHTLKVWDL-----SLEGIKTEIST-NKSIFDASYS 301
Query: 556 VHVNSMDELFLASGYSKNIALYD--INSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
++ L L + KN+ LYD N G ++ H + V +S +F + +
Sbjct: 302 ----KLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGA 357
Query: 614 FDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
+D KLWD R P P Y V+ + Y++ VDN VR
Sbjct: 358 YDNQNKLWDCRS-PKAPLYDLLGHGEKVLDIDWSNPKYIVSGGVDNTVR 405
Score = 51 (23.0 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 177 LSMCETRVGNLWTTIAA--LSKLPSLAELRFQNWLCCDDTGNSSGSSDQDDKTDFSQLNI 234
LS C NLWT L+ A ++ +W+ D+ S+ QD Q N+
Sbjct: 120 LSGCYDNTLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNV 179
Query: 235 CSS 237
S+
Sbjct: 180 GSN 182
>UNIPROTKB|B4P116 [details] [associations]
symbol:GE13328 "Ribosome biogenesis protein WDR12 homolog"
species:7245 "Drosophila yakuba" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CM000157 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
EMBL:AY231921 RefSeq:XP_002088279.1 ProteinModelPortal:B4P116
STRING:B4P116 EnsemblMetazoa:FBtr0259846 GeneID:6527185
KEGG:dya:Dyak_GE13328 FlyBase:FBgn0068268 Uniprot:B4P116
Length = 420
Score = 122 (48.0 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 46/169 (27%), Positives = 72/169 (42%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G SV + W+ S L+ GS + +LK++D+ S+ G+ T FD S
Sbjct: 250 GHRESVSAVQWMDA--STLLTGSWDHTLKVWDL-----SLEGIKTEIST-NKSIFDASYS 301
Query: 556 VHVNSMDELFLASGYSKNIALYD--INSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
++ L L + KN+ LYD N G ++ H + V +S +F + +
Sbjct: 302 ----KLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGA 357
Query: 614 FDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
+D KLWD R P P Y V+ + Y++ VDN VR
Sbjct: 358 YDNQNKLWDCRS-PKAPLYDLLGHGEKVLDIDWSNPKYIVSGGVDNTVR 405
Score = 51 (23.0 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 177 LSMCETRVGNLWTTIAA--LSKLPSLAELRFQNWLCCDDTGNSSGSSDQDDKTDFSQLNI 234
LS C NLWT L+ A ++ +W+ D+ S+ QD Q N+
Sbjct: 120 LSGCYDNTLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNV 179
Query: 235 CSS 237
S+
Sbjct: 180 GSN 182
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 138 (53.6 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 45/166 (27%), Positives = 85/166 (51%)
Query: 558 VN-SMDELFLASGYSKNIALYDINSGRRLQVFADMHKE----HINVVKFSNHSPSIFATS 612
VN S D +LA+G +++ +YD+++G+++ F D ++ +I V FS + AT
Sbjct: 287 VNFSNDGKYLATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDG-NYLATG 345
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSAVDNEVRQLLAVDGRV 671
+ D+ VK+WD+ K IQ +T + ++ + +S D +++ + D + + G+
Sbjct: 346 AEDKTVKVWDIHTKKIQ--HTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKC 403
Query: 672 HLNFGITATGSSQNYTR-SYYLNGRDYIVSGSCDEHVVRICCAQTG 716
G G T + +GR + +GS D ++VR+ AQTG
Sbjct: 404 AFTLGNEEVGPKNGVTSVAMSPDGR-LVAAGSLD-NIVRLWDAQTG 447
Score = 38 (18.4 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 279 SNLVPQLDGEIDLWNEVSFDAFSNQNEE 306
S L+ L GEID N + +Q ++
Sbjct: 9 SELLDNLKGEIDALNH-ELSLYKHQKDD 35
>UNIPROTKB|B4GT01 [details] [associations]
symbol:GL26386 "Ribosome biogenesis protein WDR12 homolog"
species:7234 "Drosophila persimilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH479189 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002021667.1
ProteinModelPortal:B4GT01 EnsemblMetazoa:FBtr0192001 GeneID:6596580
KEGG:dpe:Dper_GL26386 FlyBase:FBgn0163968 Uniprot:B4GT01
Length = 419
Score = 118 (46.6 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 45/169 (26%), Positives = 71/169 (42%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G S+ + W+ S L+ GS + +LK++D+ S+ G+ T FD S
Sbjct: 249 GHRESISAVQWMDA--STLLTGSWDHTLKVWDL-----SLEGIKAEIST-NKSIFDASYS 300
Query: 556 VHVNSMDELFLASGYSKNIALYD--INSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
++ L L + KN+ LYD N G ++ H + V +S +F + S
Sbjct: 301 ----KLNHLILTASADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGS 356
Query: 614 FDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
+D KLWD R P P Y V+ + Y++ DN VR
Sbjct: 357 YDNQNKLWDCRS-PKAPLYDLLGHGEKVLDIDWTNPKYIVSGGSDNTVR 404
Score = 55 (24.4 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 16/60 (26%), Positives = 25/60 (41%)
Query: 177 LSMCETRVGNLWTTIAA-LSKLPS-LAELRFQNWLCCDDTGNSSGSSDQDDKTDFSQLNI 234
L+ C N+WT + +P A ++ +W+ DD SS QD Q N+
Sbjct: 119 LTGCYDNTLNIWTNKGKHILTIPGHTAPIKAVDWISLDDDTGRFVSSSQDQTAMLWQWNV 178
>UNIPROTKB|Q29KQ0 [details] [associations]
symbol:GA19813 "Ribosome biogenesis protein WDR12 homolog"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH379061 GO:GO:0070545
GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154 HSSP:P61964 KO:K14863
OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001356065.1
ProteinModelPortal:Q29KQ0 GeneID:4816649 KEGG:dpo:Dpse_GA19813
FlyBase:FBgn0079809 InParanoid:Q29KQ0 Uniprot:Q29KQ0
Length = 419
Score = 118 (46.6 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 45/169 (26%), Positives = 71/169 (42%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G S+ + W+ S L+ GS + +LK++D+ S+ G+ T FD S
Sbjct: 249 GHRESISAVQWMDA--STLLTGSWDHTLKVWDL-----SLEGIKAEIST-NKSIFDASYS 300
Query: 556 VHVNSMDELFLASGYSKNIALYD--INSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
++ L L + KN+ LYD N G ++ H + V +S +F + S
Sbjct: 301 ----KLNHLILTASADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGS 356
Query: 614 FDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
+D KLWD R P P Y V+ + Y++ DN VR
Sbjct: 357 YDNQNKLWDCRS-PKAPLYDLLGHGEKVLDIDWSNPKYIVSGGSDNTVR 404
Score = 55 (24.4 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 16/60 (26%), Positives = 25/60 (41%)
Query: 177 LSMCETRVGNLWTTIAA-LSKLPS-LAELRFQNWLCCDDTGNSSGSSDQDDKTDFSQLNI 234
L+ C N+WT + +P A ++ +W+ DD SS QD Q N+
Sbjct: 119 LTGCYDNTLNIWTNKGKHILTIPGHTAPIKAVDWISLDDDTGRFVSSSQDQTAMLWQWNV 178
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 50/198 (25%), Positives = 89/198 (44%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN 573
+++ SD+ +LKL+D+ S+ G F V+ N + ++ + +
Sbjct: 86 IVSASDDKTLKLWDVE--TGSLIKTLIGHTNYAF-------CVNFNPQSNMIVSGSFDET 136
Query: 574 IALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYT 633
+ ++D+ +G+ L+V H + + V F N S+ +SS+D ++WD
Sbjct: 137 VRIWDVTTGKCLKVLP-AHSDPVTAVDF-NRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 194
Query: 634 ASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATG--SSQNYTRSYY 691
+ V FSP+ ++LV +DN +R L + L T TG ++Q S +
Sbjct: 195 DDENPPVSFVRFSPNGKFILVGTLDNTLR-LWNISSAKFLK---TYTGHVNAQYCISSAF 250
Query: 692 --LNGRDYIVSGSCDEHV 707
NG+ IVSGS D V
Sbjct: 251 SVTNGKR-IVSGSEDNCV 267
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 54/203 (26%), Positives = 95/203 (46%)
Query: 507 LKKYPSKLIA-GSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELF 565
L K +L+A G D+ + L+ I + P I + G + + SV +N+ +EL
Sbjct: 28 LGKASGRLLATGGDDCRVNLWSI-NKPNCIMSL---TGHTS-----PVESVRLNTPEELI 78
Query: 566 LASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQ 625
+A S +I ++D+ + + L+ HK +I + F + + A+ S D ++KLWD+R+
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMG-HKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR 136
Query: 626 KPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNF-GITATGSSQ 684
K Y S + FSPD +L +A D+ V+ G++ F G T +
Sbjct: 137 KGCVFRYRGHSQAVRCLR-FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 685 NYTRSYYLNGRDYIVSGSCDEHV 707
+ + YL + SGS D +
Sbjct: 196 EFHPNEYL-----LASGSSDRTI 213
