Query 003824
Match_columns 793
No_of_seqs 352 out of 2725
Neff 8.8
Searched_HMMs 46136
Date Thu Mar 28 12:43:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003824.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003824hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0206 P-type ATPase [General 100.0 1E-145 3E-150 1268.6 43.7 729 1-752 364-1093(1151)
2 PLN03190 aminophospholipid tra 100.0 1E-125 3E-130 1142.9 73.9 720 1-755 430-1161(1178)
3 TIGR01652 ATPase-Plipid phosph 100.0 6E-118 1E-122 1089.5 75.1 719 1-746 336-1057(1057)
4 KOG0210 P-type ATPase [Inorgan 100.0 6E-108 1E-112 871.1 46.2 657 8-745 391-1050(1051)
5 COG0474 MgtA Cation transport 100.0 2E-86 4.3E-91 793.6 43.2 556 4-719 328-898 (917)
6 KOG0202 Ca2+ transporting ATPa 100.0 3.3E-86 7.1E-91 724.9 35.5 613 4-737 312-970 (972)
7 TIGR01523 ATPase-IID_K-Na pota 100.0 8.3E-81 1.8E-85 751.9 56.7 642 4-736 339-1048(1053)
8 KOG0204 Calcium transporting A 100.0 3.6E-83 7.7E-88 699.8 26.9 567 4-732 415-1005(1034)
9 TIGR01116 ATPase-IIA1_Ca sarco 100.0 1.3E-79 2.9E-84 739.6 50.1 609 5-734 270-917 (917)
10 TIGR01106 ATPase-IIC_X-K sodiu 100.0 8.7E-79 1.9E-83 737.1 49.5 609 5-736 325-986 (997)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 9.4E-77 2E-81 717.7 48.8 560 4-732 356-938 (941)
12 TIGR01522 ATPase-IIA2_Ca golgi 100.0 7.5E-73 1.6E-77 679.8 51.1 559 4-736 304-883 (884)
13 TIGR01657 P-ATPase-V P-type AT 100.0 1.1E-70 2.4E-75 670.7 49.8 573 4-684 428-1024(1054)
14 PRK15122 magnesium-transportin 100.0 1.5E-70 3.2E-75 656.0 46.9 534 4-735 349-898 (903)
15 PRK10517 magnesium-transportin 100.0 5.7E-68 1.2E-72 632.7 45.6 533 4-736 351-899 (902)
16 TIGR01524 ATPase-IIIB_Mg magne 100.0 2E-67 4.3E-72 628.8 49.2 526 4-730 316-857 (867)
17 KOG0203 Na+/K+ ATPase, alpha s 100.0 6.8E-69 1.5E-73 587.1 17.8 611 3-736 345-1008(1019)
18 KOG0208 Cation transport ATPas 100.0 1.2E-62 2.7E-67 546.0 30.3 540 4-629 448-1011(1140)
19 TIGR01647 ATPase-IIIA_H plasma 100.0 3.7E-61 8.1E-66 567.9 43.0 452 4-658 266-721 (755)
20 PRK14010 potassium-transportin 100.0 7.6E-51 1.6E-55 464.3 30.2 353 4-583 278-644 (673)
21 PRK01122 potassium-transportin 100.0 3.7E-49 8E-54 450.8 32.9 356 4-583 278-648 (679)
22 KOG0209 P-type ATPase [Inorgan 100.0 6.2E-48 1.3E-52 419.7 37.8 594 9-738 464-1149(1160)
23 TIGR01497 kdpB K+-transporting 100.0 8.2E-47 1.8E-51 430.5 30.1 357 4-583 279-649 (675)
24 TIGR01494 ATPase_P-type ATPase 100.0 1.1E-41 2.3E-46 388.7 30.9 272 5-537 211-484 (499)
25 KOG0205 Plasma membrane H+-tra 100.0 3.9E-42 8.4E-47 366.3 21.8 470 4-674 307-791 (942)
26 COG2217 ZntA Cation transport 100.0 2.2E-37 4.7E-42 353.9 28.3 293 6-537 387-682 (713)
27 PRK11033 zntA zinc/cadmium/mer 100.0 6.4E-35 1.4E-39 343.9 30.4 288 6-535 418-709 (741)
28 KOG0207 Cation transport ATPas 100.0 3.4E-34 7.4E-39 320.2 29.2 301 6-535 564-866 (951)
29 TIGR01525 ATPase-IB_hvy heavy 100.0 1.8E-33 3.9E-38 324.1 27.3 299 5-535 227-528 (556)
30 COG2216 KdpB High-affinity K+ 100.0 1.3E-32 2.8E-37 287.8 18.6 357 3-582 278-649 (681)
31 TIGR01511 ATPase-IB1_Cu copper 100.0 1.5E-31 3.2E-36 307.2 28.4 288 5-535 258-547 (562)
32 TIGR01512 ATPase-IB2_Cd heavy 100.0 2E-31 4.4E-36 305.1 25.7 279 5-536 227-508 (536)
33 PRK10671 copA copper exporting 100.0 1.5E-30 3.3E-35 313.1 30.8 294 5-535 498-793 (834)
34 PF00702 Hydrolase: haloacid d 99.9 1.8E-22 3.8E-27 205.3 12.5 97 292-474 115-215 (215)
35 PF13246 Hydrolase_like2: Puta 99.6 1.1E-15 2.3E-20 131.3 6.0 90 117-224 1-90 (91)
36 COG4087 Soluble P-type ATPase 99.5 6.8E-14 1.5E-18 121.7 10.6 126 293-505 19-146 (152)
37 PF00689 Cation_ATPase_C: Cati 99.4 1.1E-12 2.4E-17 129.6 10.3 173 547-732 2-182 (182)
38 PRK10513 sugar phosphate phosp 99.0 9.5E-10 2E-14 116.0 8.0 61 436-497 189-254 (270)
39 COG0561 Cof Predicted hydrolas 98.9 1.2E-08 2.7E-13 107.1 13.7 186 305-497 21-247 (264)
40 PRK15126 thiamin pyrimidine py 98.9 2.1E-09 4.5E-14 113.5 6.2 199 292-497 10-248 (272)
41 PRK01158 phosphoglycolate phos 98.8 1.7E-08 3.7E-13 103.7 10.4 182 305-497 21-215 (230)
42 COG0560 SerB Phosphoserine pho 98.8 5E-08 1.1E-12 97.9 13.4 112 303-484 76-190 (212)
43 PRK10976 putative hydrolase; P 98.8 5.4E-09 1.2E-13 109.9 5.7 63 434-497 181-250 (266)
44 TIGR02137 HSK-PSP phosphoserin 98.7 5E-08 1.1E-12 97.4 10.4 126 304-504 68-194 (203)
45 PRK11133 serB phosphoserine ph 98.7 3.9E-08 8.4E-13 105.0 10.2 129 304-505 181-312 (322)
46 TIGR01482 SPP-subfamily Sucros 98.7 2.8E-08 6E-13 101.7 8.7 179 304-497 15-207 (225)
47 TIGR01487 SPP-like sucrose-pho 98.7 5.7E-08 1.2E-12 98.7 10.4 178 304-497 18-205 (215)
