BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003822
(793 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q92466|DDB2_HUMAN DNA damage-binding protein 2 OS=Homo sapiens GN=DDB2 PE=1 SV=1
Length = 427
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 20/252 (7%)
Query: 422 RSLCAAKVGSSAWPCLHT-LTVSGNHMGDENRSF--------RPRQFEYHPSISCLMVFG 472
R+L K+G ++WP + L S H D R R +HP+ + G
Sbjct: 71 RTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVG 130
Query: 473 TLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMP 532
+ G+I++ N ++ ++I GA S+ GL + ++ A S G+ +L D +
Sbjct: 131 SKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG-- 188
Query: 533 PSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMH 592
+I + + T+ S+ V++ + + N+ L +++ G+ L MH
Sbjct: 189 -NILRVFASSDTINI----WFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNL-RMH 241
Query: 593 KEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM--VCFSPDDH 650
K+ + V + AT+S DQ VK+WDLRQ + + S + + CFSPD
Sbjct: 242 KKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA 301
Query: 651 YLLVSAVDNEVR 662
LL + +E+R
Sbjct: 302 RLLTTDQKSEIR 313
>sp|Q66JG1|DDB2_XENTR DNA damage-binding protein 2 OS=Xenopus tropicalis GN=ddb2 PE=2
SV=1
Length = 501
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 13/213 (6%)
Query: 459 FEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAGS 518
E+HP+ + G+ G+I++ ++E N + IP GA + G+ + P++L S
Sbjct: 127 LEWHPTHPNTVAVGSKGGDIILWDYEELN-NTLIPGIGAGGCITGMKFDPFNPNQLYTSS 185
Query: 519 DNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYD 578
GS L D G + T T D S+ V++ + + N+ L +
Sbjct: 186 VAGSTVLQDFS-------GRNIQTFTNTEDWAMWYCSLDVSAERQCVVTGDNVGNVVLLE 238
Query: 579 INSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPC--YTASS 636
G+ + +HK+ + V+F+ + A++S DQ VKLWDLR + YT
Sbjct: 239 -TCGKEIWKLR-LHKKKVTHVEFNPRCDWLLASASVDQTVKLWDLRNIKDKSSYLYTLPH 296
Query: 637 SKGNVMVCFSP-DDHYLLVSAVDNEVRQLLAVD 668
++G FSP D LL + +E+R A D
Sbjct: 297 ARGVNSAYFSPWDGAKLLTTDQHSEIRVYSACD 329
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
+ S+ +++ +EL +A S +I ++D+ + + L+ HK +I + F + S A+
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLG-HKANICSLDFHPYG-SFVASG 123
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVRQLLAVDGR 670
S D D+KLWD+R+K C S + C FSPD +L +A D+ V+ G+
Sbjct: 124 SLDTDIKLWDVRRK---GCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 671 VHLNFGITATGSSQNYTRSYYLNGRDYIVSGSCDEHV 707
V F TG S + + SGS D +
Sbjct: 181 VMFEF----TGHSGPVNVVEFHPSEYLLASGSSDRTI 213
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASG-YSK 572
++AGS +GS++++D+ + + A + D F S F+ASG
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLD-FHPYGS---------FVASGSLDT 127
Query: 573 NIALYDINSGRRLQVFADMHKEHINVVKFSNHSP--SIFATSSFDQDVKLWDLRQKPIQP 630
+I L+D+ R+ +F +K H V+ SP A+++ D VKLWDL +
Sbjct: 128 DIKLWDVR--RKGCIFK--YKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMF 183
Query: 631 CYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
+T S NV V F P ++ L + D +R
Sbjct: 184 EFTGHSGPVNV-VEFHPSEYLLASGSSDRTIR 214
>sp|Q99J79|DDB2_MOUSE DNA damage-binding protein 2 OS=Mus musculus GN=Ddb2 PE=1 SV=1
Length = 432
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 11/210 (5%)
Query: 455 RPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKL 514
R +HP+ + G+ G+I++ N ++ ++ GA S+ GL + ++
Sbjct: 113 RTTSLAWHPTHPSTLAVGSKGGDIMIWNFGIKDKPIFLKGIGAGGSITGLKFNHLNTNQF 172
Query: 515 IAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNI 574
A S G+ +L D + +I ++ + + S+ V++ + + ++
Sbjct: 173 FASSMEGTTRLQDFKG---NILRVYTSSNSCKV----WFCSLDVSAKSRVVVTGDNMGHV 225
Query: 575 ALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTA 634
L + G+ L MHK+ + V + + AT+S DQ VK+WDLRQ + +
Sbjct: 226 ILLSTD-GKELWNLR-MHKKKVAHVALNPCCDWLLATASIDQTVKIWDLRQIKGKDSFLY 283
Query: 635 SSSKGNVM--VCFSPDDHYLLVSAVDNEVR 662
S + + CFSPD LL + +NE+R
Sbjct: 284 SLPHRHPVNAACFSPDGARLLTTDQNNEIR 313
>sp|Q9D7H2|WDR5B_MOUSE WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1
Length = 328
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 98/202 (48%), Gaps = 24/202 (11%)
Query: 512 SKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYS 571
S+L++ SD+ +LK++D+R S + + G F + N L ++ +
Sbjct: 94 SRLVSASDDKTLKVWDMR----SGKCLKTLKGHSDF-----VFCCDFNPPSNLIVSGSFD 144
Query: 572 KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPC 631
+++ ++++ +G+ L+ + H + I+ V F N + S+ + S+D ++WD C
Sbjct: 145 ESVKIWEVKTGKCLKTLS-AHSDPISAVNF-NCNGSLIVSGSYDGLCRIWDAAS---GQC 199
Query: 632 YTASSSKGN---VMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATG-SSQNYT 687
+ +GN V FSP+ Y+L + +DN ++ GR + TG ++ Y
Sbjct: 200 LRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTY----TGHKNEKYC 255
Query: 688 --RSYYLNGRDYIVSGSCDEHV 707
S+ + GR ++VSGS D V
Sbjct: 256 LFASFSVTGRKWVVSGSEDNMV 277
>sp|Q0VBY8|DDB2_BOVIN DNA damage-binding protein 2 OS=Bos taurus GN=DDB2 PE=2 SV=1
Length = 426
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 28/256 (10%)
Query: 422 RSLCAAKVGSSAWPCLHTL-------TVSGNHMGDENRSF--RPRQFEYHPSISCLMVFG 472
R+L K+G++AWP L +++ + + F R +HP+ + G
Sbjct: 70 RALHQHKLGTAAWPSLQQGLQQSFLNSLASYRIFQKAAPFDRRATSLAWHPTHPSTLAVG 129
Query: 473 TLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMP 532
+ G+I++ N ++ ++I GA S+ G+ + ++ S G+ +L D +
Sbjct: 130 SKGGDILLWNFGIKDKPTFIKGIGAGGSITGMKFNPLNTNQFFTSSMEGTTRLQDFK--- 186
Query: 533 PSIRGMHYGAGTVTFDEFDQ----LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVF 588
G F D S+ V+ + + ++ L +++ GR L
Sbjct: 187 --------GNTLRVFASSDTCNVWFCSLDVSVKSRVVVTGDNVGHVILLNMD-GRELWNL 237
Query: 589 ADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM--VCFS 646
MHK+ + V + + AT+S DQ VK+WDLRQ + + S + + FS
Sbjct: 238 -RMHKKKVTHVALNPCCDWLLATASVDQTVKIWDLRQVRGKSSFLHSLPHRHPVNAAHFS 296
Query: 647 PDDHYLLVSAVDNEVR 662
PD LL + +E+R
Sbjct: 297 PDGAQLLTTDQKSEIR 312
>sp|Q5BJQ6|CSTF1_RAT Cleavage stimulation factor subunit 1 OS=Rattus norvegicus GN=Cstf1
PE=2 SV=1
Length = 431
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN 573
L +GS + +LKL+D P + R Y E + L S+ + + L