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 43/204 (21%), Positives = 93/204 (45%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN 573
L++ SD+ +LK++D+ ++ + G F + N L ++ + ++
Sbjct: 102 LVSASDDKTLKIWDVSS-GKCLKTLK-GHSNYVF-------CCNFNPQSNLIVSGSFDES 152
Query: 574 IALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYT 633
+ ++D+ +G+ L+ H + ++ V F N S+ +SS+D ++WD
Sbjct: 153 VRIWDVKTGKCLKTLP-AHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 634 ASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATGSSQNYT--RSYY 691
+ V FSP+ Y+L + +DN ++ G+ + ++ Y ++
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY---TCHKNEKYCIFANFS 267
Query: 692 LNGRDYIVSGSCDEHVVRICCAQT 715
+ G +IVSGS ++++V I QT
Sbjct: 268 VTGGKWIVSGS-EDNLVYIWNLQT 290
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI +P G A T+ + V + +
Sbjct: 182 GLSWNPNLSGCLLSASDDHTICLWDISTVPKE--GKIVDAKTIFTGHTAVVEDVSWHLLH 239
Query: 563 E-LFLASGYSKNIALYDINSGRRLQVF--ADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D S + D H +N + F+ +S I AT S D+ V
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 300 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 129 (50.5 bits), Expect = 0.00013, P = 0.00013
Identities = 54/203 (26%), Positives = 95/203 (46%)
Query: 507 LKKYPSKLIA-GSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELF 565
L K +L+A G D+ + L+ I + P I + G + + SV +N+ +EL
Sbjct: 28 LGKASGRLLATGGDDCRVNLWSI-NKPNCIMSL---TGHTS-----PVESVRLNTPEELI 78
Query: 566 LASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQ 625
+A S +I ++D+ + + L+ HK +I + F + + A+ S D ++KLWD+R+
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMG-HKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR 136
Query: 626 KPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNF-GITATGSSQ 684
K Y S + FSPD +L +A D+ V+ G++ F G T +
Sbjct: 137 KGCVFRYRGHSQAVRCLR-FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 685 NYTRSYYLNGRDYIVSGSCDEHV 707
+ + YL + SGS D +
Sbjct: 196 EFHPNEYL-----LASGSSDRTI 213
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 129 (50.5 bits), Expect = 0.00013, P = 0.00013
Identities = 54/203 (26%), Positives = 95/203 (46%)
Query: 507 LKKYPSKLIA-GSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELF 565
L K +L+A G D+ + L+ I + P I + G + + SV +N+ +EL
Sbjct: 28 LGKASGRLLATGGDDCRVNLWSI-NKPNCIMSL---TGHTS-----PVESVRLNTPEELI 78
Query: 566 LASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQ 625
+A S +I ++D+ + + L+ HK +I + F + + A+ S D ++KLWD+R+
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMG-HKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR 136
Query: 626 KPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNF-GITATGSSQ 684
K Y S + FSPD +L +A D+ V+ G++ F G T +
Sbjct: 137 KGCVFRYRGHSQAVRCLR-FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 685 NYTRSYYLNGRDYIVSGSCDEHV 707
+ + YL + SGS D +
Sbjct: 196 EFHPNEYL-----LASGSSDRTI 213
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 129 (50.5 bits), Expect = 0.00013, P = 0.00013
Identities = 54/203 (26%), Positives = 95/203 (46%)
Query: 507 LKKYPSKLIA-GSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELF 565
L K +L+A G D+ + L+ I + P I + G + + SV +N+ +EL
Sbjct: 28 LGKASGRLLATGGDDCRVNLWSI-NKPNCIMSL---TGHTS-----PVESVRLNTPEELI 78
Query: 566 LASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQ 625
+A S +I ++D+ + + L+ HK +I + F + + A+ S D ++KLWD+R+
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMG-HKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR 136
Query: 626 KPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNF-GITATGSSQ 684
K Y S + FSPD +L +A D+ V+ G++ F G T +
Sbjct: 137 KGCVFRYRGHSQAVRCLR-FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 685 NYTRSYYLNGRDYIVSGSCDEHV 707
+ + YL + SGS D +
Sbjct: 196 EFHPNEYL-----LASGSSDRTI 213
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 129 (50.5 bits), Expect = 0.00014, P = 0.00014
Identities = 54/203 (26%), Positives = 95/203 (46%)
Query: 507 LKKYPSKLIA-GSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELF 565
L K +L+A G D+ + L+ I + P I + G + + SV +N+ +EL
Sbjct: 28 LGKASGRLLATGGDDCRVNLWSI-NKPNCIMSL---TGHTS-----PVESVRLNTPEELI 78
Query: 566 LASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQ 625
+A S +I ++D+ + + L+ HK +I + F + + A+ S D ++KLWD+R+
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMG-HKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR 136
Query: 626 KPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNF-GITATGSSQ 684
K Y S + FSPD +L +A D+ V+ G++ F G T +
Sbjct: 137 KGCVFRYRGHSQAVRCLR-FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 685 NYTRSYYLNGRDYIVSGSCDEHV 707
+ + YL + SGS D +
Sbjct: 196 EFHPNEYL-----LASGSSDRTI 213
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 129 (50.5 bits), Expect = 0.00014, P = 0.00014
Identities = 54/203 (26%), Positives = 95/203 (46%)
Query: 507 LKKYPSKLIA-GSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELF 565
L K +L+A G D+ + L+ I + P I + G + + SV +N+ +EL
Sbjct: 28 LGKASGRLLATGGDDCRVNLWSI-NKPNCIMSL---TGHTS-----PVESVRLNTPEELI 78
Query: 566 LASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQ 625
+A S +I ++D+ + + L+ HK +I + F + + A+ S D ++KLWD+R+
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMG-HKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR 136
Query: 626 KPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNF-GITATGSSQ 684
K Y S + FSPD +L +A D+ V+ G++ F G T +
Sbjct: 137 KGCVFRYRGHSQAVRCLR-FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Query: 685 NYTRSYYLNGRDYIVSGSCDEHV 707
+ + YL + SGS D +
Sbjct: 196 EFHPNEYL-----LASGSSDRTI 213
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 30/105 (28%), Positives = 51/105 (48%)
Query: 560 SMDELFLASGYS-KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDV 618
S D L SG K + L+D+ SG+ ++ F H +N V+F N ++ + S D +
Sbjct: 76 SFDNSSLCSGGGDKAVVLWDVASGQVVRKFRG-HAGKVNTVQF-NEEATVILSGSIDSSI 133
Query: 619 KLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQ 663
+ WD R + +P T ++ + DH +L +VD VR+
Sbjct: 134 RCWDCRSRRPEPVQTLDEARDGIS-SVKVSDHEVLSGSVDGRVRR 177
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 128 (50.1 bits), Expect = 0.00014, P = 0.00014
Identities = 42/149 (28%), Positives = 72/149 (48%)
Query: 560 SMDELFLASGYS-KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDV 618
S D +LA+G K I ++DI + +F+ H++ I + F+ + I A+ S D+ V
Sbjct: 325 SPDGKYLATGAEDKQIRVWDIATRTIKHIFSG-HEQDIYSLDFAGNGRYI-ASGSGDKTV 382
Query: 619 KLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGIT 678
+LWD+ + + YT S G V SPD Y+ ++D VR G +
Sbjct: 383 RLWDIAEGKL--VYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENP 440
Query: 679 ATGSSQNYTRSYYLNGRDYIVSGSCDEHV 707
Y+ ++ NG++ +VSGS D+ +
Sbjct: 441 DGHKDSVYSVAFAPNGKE-LVSGSLDKTI 468
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI P G A + + V + +
Sbjct: 172 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKE--GKIVDAKAIFTGHSAVVEDVAWHLLH 229
Query: 563 E-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D N+ + D H +N + F+ +S I AT S D+ V
Sbjct: 230 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 289
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ +T S K + V +SP + +L S+
Sbjct: 290 LWDLRNLKLK-LHTFESHKDEIFQVHWSPHNETILASS 326
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI P G A + + V + +
Sbjct: 172 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKE--GKIVDAKAIFTGHSAVVEDVAWHLLH 229
Query: 563 E-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D N+ + D H +N + F+ +S I AT S D+ V
Sbjct: 230 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 289