48 PLN02887 hydrolase family prot 98.7 3E-08 6.4E-13 113.3 9.0 61 436-497 500-565 (580)
49 PF08282 Hydrolase_3: haloacid 98.7 1.2E-08 2.6E-13 106.1 5.2 195 304-499 15-246 (254)
50 PRK03669 mannosyl-3-phosphogly 98.7 1.6E-07 3.4E-12 99.0 12.2 186 305-497 25-254 (271)
51 PRK10530 pyridoxal phosphate ( 98.7 6.2E-08 1.3E-12 102.3 9.1 56 441-497 199-257 (272)
52 TIGR01486 HAD-SF-IIB-MPGP mann 98.6 3.6E-07 7.7E-12 95.5 12.9 188 305-497 17-242 (256)
53 TIGR00099 Cof-subfamily Cof su 98.5 1.3E-07 2.8E-12 98.8 6.8 62 435-497 180-246 (256)
54 KOG4383 Uncharacterized conser 98.5 9.2E-06 2E-10 89.3 19.8 289 290-586 812-1153(1354)
55 TIGR00338 serB phosphoserine p 98.5 3.8E-07 8.2E-12 92.9 8.9 123 304-499 85-211 (219)
56 TIGR01670 YrbI-phosphatas 3-de 98.4 2.1E-06 4.6E-11 82.0 10.0 96 312-497 36-134 (154)
57 TIGR02726 phenyl_P_delta pheny 98.4 1.4E-06 3E-11 84.0 8.7 100 311-497 41-140 (169)
58 PRK00192 mannosyl-3-phosphogly 98.4 3.5E-06 7.5E-11 88.9 12.5 50 292-344 12-61 (273)
59 TIGR02461 osmo_MPG_phos mannos 98.3 1.5E-06 3.3E-11 88.5 9.2 52 302-353 13-68 (225)
60 KOG1615 Phosphoserine phosphat 98.3 9.5E-07 2.1E-11 83.3 6.7 111 304-482 88-201 (227)
61 TIGR02471 sucr_syn_bact_C sucr 98.3 2.7E-06 5.9E-11 87.7 9.3 56 436-492 152-212 (236)
62 PRK13582 thrH phosphoserine ph 98.2 6.6E-06 1.4E-10 82.8 10.9 126 304-504 68-194 (205)
63 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.2 6.1E-06 1.3E-10 82.7 10.2 118 304-492 80-200 (201)
64 TIGR02463 MPGP_rel mannosyl-3- 98.2 9.5E-06 2.1E-10 82.7 11.5 37 308-344 20-56 (221)
65 PRK12702 mannosyl-3-phosphogly 98.2 1.4E-05 3E-10 82.3 12.4 40 304-343 18-57 (302)
66 PRK09484 3-deoxy-D-manno-octul 98.2 4.5E-06 9.8E-11 82.2 8.5 111 311-511 55-175 (183)
67 PRK14502 bifunctional mannosyl 98.2 1.9E-05 4.2E-10 90.2 13.7 49 305-353 434-486 (694)
68 TIGR01485 SPP_plant-cyano sucr 98.2 1.3E-05 2.8E-10 83.4 11.4 177 302-484 19-214 (249)
69 PRK10187 trehalose-6-phosphate 98.2 5.8E-05 1.3E-09 79.0 16.4 184 304-502 36-237 (266)
70 PF12710 HAD: haloacid dehalog 98.1 8.4E-06 1.8E-10 81.0 9.0 39 307-345 92-130 (192)
71 TIGR01484 HAD-SF-IIB HAD-super 98.0 3E-05 6.6E-10 77.9 10.7 172 304-479 17-204 (204)
72 PLN02954 phosphoserine phospha 98.0 3.4E-05 7.4E-10 78.8 11.0 41 304-344 84-124 (224)
73 TIGR03333 salvage_mtnX 2-hydro 98.0 3.5E-05 7.5E-10 78.1 10.3 140 303-506 69-209 (214)
74 PRK08238 hypothetical protein; 98.0 0.00083 1.8E-08 75.8 22.1 40 304-343 72-111 (479)
75 PLN02382 probable sucrose-phos 98.0 4.8E-05 1E-09 84.5 11.5 174 309-489 33-229 (413)
76 PTZ00174 phosphomannomutase; P 98.0 2.6E-05 5.6E-10 80.9 8.9 48 436-484 181-235 (247)
77 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.9 4.6E-05 9.9E-10 76.4 8.9 112 302-482 85-199 (202)
78 TIGR01488 HAD-SF-IB Haloacid D 97.9 5E-05 1.1E-09 74.3 8.8 40 305-344 74-113 (177)
79 TIGR01489 DKMTPPase-SF 2,3-dik 97.7 0.00012 2.7E-09 72.3 9.2 42 303-344 71-112 (188)
80 cd01427 HAD_like Haloacid deha 97.7 9.2E-05 2E-09 68.4 7.8 117 301-478 21-138 (139)
81 PRK09552 mtnX 2-hydroxy-3-keto 97.7 0.0002 4.3E-09 72.9 9.8 136 304-504 74-211 (219)
82 COG1778 Low specificity phosph 97.7 0.00011 2.4E-09 67.3 6.7 110 311-511 42-160 (170)
83 PRK14501 putative bifunctional 97.7 0.00075 1.6E-08 81.1 15.8 187 305-504 515-719 (726)
84 PRK13222 phosphoglycolate phos 97.6 0.0004 8.7E-09 70.9 11.5 42 303-344 92-133 (226)
85 COG0546 Gph Predicted phosphat 97.5 0.00066 1.4E-08 69.1 11.2 126 302-504 87-216 (220)
86 TIGR01454 AHBA_synth_RP 3-amin 97.5 0.00055 1.2E-08 68.8 10.5 41 304-344 75-115 (205)
87 PRK13223 phosphoglycolate phos 97.3 0.0015 3.2E-08 68.7 10.4 41 303-343 100-140 (272)
88 TIGR01449 PGP_bact 2-phosphogl 97.3 0.0014 3E-08 66.2 9.8 41 304-344 85-125 (213)
89 TIGR00685 T6PP trehalose-phosp 97.2 0.0099 2.1E-07 61.5 15.3 66 436-504 162-238 (244)
90 PRK13226 phosphoglycolate phos 97.1 0.0025 5.5E-08 65.2 10.1 40 304-343 95-134 (229)
91 PLN02423 phosphomannomutase 97.1 0.0021 4.6E-08 66.4 9.6 42 441-484 189-235 (245)
92 PRK13288 pyrophosphatase PpaX; 97.0 0.0025 5.5E-08 64.4 9.1 41 304-344 82-122 (214)
93 PF05116 S6PP: Sucrose-6F-phos 97.0 0.0036 7.8E-08 64.8 10.0 165 316-484 31-211 (247)
94 PRK11590 hypothetical protein; 97.0 0.011 2.3E-07 59.7 13.3 111 304-484 95-206 (211)
95 PLN03243 haloacid dehalogenase 97.0 0.0047 1E-07 64.4 10.8 124 304-504 109-233 (260)
96 PRK13225 phosphoglycolate phos 97.0 0.0052 1.1E-07 64.5 11.1 41 304-344 142-182 (273)
97 TIGR01545 YfhB_g-proteo haloac 97.0 0.0046 9.9E-08 62.3 10.3 110 304-483 94-204 (210)
98 TIGR01544 HAD-SF-IE haloacid d 96.9 0.0042 9.2E-08 64.4 9.8 44 304-347 121-164 (277)