Sbjct: 188 LASGSRDYTLKLFDYSK-PSAKRAFKY------IQEAEMLRSISFHPSGDFILVGTQHPT 240
Query: 574 IALYDINSGRRLQVFA-----DMHKEHINVVKFSNHSPSIFATSSFDQDVKLWD-LRQKP 627
+ LYDIN+ Q F D H + I V + N S +++ T S D +KLWD + +
Sbjct: 241 LRLYDINT---FQCFVSCNPQDQHTDAICSVNY-NPSANMYVTGSKDGCIKLWDGVSNRC 296
Query: 628 IQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNF-GITATGSSQNY 686
I A FS + Y+L S D+ + GR + + G +G +
Sbjct: 297 ITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHR 356
Query: 687 TRSYYLNGRDYIVSGSCDEHVVRICC--AQTGRRLRDISL 724
T++ + + DYI+ DE + +CC ++T R +SL
Sbjct: 357 TQAVFNHTEDYILLP--DERTISLCCWDSRTAERRNLLSL 394
>sp|Q99LC2|CSTF1_MOUSE Cleavage stimulation factor subunit 1 OS=Mus musculus GN=Cstf1 PE=2
SV=1
Length = 431
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN 573
L +GS + +LKL+D P + R Y E + L S+ + + L
Sbjct: 188 LASGSRDYTLKLFDYSK-PSAKRAFKY------IQEAEMLRSISFHPSGDFILVGTQHPT 240
Query: 574 IALYDINSGRRLQVFA-----DMHKEHINVVKFSNHSPSIFATSSFDQDVKLWD-LRQKP 627
+ LYDIN+ Q F D H + I V + N S +++ T S D +KLWD + +
Sbjct: 241 LRLYDINT---FQCFVSCNPQDQHTDAICSVNY-NPSANMYVTGSKDGCIKLWDGVSNRC 296
Query: 628 IQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNF-GITATGSSQNY 686
I A FS + Y+L S D+ + GR + + G +G +
Sbjct: 297 ITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHR 356
Query: 687 TRSYYLNGRDYIVSGSCDEHVVRICC--AQTGRRLRDISL 724
T++ + + DYI+ DE + +CC ++T R +SL
Sbjct: 357 TQAVFNHTEDYILLP--DERTISLCCWDSRTAERRNLLSL 394
>sp|Q05048|CSTF1_HUMAN Cleavage stimulation factor subunit 1 OS=Homo sapiens GN=CSTF1 PE=1
SV=1
Length = 431
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN 573
L +GS + +LKL+D P + R Y E + L S+ + + L
Sbjct: 188 LASGSRDYTLKLFDYSK-PSAKRAFKY------IQEAEMLRSISFHPSGDFILVGTQHPT 240
Query: 574 IALYDINSGRRLQVFA-----DMHKEHINVVKFSNHSPSIFATSSFDQDVKLWD-LRQKP 627
+ LYDIN+ Q F D H + I V + N S +++ T S D +KLWD + +
Sbjct: 241 LRLYDINT---FQCFVSCNPQDQHTDAICSVNY-NSSANMYVTGSKDGCIKLWDGVSNRC 296
Query: 628 IQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNF-GITATGSSQNY 686
I A FS + Y+L S D+ + GR + + G +G +
Sbjct: 297 ITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHR 356
Query: 687 TRSYYLNGRDYIVSGSCDEHVVRICC--AQTGRRLRDISL 724
T++ + + DY++ DE + +CC ++T R +SL
Sbjct: 357 TQAVFNHTEDYVLLP--DERTISLCCWDSRTAERRNLLSL 394
>sp|Q0P593|WDR69_BOVIN Outer row dynein assembly protein 16 homolog OS=Bos taurus GN=WDR69
PE=2 SV=1
Length = 415
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 11/169 (6%)
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
LT+V +N F+ Y + L+D SG L + H+ + + F+N AT
Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTL-EGHRNVVYAIAFNNPYGDKIATG 153
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVRQLLAVDGR 670
SFD+ KLW + CY +VC F+P + ++D + G
Sbjct: 154 SFDKTCKLWSVETG---KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGE 210
Query: 671 VHLNFGITATGSSQNYTRSYYLNGRDYIVSGSCDEHVVRICCAQTGRRL 719
T TG S + + I++GS D H V + A TGR++
Sbjct: 211 EVF----TLTGHSAEIISLSFNTSGNRIITGSFD-HTVTVWEADTGRKV 254
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 19/171 (11%)
Query: 555 SVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSF 614
SV NS +EL +A S + +YD+ + ++ H+ I + F A+ S
Sbjct: 64 SVKFNSSEELVVAGSQSGTMKIYDLEPAKIVRTLTG-HRNSIRCMDFHPFG-EFVASGST 121
Query: 615 DQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLN 674
D +VKLWD+R+K Y S + N M+ FSPD +L+ ++ D ++ G++
Sbjct: 122 DTNVKLWDVRRKGCIYTYKGHSDQVN-MIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQE 180
Query: 675 F-----GIT-----------ATGSSQNYTRSYYLNGRDYIVSGSCDEHVVR 709
F G+T A+GSS + + L + S S VR
Sbjct: 181 FKNHTGGVTGIEFHPNEFLLASGSSDRTVQFWDLETFQLVSSTSPGASAVR 231
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 28/184 (15%)
Query: 452 RSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLK--- 508
R+++ ++ H S + G + G ++V E++ + + + G N ++ L
Sbjct: 5 RAWKLQELVAHSSNVNCLALGPMSGRVMVTGGEDKKVNLW--AVGKQNCIISLSGHTSPV 62
Query: 509 ---KYPSK---LIAGSDNGSLKLYDIR--HMPPSIRGMHYGAGTVTFDEFDQLTSVHVNS 560
K+ S ++AGS +G++K+YD+ + ++ G + F F +
Sbjct: 63 DSVKFNSSEELVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGE-------- 114
Query: 561 MDELFLASGYS-KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
F+ASG + N+ L+D+ + + H + +N++KFS T+S D +K
Sbjct: 115 ----FVASGSTDTNVKLWDVRRKGCIYTYKG-HSDQVNMIKFSPDG-KWLVTASEDTTIK 168
Query: 620 LWDL 623
LWDL
Sbjct: 169 LWDL 172
>sp|Q5R8K2|CSTF1_PONAB Cleavage stimulation factor subunit 1 OS=Pongo abelii GN=CSTF1 PE=2
SV=1
Length = 431
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN 573
L +GS + +LKL+D P + R Y E + L S+ + + L
Sbjct: 188 LASGSRDYTLKLFDYSK-PSAKRAFKY------IQEAEMLRSISFHPSGDFILVGTQHPT 240
Query: 574 IALYDINSGRRLQVFA-----DMHKEHINVVKFSNHSPSIFATSSFDQDVKLWD-LRQKP 627
+ LYDIN+ Q F D H + I V + N S +++ T S D +KLWD + +
Sbjct: 241 LRLYDINT---FQCFVSCNPQDQHADAICSVNY-NSSANMYVTGSKDGCIKLWDGVSNRC 296
Query: 628 IQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNF-GITATGSSQNY 686
I A FS + Y+L S D+ + GR + + G +G +
Sbjct: 297 ITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHR 356
Query: 687 TRSYYLNGRDYIVSGSCDEHVVRICC 712
T++ + + DY++ DE + +CC
Sbjct: 357 TQAVFNHTEDYVLLP--DERTISLCC 380
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 512 SKLI-AGSDNGSLKLYDIR--HMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLAS 568
SKLI + SD+ ++K++D+ M +++G + + V N L ++
Sbjct: 100 SKLICSASDDKTIKIWDVESGKMVKTLKGHK-----------EYVFGVSFNPQSNLIVSG 148
Query: 569 GYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPI 628
+ +N+ ++D+N+G ++ + H + + V F N ++ + S+D V++WD +
Sbjct: 149 SFDENVRIWDVNTGECTKMIS-AHSDPVTGVHF-NRDGTLVVSGSYDGTVRIWDTTTGQL 206
Query: 629 QPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
+ K V FSP+ ++L +DN +R
Sbjct: 207 LNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLR 240
>sp|Q4V8C4|WDR5B_RAT WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2
SV=1
Length = 328
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 24/202 (11%)
Query: 512 SKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYS 571
S+L++ SD+ +LKL+D+R S + + G F + N L ++ +