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ +T S K + V +SP + +L S+
Sbjct: 290 LWDLRNLKLK-LHTFESHKDEIFQVHWSPHNETILASS 326
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 132 (51.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 53/218 (24%), Positives = 105/218 (48%)
Query: 499 NSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHV 558
++V GLC+ K+ + L + S +GS++ +D+ IR ++ T T Q + + V
Sbjct: 382 SAVSGLCFSKR-GNVLFSSSLDGSVRAWDL------IRYRNFR--TFTAPSRVQFSCIAV 432
Query: 559 NSMDELFLASGY-SKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQD 617
+ E+ A S I ++ + +G+ L+ A H+ ++ + F N S S+ A+ S+D+
Sbjct: 433 DPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAG-HEGPVSSLSF-NSSGSLLASGSWDKT 490
Query: 618 VKLWDL--RQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEV--------RQLLAV 667
V++WD+ R ++P S + + F PD + V+++D ++ +Q +
Sbjct: 491 VRIWDIFSRSGIVEPLPIPSDV---LSLAFHPDGKEVCVASLDGQLTFWNVQEGKQTSLI 547
Query: 668 DGRVHLNFG--ITATGSSQNYTRSYYLNGRDYIVSGSC 703
DGR L+ G +++N + + Y GSC
Sbjct: 548 DGRKDLSGGRRFDDARTAENSSLNKTFTSICYSADGSC 585
Score = 47 (21.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 226 KTDFSQLNICSSFGAYGNVVINPD 249
KT+F N+ + + GN+V PD
Sbjct: 2 KTEFGFSNLVGTIFSKGNLVFTPD 25
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI P G A + + V + +
Sbjct: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKE--GKIVDAKAIFTGHSAVVEDVAWHLLH 238
Query: 563 E-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D N+ + D H +N + F+ +S I AT S D+ V
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ +T S K + V +SP + +L S+
Sbjct: 299 LWDLRNLKLK-LHTFESHKDEIFQVHWSPHNETILASS 335
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI P G A + + V + +
Sbjct: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKE--GKIVDAKAIFTGHSAVVEDVAWHLLH 238
Query: 563 E-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D N+ + D H +N + F+ +S I AT S D+ V
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ +T S K + V +SP + +L S+
Sbjct: 299 LWDLRNLKLK-LHTFESHKDEIFQVHWSPHNETILASS 335
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI P G A + + V + +
Sbjct: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKE--GKIVDAKAIFTGHSAVVEDVAWHLLH 238
Query: 563 E-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D N+ + D H +N + F+ +S I AT S D+ V
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ +T S K + V +SP + +L S+
Sbjct: 299 LWDLRNLKLK-LHTFESHKDEIFQVHWSPHNETILASS 335
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI P G A + + V + +
Sbjct: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKE--GKIVDAKAIFTGHSAVVEDVAWHLLH 238
Query: 563 E-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D N+ + D H +N + F+ +S I AT S D+ V
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ +T S K + V +SP + +L S+
Sbjct: 299 LWDLRNLKLK-LHTFESHKDEIFQVHWSPHNETILASS 335
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI P G A + + V + +
Sbjct: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKE--GKIVDAKAIFTGHSAVVEDVAWHLLH 238
Query: 563 E-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D N+ + D H +N + F+ +S I AT S D+ V
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ +T S K + V +SP + +L S+
Sbjct: 299 LWDLRNLKLK-LHTFESHKDEIFQVHWSPHNETILASS 335
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI P G A + + V + +
Sbjct: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKE--GKIVDAKAIFTGHSAVVEDVAWHLLH 238
Query: 563 E-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D N+ + D H +N + F+ +S I AT S D+ V
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ +T S K + V +SP + +L S+
Sbjct: 299 LWDLRNLKLK-LHTFESHKDEIFQVHWSPHNETILASS 335
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI P G A + + V + +
Sbjct: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKE--GKIVDAKAIFTGHSAVVEDVAWHLLH 238
Query: 563 E-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D N+ + D H +N + F+ +S I AT S D+ V
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ +T S K + V +SP + +L S+
Sbjct: 299 LWDLRNLKLK-LHTFESHKDEIFQVHWSPHNETILASS 335
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 43/159 (27%), Positives = 73/159 (45%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI P G A V + V + +
Sbjct: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKE--GKIVDAKAVFTGHSAVVEDVAWHLLH 238
Query: 563 E-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D N+ + D H +N + F+ +S I AT S D+ V
Sbjct: 239 ESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 620 LWDLRQKPIQPCYTASSSKGNV--MVCFSPDDHYLLVSA 656
LWDLR ++ +T S K + +V +SP + +L S+
Sbjct: 299 LWDLRNLKLK-LHTFESHKDEIFQVVHWSPHNETILASS 336
>TAIR|locus:2025762 [details] [associations]
symbol:DRS1 "AT1G80710" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0009414 "response to
water deprivation" evidence=IMP] [GO:0009737 "response to abscisic
acid stimulus" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009414 eggNOG:COG2319 EMBL:AC011713
GO:GO:0080008 OMA:VFAIANM IPI:IPI00545447 PIR:E96839
RefSeq:NP_178186.1 UniGene:At.50057 ProteinModelPortal:Q9SAI7
SMR:Q9SAI7 EnsemblPlants:AT1G80710.1 GeneID:844410
KEGG:ath:AT1G80710 TAIR:At1g80710 HOGENOM:HOG000242689
InParanoid:Q9SAI7 PhylomeDB:Q9SAI7 ProtClustDB:CLSN2681927
Genevestigator:Q9SAI7 Uniprot:Q9SAI7
Length = 516
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 42/155 (27%), Positives = 72/155 (46%)
Query: 512 SKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYS 571
S++I+ S +G ++L D+ S+ + Y F S N L+ Y
Sbjct: 277 SRVISSSYDGLIRLMDVEK---SVFDLVYSTDEAIFS-----LSQRPNDEQSLYFGQDYG 328
Query: 572 KNIALYDINSGRRLQVFA-DMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLR----QK 626
++D+ +G+ VF ++H+ IN + F+ +P + ATSS D LWDLR +K
Sbjct: 329 V-FNVWDLRAGK--SVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKK 385
Query: 627 PIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEV 661
P + T + S+ FSP L +++DN +
Sbjct: 386 P-KTLSTVNHSRAVHSAYFSPSGLSLATTSLDNYI 419
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI P G A + + V + +
Sbjct: 225 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKE--GKIVDAKAIFTGHSAVVEDVAWHLLH 282
Query: 563 E-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D N+ + D H +N + F+ +S I AT S D+ V
Sbjct: 283 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 342
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ +T S K + V +SP + +L S+
Sbjct: 343 LWDLRNLKLK-LHTFESHKDEIFQVHWSPHNETILASS 379
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI P G A + + V + +
Sbjct: 225 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKE--GKIVDAKAIFTGHSAVVEDVAWHLLH 282
Query: 563 E-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D N+ + D H +N + F+ +S I AT S D+ V
Sbjct: 283 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 342
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ +T S K + V +SP + +L S+
Sbjct: 343 LWDLRNLKLK-LHTFESHKDEIFQVHWSPHNETILASS 379
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 125 (49.1 bits), Expect = 0.00019, P = 0.00019
Identities = 44/169 (26%), Positives = 82/169 (48%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPS--IRGMHYGAGTVTFDEFDQLTSVHVNS 560
GL W L++GS + + L+D+ + MH G + E D + H+ +
Sbjct: 174 GLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIE-D--VAWHMKN 230
Query: 561 MDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKL 620
+ +F ++G + ++D+ + + +Q +H+ IN + F+ + + AT+S D V L
Sbjct: 231 -ENIFGSAGDDCQLVIWDLRTNQ-MQHQVKVHEREINYLSFNPFNEWVLATASSDSTVAL 288
Query: 621 WDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSAVDNEVRQLLAVD 668
+DLR K P + S +G V V + P+ +L S+ E R+L+ D
Sbjct: 289 FDLR-KLTAPLHVLSKHEGEVFQVEWDPNHETVLASS--GEDRRLMVWD 334
>WB|WBGene00000773 [details] [associations]
symbol:cpf-1 species:6239 "Caenorhabditis elegans"
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040010 "positive regulation
of growth rate" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0040027 HOGENOM:HOG000234077 KO:K14406
GeneTree:ENSGT00700000104487 GO:GO:0001703 EMBL:Z68315 PIR:T21482
RefSeq:NP_495822.1 ProteinModelPortal:Q19864 SMR:Q19864
STRING:Q19864 PaxDb:Q19864 EnsemblMetazoa:F28C6.3 GeneID:174378
KEGG:cel:CELE_F28C6.3 UCSC:F28C6.3 CTD:174378 WormBase:F28C6.3
InParanoid:Q19864 OMA:TKFITTH NextBio:883778 Uniprot:Q19864
Length = 430
Score = 125 (49.1 bits), Expect = 0.00019, P = 0.00019
Identities = 57/235 (24%), Positives = 103/235 (43%)
Query: 512 SKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYS 571
S LI+GS++ ++KL+D + M T E + ++ + E L +
Sbjct: 183 SILISGSNDKTVKLFDFSKTAVK-KAMK------TLSEVYPVRALSCHPGGEFLLVATDH 235
Query: 572 KNIALYDINSGRRLQVFA-----DMHKEHINVVKFSNHSPSIFATSSFDQDVKLWD-LRQ 625
+ LY+I + Q +A D H E + V +S ++ ++ T+S D VK+WD +
Sbjct: 236 PTVRLYNIETA---QAYASANPDDQHTESVTDVHYSENA-RLYVTASKDGHVKIWDGVSN 291
Query: 626 KPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNF-GITATGSSQ 684
+ ++ A F+ + Y+L S +D+ V+ R + + G ATG+
Sbjct: 292 RCVETFKRAHDGSSICSAKFTKNGKYILTSGMDSIVKLWELSTNRCLIVYTGAGATGAQD 351
Query: 685 NYTRSYYLNGRDYIVSGSCDEHVVRICC--AQTGRRLRDISLEGKGSGTSMFVQS 737
T + + + DY++ DE +C A+ R R ++L G S FV S
Sbjct: 352 FATNASFNHNEDYVLFP--DEKSGSMCSWDARNSDRKRLLAL-GHTSACRTFVHS 403
>MGI|MGI:1355314 [details] [associations]
symbol:Ddb2 "damage specific DNA binding protein 2"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006290 "pyrimidine dimer repair"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0009411 "response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0051865 "protein
autoubiquitination" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1355314
GO:GO:0005634 GO:GO:0009411 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677
eggNOG:COG2319 GO:GO:0004842 GO:GO:0000209 GO:GO:0051865 KO:K10140
CTD:1643 GeneTree:ENSGT00510000047881 HOGENOM:HOG000231440
HOVERGEN:HBG000713 OMA:NSAYFNP OrthoDB:EOG40K7ZV GO:GO:0006290
EMBL:AY027937 IPI:IPI00114927 RefSeq:NP_082395.2 UniGene:Mm.389334
ProteinModelPortal:Q99J79 SMR:Q99J79 STRING:Q99J79
PhosphoSite:Q99J79 PaxDb:Q99J79 PRIDE:Q99J79
Ensembl:ENSMUST00000028696 GeneID:107986 KEGG:mmu:107986
InParanoid:Q99J79 NextBio:359837 Bgee:Q99J79 CleanEx:MM_DDB2
Genevestigator:Q99J79 GermOnline:ENSMUSG00000002109 Uniprot:Q99J79
Length = 432
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 59/252 (23%), Positives = 103/252 (40%)
Query: 422 RSLCAAKVGSSAWPCLHT-LTVSGNHMGDENRSFRPRQ-FE-------YHPSISCLMVFG 472
R L K+G + W L L S H + FR F+ +HP+ + G
Sbjct: 71 RDLYQHKLGKATWSSLQQGLQKSFLHSLASYQVFRKAAPFDRRTTSLAWHPTHPSTLAVG 130
Query: 473 TLDGXXXXXXXXXXXXXSYIPSFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMP 532
+ G ++ GA S+ GL + ++ A S G+ +L D +
Sbjct: 131 SKGGDIMIWNFGIKDKPIFLKGIGAGGSITGLKFNHLNTNQFFASSMEGTTRLQDFKG-- 188
Query: 533 PSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMH 592
+I ++ + + S+ V++ + + ++ L + G+ L MH
Sbjct: 189 -NILRVYTSSNSCKV----WFCSLDVSAKSRVVVTGDNMGHVILLSTD-GKELWNLR-MH 241
Query: 593 KEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM--VCFSPDDH 650
K+ + V + + AT+S DQ VK+WDLRQ + + S + + CFSPD
Sbjct: 242 KKKVAHVALNPCCDWLLATASIDQTVKIWDLRQIKGKDSFLYSLPHRHPVNAACFSPDGA 301
Query: 651 YLLVSAVDNEVR 662
LL + +NE+R
Sbjct: 302 RLLTTDQNNEIR 313
>FB|FBgn0032298 [details] [associations]
symbol:CG6724 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005654 EMBL:AE014134
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 HSSP:P63005 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
GeneTree:ENSGT00640000091456 EMBL:AY118871 RefSeq:NP_609452.1
UniGene:Dm.37812 ProteinModelPortal:Q9VKQ3 SMR:Q9VKQ3 IntAct:Q9VKQ3
MINT:MINT-818926 STRING:Q9VKQ3 PaxDb:Q9VKQ3 PRIDE:Q9VKQ3
EnsemblMetazoa:FBtr0080191 GeneID:34488 KEGG:dme:Dmel_CG6724
UCSC:CG6724-RA FlyBase:FBgn0032298 InParanoid:Q9VKQ3
PhylomeDB:Q9VKQ3 GenomeRNAi:34488 NextBio:788731 Bgee:Q9VKQ3
Uniprot:Q9VKQ3
Length = 420
Score = 119 (46.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 45/169 (26%), Positives = 72/169 (42%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G SV + W+ + L+ GS + +LK++D+ S+ G+ T FD S
Sbjct: 250 GHRESVSAVQWMDA--TTLLTGSWDHTLKVWDL-----SLEGIKTEIST-NKSIFDASYS 301
Query: 556 VHVNSMDELFLASGYSKNIALYD--INSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
++ L L + KN+ LYD N G ++ H + V +S +F + +
Sbjct: 302 ----KLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGA 357
Query: 614 FDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
+D KLWD R P P Y V+ + Y++ VDN VR
Sbjct: 358 YDNQNKLWDCRS-PKAPLYDLLGHGEKVLDIDWSNPKYIVSGGVDNTVR 405
Score = 51 (23.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 177 LSMCETRVGNLWTTIAA--LSKLPSLAELRFQNWLCCDDTGNSSGSSDQDDKTDFSQLNI 234
LS C NLWT L+ A ++ +W+ D+ S+ QD Q N+
Sbjct: 120 LSGCYDNTLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNV 179
Query: 235 CSS 237
S+
Sbjct: 180 GSN 182
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 28/98 (28%), Positives = 48/98 (48%)
Query: 565 FLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLR 624
F + G K I ++D+N+G+ + H IN +++ N SI A+ SFD V+LWD R
Sbjct: 71 FASCGGDKFIQVWDVNTGKVDRRLGG-HLAQINTIRY-NEDSSILASGSFDSKVRLWDCR 128
Query: 625 QKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
P + +K +V +H ++ + D +R
Sbjct: 129 SNSFSPIQVLADAKDSVS-SIDIAEHLIVTGSTDGTLR 165
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 123 (48.4 bits), Expect = 0.00030, P = 0.00030
Identities = 44/169 (26%), Positives = 80/169 (47%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPS--IRGMHYGAGTVTFDEFDQLTSVHVNS 560
GL W L++GS + + L+D+ P + M G + S H+ +
Sbjct: 173 GLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEG---HESAIADVSWHMKN 229
Query: 561 MDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKL 620
+ LF ++G + ++D + + +Q +H+ +N + F+ + + AT+S D V L
Sbjct: 230 -ENLFGSAGEDGRLVIWDTRTNQ-MQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVAL 287
Query: 621 WDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSAVDNEVRQLLAVD 668
+DLR K P + SS +G V V + P+ +L S+ E R+L+ D
Sbjct: 288 FDLR-KLNAPLHVMSSHEGEVFQVEWDPNHETVLASS--GEDRRLMVWD 333
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 125 (49.1 bits), Expect = 0.00031, P = 0.00031
Identities = 61/222 (27%), Positives = 102/222 (45%)
Query: 510 YPSKLIAG-SDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLAS 568
+ S+L+A SD+ ++K++D S++ H G D + SV + S D LAS
Sbjct: 306 HDSRLLASASDDRTVKIWDTE--TGSLQ--HTLEG-----HSDLVRSV-IFSHDSRLLAS 355
Query: 569 GYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPI 628
+ ++D +G LQ + H++ + V FS H + A++S D VK+WD +
Sbjct: 356 ASDSTVKIWDTGTGS-LQHTLEGHRDWVRSVIFS-HDSQLLASASDDSTVKIWDTGTGSL 413
Query: 629 QPCYTASSSKGNVM-VCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATGSSQNYT 687
Q +T + V V FS D LL SA D+ ++ G L T G +++
Sbjct: 414 Q--HTLEGHRDWVRSVIFSHDSQ-LLASASDDSTVKIWDT-GTGSLQH--TLEGH-RDWV 466
Query: 688 RSYYLNGRDYIVSGSCDEHVVRICCAQTGRRLRDISLEGKGS 729
RS + +++ + D+ VRI + G +LEG S
Sbjct: 467 RSVIFSHDSRLLASASDDRTVRIWDTEKGSHKH--TLEGHSS 506
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 126 (49.4 bits), Expect = 0.00031, P = 0.00031
Identities = 41/153 (26%), Positives = 77/153 (50%)