99 PRK10826 2-deoxyglucose-6-phos 96.8 0.0056 1.2E-07 62.3 9.5 42 303-344 91-132 (222)
100 PLN02580 trehalose-phosphatase 96.8 0.059 1.3E-06 58.7 17.5 68 435-505 292-373 (384)
101 PLN02205 alpha,alpha-trehalose 96.7 0.082 1.8E-06 64.1 19.2 202 292-504 604-840 (854)
102 PRK11587 putative phosphatase; 96.6 0.012 2.6E-07 59.7 10.0 40 304-343 83-122 (218)
103 TIGR03351 PhnX-like phosphonat 96.5 0.014 3E-07 59.3 9.9 42 303-344 86-127 (220)
104 PLN02575 haloacid dehalogenase 96.5 0.019 4.2E-07 62.5 11.0 41 304-344 216-256 (381)
105 TIGR01422 phosphonatase phosph 96.4 0.016 3.6E-07 60.2 10.0 41 304-344 99-139 (253)
106 PRK13478 phosphonoacetaldehyde 96.3 0.031 6.8E-07 58.6 11.6 40 304-343 101-140 (267)
107 smart00775 LNS2 LNS2 domain. T 96.2 0.034 7.3E-07 53.2 9.7 34 302-335 25-58 (157)
108 COG4030 Uncharacterized protei 96.2 0.042 9.1E-07 53.7 10.1 159 304-497 83-251 (315)
109 TIGR02253 CTE7 HAD superfamily 96.1 0.042 9.1E-07 55.7 10.8 40 304-343 94-133 (221)
110 TIGR01548 HAD-SF-IA-hyp1 haloa 96.1 0.023 4.9E-07 56.7 8.4 43 302-344 104-146 (197)
111 TIGR01672 AphA HAD superfamily 96.1 0.012 2.6E-07 60.1 6.4 41 304-344 114-158 (237)
112 PRK06769 hypothetical protein; 96.1 0.045 9.8E-07 53.3 10.3 27 305-331 29-55 (173)
113 PRK06698 bifunctional 5'-methy 96.0 0.055 1.2E-06 61.6 12.2 41 304-344 330-370 (459)
114 PLN03017 trehalose-phosphatase 96.0 0.62 1.3E-05 50.4 19.1 207 292-504 119-354 (366)
115 PLN02770 haloacid dehalogenase 96.0 0.032 6.9E-07 57.9 9.3 41 304-344 108-148 (248)
116 PLN02779 haloacid dehalogenase 95.9 0.041 8.8E-07 58.3 10.0 37 304-340 144-180 (286)
117 COG3769 Predicted hydrolase (H 95.9 0.21 4.5E-06 48.9 13.4 46 308-353 27-77 (274)
118 PRK09449 dUMP phosphatase; Pro 95.8 0.091 2E-06 53.4 11.5 39 304-343 95-133 (224)
119 TIGR01662 HAD-SF-IIIA HAD-supe 95.7 0.048 1E-06 50.4 8.5 41 303-343 24-72 (132)
120 PRK11009 aphA acid phosphatase 95.7 0.026 5.7E-07 57.6 7.1 40 304-343 114-157 (237)
121 PRK08942 D,D-heptose 1,7-bisph 95.6 0.1 2.2E-06 51.2 10.9 53 453-505 119-176 (181)
122 PLN02940 riboflavin kinase 95.4 0.067 1.4E-06 59.1 9.3 40 304-343 93-133 (382)
123 COG4359 Uncharacterized conser 95.3 0.071 1.5E-06 50.6 7.8 38 440-478 146-183 (220)
124 TIGR01428 HAD_type_II 2-haloal 95.3 0.062 1.4E-06 53.5 8.3 40 304-343 92-131 (198)
125 PHA02530 pseT polynucleotide k 95.3 0.042 9E-07 58.8 7.4 44 301-344 184-227 (300)
126 PF13419 HAD_2: Haloacid dehal 95.2 0.048 1E-06 52.5 6.8 43 302-344 75-117 (176)
127 PRK14988 GMP/IMP nucleotidase; 95.1 0.12 2.7E-06 52.5 9.8 41 304-344 93-133 (224)
128 TIGR02254 YjjG/YfnB HAD superf 95.1 0.15 3.3E-06 51.7 10.3 40 304-344 97-136 (224)
129 TIGR01990 bPGM beta-phosphoglu 95.0 0.06 1.3E-06 52.8 6.9 38 304-343 87-124 (185)
130 TIGR01509 HAD-SF-IA-v3 haloaci 94.7 0.13 2.8E-06 50.2 8.4 39 304-343 85-123 (183)
131 TIGR01685 MDP-1 magnesium-depe 94.7 0.15 3.2E-06 49.5 8.4 51 294-344 35-86 (174)
132 PLN02811 hydrolase 94.7 0.12 2.6E-06 52.5 8.3 30 304-333 78-107 (220)
133 TIGR02009 PGMB-YQAB-SF beta-ph 94.6 0.082 1.8E-06 51.8 6.8 39 303-343 87-125 (185)
134 PLN02151 trehalose-phosphatase 94.1 1.9 4.1E-05 46.6 16.0 234 258-505 71-341 (354)
135 TIGR01549 HAD-SF-IA-v1 haloaci 93.9 0.2 4.3E-06 47.5 7.6 40 302-341 62-101 (154)
136 TIGR00213 GmhB_yaeD D,D-heptos 93.6 0.49 1.1E-05 46.1 9.8 48 454-501 123-174 (176)
137 TIGR01533 lipo_e_P4 5'-nucleot 93.3 0.42 9.2E-06 49.6 9.1 33 302-334 116-148 (266)
138 smart00577 CPDc catalytic doma 93.1 0.13 2.9E-06 48.6 4.7 42 301-343 42-83 (148)
139 TIGR02252 DREG-2 REG-2-like, H 93.0 0.34 7.4E-06 48.3 8.0 39 304-343 105-143 (203)
140 TIGR01668 YqeG_hyp_ppase HAD s 93.0 0.35 7.6E-06 46.8 7.7 40 304-343 43-83 (170)
141 TIGR01261 hisB_Nterm histidino 92.7 0.37 8E-06 46.2 7.2 26 304-329 29-54 (161)
142 TIGR01656 Histidinol-ppas hist 92.4 0.3 6.6E-06 46.0 6.2 27 304-330 27-53 (147)
143 PF02358 Trehalose_PPase: Treh 91.9 1 2.2E-05 46.2 9.9 187 304-496 19-232 (235)
144 TIGR01681 HAD-SF-IIIC HAD-supe 91.6 0.39 8.6E-06 44.1 5.8 39 304-342 29-68 (128)
145 TIGR02247 HAD-1A3-hyp Epoxide 91.0 0.47 1E-05 47.6 6.3 28 304-331 94-121 (211)
146 PRK05446 imidazole glycerol-ph 90.9 0.64 1.4E-05 50.4 7.5 27 303-329 29-55 (354)
147 PF08235 LNS2: LNS2 (Lipin/Ned 90.3 1.4 3.1E-05 41.6 8.2 113 303-477 26-142 (157)
148 TIGR01675 plant-AP plant acid 90.0 1.2 2.5E-05 45.1 7.9 30 304-333 120-149 (229)
149 PRK10563 6-phosphogluconate ph 90.0 0.69 1.5E-05 46.8 6.5 37 304-343 88-124 (221)
150 PF06888 Put_Phosphatase: Puta 89.8 1.6 3.5E-05 44.4 8.7 41 304-344 71-113 (234)