Sbjct: 94 SRLVSASDDKTLKLWDVR----SGKCLKTLKGHSDF-----VFCCDFNPPSNLIVSGSFD 144
Query: 572 KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPC 631
+++ ++++ +G+ L+ + H + I+ V F + S+ + S+D ++WD C
Sbjct: 145 ESVKIWEVKTGKCLKTLS-AHSDPISAVHFHCNG-SLIVSGSYDGLCRIWDAAS---GQC 199
Query: 632 YTASSSKGN---VMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATG-SSQNYT 687
+ +GN V FSP+ Y+L + +D+ ++ GR + TG ++ Y
Sbjct: 200 LRTLADEGNPPVSFVKFSPNGKYILTATLDSTLKLWDYSRGRCLKTY----TGHKNEKYC 255
Query: 688 --RSYYLNGRDYIVSGSCDEHV 707
S+ + GR ++VSGS D V
Sbjct: 256 IFASFSVTGRKWVVSGSEDNMV 277
>sp|Q8N136|WDR69_HUMAN Outer row dynein assembly protein 16 homolog OS=Homo sapiens
GN=WDR69 PE=1 SV=1
Length = 415
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 11/169 (6%)
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
LT+V +N F+ Y + L+D SG L + H+ + + F+N AT
Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTL-EGHRNVVYAIAFNNPYGDKIATG 153
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVRQLLAVDGR 670
SFD+ KLW + CY +VC F+P + ++D + +G
Sbjct: 154 SFDKTCKLWSVETG---KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGE 210
Query: 671 VHLNFGITATGSSQNYTRSYYLNGRDYIVSGSCDEHVVRICCAQTGRRL 719
T G S + D I++GS D H V + A TGR++
Sbjct: 211 EVY----TLRGHSAEIISLSFNTSGDRIITGSFD-HTVVVWDADTGRKV 254
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 23/219 (10%)
Query: 453 SFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSY-------IPSFGAMNSVLGLC 505
S++ ++ H S +V G G ++ E+ + + I S S +G
Sbjct: 10 SWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCI 69
Query: 506 WLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELF 565
+++AGS +GSL+L+D+ M + A ++S+ + M E
Sbjct: 70 QFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKA---------SISSLDFHPMGEYL 120
Query: 566 LASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSP--SIFATSSFDQDVKLWDL 623
+ NI L+D+ R+ VF +K H V+ SP A++S D VKLWDL
Sbjct: 121 ASGSVDSNIKLWDVR--RKGCVF--RYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDL 176
Query: 624 RQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
+ +T+ +S NV V F P+++ L + D V+
Sbjct: 177 IAGKMITEFTSHTSAVNV-VQFHPNEYLLASGSADRTVK 214
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 23/172 (13%)
Query: 556 VHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFD 615
+ NS +E +A S ++ L+D+ + + L+ HK I+ + F A+ S D
Sbjct: 69 IQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMG-HKASISSLDFHPMG-EYLASGSVD 126
Query: 616 QDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVRQLLAVDGRV-- 671
++KLWD+R+K C + C FSPD +L ++ D+ V+ + G++
Sbjct: 127 SNIKLWDVRRK---GCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMIT 183
Query: 672 --------------HLNFGITATGSSQNYTRSYYLNGRDYIVSGSCDEHVVR 709
H N + A+GS+ + + L + I S + VVR
Sbjct: 184 EFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVR 235
>sp|O74340|DCA13_SCHPO Protein sof1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sof1 PE=3 SV=1
Length = 436
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 458 QFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAG 517
+F Y + + ++ +D IV+ + + ++ + + NS+ W +AG
Sbjct: 194 KFNY--TETSVLASAGMDRSIVIYDLRTSSPLTKLITKLRTNSI---SWNPMEAFNFVAG 248
Query: 518 SDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALY 577
S++ +L +YD+R++ R +H V D + SV + + F++ Y K I +Y
Sbjct: 249 SEDHNLYMYDMRNLK---RALH-----VYKDHVSAVMSVDFSPTGQEFVSGSYDKTIRIY 300
Query: 578 DINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLR 624
++ G V+ + + VKFS + IF+ S D +V+LW R
Sbjct: 301 NVREGHSRDVYHTKRMQRVTAVKFSMDAQYIFSGSD-DSNVRLWRAR 346
>sp|Q86VZ2|WDR5B_HUMAN WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1
Length = 330
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 102/214 (47%), Gaps = 19/214 (8%)
Query: 512 SKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYS 571
S+L++ SD+ +LKL+D+R S + + G + + + N L ++ +
Sbjct: 96 SRLVSASDDKTLKLWDVR----SGKCLKTLKGHSNY-----VFCCNFNPPSNLIISGSFD 146
Query: 572 KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPC 631
+ + ++++ +G+ L+ + H + ++ V F N S S+ + S+D ++WD
Sbjct: 147 ETVKIWEVKTGKCLKTLS-AHSDPVSAVHF-NCSGSLIVSGSYDGLCRIWDAASGQCLKT 204
Query: 632 YTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATG-SSQNYT--R 688
+ V FSP+ Y+L + +DN ++ GR + TG ++ Y
Sbjct: 205 LVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTY----TGHKNEKYCIFA 260
Query: 689 SYYLNGRDYIVSGSCDEHVVRICCAQTGRRLRDI 722
++ + G +IVSGS ++++V I QT ++ +
Sbjct: 261 NFSVTGGKWIVSGS-EDNLVYIWNLQTKEIVQKL 293
>sp|O76734|TUP1_DICDI General transcriptional corepressor tupA OS=Dictyostelium
discoideum GN=tupA PE=2 SV=1
Length = 579
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 560 SMDELFLASGYSKNIALYDINSGRRLQVFADMHKE----HINVVKFSNHSPSIFATSSFD 615
S D +LA+G +++ +YD+++G+++ F D ++ +I V FS + AT + D
Sbjct: 290 SNDGKYLATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDG-NYLATGAED 348
Query: 616 QDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPD---DHYLLVSAVDNEVRQLLAVD-GRV 671
+ VK+WD+ K IQ + G+ + +S D D +VS ++ ++ ++ G+
Sbjct: 349 KTVKVWDIHTKKIQHTFY-----GHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKC 403
Query: 672 HLNFGITATGSSQNYTR-SYYLNGRDYIVSGSCDEHVVRICCAQTG 716
G G T + +GR + +GS D ++VR+ AQTG
Sbjct: 404 AFTLGNEEVGPKNGVTSVAMSPDGR-LVAAGSLD-NIVRLWDAQTG 447
>sp|Q5BK30|WDR69_RAT Outer row dynein assembly protein 16 homolog OS=Rattus norvegicus
GN=Wdr69 PE=2 SV=1
Length = 415
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 11/172 (6%)
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
LT+V +N F+ Y + ++D SG L + H+ + + F+N AT
Sbjct: 95 LTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTL-EGHRNVVYAIAFNNPYGDKIATG 153
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVRQLLAVDGR 670
SFD+ KLW CY +VC F+P + ++D + G
Sbjct: 154 SFDKTCKLW---SAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGE 210
Query: 671 VHLNFGITATGSSQNYTRSYYLNGRDYIVSGSCDEHVVRICCAQTGRRLRDI 722
+T TG + D I++GS D H V + A TGR++ +
Sbjct: 211 EV----VTLTGHLAEIISLSFDTSGDRIITGSFD-HTVVVWDASTGRKVHTL 257