Query: 556 VHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFD 615
+ NS +E +A S ++ L+D+ + + L+ HK I+ + F + A+ S D
Sbjct: 69 IQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMG-HKASISSLDF-HPMGEYLASGSVD 126
Query: 616 QDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNF 675
++KLWD+R+K Y + + FSPD +L ++ D+ V+ + G++ F
Sbjct: 127 SNIKLWDVRRKGCVFRYKGHTQAVRCLA-FSPDGKWLASASDDSTVKLWDLIAGKMITEF 185
Query: 676 GITATGSSQNYTRSYYLNGRDYIV-SGSCDEHV 707
T+ S+ N + ++ N +Y++ SGS D V
Sbjct: 186 --TSHTSAVNVVQ-FHPN--EYLLASGSADRTV 213
Score = 126 (49.4 bits), Expect = 0.00031, P = 0.00031
Identities = 52/174 (29%), Positives = 82/174 (47%)
Query: 492 IPSFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFD 551
I S S +G +++AGS +GSL+L+D+ M + A
Sbjct: 56 IMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKAS-------- 107
Query: 552 QLTSVHVNSMDELFLASG-YSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPS--I 608
++S+ + M E +LASG NI L+D+ R+ VF +K H V+ SP
Sbjct: 108 -ISSLDFHPMGE-YLASGSVDSNIKLWDVR--RKGCVFR--YKGHTQAVRCLAFSPDGKW 161
Query: 609 FATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
A++S D VKLWDL + +T+ +S NV V F P+++ L + D V+
Sbjct: 162 LASASDDSTVKLWDLIAGKMITEFTSHTSAVNV-VQFHPNEYLLASGSADRTVK 214
>SGD|S000000909 [details] [associations]
symbol:GLE2 "RNA export factor associated with the nuclear
pore complex (NPC)" species:4932 "Saccharomyces cerevisiae"
[GO:0005643 "nuclear pore" evidence=IEA;IDA] [GO:0016021 "integral
to membrane" evidence=ISM] [GO:0000973 "posttranscriptional
tethering of RNA polymerase II gene DNA at nuclear periphery"
evidence=IMP] [GO:0000972 "transcription-dependent tethering of RNA
polymerase II gene DNA at nuclear periphery" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031081
"nuclear pore distribution" evidence=IMP] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:2000728
"regulation of mRNA export from nucleus in response to heat stress"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016973 "poly(A)+ mRNA
export from nucleus" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000909 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031
GO:GO:0031965 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005643 EMBL:BK006939 EMBL:U18839
GeneTree:ENSGT00530000063440 TCDB:9.A.14.1.1 GO:GO:0016973
EMBL:AY692884 PIR:S50610 RefSeq:NP_011033.3 RefSeq:NP_011037.3
ProteinModelPortal:P40066 SMR:P40066 DIP:DIP-2452N IntAct:P40066
MINT:MINT-483363 STRING:P40066 PaxDb:P40066 PeptideAtlas:P40066
EnsemblFungi:YER107C GeneID:856844 GeneID:856848 KEGG:sce:YER107C
KEGG:sce:YER112W CYGD:YER107c HOGENOM:HOG000208823 KO:K12623
KO:K14298 OMA:RCITCAP OrthoDB:EOG4C5GT5 NextBio:983165
Genevestigator:P40066 GermOnline:YER107C GO:GO:0031081
GO:GO:0000973 GO:GO:2000728 Uniprot:P40066
Length = 365
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 42/141 (29%), Positives = 67/141 (47%)
Query: 497 AMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSV 556
A +S+ + + + A S +G ++++D+++ P R H + V +
Sbjct: 35 AEDSISDIAFSPQQDFMFSASSWDGKVRIWDVQNGVPQGRAQHESSSPVLCTRW------ 88
Query: 557 HVNSMDELFLASGYSKN-IALYDINSGRRLQVFADMHKEHINVVKFSNHSPS---IFATS 612
S D +ASG N + LYDI SG+ Q+ MH I V++F PS T
Sbjct: 89 ---SNDGTKVASGGCDNALKLYDIASGQTQQI--GMHSAPIKVLRFVQCGPSNTECIVTG 143
Query: 613 SFDQDVKLWDLRQKPIQPCYT 633
S+D+ +K WD+RQ P QP T
Sbjct: 144 SWDKTIKYWDMRQ-P-QPVST 162
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 45/216 (20%), Positives = 97/216 (44%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN 573
++ SD+ +LK+Y++ P+++ G + + + N L ++ + ++
Sbjct: 136 IVTASDDKTLKIYEV----PTVKMAKTLKGHTNY-----VFCCNFNPQSSLVVSGSFDES 186
Query: 574 IALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYT 633
+ ++D+ +G ++ H + ++ V F N S+ + S+D V++WD
Sbjct: 187 VRIWDVRTGMCVKTLP-AHSDPVSAVSF-NRDGSLITSGSYDGLVRIWDTANGQCVKTLV 244
Query: 634 ASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATGSSQN-YT--RSY 690
+ V FSP+ Y+L S +DN ++ G+ + G N Y ++
Sbjct: 245 DDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQY----QGHENNKYCIFANF 300
Query: 691 YLNGRDYIVSGSCDEHVVRICCAQTGRRLRDISLEG 726
+ G +I+SGS ++ + + QT ++ SLEG
Sbjct: 301 SVTGGKWIISGS-EDCKIYVWNLQTKEVVQ--SLEG 333
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 123 (48.4 bits), Expect = 0.00032, P = 0.00032
Identities = 56/235 (23%), Positives = 89/235 (37%)
Query: 438 HTLTVSGN--HMGDENRSFRPRQFEYHPSISCLMVFGTLDGXXXXXXXXXXXXXSYIPSF 495
+T+ +S H GD NR+ R P I M G +P
Sbjct: 120 YTIEISQKIPHDGDVNRA---RYMPQKPEIIATMGEGGNAYIFDTTCHDALTTGEALPQA 176
Query: 496 ---GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF-D 551
G GLCW P L G+++ + L+D++ + + + D
Sbjct: 177 VLKGHTAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTD 236
Query: 552 QLTSVHVNSMDELFLASGYSK-NIALYD--INSGRRLQVFADMHKEHINVVKFSNHSPSI 608
+ V + E LAS + ++D +N H + IN V + + +
Sbjct: 237 IVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYL 296
Query: 609 FATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA-VDNEV 661
AT+S D+ V LWDLR P Q +T + V + +SP D +L S+ D V
Sbjct: 297 LATASADKTVALWDLRN-PYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRV 350
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 45/159 (28%), Positives = 80/159 (50%)
Query: 513 KLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSK 572
+L++GS + S++++D+R S+ T++ + D +T+V V+ +L A +
Sbjct: 311 RLVSGSGDRSVRIWDLRTSQCSL--------TLSIE--DGVTTVAVSPDGKLIAAGSLDR 360
Query: 573 NIALYDINSG---RRLQVFADM---HKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQK 626
+ ++D +G RL + H++ + V FSN+ I A+ S D+ VKLW L K
Sbjct: 361 TVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQI-ASGSLDRTVKLWHLEGK 419
Query: 627 PIQP--C-YTASSSKGNVM-VCFSPDDHYLLVSAVDNEV 661
+ C T K V+ VC +PD+ Y+L + D V
Sbjct: 420 SDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGV 458
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 45/159 (28%), Positives = 80/159 (50%)
Query: 513 KLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSK 572
+L++GS + S++++D+R S+ T++ + D +T+V V+ +L A +
Sbjct: 311 RLVSGSGDRSVRIWDLRTSQCSL--------TLSIE--DGVTTVAVSPDGKLIAAGSLDR 360
Query: 573 NIALYDINSG---RRLQVFADM---HKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQK 626
+ ++D +G RL + H++ + V FSN+ I A+ S D+ VKLW L K
Sbjct: 361 TVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQI-ASGSLDRTVKLWHLEGK 419
Query: 627 PIQP--C-YTASSSKGNVM-VCFSPDDHYLLVSAVDNEV 661
+ C T K V+ VC +PD+ Y+L + D V
Sbjct: 420 SDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGV 458
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 45/212 (21%), Positives = 90/212 (42%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G + + L W + SD+ +L+++D R ++ + G F +
Sbjct: 83 GHSSGISDLAWSSD-SHYTCSASDDCTLRIWDARSPYECLKVLR---GHTNF-----VFC 133
Query: 556 VHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFD 615
V+ N L ++ + + I ++++ +G+ +++ H I+ V F N S+ ++S D
Sbjct: 134 VNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIK-AHSMPISSVHF-NRDGSLIVSASHD 191
Query: 616 QDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNF 675
K+WD ++ S FSP+ ++LV+ +D+ ++ G+ L
Sbjct: 192 GSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKF-LKV 250
Query: 676 GITATGSSQNYTRSYYLNGRDYIVSGSCDEHV 707
T T ++ + YIVSGS D V
Sbjct: 251 YTGHTNKVFCITSAFSVTNGKYIVSGSEDNCV 282
>UNIPROTKB|B4JPT9 [details] [associations]
symbol:GH13339 "Ribosome biogenesis protein WDR12 homolog"
species:7222 "Drosophila grimshawi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH916372 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001992994.1 ProteinModelPortal:B4JPT9 STRING:B4JPT9