151 TIGR01691 enolase-ppase 2,3-di 89.7 1.6 3.5E-05 44.1 8.8 37 302-338 93-129 (220)
152 TIGR01664 DNA-3'-Pase DNA 3'-p 89.5 1.6 3.5E-05 42.0 8.3 27 305-331 43-69 (166)
153 PLN02919 haloacid dehalogenase 88.4 1.8 3.8E-05 54.4 9.6 41 304-344 161-201 (1057)
154 TIGR01686 FkbH FkbH-like domai 87.9 0.98 2.1E-05 48.7 6.2 37 304-340 31-67 (320)
155 TIGR01459 HAD-SF-IIA-hyp4 HAD- 87.4 2.9 6.3E-05 43.0 9.1 47 297-343 17-65 (242)
156 PHA02597 30.2 hypothetical pro 86.8 2.6 5.6E-05 41.7 8.1 39 304-343 74-112 (197)
157 KOG3120 Predicted haloacid deh 86.3 5.7 0.00012 39.3 9.6 40 304-343 84-124 (256)
158 PF13344 Hydrolase_6: Haloacid 86.2 0.71 1.5E-05 40.4 3.2 47 297-343 7-56 (101)
159 COG0241 HisB Histidinol phosph 84.9 4.2 9E-05 39.5 8.0 46 431-476 89-144 (181)
160 PRK09456 ?-D-glucose-1-phospha 83.1 2.6 5.5E-05 41.9 6.1 30 304-333 84-113 (199)
161 PLN02177 glycerol-3-phosphate 80.7 23 0.0005 40.5 13.2 119 439-572 174-292 (497)
162 TIGR01458 HAD-SF-IIA-hyp3 HAD- 80.7 2.9 6.3E-05 43.5 5.6 47 297-343 10-63 (257)
163 PRK10444 UMP phosphatase; Prov 80.4 2.1 4.4E-05 44.3 4.4 45 297-341 10-54 (248)
164 COG1877 OtsB Trehalose-6-phosp 80.0 49 0.0011 34.4 14.2 169 299-474 35-218 (266)
165 PLN02645 phosphoglycolate phos 79.4 3.3 7.2E-05 44.4 5.7 48 297-344 37-87 (311)
166 TIGR01684 viral_ppase viral ph 78.4 3 6.6E-05 43.6 4.7 41 305-345 146-187 (301)
167 COG2179 Predicted hydrolase of 78.4 6.1 0.00013 37.5 6.2 39 305-343 47-85 (175)
168 TIGR01457 HAD-SF-IIA-hyp2 HAD- 77.8 4.6 9.9E-05 41.8 6.0 48 297-344 10-60 (249)
169 PF09419 PGP_phosphatase: Mito 76.4 10 0.00023 36.4 7.5 43 301-343 56-107 (168)
170 PF03767 Acid_phosphat_B: HAD 75.7 6.3 0.00014 40.2 6.2 30 303-332 114-143 (229)
171 PF06570 DUF1129: Protein of u 75.7 60 0.0013 32.4 13.2 22 670-691 151-172 (206)
172 TIGR01993 Pyr-5-nucltdase pyri 74.3 8.3 0.00018 37.5 6.6 38 304-344 84-121 (184)
173 PRK10725 fructose-1-P/6-phosph 73.7 8.7 0.00019 37.4 6.6 35 309-344 92-126 (188)
174 PHA03398 viral phosphatase sup 73.4 4.8 0.0001 42.2 4.7 40 305-344 148-188 (303)
175 TIGR01689 EcbF-BcbF capsule bi 70.8 3.7 8E-05 37.4 2.8 33 303-335 23-55 (126)
176 COG1011 Predicted hydrolase (H 69.6 54 0.0012 32.8 11.6 40 304-344 99-138 (229)
177 COG0637 Predicted phosphatase/ 69.1 20 0.00042 36.3 8.1 43 303-345 85-127 (221)
178 TIGR01458 HAD-SF-IIA-hyp3 HAD- 68.3 23 0.00049 36.8 8.5 53 453-505 195-254 (257)
179 PRK10748 flavin mononucleotide 66.8 29 0.00063 35.4 8.9 27 304-331 113-139 (238)
180 TIGR01680 Veg_Stor_Prot vegeta 63.9 32 0.00069 35.8 8.2 31 302-332 143-173 (275)
181 PF05297 Herpes_LMP1: Herpesvi 61.9 2.6 5.6E-05 42.9 0.0 14 707-720 167-180 (381)
182 PF13242 Hydrolase_like: HAD-h 58.9 16 0.00036 29.6 4.3 48 453-500 20-74 (75)
183 TIGR01663 PNK-3'Pase polynucle 58.4 36 0.00079 39.2 8.4 27 305-331 198-224 (526)
184 TIGR02468 sucrsPsyn_pln sucros 58.2 1.6E+02 0.0035 36.8 14.2 65 417-481 925-1002(1050)
185 TIGR01452 PGP_euk phosphoglyco 58.0 13 0.00029 39.0 4.6 49 297-345 11-62 (279)
186 PTZ00445 p36-lilke protein; Pr 56.5 18 0.0004 35.9 4.8 29 305-333 76-104 (219)
187 KOG3040 Predicted sugar phosph 56.4 23 0.00051 34.8 5.4 48 293-340 12-59 (262)
188 COG0647 NagD Predicted sugar p 51.5 22 0.00047 37.1 4.7 44 297-340 17-60 (269)
189 COG3700 AphA Acid phosphatase 51.4 47 0.001 31.8 6.3 28 305-332 115-142 (237)
190 COG4858 Uncharacterized membra 51.2 82 0.0018 30.4 7.9 34 662-695 158-191 (226)
191 PF02261 Asp_decarbox: Asparta 49.5 24 0.00051 31.3 3.8 83 133-264 20-102 (116)
192 cd02067 B12-binding B12 bindin 48.3 67 0.0015 28.6 7.0 80 239-343 22-103 (119)
193 COG0474 MgtA Cation transport 48.0 2E+02 0.0043 36.0 13.1 42 705-747 850-891 (917)
194 cd02071 MM_CoA_mut_B12_BD meth 47.9 55 0.0012 29.5 6.3 80 239-343 22-103 (122)
195 PF13380 CoA_binding_2: CoA bi 43.0 33 0.00071 30.7 4.0 39 305-343 64-103 (116)
196 TIGR01501 MthylAspMutase methy 42.1 73 0.0016 29.4 6.1 80 239-343 24-111 (134)
197 TIGR01493 HAD-SF-IA-v2 Haloaci 40.5 44 0.00096 31.9 4.9 33 304-343 90-122 (175)
198 TIGR01522 ATPase-IIA2_Ca golgi 38.6 2E+02 0.0043 35.8 11.1 20 707-726 821-840 (884)
199 PF12689 Acid_PPase: Acid Phos 38.4 53 0.0011 31.7 4.8 41 304-344 45-86 (169)
200 PLN03140 ABC transporter G fam 37.8 7.8E+02 0.017 32.7 16.6 12 582-593 594-605 (1470)
201 PF12710 HAD: haloacid dehalog 37.5 16 0.00035 35.6 1.2 31 441-471 157-192 (192)
202 TIGR01662 HAD-SF-IIIA HAD-supe 36.7 3.1E+02 0.0068 24.5 9.8 96 231-344 28-126 (132)
203 TIGR02250 FCP1_euk FCP1-like p 36.7 53 0.0011 31.2 4.5 44 300-344 54-97 (156)
204 TIGR01460 HAD-SF-IIA Haloacid 36.6 55 0.0012 33.4 5.0 47 297-343 7-57 (236)