>sp|P40066|GLE2_YEAST Nucleoporin GLE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GLE2 PE=1 SV=1
Length = 365
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 516 AGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN-I 574
A S +G ++++D+++ P R H + V + S D +ASG N +
Sbjct: 54 ASSWDGKVRIWDVQNGVPQGRAQHESSSPVLCTRW---------SNDGTKVASGGCDNAL 104
Query: 575 ALYDINSGRRLQVFADMHKEHINVVKFSNHSPS---IFATSSFDQDVKLWDLRQKPIQPC 631
LYDI SG+ Q+ MH I V++F PS T S+D+ +K WD+RQ QP
Sbjct: 105 KLYDIASGQTQQI--GMHSAPIKVLRFVQCGPSNTECIVTGSWDKTIKYWDMRQP--QPV 160
Query: 632 YT 633
T
Sbjct: 161 ST 162
>sp|Q5RE95|WDR5B_PONAB WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1
Length = 330
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 512 SKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYS 571
S+L++ SD+ +LKL+D+R S + + G + + + N L ++ +
Sbjct: 96 SRLVSASDDKTLKLWDMR----SGKCLKTLKGHSNY-----VFCCNFNPPSNLIISGSFD 146
Query: 572 KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPC 631
+ + ++++ +G+ L+ + H + ++ V F N S S+ + S+D ++WD
Sbjct: 147 ETVKIWEVKTGKCLKTLS-AHSDPVSAVHF-NCSGSLIVSGSYDGLCRIWDAASGQCLKT 204
Query: 632 YTASSSKGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATG-SSQNYT--R 688
+ V FSP+ Y+L + +DN ++ GR + TG ++ Y
Sbjct: 205 LVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTY----TGHKNEKYCIFA 260
Query: 689 SYYLNGRDYIVSGSCDEHVVRICCAQT 715
++ + G +IVSGS ++++V I QT
Sbjct: 261 NFSVTGGKWIVSGS-EDNLVYIWNLQT 286
>sp|Q9XF57|PEX7_ARATH Peroxisome biogenesis protein 7 OS=Arabidopsis thaliana GN=PEX7
PE=1 SV=2
Length = 317
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 494 SFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPS--IRGMHYGAGTVTFDEFD 551
S+ ++V +CW + + S LIA +GS+K+YD PPS IR A V +++
Sbjct: 56 SYDTADAVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYN 115
Query: 552 QLTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPS---I 608
+ + FL S + + L+ ++ ++ F KEH V + +P +
Sbjct: 116 P-------TRRDSFLTSSWDDTVKLWAMDRPASVRTF----KEHAYCVYQAVWNPKHGDV 164
Query: 609 FATSSFDQDVKLWDLRQ 625
FA++S D +++WD+R+
Sbjct: 165 FASASGDCTLRIWDVRE 181
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 12/124 (9%)
Query: 501 VLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFD-QLTSVHVN 559
V W K+ + S + +L+++D+R T+ D ++ S N
Sbjct: 152 VYQAVWNPKHGDVFASASGDCTLRIWDVRE----------PGSTMIIPAHDFEILSCDWN 201
Query: 560 SMDELFLA-SGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDV 618
D+ LA S K + ++D+ S R + H + VKFS H S+ A+ S+D V
Sbjct: 202 KYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSV 261
Query: 619 KLWD 622
LWD
Sbjct: 262 CLWD 265
>sp|Q6P3H7|RBBP4_DANRE Histone-binding protein RBBP4 OS=Danio rerio GN=rbbp4 PE=2 SV=3
Length = 424
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 23/230 (10%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---- 495
+ + NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 117 IEIKINHEGEVNRA------RYMPQNPCIIATKTPTSDVLVFDY-TKHPSKPDPSGECTP 169
Query: 496 -----GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF 550
G GL W S L++ SD+ ++ L+DI +P G A T+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLRSCLLSASDDHTICLWDISTVPK--EGKIVDAKTIFTGHT 227
Query: 551 DQLTSVHVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPS 607
+ V + + E LF + + + ++D N+ + D H +N + F+ +S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEF 287
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
I AT S D+ V LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 288 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
Score = 42.0 bits (97), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|Q5M7K4|RBBP4_XENTR Histone-binding protein RBBP4 OS=Xenopus tropicalis GN=rbbp4 PE=2
SV=3
Length = 425
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 23/230 (10%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---- 495
+ + NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 117 IEIKINHEGEVNRA------RYMPQNPCIIATKTPSSDVLVFDY-TKHPSKPDPSGECNP 169
Query: 496 -----GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI +P G A T+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPK--EGKVVDAKTIFTGHT 227
Query: 551 DQLTSVHVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPS 607
+ V + + E LF + + + ++D N+ + D H +N + F+ +S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
I AT S D+ V LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 288 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
Score = 41.6 bits (96), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|Q9W7I5|RBBP4_CHICK Histone-binding protein RBBP4 OS=Gallus gallus GN=RBBP4 PE=1 SV=3
Length = 425
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 23/230 (10%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---- 495
+ + NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 117 IEIKINHEGEVNRA------RYMPQNPCIIATKTPSSDVLVFDY-TKHPSKPDPSGECNP 169
Query: 496 -----GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI +P G A T+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK--EGKVVDAKTIFTGHT 227
Query: 551 DQLTSVHVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPS 607
+ V + + E LF + + + ++D N+ + D H +N + F+ +S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
I AT S D+ V LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 288 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
Score = 41.2 bits (95), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|Q5RF92|RBBP4_PONAB Histone-binding protein RBBP4 OS=Pongo abelii GN=RBBP4 PE=2 SV=3
Length = 425
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 23/230 (10%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---- 495
+ + NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 117 IEIKINHEGEVNRA------RYMPQNPCIIATKTPSSDVLVFDY-TKHPSKPDPSGECNP 169
Query: 496 -----GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI +P G A T+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK--EGKVVDAKTIFTGHT 227
Query: 551 DQLTSVHVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPS 607