EnsemblMetazoa:FBtr0148753 GeneID:6566798 KEGG:dgr:Dgri_GH13339
FlyBase:FBgn0120815 InParanoid:B4JPT9 Uniprot:B4JPT9
Length = 419
Score = 112 (44.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 41/169 (24%), Positives = 72/169 (42%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G S+ + W+ + L+ GS + +LK++D+ ++ G+ T FD
Sbjct: 249 GHRESISAVQWMDG--TTLLTGSWDHTLKVWDL-----NLEGIKTEIST-NKSIFD---- 296
Query: 556 VHVNSMDELFLASGYSKNIALYD--INSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ + ++ L + + KN+ LYD N G ++ H + V +S +F + S
Sbjct: 297 ANFSKLNRLIVTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGS 356
Query: 614 FDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
+D KLWD R P P Y V+ + Y++ DN VR
Sbjct: 357 YDNQNKLWDCRS-PKAPLYDLLGHGEKVLDIDWSNPKYIVSGGADNTVR 404
Score = 56 (24.8 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 17/63 (26%), Positives = 27/63 (42%)
Query: 177 LSMCETRVGNLWTTIAA-LSKLPS-LAELRFQNWLCCDDTGNSSGSSDQDDKTDFSQLNI 234
L+ C N+WT + +P A ++ +WL D+ S+ QD Q NI
Sbjct: 119 LTGCYDNTINIWTNKGKHILTIPGHTAPIKAVDWLSLDEVNGRFVSTSQDQTAMLWQWNI 178
Query: 235 CSS 237
S+
Sbjct: 179 DSN 181
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 130 (50.8 bits), Expect = 0.00037, P = 0.00037
Identities = 54/211 (25%), Positives = 100/211 (47%)
Query: 506 WLKK----YPSKLIAG-SDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNS 560
W+K + S+L+A SD+G++K++D +++ M G D + SV V S
Sbjct: 307 WVKSVVFSHDSRLLASASDDGTVKIWDTA--TGTLQRMLKGHN-------DSVRSV-VFS 356
Query: 561 MDELFLASGYS-KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
D +ASG + + + +++ +G F D H++ + V F++ S + A++S +VK
Sbjct: 357 HDSRLIASGSNDRTVRIWETTTGLLRHTFED-HEDSVMAVSFAHDSRRL-ASASDGGNVK 414
Query: 620 LWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITA 679
+WD R +Q N V FSPD L ++ D V+ A G + T
Sbjct: 415 IWDTRTGSLQNVLEGHDDCVN-SVSFSPDSRLLASASDDRTVKIWHAATGSLQR----TL 469
Query: 680 TGSSQNYTRSYYLNGRDYIVSGSCDEHVVRI 710
G + ++ RS + +++ + D+ V+I
Sbjct: 470 EGHN-DWVRSVVFSHDSRLIASASDDMTVKI 499
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 38/145 (26%), Positives = 67/145 (46%)
Query: 564 LFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDL 623
L +++ K + L+D S + + + H + V F + S + A +S D VK+WD+
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCE-HGGFVTYVDF-HPSGTCIAAASMDNTVKVWDV 216
Query: 624 RQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATGSS 683
R + Y S+ N + F P +YLL ++ D+ ++ L ++GR+ T G
Sbjct: 217 RTHRLLQHYQLHSAAVNAL-SFHPSGNYLLTASSDSTLKILDLMEGRLLY----TLHGHQ 271
Query: 684 QNYTRSYYLNGRDYIVSGSCDEHVV 708
T + +Y SG DE V+
Sbjct: 272 GPATTVAFSRTGEYFASGGSDEQVM 296
>UNIPROTKB|B3MJV8 [details] [associations]
symbol:GF14067 "Ribosome biogenesis protein WDR12 homolog"
species:7217 "Drosophila ananassae" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH902620 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001963192.1 ProteinModelPortal:B3MJV8 STRING:B3MJV8
EnsemblMetazoa:FBtr0118767 GeneID:6496895 KEGG:dan:Dana_GF14067
FlyBase:FBgn0091094 InParanoid:B3MJV8 Uniprot:B3MJV8
Length = 419
Score = 116 (45.9 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 43/169 (25%), Positives = 72/169 (42%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G S+ + W+ S L+ GS + +LK++D+ S+ G+ T FD S
Sbjct: 249 GHRESISAVQWMDA--STLLTGSWDHTLKVWDL-----SLEGIKTEIST-NKSIFDASYS 300
Query: 556 VHVNSMDELFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+++ L + + KN+ LYD N G ++ H + V +S +F + +
Sbjct: 301 ----NLNRLIVTASADKNLRLYDARTNQGSVVRNTYLGHNAWVQAVMWSTTEEFLFVSGA 356
Query: 614 FDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
+D KLWD R P P Y V+ + Y++ DN VR
Sbjct: 357 YDNQNKLWDCRS-PKAPLYDLLGHGEKVLDIDWTNPKYIVSGGADNSVR 404
Score = 51 (23.0 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 177 LSMCETRVGNLWTTIAA--LSKLPSLAELRFQNWLCCDDTGNSSGSSDQDDKTDFSQLNI 234
L+ C N+WT L+ A ++ +W+ D+ SS QD Q N+
Sbjct: 119 LTGCYDNTLNIWTNKGKHILTISGHTAPIKAVDWISLDEESGRFVSSSQDQTAMLWQWNV 178
Query: 235 CSS 237
S+
Sbjct: 179 GSN 181
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 121 (47.7 bits), Expect = 0.00050, P = 0.00050
Identities = 52/210 (24%), Positives = 98/210 (46%)
Query: 500 SVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVN 559
SV +C+ S L+ SD+ S+KL+ + H I + V F + V+
Sbjct: 104 SVRSVCFSADGQS-LLTASDDQSIKLWSV-HRQKIICTLREHNNWVRCARFSPDGQLMVS 161
Query: 560 SMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
D+ + + L+D +S + + F + + + V F S I AT+S D V+
Sbjct: 162 VSDD--------RTVKLWDASSRQLIHTFCEPGG-YSSYVDFHPSSTCI-ATASSDNTVR 211
Query: 620 LWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRV-HLNFGIT 678
+WD+R + Y S+ N + F P ++LL ++ D+ ++ L ++GR+ + G
Sbjct: 212 VWDIRTHTLLQHYQVHSAAVNAL-SFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQ 270
Query: 679 ATGSSQNYTRSYYLNGRDYIVSGSCDEHVV 708
+ S +++RS G + +GS D+ V+
Sbjct: 271 GSASCVSFSRS----GDQFASAGS-DQQVM 295
>UNIPROTKB|B4Q9T6 [details] [associations]
symbol:GD22226 "Ribosome biogenesis protein WDR12 homolog"
species:7240 "Drosophila simulans" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CM000361 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002079018.1
ProteinModelPortal:B4Q9T6 EnsemblMetazoa:FBtr0222136 GeneID:6731883
KEGG:dsi:Dsim_GD22226 FlyBase:FBgn0193635 Uniprot:B4Q9T6
Length = 420
Score = 121 (47.7 bits), Expect = 0.00051, P = 0.00051
Identities = 61/250 (24%), Positives = 96/250 (38%)
Query: 421 TRSLCAAKVGSSAWPCLHTLTVSGNHMGDENRSFRPRQFEYHPSI--SCLMVFGT-LDGX 477
T L VGS+A C+ G+ G ++ S P + + L V+ LD
Sbjct: 171 TAMLWKWNVGSNAVDCVSVC--KGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAELDDG 228
Query: 478 XXXXXXXXXXXXSYIPSF---GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPS 534
P G SV + W+ + L+ GS + +LK++D+ S
Sbjct: 229 VEGSSKRMKESGVRTPKITLQGHRESVSAVQWMDA--TTLLTGSWDYTLKVWDL-----S 281
Query: 535 IRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYD--INSGRRLQVFADMH 592
+ G+ T FD S ++ L L + KN+ LYD N G ++ H
Sbjct: 282 LEGIKTEIST-NKSIFDASYS----KLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGH 336
Query: 593 KEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYL 652
+ V +S +F + ++D KLWD R P P Y V+ + Y+
Sbjct: 337 NAWVQTVMWSTTEEFLFVSGAYDNQNKLWDCRS-PKAPLYDLLGHGDKVLDIDWSNPKYI 395
Query: 653 LVSAVDNEVR 662
+ VDN VR
Sbjct: 396 VSGGVDNSVR 405
>DICTYBASE|DDB_G0275073 [details] [associations]
symbol:pwp1 "periodic tryptophan protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0275073 GO:GO:0005829 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0006364 KO:K14791
OMA:ICARNED RefSeq:XP_643788.1 ProteinModelPortal:Q869X0
STRING:Q869X0 EnsemblProtists:DDB0235359 GeneID:8619833
KEGG:ddi:DDB_G0275073 InParanoid:Q869X0 ProtClustDB:CLSZ2455247
Uniprot:Q869X0
Length = 569
Score = 110 (43.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 51/200 (25%), Positives = 90/200 (45%)
Query: 551 DQLTSVHVNSMDELFLASGYSKN-IALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIF 609
D + S+ NS LASG S N + ++DI + + L F HK+ ++ + +++H +
Sbjct: 264 DGVMSLSWNSHQRNVLASGSSDNTVKVWDITTQQCLNTFTH-HKDKVSCLHWNSHEKTAL 322
Query: 610 ATSSFDQDVKLWDLRQKPIQPCYTASSSKGNV-MVCFSPDDHYLLVSAVDNEVRQLLAVD 668
S D+ V + D+R P Y S KG V + ++P + + D+ +LL D
Sbjct: 323 LIGSHDKHVSILDVRA-P-DSAYKWSV-KGEVESLSWNPHNPKEFIVGTDDG--RLLCYD 377
Query: 669 GRVHLNFG-ITATGSSQNYTRSY--YLNGR-DYIVSGSCDEHVVRICCAQTGRRLRDISL 724
+ + + +SQ + S Y G+ + +GS D H V++ +T + +
Sbjct: 378 ATLGTAAAPVWSVQASQKGSVSCFSYCPGQVGFFATGSSD-HTVKLWNLETSSN-KPTLI 435
Query: 725 EGKGSGTSMFVQSL-RGDPF 743