205 PLN03063 alpha,alpha-trehalose 35.1 9.4E+02 0.02 29.6 19.8 44 305-348 533-579 (797)
206 cd06919 Asp_decarbox Aspartate 35.0 79 0.0017 27.9 4.8 83 131-262 17-99 (111)
207 TIGR01106 ATPase-IIC_X-K sodiu 34.3 4.8E+02 0.01 33.0 13.6 30 467-496 676-707 (997)
208 TIGR01517 ATPase-IIB_Ca plasma 33.6 3.6E+02 0.0077 33.9 12.3 30 467-496 661-692 (941)
209 TIGR02230 ATPase_gene1 F0F1-AT 33.0 1.8E+02 0.0039 25.3 6.7 62 665-734 37-98 (100)
210 TIGR00223 panD L-aspartate-alp 32.9 84 0.0018 28.4 4.7 84 131-263 18-101 (126)
211 PRK05449 aspartate alpha-decar 32.7 89 0.0019 28.2 4.8 84 131-263 18-101 (126)
212 PF04341 DUF485: Protein of un 32.3 1.1E+02 0.0023 26.2 5.2 22 671-692 21-42 (91)
213 KOG3109 Haloacid dehalogenase- 31.4 3.7E+02 0.0079 27.1 9.2 128 298-500 93-222 (244)
214 PRK10053 hypothetical protein; 31.2 27 0.00059 31.9 1.5 27 10-36 63-89 (130)
215 PRK10444 UMP phosphatase; Prov 30.8 4.1E+02 0.0089 27.3 10.3 48 453-500 190-244 (248)
216 PF06570 DUF1129: Protein of u 29.4 5.4E+02 0.012 25.5 10.6 9 728-736 193-201 (206)
217 TIGR02251 HIF-SF_euk Dullard-l 28.8 83 0.0018 30.0 4.5 43 300-343 38-80 (162)
218 PLN03140 ABC transporter G fam 28.5 1.3E+03 0.029 30.5 16.5 18 583-601 1273-1290(1470)
219 PRK08508 biotin synthase; Prov 28.3 4E+02 0.0088 27.9 10.0 38 309-346 101-154 (279)
220 TIGR00676 fadh2 5,10-methylene 27.8 2.7E+02 0.0058 29.1 8.4 42 291-332 57-99 (272)
221 TIGR02370 pyl_corrinoid methyl 27.8 1.3E+02 0.0029 29.7 5.9 78 239-343 107-187 (197)
222 PF09586 YfhO: Bacterial membr 27.8 6.7E+02 0.015 30.9 13.4 30 542-572 131-160 (843)
223 TIGR00640 acid_CoA_mut_C methy 27.5 1.4E+02 0.003 27.4 5.5 80 239-343 25-106 (132)
224 cd02070 corrinoid_protein_B12- 27.0 1.4E+02 0.003 29.6 5.9 78 239-343 105-185 (201)
225 COG5012 Predicted cobalamin bi 26.7 82 0.0018 31.6 4.0 79 240-343 128-207 (227)
226 PF08645 PNK3P: Polynucleotide 26.2 58 0.0013 31.0 2.9 24 306-329 31-54 (159)
227 PRK02261 methylaspartate mutas 25.8 1.9E+02 0.0042 26.7 6.2 80 239-343 26-113 (137)
228 cd05017 SIS_PGI_PMI_1 The memb 25.3 98 0.0021 27.6 4.1 35 306-342 56-90 (119)
229 PTZ00413 lipoate synthase; Pro 25.1 5.1E+02 0.011 28.6 9.8 55 289-343 190-253 (398)
230 TIGR01454 AHBA_synth_RP 3-amin 25.0 5.6E+02 0.012 25.0 10.0 39 305-344 130-170 (205)
231 PF09726 Macoilin: Transmembra 24.4 1.7E+02 0.0037 35.1 6.9 15 643-657 76-90 (697)
232 PF06941 NT5C: 5' nucleotidase 24.4 64 0.0014 31.6 2.9 29 304-332 73-101 (191)
233 TIGR00156 conserved hypothetic 24.3 42 0.00092 30.5 1.4 26 11-36 60-85 (126)
234 TIGR00956 3a01205 Pleiotropic 24.0 1.8E+03 0.038 29.3 17.5 41 306-346 245-286 (1394)
235 TIGR01459 HAD-SF-IIA-hyp4 HAD- 23.6 1.1E+02 0.0024 31.2 4.6 23 455-477 214-237 (242)
236 cd05013 SIS_RpiR RpiR-like pro 23.5 5.2E+02 0.011 22.9 9.4 30 307-336 74-103 (139)
237 cd03409 Chelatase_Class_II Cla 23.4 2.1E+02 0.0045 24.3 5.7 29 298-326 36-65 (101)
238 TIGR02244 HAD-IG-Ncltidse HAD 23.4 1.1E+02 0.0024 33.2 4.6 37 306-342 186-223 (343)
239 KOG2882 p-Nitrophenyl phosphat 23.3 1.4E+02 0.0031 31.3 5.2 47 297-343 31-80 (306)
240 PF03579 SHP: Small hydrophobi 23.0 1.1E+02 0.0023 23.4 3.0 28 660-687 11-38 (64)
241 TIGR02826 RNR_activ_nrdG3 anae 23.0 1.2E+02 0.0026 28.4 4.3 48 294-342 63-111 (147)
242 PF02219 MTHFR: Methylenetetra 22.7 1.6E+02 0.0035 31.1 5.7 44 290-333 68-112 (287)
243 TIGR03351 PhnX-like phosphonat 22.0 6.1E+02 0.013 25.0 9.7 38 306-344 145-185 (220)
244 cd02072 Glm_B12_BD B12 binding 21.8 2.3E+02 0.005 25.9 5.7 80 239-343 22-109 (128)
245 COG0279 GmhA Phosphoheptose is 21.7 83 0.0018 30.0 2.8 32 307-338 123-154 (176)
246 cd05014 SIS_Kpsf KpsF-like pro 21.5 73 0.0016 28.6 2.5 33 306-338 60-92 (128)
247 PF05822 UMPH-1: Pyrimidine 5' 21.4 1.3E+02 0.0029 30.8 4.5 49 303-351 89-137 (246)
248 KOG4050 Glutamate transporter 21.0 3.1E+02 0.0066 25.9 6.2 43 490-532 22-64 (188)
249 KOG1504 Ornithine carbamoyltra 20.8 1.2E+02 0.0026 31.0 3.8 44 436-479 167-217 (346)
250 PRK10263 DNA translocase FtsK; 20.7 1.9E+03 0.04 28.6 14.6 10 639-648 77-86 (1355)
251 PF05297 Herpes_LMP1: Herpesvi 20.4 34 0.00073 35.1 0.0 12 708-719 133-144 (381)
No 1
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1.3e-145 Score=1268.62 Aligned_cols=729 Identities=60% Similarity=0.988 Sum_probs=661.0
Q ss_pred CCcCCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhh
Q 003824 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE 80 (793)
Q Consensus 1 my~~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (793)
|||+++++++.+|+++++|+||||+||+||||||||+|.|+|++|+++|..|+...++.+....++.+.. .