+ V + + E LF + + + ++D N+ + D H +N + F+ +S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
I AT S D+ V LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 288 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
Score = 41.6 bits (96), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|Q5ZJL7|DDB2_CHICK DNA damage-binding protein 2 OS=Gallus gallus GN=DDB2 PE=2 SV=1
Length = 507
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 88/219 (40%), Gaps = 29/219 (13%)
Query: 459 FEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAGS 518
E+HP+ + G+ G+I++ ++E +I G +S+ + + KL S
Sbjct: 130 LEWHPTHPSTVAVGSKGGDIILWDYEVLTKTCFIKGKGPGDSLGDIKFSPYEAVKLYVAS 189
Query: 519 DNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYD 578
+G+L L D+ + G + SV V++ + N+ L
Sbjct: 190 GDGTLSLQDLEGRAVQVISRAPDCGHENHNVCCWYCSVDVSASCRAVVTGDNLGNVVLLS 249
Query: 579 INSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQ------------- 625
SG + +HK+ + V+F++ + AT+S DQ VK+WDLR
Sbjct: 250 -TSGEEIWKL-KLHKKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKDKANFLHVLPH 307
Query: 626 -KPIQPCYTASSSKGNVMVCFSPDDHYLLVSA-VDNEVR 662
KP+ Y FSP D L+S NE+R
Sbjct: 308 DKPVNAAY------------FSPTDGAKLLSTDQRNEIR 334
>sp|Q60972|RBBP4_MOUSE Histone-binding protein RBBP4 OS=Mus musculus GN=Rbbp4 PE=1 SV=5
Length = 425
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 23/230 (10%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---- 495
+ + NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 117 IEIKINHEGEVNRA------RYMPQNPCIIATKTPSSDVLVFDY-TKHPSKPDPSGECNP 169
Query: 496 -----GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI +P G A T+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK--EGKVVDAKTIFTGHT 227
Query: 551 DQLTSVHVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPS 607
+ V + + E LF + + + ++D N+ + D H +N + F+ +S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
I AT S D+ V LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 288 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
Score = 41.6 bits (96), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|Q09028|RBBP4_HUMAN Histone-binding protein RBBP4 OS=Homo sapiens GN=RBBP4 PE=1 SV=3
Length = 425
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 23/230 (10%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---- 495
+ + NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 117 IEIKINHEGEVNRA------RYMPQNPCIIATKTPSSDVLVFDY-TKHPSKPDPSGECNP 169
Query: 496 -----GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI +P G A T+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK--EGKVVDAKTIFTGHT 227
Query: 551 DQLTSVHVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPS 607
+ V + + E LF + + + ++D N+ + D H +N + F+ +S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
I AT S D+ V LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 288 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
Score = 41.6 bits (96), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|Q3MHL3|RBBP4_BOVIN Histone-binding protein RBBP4 OS=Bos taurus GN=RBBP4 PE=1 SV=3
Length = 425
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 23/230 (10%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---- 495
+ + NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 117 IEIKINHEGEVNRA------RYMPQNPCIIATKTPSSDVLVFDY-TKHPSKPDPSGECNP 169
Query: 496 -----GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI +P G A T+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK--EGKVVDAKTIFTGHT 227
Query: 551 DQLTSVHVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPS 607
+ V + + E LF + + + ++D N+ + D H +N + F+ +S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
I AT S D+ V LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 288 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
Score = 41.6 bits (96), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 13/158 (8%)
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
+ SV +N+ +EL +A S +I ++D+ + + L+ HK +I + F + A+
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMG-HKANICSLDFHPYG-EFVASG 123
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVRQLLAVDGR 670
S D ++KLWD+R+K C + C FSPD +L +A D+ V+ G+
Sbjct: 124 SQDTNIKLWDIRRK---GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 671 VHLNF-GITATGSSQNYTRSYYLNGRDYIVSGSCDEHV 707
+ F G T + + + YL + SGS D +
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYL-----LASGSSDRTI 213
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 468 LMVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYP-SKLIA-GSDNGSLKL 525
L+V G+ G I V + E I+ + M +C L +P + +A GS + ++KL
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTL-----MGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 526 YDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN-IALYDINSGRR 584
+DIR +G + + Q S D +LAS + + L+D+ +G+
Sbjct: 132 WDIRR-----KGCVF-----RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 585 LQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-V 643
+ F H +NVV+F + + A+ S D+ ++ WDL + + C G V V
Sbjct: 182 MSEFPG-HTGPVNVVEFHPNE-YLLASGSSDRTIRFWDLEKFQVVSCI--EGEPGPVRSV 237
Query: 644 CFSPD 648
F+PD
Sbjct: 238 LFNPD 242
Score = 41.2 bits (95), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
Query: 514 LIAGSDNGSLKLYDIR--HMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASG-Y 570
++AGS +GS++++D+ + ++ G ++ F + + F+ASG
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE------------FVASGSQ 125
Query: 571 SKNIALYDINSGRRLQVFA-DMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQ 629
NI L+DI R+ VF H + + ++FS A+++ D VKLWDL +
Sbjct: 126 DTNIKLWDIR--RKGCVFRYRGHSQAVRCLRFSPDG-KWLASAADDHTVKLWDLTAGKMM 182
Query: 630 PCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
+ + NV V F P+++ L + D +R
Sbjct: 183 SEFPGHTGPVNV-VEFHPNEYLLASGSSDRTIR 214
>sp|Q17BB0|WDR12_AEDAE Ribosome biogenesis protein WDR12 homolog OS=Aedes aegypti
GN=AAEL005041 PE=3 SV=1
Length = 427
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G + G+ W+ + L+ S + ++K++D+ ++ G+ + F L+