E K G +F S PF
Sbjct: 436 ESKNLGQEIFTLSFFENSPF 455
Score = 60 (26.2 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 27/106 (25%), Positives = 49/106 (46%)
Query: 282 VPQL--DGEIDLWNEVSFDAFSN----QNEEESSAGVLARCTADVSLKYISCHASPICFE 335
VP + D E D + +FD + + Q+EEE +R T +V LK+I+ + F
Sbjct: 56 VPSVMNDKEKDFYKRYNFDDYDSDEGEQDEEERDENDHSRKTEEVGLKFINRAMKGLMFY 115
Query: 336 KHY-RDYMIASLPK--LKFLDNLPIRKVDR--ERATITYSQYFEHL 376
K D + + + ++ ++++ IR D A +T + HL
Sbjct: 116 KDTDSDPYLTNKEEEDIEDIEDVIIRPTDSILVSAIVTGEDDYSHL 161
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 119 (46.9 bits), Expect = 0.00061, P = 0.00061
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 572 KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPC 631
K +A +DI +G+R + F H +N V+ S + + S D+ +K+WD R+K
Sbjct: 120 KTLAFWDIATGQRQRRFKG-HGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKK--HAA 176
Query: 632 YTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
+T S VCF ++ +DNEV+
Sbjct: 177 HTLESPFQVTAVCFGDTGEQVISGGIDNEVK 207
>UNIPROTKB|B4HWV6 [details] [associations]
symbol:GM11446 "Ribosome biogenesis protein WDR12 homolog"
species:7238 "Drosophila sechellia" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH480818 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002036578.1
ProteinModelPortal:B4HWV6 EnsemblMetazoa:FBtr0194431 GeneID:6612061
KEGG:dse:Dsec_GM11446 FlyBase:FBgn0166389 Uniprot:B4HWV6
Length = 420
Score = 120 (47.3 bits), Expect = 0.00066, P = 0.00066
Identities = 61/250 (24%), Positives = 96/250 (38%)
Query: 421 TRSLCAAKVGSSAWPCLHTLTVSGNHMGDENRSFRPRQFEYHPSI--SCLMVFGT-LDGX 477
T L VGS+A C+ G+ G ++ S P + + L V+ LD
Sbjct: 171 TAMLWKWNVGSNAVDCVSVC--KGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAELDDG 228
Query: 478 XXXXXXXXXXXXSYIPSF---GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPS 534
P G SV + W+ + L+ GS + +LK++D+ S
Sbjct: 229 VEGSSKRMKESGVRTPKITLQGHRESVSAVQWMDA--TTLLTGSWDYTLKVWDL-----S 281
Query: 535 IRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYD--INSGRRLQVFADMH 592
+ G+ T FD S ++ L L + KN+ LYD N G ++ H
Sbjct: 282 LEGIKTEIST-NKSIFDASYS----KLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGH 336
Query: 593 KEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYL 652
+ V +S +F + ++D KLWD R P P Y V+ + Y+
Sbjct: 337 NAWVQTVMWSTTEEFLFVSGAYDNQNKLWDCRS-PKAPLYDLLGHGDKVLDIDWSNPKYI 395
Query: 653 LVSAVDNEVR 662
+ VDN VR
Sbjct: 396 VSGGVDNTVR 405
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 120 (47.3 bits), Expect = 0.00067, P = 0.00067
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI P G A V + V + +
Sbjct: 181 GLSWNSNLSGHLLSASDDHTVCLWDISAGPKE--GKVVDAKAVFTGHSAVVEDVAWHLLH 238
Query: 563 E-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D N+ + D H +N + F+ +S I AT S D+ V
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 299 LWDLRNLKLK-LHSFESHKDEIFQVHWSPHNETILASS 335
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 120 (47.3 bits), Expect = 0.00067, P = 0.00067
Identities = 41/158 (25%), Positives = 74/158 (46%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI +P G GA T+ + V + +
Sbjct: 182 GLSWNPYLSGYLLSASDDHTICLWDISAVPKE--GKVVGAKTIFTGHTAVVEDVSWHLLH 239
Query: 563 E-LFLASGYSKNIALYDINSGRRLQVF--ADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D S + D + +N + F+ +S I A+ S D+ V
Sbjct: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSPDKTVA 299
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 300 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|Q0VBY8 [details] [associations]
symbol:DDB2 "DNA damage-binding protein 2" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0006290 "pyrimidine dimer repair" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0009411
GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 GO:GO:0004842
GO:GO:0000209 GO:GO:0051865 KO:K10140 EMBL:BC120440 IPI:IPI00711494
RefSeq:NP_001069256.1 UniGene:Bt.33161 ProteinModelPortal:Q0VBY8
STRING:Q0VBY8 Ensembl:ENSBTAT00000027965 GeneID:519357
KEGG:bta:519357 CTD:1643 GeneTree:ENSGT00510000047881
HOGENOM:HOG000231440 HOVERGEN:HBG000713 InParanoid:Q0VBY8
OMA:NSAYFNP OrthoDB:EOG40K7ZV NextBio:20872865 GO:GO:0006290
Uniprot:Q0VBY8
Length = 426
Score = 120 (47.3 bits), Expect = 0.00068, P = 0.00068
Identities = 60/252 (23%), Positives = 106/252 (42%)
Query: 422 RSLCAAKVGSSAWPCLHT-LTVSGNHMGDENRSF--------RPRQFEYHPSISCLMVFG 472
R+L K+G++AWP L L S + R F R +HP+ + G
Sbjct: 70 RALHQHKLGTAAWPSLQQGLQQSFLNSLASYRIFQKAAPFDRRATSLAWHPTHPSTLAVG 129
Query: 473 TLDGXXXXXXXXXXXXXSYIPSFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMP 532
+ G ++I GA S+ G+ + ++ S G+ +L D +
Sbjct: 130 SKGGDILLWNFGIKDKPTFIKGIGAGGSITGMKFNPLNTNQFFTSSMEGTTRLQDFKGN- 188
Query: 533 PSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMH 592
++R A + T + + S+ V+ + + ++ L +++ GR L MH
Sbjct: 189 -TLRVF---ASSDTCNVW--FCSLDVSVKSRVVVTGDNVGHVILLNMD-GRELWNLR-MH 240
Query: 593 KEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDH 650
K+ + V + + AT+S DQ VK+WDLRQ + + S + + FSPD
Sbjct: 241 KKKVTHVALNPCCDWLLATASVDQTVKIWDLRQVRGKSSFLHSLPHRHPVNAAHFSPDGA 300
Query: 651 YLLVSAVDNEVR 662
LL + +E+R
Sbjct: 301 QLLTTDQKSEIR 312
>GENEDB_PFALCIPARUM|PFC0365w [details] [associations]
symbol:PFC0365w "conserved protein, putative"
species:5833 "Plasmodium falciparum" [GO:0016363 "nuclear matrix"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 130 (50.8 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 41/153 (26%), Positives = 77/153 (50%)
Query: 555 SVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSF 614
++H + M +F + NI +YDI S + + + H + +N + FS + + A+SS
Sbjct: 384 AIHPDGM--MFGIAAQDSNIHIYDIKS-QEYKATLNGHTKSLNCLSFSENGYYL-ASSSK 439
Query: 615 DQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLN 674
D VKLWDLR+ Q T + ++ + F YL + AV+N++ Q+ + + N
Sbjct: 440 DNTVKLWDLRKA--QSFQTITLNETPNFISFDYSGKYLSI-AVENDI-QIYNFETKNQAN 495
Query: 675 FGITATGSSQNYTRSYYLNGRDYIVSGSCDEHV 707
T + + T++ + + YI+S S D+ +
Sbjct: 496 LIKTLSSHTDIVTQTCFGSTTSYILSSSMDKTI 528
Score = 37 (18.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 393 REIKASQTRGKTSRHKTSYPSGM 415
+ IK S+ + +H +P GM
Sbjct: 368 KTIKTSKDNPSSFKHLAIHPDGM 390
>UNIPROTKB|O77325 [details] [associations]
symbol:PFC0365w "PRP19-like protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016363 "nuclear
matrix" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 130 (50.8 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 41/153 (26%), Positives = 77/153 (50%)
Query: 555 SVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSF 614
++H + M +F + NI +YDI S + + + H + +N + FS + + A+SS
Sbjct: 384 AIHPDGM--MFGIAAQDSNIHIYDIKS-QEYKATLNGHTKSLNCLSFSENGYYL-ASSSK 439
Query: 615 DQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLN 674
D VKLWDLR+ Q T + ++ + F YL + AV+N++ Q+ + + N
Sbjct: 440 DNTVKLWDLRKA--QSFQTITLNETPNFISFDYSGKYLSI-AVENDI-QIYNFETKNQAN 495
Query: 675 FGITATGSSQNYTRSYYLNGRDYIVSGSCDEHV 707
T + + T++ + + YI+S S D+ +
Sbjct: 496 LIKTLSSHTDIVTQTCFGSTTSYILSSSMDKTI 528
Score = 37 (18.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 393 REIKASQTRGKTSRHKTSYPSGM 415
+ IK S+ + +H +P GM
Sbjct: 368 KTIKTSKDNPSSFKHLAIHPDGM 390
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 119 (46.9 bits), Expect = 0.00070, P = 0.00070
Identities = 42/196 (21%), Positives = 89/196 (45%)
Query: 514 LIAGSDNGSLKLYDI--RHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYS 571
+++ SD+ +LK+++I M +++G H F + N L ++ +
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKG-H---NNYVF-------CCNFNPQSSLVVSGSFD 192