T Consensus 364 my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~---------~ 434 (1151)
T KOG0206|consen 364 MYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGD---------V 434 (1151)
T ss_pred hhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCcccccc---------c
Confidence 8999999999999999999999999999999999999999999999999999988766433332221111 0
Q ss_pred cccccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeec
Q 003824 81 DKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERT 160 (793)
Q Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~ 160 (793)
.....+++.|.|+++.++.+...+..+..++|++++|+||++.++.+++.+++.|+++||||.|||++|+++|+.+..|+
T Consensus 435 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt 514 (1151)
T KOG0206|consen 435 NEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRT 514 (1151)
T ss_pred cccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeecc
Confidence 11335678899999999999888899999999999999999999987666689999999999999999999999999999
Q ss_pred CceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHH
Q 003824 161 QTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEY 240 (793)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~ 240 (793)
++.+++...+ .+++|++|+++||+|.|||||||||+|+|+++|||||||++|++++...+....+.+.+|+++|
T Consensus 515 ~~~vti~~~g------~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~y 588 (1151)
T KOG0206|consen 515 PDSVTIRELG------VEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEY 588 (1151)
T ss_pred CceEEEeccc------cceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHH
Confidence 9999999555 2489999999999999999999999999999999999999999999988888999999999999
Q ss_pred HhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcC
Q 003824 241 ADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAG 320 (793)
Q Consensus 241 ~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~ag 320 (793)
|.+|+||||+|||+++++||++|.++|.+|++++ .||+++++++++.+|+||+++|.|||||+||+||||+|+.|++||
T Consensus 589 A~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~-~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AG 667 (1151)
T KOG0206|consen 589 ATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSL-TDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAG 667 (1151)
T ss_pred HhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhc-cCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcC
Confidence 9999999999999999999999999999999999 699999999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCC
Q 003824 321 IKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGP 400 (793)
Q Consensus 321 Ikv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (793)
||+||||||+.|||++||++|+++++++..+.++..+.+.... .+... ...+.+..+.............. ..
T Consensus 668 IKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~-----~~~~~-~~~~~l~~~~~~~~~~~~~~~~~-~~ 740 (1151)
T KOG0206|consen 668 IKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSS-----LDATA-ALKETLLRKFTEELEEAKLEHSE-KP 740 (1151)
T ss_pred CEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcc-----hhhHH-HHHHHHHHhhhHHHHHHhhccCc-CC
Confidence 9999999999999999999999999999999998877541111 11111 22233333332222221111111 36
Q ss_pred eEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEec
Q 003824 401 LALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGIS 480 (793)
Q Consensus 401 ~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~ 480 (793)
.+++|||+++.++++++.+..|..++..|++|+|||+||.||+.+|+++|+..+.+|+|||||+||++|||+|||||||+
T Consensus 741 ~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIs 820 (1151)
T KOG0206|consen 741 FALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGIS 820 (1151)
T ss_pred ceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeec
Confidence 89999999999999998889999999999999999999999999999999878999999999999999999999999999
Q ss_pred cCCcccccccCCeeecchhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHHHHHHh
Q 003824 481 GVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVF 560 (793)
Q Consensus 481 g~~~~~a~~~aD~~i~~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~ 560 (793)
|.||+||.++|||++.+|++|.+||++||||+|.|++++++|+||||+++++++|||+++++|||+++|++|++.+||++
T Consensus 821 G~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~ 900 (1151)
T KOG0206|consen 821 GQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVL 900 (1151)
T ss_pred cchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCceeehhh
Q 003824 561 FTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEI 640 (793)
Q Consensus 561 ~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~g~~~~~~~ 640 (793)
||++|++++|++|||++++.++++|+||+.++++..|+++.|+.|++.|++|++++|++++..+.......+|.+.+.+.
T Consensus 901 FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~ 980 (1151)
T KOG0206|consen 901 FTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWT 980 (1151)
T ss_pred eecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheeeeeccCCCcCChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999887667778999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhccCccccc-hhHHHHHHHhccChHHHHHHHHHH
Q 003824 641 LGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYIST-TAYKVFIEACAPAPSFWLITLLVL 719 (793)
Q Consensus 641 ~~t~~f~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~-~~~~~~~~~~~~s~~~wl~~l~~~ 719 (793)
+|+.+||++|+++++++++.+++|+|++|+.+|+|+++||++.++|...++.+.. ..+..++.....+|.+|+.+++++
T Consensus 981 ~G~~~~T~~Vivv~~~iaL~~~ywT~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~ 1060 (1151)
T KOG0206|consen 981 LGTTVFTIIVIVVNLKIALETSYWTWINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTV 1060 (1151)
T ss_pred ccceEEEEEEEEEEeeeeeeehheeHHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999864433333 445557778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCC
Q 003824 720 MSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQ 752 (793)
Q Consensus 720 ~~~ll~~~i~k~~~~~~~p~~~~i~~e~~~~~~ 752 (793)
++|++|+++++.+++.++|++++++||+++.++
T Consensus 1061 v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~~~~~ 1093 (1151)
T KOG0206|consen 1061 VAALLPDFVYKSLQRTFFPTDHDIIQEIEKYRR 1093 (1151)
T ss_pred HHHHhHHHHHHHHHHhhCCcHHHHHHHHHhccc
Confidence 999999999999999999999999999997543
No 2
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1.2e-125 Score=1142.87 Aligned_cols=720 Identities=39% Similarity=0.624 Sum_probs=606.5
Q ss_pred CCcCCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhh
Q 003824 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE 80 (793)
Q Consensus 1 my~~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (793)
|||+++++++.||+++++|+||||+|||||||||||+|+|+|++|+++|..|+.+....+..... .....+ .
T Consensus 430 m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~-~~~~~~-------~ 501 (1178)
T PLN03190 430 MYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAG-YSVEVD-------G 501 (1178)
T ss_pred cccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhc-cccccc-------c
Confidence 89999999999999999999999999999999999999999999999999997532211111000 000000 0
Q ss_pred cccccCCCCcCchhhhcCCC--CCCCchHHHHHHHHHHHhhccccccccCC--C---CceeeecCCccHHHHHHHHHHcC
Q 003824 81 DKASIKGFNFEDERIMNGSW--VNEPHADVIQKFLRLLAICHTALPEVDEE--N---GKISYEAESPDEAAFVIAARELG 153 (793)
Q Consensus 81 ~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~lalc~~~~~~~~~~--~---~~~~y~~~sp~E~Alv~~a~~~g 153 (793)
.........+.|+.+.+... ...+..+.+++|++++++||++.++..++ . +.++|+|+||||.||+++|+++|
T Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G 581 (1178)
T PLN03190 502 KILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYG 581 (1178)
T ss_pred ccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCC
Confidence 00000000112333322111 11122345789999999999999853211 1 24679999999999999999999
Q ss_pred CEEEeecCceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhc-chhhHHH
Q 003824 154 FEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN-GREFEEQ 232 (793)
Q Consensus 154 ~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~-~~~~~~~ 232 (793)
+.+..|+++.+.+...+.. .+|++++++||+|+|||||||++++++++++||||||++|+++|... +...++.