Sbjct: 260 GHRECISGVQWIDD--NTLVTSSWDHTIKIWDL-----ALSGIK--SEICGHKSFFDLSY 310
Query: 556 VHVNSMDELFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
H+N L +A+ KN+ LYD N G ++ H + + V++S + +F + +
Sbjct: 311 SHLNG---LIIAASPDKNLRLYDPKSNQGTIVKNTYLGHTQWVQSVRWSTTNEYLFVSGA 367
Query: 614 FDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
+D VKLWD R P P + + V+ C + ++L DN VR
Sbjct: 368 YDNHVKLWDYRS-PKAPIFELIGHEDKVLACDWSNPKFILSGGSDNSVR 415
>sp|Q6INH0|RBP4B_XENLA Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-b PE=1
SV=3
Length = 425
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 23/230 (10%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---- 495
+ + NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 117 IEIKINHEGEVNRA------RYMPQNPCIIATKTPSCDVLVFDY-TKHPSKPDPSGECNP 169
Query: 496 -----GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI +P G A T+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPK--EGKVVDAKTIFTGHT 227
Query: 551 DQLTSVHVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPS 607
+ V + + E LF + + + ++D N+ + D H +N + F+ +S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSA 656
I AT S D+ V LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 288 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS 336
Score = 41.6 bits (96), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 13/158 (8%)
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
+ SV +N+ +EL +A S +I ++D+ + + L+ HK +I + F + A+
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMG-HKANICSLDFHPYG-EFVASG 123
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVRQLLAVDGR 670
S D ++KLWD+R+K C + C FSPD +L +A D+ V+ G+
Sbjct: 124 SQDTNIKLWDIRRK---GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 671 VHLNF-GITATGSSQNYTRSYYLNGRDYIVSGSCDEHV 707
+ F G T + + + YL + SGS D +
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYL-----LASGSSDRTI 213
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 468 LMVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYP-SKLIA-GSDNGSLKL 525
L+V G+ G I V + E I+ + M +C L +P + +A GS + ++KL
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTL-----MGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 526 YDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN-IALYDINSGRR 584
+DIR +G + + Q S D +LAS + + L+D+ +G+
Sbjct: 132 WDIRR-----KGCVF-----RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 585 LQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-V 643
+ F H +NVV+F + + A+ S D+ ++ WDL + + C G V V
Sbjct: 182 MSEFPG-HTGPVNVVEFHPNE-YLLASGSSDRTIRFWDLEKFQVVSCIEGEP--GPVRSV 237
Query: 644 CFSPD 648
F+PD
Sbjct: 238 LFNPD 242
Score = 41.2 bits (95), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
Query: 514 LIAGSDNGSLKLYDIR--HMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASG-Y 570
++AGS +GS++++D+ + ++ G ++ F + + F+ASG
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE------------FVASGSQ 125
Query: 571 SKNIALYDINSGRRLQVFA-DMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQ 629
NI L+DI R+ VF H + + ++FS A+++ D VKLWDL +
Sbjct: 126 DTNIKLWDIR--RKGCVFRYRGHSQAVRCLRFSPDG-KWLASAADDHTVKLWDLTAGKMM 182
Query: 630 PCYTASSSKGNVMVCFSPDDHYLLVSAVDNEVR 662
+ + NV V F P+++ L + D +R
Sbjct: 183 SEFPGHTGPVNV-VEFHPNEYLLASGSSDRTIR 214
>sp|Q24572|CAF1_DROME Probable histone-binding protein Caf1 OS=Drosophila melanogaster
GN=Caf1 PE=1 SV=1
Length = 430
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 39/261 (14%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNH-----ENENIVSYIPS 494
+ + NH G+ NR+ Y P +C++ T +++V ++ + E P
Sbjct: 121 IEIKINHEGEVNRA------RYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPD 174
Query: 495 F---GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIR-----GMHYGAGTVT 546
G GL W L++ SD+ ++ L+DI P R + G V
Sbjct: 175 LRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVV 234
Query: 547 FDEFDQLTSVHVNSMDELFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNH 604
D L +H + LF + + + ++D N+ + D H +N + F+ +
Sbjct: 235 EDVAWHL--LH----ESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPY 288
Query: 605 SPSIFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLVSAVDNEVRQ 663
S I AT S D+ V LWDLR ++ ++ S K + V +SP + +L S+
Sbjct: 289 SEFILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASS------- 340
Query: 664 LLAVDGRVHLNFGITATGSSQ 684
D R+H+ + ++ G Q
Sbjct: 341 --GTDRRLHV-WDLSKIGEEQ 358
>sp|Q54YD8|COPB2_DICDI Coatomer subunit beta' OS=Dictyostelium discoideum GN=copb2 PE=3
SV=1
Length = 1005
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 126/295 (42%), Gaps = 25/295 (8%)
Query: 452 RSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYP 511
RS R + + HP+ ++ DG + + N+E +N+V N V ++ K
Sbjct: 14 RSDRVKSVDIHPTEPWILA-SLYDGNVYIWNYETQNMVKSF-EVSPNNPVRTARFIAK-K 70
Query: 512 SKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYS 571
++ GSD+ +++Y+ M I+ A D + + V+ L+S
Sbjct: 71 QWIVTGSDDTYIRVYNYNTME-KIKSFEAHA--------DYIRCIIVHPTLPYILSSSDD 121
Query: 572 KNIALYDINSG-RRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQP 630
I L+D G QVF + H ++ + ++ + FAT+S D+ VK+W + P
Sbjct: 122 MFIKLWDYEKGWSNTQVF-EGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSP--HP 178
Query: 631 CYTASS-SKG-NVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRVHLNFGITATGSSQNYTR 688
+T KG N + FS + L+S D+++ ++ + + T G S N +
Sbjct: 179 HFTLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQ---TLEGHSNNVSV 235
Query: 689 SYYLNGRDYIVSGSCDEHVVRICCAQTGRRLRDISLEGKGSGTSMFVQSLRGDPF 743
Y I+SGS D V++ + T R R ++ G G + LRG F
Sbjct: 236 VCYHPELPLILSGSED-GTVKLWHSSTYRLERTLNY---GMGFVWSMNFLRGSNF 286
>sp|O14775|GBB5_HUMAN Guanine nucleotide-binding protein subunit beta-5 OS=Homo sapiens
GN=GNB5 PE=1 SV=2
Length = 395
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 19/223 (8%)
Query: 461 YHPSISCLMVFGTLDGEIVV---VNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAG 517
Y PS C + G LD + V +NEN+ + S + L C +++
Sbjct: 155 YAPS-GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTA 213
Query: 518 SDNGSLKLYDIR--HMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIA 575