Query: 572 KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPC 631
+++ ++D+ +G ++ H + ++ V F N S+ A+ S+D V++WD
Sbjct: 193 ESVRIWDVKTGMCIKTLP-AHSDPVSAVSF-NRDGSLIASGSYDGLVRIWDTANGQCIKT 250
Query: 632 YTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATG-SSQNYT--R 688
+ V FSP+ Y+L S +D+ ++ G+ + TG + Y
Sbjct: 251 LVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQY----TGHENSKYCIFA 306
Query: 689 SYYLNGRDYIVSGSCD 704
++ + G +I+SGS D
Sbjct: 307 NFSVTGGKWIISGSED 322
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 119 (46.9 bits), Expect = 0.00070, P = 0.00070
Identities = 42/196 (21%), Positives = 89/196 (45%)
Query: 514 LIAGSDNGSLKLYDI--RHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYS 571
+++ SD+ +LK+++I M +++G H F + N L ++ +
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKG-H---NNYVF-------CCNFNPQSSLVVSGSFD 192
Query: 572 KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPC 631
+++ ++D+ +G ++ H + ++ V F N S+ A+ S+D V++WD
Sbjct: 193 ESVRIWDVKTGMCIKTLP-AHSDPVSAVSF-NRDGSLIASGSYDGLVRIWDTANGQCIKT 250
Query: 632 YTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATG-SSQNYT--R 688
+ V FSP+ Y+L S +D+ ++ G+ + TG + Y
Sbjct: 251 LVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQY----TGHENSKYCIFA 306
Query: 689 SYYLNGRDYIVSGSCD 704
++ + G +I+SGS D
Sbjct: 307 NFSVTGGKWIISGSED 322
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 120 (47.3 bits), Expect = 0.00074, P = 0.00074
Identities = 41/146 (28%), Positives = 70/146 (47%)
Query: 564 LFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDL 623
L ++ K I ++D + + + F+D N V F N S + A++ DQ VK+WD+
Sbjct: 158 LIVSCSEDKTIKIWDTTNKQCVNNFSDS-VGFANFVDF-NPSGTCIASAGSDQTVKVWDV 215
Query: 624 RQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITA-TGS 682
R + Y S N + F P D+YL+ ++ D ++ L ++GR L + + TG
Sbjct: 216 RVNKLLQHYQVHSGGVNC-ISFHPSDNYLVTASSDGTLKILDLLEGR--LIYTLQGHTGP 272
Query: 683 SQNYTRSYYLNGRDYIVSGSCDEHVV 708
+T S+ G + SG D V+
Sbjct: 273 V--FTVSFSKGG-ELFASGGADTQVL 295
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 117 (46.2 bits), Expect = 0.00077, P = 0.00077
Identities = 42/140 (30%), Positives = 67/140 (47%)
Query: 513 KLIAGSDNG-SLKLYDIRHMP--PSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASG 569
+LIA S + S++L+D+ ++G TV+F S D LASG
Sbjct: 81 RLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSF------------SPDSKQLASG 128
Query: 570 -YSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQK-P 627
+ K ++++ SGRR+ + H + I FS S S+ AT S+D V +WDLR P
Sbjct: 129 GWDKRAIVWEVQSGRRVHLLVG-HCDSIQSSDFSPTSDSL-ATGSWDSTVHIWDLRASTP 186
Query: 628 IQPCYTASSSKGNVM-VCFS 646
+ + GN+ +C+S
Sbjct: 187 VVSYHNLEGHTGNISCLCYS 206
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 119 (46.9 bits), Expect = 0.00086, P = 0.00086
Identities = 41/158 (25%), Positives = 72/158 (45%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI P G A + + V + +
Sbjct: 180 GLSWNSNLKGHLLSASDDHTVCLWDISAGPKE--GKIVDAKAIFTGHSAVVEDVAWHLLH 237
Query: 563 E-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D N+ + D H +N + F+ +S I AT S D+ V
Sbjct: 238 ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 297
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 298 LWDLRNLKLK-LHSFESHKDEIFQVHWSPHNETILASS 334
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 119 (46.9 bits), Expect = 0.00086, P = 0.00086
Identities = 41/158 (25%), Positives = 72/158 (45%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI P G A + + V + +
Sbjct: 181 GLSWNSNLSGHLLSASDDHTVCLWDISAGPKE--GKVVDAKAIFTGHSAVVEDVAWHLLH 238
Query: 563 E-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D N+ + D H +N + F+ +S I AT S D+ V
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 299 LWDLRNLKLK-LHSFESHKDEIFQVHWSPHNETILASS 335
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 119 (46.9 bits), Expect = 0.00088, P = 0.00088
Identities = 41/158 (25%), Positives = 73/158 (46%)
Query: 503 GLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMD 562
GL W L++ SD+ ++ L+DI P R + A + + V + +
Sbjct: 186 GLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVID--AKNIFTGHTAVVEDVAWHLLH 243
Query: 563 E-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
E LF + + + ++D N+ + D H +N + F+ +S I AT S D+ V
Sbjct: 244 ESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA 303
Query: 620 LWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 304 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 340
>UNIPROTKB|Q5ZJL7 [details] [associations]
symbol:DDB2 "DNA damage-binding protein 2" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0009411
GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 GO:GO:0004842 GO:GO:0000209
GO:GO:0051865 eggNOG:NOG266768 KO:K10140 CTD:1643
HOGENOM:HOG000231440 HOVERGEN:HBG000713 OrthoDB:EOG40K7ZV
GO:GO:0006290 EMBL:AJ720417 IPI:IPI00735080 RefSeq:NP_001034390.1
UniGene:Gga.21424 ProteinModelPortal:Q5ZJL7 STRING:Q5ZJL7
GeneID:423185 KEGG:gga:423185 InParanoid:Q5ZJL7 NextBio:20825687
ArrayExpress:Q5ZJL7 Uniprot:Q5ZJL7
Length = 507
Score = 120 (47.3 bits), Expect = 0.00088, P = 0.00088
Identities = 51/207 (24%), Positives = 81/207 (39%)
Query: 460 EYHPSISCLMVFGTLDGXXXXXXXXXXXXXSYIPSFGAMNSVLGLCWLKKYPS-KLIAGS 518
E+HP+ + G+ G +I G +S LG Y + KL S
Sbjct: 131 EWHPTHPSTVAVGSKGGDIILWDYEVLTKTCFIKGKGPGDS-LGDIKFSPYEAVKLYVAS 189
Query: 519 DNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYD 578
+G+L L D+ + G + SV V++ + N+ L
Sbjct: 190 GDGTLSLQDLEGRAVQVISRAPDCGHENHNVCCWYCSVDVSASCRAVVTGDNLGNVVLLS 249
Query: 579 INSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLR--QKPIQPCYTASS 636
SG + +HK+ + V+F++ + AT+S DQ VK+WDLR + +
Sbjct: 250 -TSGEEIWKLK-LHKKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKDKANFLHVLPH 307
Query: 637 SKGNVMVCFSPDDHYLLVSAVD-NEVR 662
K FSP D L+S NE+R
Sbjct: 308 DKPVNAAYFSPTDGAKLLSTDQRNEIR 334
>UNIPROTKB|F1NDS8 [details] [associations]
symbol:DDB2 "DNA damage-binding protein 2" species:9031
"Gallus gallus" [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009411 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0004842
GO:GO:0000209 GO:GO:0051865 GeneTree:ENSGT00510000047881
GO:GO:0006290 IPI:IPI00735080 EMBL:AADN02033477 EMBL:AADN02033478
Ensembl:ENSGALT00000013377 ArrayExpress:F1NDS8 Uniprot:F1NDS8
Length = 509
Score = 120 (47.3 bits), Expect = 0.00089, P = 0.00089
Identities = 51/207 (24%), Positives = 81/207 (39%)
Query: 460 EYHPSISCLMVFGTLDGXXXXXXXXXXXXXSYIPSFGAMNSVLGLCWLKKYPS-KLIAGS 518
E+HP+ + G+ G +I G +S LG Y + KL S
Sbjct: 131 EWHPTHPSTVAVGSKGGDIILWDYEVLTKTCFIKGKGPGDS-LGDIKFSPYEAVKLYVAS 189
Query: 519 DNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYD 578
+G+L L D+ + G + SV V++ + N+ L
Sbjct: 190 GDGTLSLQDLEGRAVQVISRAPDCGHENHNVCCWYCSVDVSASCRAVVTGDNLGNVVLLS 249
Query: 579 INSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLR--QKPIQPCYTASS 636
SG + +HK+ + V+F++ + AT+S DQ VK+WDLR + +
Sbjct: 250 -TSGEEIWKLK-LHKKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKDKANFLHVLPH 307
Query: 637 SKGNVMVCFSPDDHYLLVSAVD-NEVR 662
K FSP D L+S NE+R
Sbjct: 308 DKPVNAAYFSPTDGAKLLSTDQRNEIR 334
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 793 767 0.00092 121 3 11 22 0.37 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 119
No. of states in DFA: 624 (66 KB)
Total size of DFA: 413 KB (2199 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 62.17u 0.10s 62.27t Elapsed: 00:00:02
Total cpu time: 62.19u 0.10s 62.29t Elapsed: 00:00:02
Start: Thu May 9 21:26:37 2013 End: Thu May 9 21:26:39 2013
WARNINGS ISSUED: 1