T Consensus 582 ~~l~~r~~~~i~i~~~~~~------~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~ 655 (1178)
T PLN03190 582 FMLIERTSGHIVIDIHGER------QRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRA 655 (1178)
T ss_pred CeEecccCCeEEEeeccce------ecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHH
Confidence 9999999999988877654 78999999999999999999999998999999999999999999764 3356778
Q ss_pred HHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHH
Q 003824 233 TKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPEC 312 (793)
Q Consensus 233 ~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~ 312 (793)
+.+++++|+.+|+||||+|||+++++|+++|.++|++|+.++ .+|++.+++..+++|+||+++|+++++|+||++++++
T Consensus 656 ~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~ 734 (1178)
T PLN03190 656 TEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEA 734 (1178)
T ss_pred HHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhh-hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHH
Confidence 899999999999999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhh---hh
Q 003824 313 IDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRG---KE 389 (793)
Q Consensus 313 I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 389 (793)
|+.|++|||++||+|||+.+||++||++|||+++++..+.++.+..+. ....+....... .+.... .+
T Consensus 735 I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~-------~~~~l~~~~~~~--~~~~~~~~~~~ 805 (1178)
T PLN03190 735 IESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKES-------CRKSLEDALVMS--KKLTTVSGISQ 805 (1178)
T ss_pred HHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhh-------HHHHHHHHhhhh--hhccccccccc
Confidence 999999999999999999999999999999999998888886654221 111111111000 000000 00
Q ss_pred c-cccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChh
Q 003824 390 L-LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVG 468 (793)
Q Consensus 390 ~-~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ 468 (793)
. ...........+++++|.++..++++++.+.|.+++..|++|||||++|+||++||+++|+..+++|+|||||+||++
T Consensus 806 ~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~ 885 (1178)
T PLN03190 806 NTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVS 885 (1178)
T ss_pred cccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHH
Confidence 0 000112245678999999999999888888999999999999999999999999999999855689999999999999
Q ss_pred hhhhcceeEEeccCCcccccccCCeeecchhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCccc
Q 003824 469 MLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPV 548 (793)
Q Consensus 469 ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~ 548 (793)
|||+|||||||+|+||.||+++|||++.+|++|.+||++||||+|.|++.+++|+||||+++++++|||+++++|||+++
T Consensus 886 mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~l 965 (1178)
T PLN03190 886 MIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTA 965 (1178)
T ss_pred HHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 003824 549 YNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQA 628 (793)
Q Consensus 549 ~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 628 (793)
|++|.+++||++||++|++++|++|+|++++.++++|+||+.+++++.++.+.|+.|++.|+|||+++|+++++.+...
T Consensus 966 y~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~~~~~- 1044 (1178)
T PLN03190 966 INEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFAYWAS- 1044 (1178)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988776532
Q ss_pred ccCCCceeehhhHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccC
Q 003824 629 FRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPA 708 (793)
Q Consensus 629 ~~~~g~~~~~~~~~t~~f~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s 708 (793)
..+.+.+++++++++++++|+++++.+++|+|+++..+|+|+++++++.+++..+|. +. .|+.++ .+..+
T Consensus 1045 ------~~~~~~~~~~~~~~~v~~vnl~i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~~~~~-~~--~~~~~~-~~~~~ 1114 (1178)
T PLN03190 1045 ------TIDGSSIGDLWTLAVVILVNLHLAMDIIRWNWITHAAIWGSIVATFICVIVIDAIPT-LP--GYWAIF-HIAKT 1114 (1178)
T ss_pred ------CcCceeEhHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-ch--hHHHHH-HHhcc
Confidence 123345678888999999999999999999999999999999999999988887763 22 245344 56679
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCCCC
Q 003824 709 PSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDD 755 (793)
Q Consensus 709 ~~~wl~~l~~~~~~ll~~~i~k~~~~~~~p~~~~i~~e~~~~~~~~~ 755 (793)
|.||+.++++++++++|+++++++++.|+|..++++||.++....++
T Consensus 1115 ~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~ 1161 (1178)
T PLN03190 1115 GSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAREAEKFGTFRE 1161 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999776654333
No 3
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=5.6e-118 Score=1089.52 Aligned_cols=719 Identities=53% Similarity=0.877 Sum_probs=613.6
Q ss_pred CCcCCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhh
Q 003824 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE 80 (793)
Q Consensus 1 my~~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (793)
||+++++++++||+++++|+||+|+|||||||||||+|+|+|++|+++|..|+....+......+..+...+... .
T Consensus 336 m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~----~ 411 (1057)
T TIGR01652 336 MYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENEN----S 411 (1057)
T ss_pred hhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccc----c
Confidence 677888889999999999999999999999999999999999999999999986544322221111110000000 0
Q ss_pred cccccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccc-cCCCCceeeecCCccHHHHHHHHHHcCCEEEee
Q 003824 81 DKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEV-DEENGKISYEAESPDEAAFVIAARELGFEFYER 159 (793)
Q Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~-~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r 159 (793)
.....+..+|.++++.+......+..+.+.+|++++++||++.++. +++.+.+.|+++||+|.||+++|+.+|+.+.+|
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~ 491 (1057)
T TIGR01652 412 MLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFER 491 (1057)
T ss_pred ccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEe
Confidence 0001122455666655433223344566889999999999999875 233345889999999999999999999999999
Q ss_pred cCcee--EEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHH
Q 003824 160 TQTSI--SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHI 237 (793)
Q Consensus 160 ~~~~~--~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~ 237 (793)
+.+.+ .+...+. ...|++++++||||+|||||||++++++++++|+||||++|+++|...+++.++.+.+++
T Consensus 492 ~~~~~~~~i~~~~~------~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~ 565 (1057)
T TIGR01652 492 TPKSISLLIEMHGE------TKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHL 565 (1057)
T ss_pred cCCceEEEEEeCCC------EEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHH
Confidence 98844 3443333 378999999999999999999999998899999999999999999865456678889999
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHH
Q 003824 238 NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLA 317 (793)
Q Consensus 238 ~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~ 317 (793)
++|+.+|+|||++|||.++++|+++|.++|++|+.++ .+|++.+++.++.+|+||+|+|++|+|||||++|+++|+.|+
T Consensus 566 ~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~ 644 (1057)
T TIGR01652 566 ENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL-TDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLR 644 (1057)
T ss_pred HHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHH
Confidence 9999999999999999999999999999999999998 799999999999999999999999999999999999999999
Q ss_pred HcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCC
Q 003824 318 QAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNES 397 (793)
Q Consensus 318 ~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (793)
+||||+||+|||+.+||++||++||++.++...+.+++++.+... .....+.. +......... ....