S +G+ L+D+ + S G +GA + D + + F++ G K
Sbjct: 214 SGDGTCALWDVESGQLLQSFHG--HGADVLCLD-------LAPSETGNTFVSGGCDKKAM 264
Query: 576 LYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTAS 635
++D+ SG+ +Q F + H+ IN V++ S FA+ S D +L+DLR Y+
Sbjct: 265 VWDMRSGQCVQAF-ETHESDINSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKE 322
Query: 636 SSK-GNVMVCFSPDDHYLLVSAVDNEVRQLLAVDG-RVHLNFG 676
S G V FS L D + + G RV + FG
Sbjct: 323 SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFG 365
>sp|Q2YDS1|DDB2_DANRE DNA damage-binding protein 2 OS=Danio rerio GN=ddb2 PE=1 SV=2
Length = 496
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 455 RPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKL 514
R E+HP+ + G+ G+I++ +++ N S+I G +++ G+ + + ++L
Sbjct: 115 RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVLNKTSFIQGMGPGDAITGMKFNQFNTNQL 174
Query: 515 IAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNI 574
S G+ L D S + A T ++D + V V+ LA+G S
Sbjct: 175 FVSSIWGATTLRDF-----SGSVIQVFAKTDSWDYWYCCVDVSVSRQ---MLATGDSTGR 226
Query: 575 ALYDINSGRRLQVFAD-MHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYT 633
L G ++F + +HK + +F+ + ATSS D VKLWDLR + Y
Sbjct: 227 LLLLGLDGH--EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYI 284
Query: 634 AS--SSKGNVMVCFSP-DDHYLLVSAVDNEVR 662
A K F+P D LL + NE+R
Sbjct: 285 AEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIR 316
>sp|Q6P2Y2|WDR69_XENTR Outer row dynein assembly protein 16 homolog OS=Xenopus tropicalis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 11/172 (6%)
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
LT+V N F+ Y + ++D SG L + H+ + ++F+N AT
Sbjct: 95 LTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTL-EGHRNVVYAIQFNNPYGDKIATG 153
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVRQLLAVDGR 670
SFD+ KLW CY +VC F+P + ++D + G
Sbjct: 154 SFDKTCKLW---SAETGKCYHTFRGHTAEIVCLAFNPQSTLIATGSMDTTAKLWDIQSGE 210
Query: 671 VHLNFGITATGSSQNYTRSYYLNGRDYIVSGSCDEHVVRICCAQTGRRLRDI 722
L T +G + + D +++GS D H V + +GRR+ +
Sbjct: 211 EAL----TLSGHAAEIISLSFNTTGDRLITGSFD-HTVSVWEIPSGRRIHTL 257
>sp|Q5FWQ6|WDR69_XENLA Outer row dynein assembly protein 16 homolog OS=Xenopus laevis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 11/172 (6%)
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
LT+V N F+ Y + ++D SG L + H+ + ++F+N AT
Sbjct: 95 LTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTL-EGHRNVVYAIQFNNPYGDKIATG 153
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVRQLLAVDGR 670
SFD+ KLW CY +VC F+P + ++D + G
Sbjct: 154 SFDKTCKLW---SAETGKCYHTFRGHTAEIVCLVFNPQSTLIATGSMDTTAKLWDIQSGE 210
Query: 671 VHLNFGITATGSSQNYTRSYYLNGRDYIVSGSCDEHVVRICCAQTGRRLRDI 722
L T +G + + D +++GS D H V + +GRR+ +
Sbjct: 211 EAL----TLSGHAAEIISLSFNTTGDRLITGSFD-HTVSVWEIPSGRRIHTL 257
>sp|Q5RDY7|GBB5_PONAB Guanine nucleotide-binding protein subunit beta-5 OS=Pongo abelii
GN=GNB5 PE=2 SV=1
Length = 353
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 19/223 (8%)
Query: 461 YHPSISCLMVFGTLDGEIVV---VNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAG 517
Y PS C + G LD + V +NEN+ + S + L C +++
Sbjct: 113 YAPS-GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTA 171
Query: 518 SDNGSLKLYDIR--HMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIA 575
S +G+ L+D+ + S G +GA + D + + F++ G K
Sbjct: 172 SGDGTCALWDVESGQLLQSFHG--HGADVLCLD-------LAPSETGNTFVSGGCDKKAM 222
Query: 576 LYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTAS 635
++D+ SG+ +Q F + H+ IN V++ S FA+ S D +L+DLR Y+
Sbjct: 223 VWDMRSGQCVQAF-ETHESDINSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKE 280
Query: 636 SSK-GNVMVCFSPDDHYLLVSAVDNEVRQLLAVDG-RVHLNFG 676
S G V FS L D + + G RV + FG
Sbjct: 281 SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFG 323
>sp|P62881|GBB5_MOUSE Guanine nucleotide-binding protein subunit beta-5 OS=Mus musculus
GN=Gnb5 PE=1 SV=1
Length = 395
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 19/223 (8%)
Query: 461 YHPSISCLMVFGTLDGEIVV---VNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAG 517
Y PS C + G LD + V +NEN+ + S + L C +++
Sbjct: 155 YAPS-GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTA 213
Query: 518 SDNGSLKLYDIR--HMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIA 575
S +G+ L+D+ + S G +GA + D + + F++ G K
Sbjct: 214 SGDGTCALWDVESGQLLQSFHG--HGADVLCLD-------LAPSETGNTFVSGGCDKKAM 264
Query: 576 LYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTAS 635
++D+ SG+ +Q F + H+ +N V++ S FA+ S D +L+DLR Y+
Sbjct: 265 VWDMRSGQCVQAF-ETHESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKE 322
Query: 636 SSK-GNVMVCFSPDDHYLLVSAVDNEVRQLLAVDG-RVHLNFG 676
S G V FS L D + + G RV + FG
Sbjct: 323 SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFG 365
>sp|Q80ZD0|GBB5_TAMST Guanine nucleotide-binding protein subunit beta-5 OS=Tamias
striatus GN=GNB5 PE=2 SV=1
Length = 353
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 19/223 (8%)
Query: 461 YHPSISCLMVFGTLDGEIVV---VNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAG 517
Y PS C + G LD + V +NEN+ + S + L C +++
Sbjct: 113 YAPS-GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTA 171
Query: 518 SDNGSLKLYDIR--HMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIA 575
S +G+ L+D+ + S G +GA + D + + F++ G K
Sbjct: 172 SGDGTCALWDVESGQLLQSFHG--HGADVLCLD-------LAPSETGNTFVSGGCDKKAM 222
Query: 576 LYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTAS 635
++D+ SG+ +Q F + H+ IN V++ S FA+ S D +L+DLR Y+
Sbjct: 223 VWDMRSGQCVQAF-ETHESDINSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKE 280
Query: 636 SSK-GNVMVCFSPDDHYLLVSAVDNEVRQLLAVDG-RVHLNFG 676
S G V FS L D + + G RV + FG
Sbjct: 281 SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFG 323
>sp|Q4R8E7|WDR69_MACFA Outer row dynein assembly protein 16 homolog OS=Macaca fascicularis
GN=WDR69 PE=2 SV=1
Length = 415
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 11/169 (6%)
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
LT+V +N F+ Y + L+D SG L + H+ + + F+N AT
Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTL-EGHRNVVYAIAFNNPYGDKTATG 153
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVRQLLAVDGR 670
SFD+ KLW + CY +VC F+P + ++D + +G
Sbjct: 154 SFDKTCKLWSVETG---KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWNIQNGE 210
Query: 671 VHLNFGITATGSSQNYTRSYYLNGRDYIVSGSCDEHVVRICCAQTGRRL 719
T G S + D I++GS D H V + A TG ++
Sbjct: 211 EV----CTLRGHSAEIISLSFNTSGDRIITGSFD-HTVVVWDADTGGKV 254
>sp|C4YFX2|TUP1_CANAW Transcriptional repressor TUP1 OS=Candida albicans (strain WO-1)
GN=TUP1 PE=4 SV=1
Length = 511
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 21/159 (13%)
Query: 513 KLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSK 572
+L++GS + S++++D+R S+ T D +T+V V+ +L A +
Sbjct: 310 RLVSGSGDRSVRIWDLRTSQCSL----------TLSIEDGVTTVAVSPDGKLIAAGSLDR 359
Query: 573 NIALYDINSGRRLQVF------ADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQK 626
+ ++D +G ++ + H++ + V FSN+ I A+ S D+ VKLW L K
Sbjct: 360 TVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQI-ASGSLDRTVKLWHLEGK 418
Query: 627 PIQPCYTASSSKGN----VMVCFSPDDHYLLVSAVDNEV 661
+ + G+ + VC +PD+ Y+L + D V
Sbjct: 419 SDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGV 457
>sp|P0CY34|TUP1_CANAL Transcriptional repressor TUP1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=TUP1 PE=1 SV=1
Length = 512
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 21/159 (13%)
Query: 513 KLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSK 572
+L++GS + S++++D+R S+ T D +T+V V+ +L A +
Sbjct: 311 RLVSGSGDRSVRIWDLRTSQCSL----------TLSIEDGVTTVAVSPDGKLIAAGSLDR 360
Query: 573 NIALYDINSGRRLQVF------ADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQK 626
+ ++D +G ++ + H++ + V FSN+ I A+ S D+ VKLW L K
Sbjct: 361 TVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQI-ASGSLDRTVKLWHLEGK 419
Query: 627 PIQPCYTASSSKGN----VMVCFSPDDHYLLVSAVDNEV 661
+ + G+ + VC +PD+ Y+L + D V
Sbjct: 420 SDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGV 458
>sp|Q6PNB6|GBB5_RABIT Guanine nucleotide-binding protein subunit beta-5 OS=Oryctolagus
cuniculus GN=GNB5 PE=2 SV=1
Length = 353
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 19/223 (8%)
Query: 461 YHPSISCLMVFGTLDGEIVV---VNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAG 517
Y PS C + G LD + V +NEN+ + S + L C +++
Sbjct: 113 YAPS-GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTA 171
Query: 518 SDNGSLKLYDIR--HMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIA 575
S +G+ L+D+ + S G +GA + D + + F++ G K
Sbjct: 172 SGDGTCALWDVESGQLLQSFHG--HGADVLCLD-------LAPSETGNTFVSGGCDKKAM 222
Query: 576 LYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTAS 635
++D+ SG+ +Q F + H+ IN V++ S FA+ S D +L+DLR Y+
Sbjct: 223 VWDMRSGQCVQAF-ETHESDINSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKE 280
Query: 636 SSK-GNVMVCFSPDDHYLLVSAVDNEVRQLLAVDG-RVHLNFG 676
S G V FS L D + + G RV + FG
Sbjct: 281 SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGARVSILFG 323
>sp|O00628|PEX7_HUMAN Peroxisomal targeting signal 2 receptor OS=Homo sapiens GN=PEX7
PE=1 SV=1
Length = 323
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Query: 494 SFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQL 553
SF + + + W + LI S +GSL+L+D ++ A V ++ Q
Sbjct: 63 SFDWNDGLFDVTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQT 122
Query: 554 TSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
++L ++ + + + L+D G+ L F H+ I +S H P FA++S
Sbjct: 123 RG------EQLVVSGSWDQTVKLWDPTVGKSLCTFRG-HESIIYSTIWSPHIPGCFASAS 175
Query: 614 FDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYLLVSAVDNEVR 662
DQ +++WD++ ++ + + ++ C +++ L+ AVD +R
Sbjct: 176 GDQTLRIWDVKAAGVR--IVIPAHQAEILSCDWCKYNENLLVTGAVDCSLR 224
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 66/165 (40%), Gaps = 15/165 (9%)
Query: 461 YHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAGSDN 520
+ P I + D + + + + + IP+ A +L W K + L+ G+ +
Sbjct: 163 WSPHIPGCFASASGDQTLRIWDVKAAGVRIVIPAHQA--EILSCDWCKYNENLLVTGAVD 220
Query: 521 GSLKLYDIRHMPPSI---RGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALY 577
SL+ +D+R++ + G Y V F F + + Y + +
Sbjct: 221 CSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHA----------SVLASCSYDFTVRFW 270
Query: 578 DINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWD 622
+ + L + H E + FS SP+ A S+D+ +K++D
Sbjct: 271 NFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 315
>sp|P62882|GBB5_RAT Guanine nucleotide-binding protein subunit beta-5 OS=Rattus
norvegicus GN=Gnb5 PE=2 SV=1
Length = 353
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 19/223 (8%)
Query: 461 YHPSISCLMVFGTLDGEIVV---VNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAG 517
Y PS C + G LD + V +NEN+ + S + L C +++
Sbjct: 113 YAPS-GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTA 171
Query: 518 SDNGSLKLYDIR--HMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIA 575
S +G+ L+D+ + S G +GA + D + + F++ G K
Sbjct: 172 SGDGTCALWDVESGQLLQSFHG--HGADVLCLD-------LAPSETGNTFVSGGCDKKAM 222
Query: 576 LYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTAS 635
++D+ SG+ +Q F + H+ +N V++ S FA+ S D +L+DLR Y+
Sbjct: 223 VWDMRSGQCVQAF-ETHESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKE 280
Query: 636 SSK-GNVMVCFSPDDHYLLVSAVDNEVRQLLAVDG-RVHLNFG 676
S G V FS L D + + G RV + FG
Sbjct: 281 SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFG 323
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 292,250,727
Number of Sequences: 539616
Number of extensions: 12329022
Number of successful extensions: 29472
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 518
Number of HSP's that attempted gapping in prelim test: 28342
Number of HSP's gapped (non-prelim): 1356
length of query: 793
length of database: 191,569,459
effective HSP length: 126
effective length of query: 667
effective length of database: 123,577,843
effective search space: 82426421281
effective search space used: 82426421281
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)