T Consensus 645 ~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~----~~~~~i~~--------~~~~~~~~~~-~~~~ 711 (1057)
T TIGR01652 645 QAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATR----SVEAAIKF--------GLEGTSEEFN-NLGD 711 (1057)
T ss_pred HCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhH----HHHHHHHH--------HHHHHHHhhh-hhcc
Confidence 999999999999999999999999999988887777765422110 00011111 1110000010 0112
Q ss_pred CCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeE
Q 003824 398 LGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGV 477 (793)
Q Consensus 398 ~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI 477 (793)
....+++++|++++.+++++++++|.+++..|+++||||++|+||+++|+++|+..|++|+|||||+||++|||+|||||
T Consensus 712 ~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGI 791 (1057)
T TIGR01652 712 SGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV 791 (1057)
T ss_pred CCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeee
Confidence 45678999999999999888888999999999999999999999999999999844999999999999999999999999
Q ss_pred EeccCCcccccccCCeeecchhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHHHH
Q 003824 478 GISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLY 557 (793)
Q Consensus 478 ~i~g~~~~~a~~~aD~~i~~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~ 557 (793)
|++|+|+.||+++|||++.+|++|.+++++|||++|.|+++++.|.||||+++++++|||.++++|||+++|++|+++||
T Consensus 792 gi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~ 871 (1057)
T TIGR01652 792 GISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLY 871 (1057)
T ss_pred EecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCceee
Q 003824 558 NVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIG 637 (793)
Q Consensus 558 n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~g~~~~ 637 (793)
|+++|++|++++|++|+|++++.++++|++|+.+++++.++.+.|+.|++.|++|++++|++.++.+.......+|...+
T Consensus 872 n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~ 951 (1057)
T TIGR01652 872 NVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSLDD 951 (1057)
T ss_pred HHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999888876544446788889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHH
Q 003824 638 LEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLL 717 (793)
Q Consensus 638 ~~~~~t~~f~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~ 717 (793)
.+.+++++|+++++++|+++++.+++|+|+++..+|+|+++++++.+++..++. +...|+. +.....+|.+|+.+++
T Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~~~~~wt~~~~~~~~~S~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~s~~f~l~~ll 1028 (1057)
T TIGR01652 952 FSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFVIVYSSIFP--SPAFYKA-APRVMGTFGFWLVLLV 1028 (1057)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcc--cccHHHH-HHHHHccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999888875542 3445553 4467789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Q 003824 718 VLMSSLLPYFTYSAIQMRFFPLHHQMIQW 746 (793)
Q Consensus 718 ~~~~~ll~~~i~k~~~~~~~p~~~~i~~e 746 (793)
+++++++|+++++++++.|+|+.++++||
T Consensus 1029 ~~~~~l~p~~~~~~~~~~~~P~~~~~i~~ 1057 (1057)
T TIGR01652 1029 IVLISLLPRFTYKAIQRLFRPPDYDIVQE 1057 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHhhC
Confidence 99999999999999999999999999875
No 4
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.9e-108 Score=871.06 Aligned_cols=657 Identities=32% Similarity=0.509 Sum_probs=568.3
Q ss_pred CCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccH-HHHHHHhhcCCCCccchhhhhhcccccC
Q 003824 8 KPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTE-VERAMARRKGSPLEEEVTEEQEDKASIK 86 (793)
Q Consensus 8 ~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (793)
.+..+|++++.|+||+|.|+.+|||||||+|+|.|++++.+...|+.+..+ ++....+-.+.+. ...+
T Consensus 391 pgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~-----------~~~~ 459 (1051)
T KOG0210|consen 391 PGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGR-----------NKGK 459 (1051)
T ss_pred CceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCc-----------cccc
Confidence 578999999999999999999999999999999999999999999865433 2222211111000 0000
Q ss_pred CCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCceeEE
Q 003824 87 GFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISV 166 (793)
Q Consensus 87 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i 166 (793)
.. ......+-....++..+++|+||+|.|..++ +|++.||+.||||.|||++.+..|..+..|+.+.+++
T Consensus 460 ~~---------~~~~k~~~s~rv~~~V~alalCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL 529 (1051)
T KOG0210|consen 460 GA---------LSRVKKDMSARVRNAVLALALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITL 529 (1051)
T ss_pred cc---------chhhcCcccHHHHHHHHHHHHhccCCcccCC-CceEEeecCCCCeEEEEEeeeecceEEeecccceEEE
Confidence 00 0111234556788999999999999998754 4789999999999999999999999999999999999
Q ss_pred EecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcC-CCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhccc
Q 003824 167 HELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE-EGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGL 245 (793)
Q Consensus 167 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~ 245 (793)
..++.. ...|+||.++||+|++|||.+|||++ .+++..|.||||.+|-.....+ +.+++...+||++|+
T Consensus 530 ~~~~~~-----~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N-----dWleEE~gNMAREGL 599 (1051)
T KOG0210|consen 530 RVPLDD-----ELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN-----DWLEEECGNMAREGL 599 (1051)
T ss_pred ecCCCc-----ceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc-----hhhhhhhhhhhhhcc
Confidence 887554 58999999999999999999999997 7899999999999998776544 467788899999999
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHH-HhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEE
Q 003824 246 RTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAE-KIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 324 (793)
Q Consensus 246 r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~-~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~ 324 (793)
|||++|+|.++++||+.|.+.|++|+.++ .||++++.++.+ .+|+||.++|++|+||+||++|+.+++.||+||||||
T Consensus 600 RtLVvakK~Ls~~eye~Fe~~y~~A~lSi-~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiW 678 (1051)
T KOG0210|consen 600 RTLVVAKKVLSEEEYEAFEEAYNAAKLSI-SDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIW 678 (1051)
T ss_pred eEEEEEecccCHHHHHHHHHHHHhhhCcc-chHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEE
Confidence 99999999999999999999999999999 899999999877 8999999999999999999999999999999999999
Q ss_pred EEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEE
Q 003824 325 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALI 404 (793)
Q Consensus 325 mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 404 (793)
|||||+.|||+.||++.+++..+..+.++..-...... .+.+.. + ....+.+|+
T Consensus 679 MLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~da------h~eL~~----------------l----R~k~~~aLv 732 (1051)
T KOG0210|consen 679 MLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDA------HNELNN----------------L----RRKTDCALV 732 (1051)
T ss_pred EEcCcchhheeeeehhccceecCceEEEEEecCCchHH------HHHHHH----------------h----hcCCCcEEE
Confidence 99999999999999999999999888887765432111 111110 0 245678999
Q ss_pred EeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCCc
Q 003824 405 IDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEG 484 (793)
Q Consensus 405 i~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~ 484 (793)
|+|++++..++ .+.+.|.++.+.|.+|||||++|.||+++++++|++.++.|++||||.||++|||+||+||||.|+||
T Consensus 733 i~G~Sl~~cl~-yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEG 811 (1051)
T KOG0210|consen 733 IDGESLEFCLK-YYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEG 811 (1051)
T ss_pred EcCchHHHHHH-HHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccc
Confidence 99999997776 67888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCeeecchhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHHHHHHhhccc
Q 003824 485 MQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSL 564 (793)
Q Consensus 485 ~~a~~~aD~~i~~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~l 564 (793)
.||..||||.|.+|.++.+||++|||.+|.|..++-+|.+.+.+.+..++.+|+....|.+.++|..+.+..|..++|.+
T Consensus 812 kQASLAADfSItqF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTml 891 (1051)
T KOG0210|consen 812 KQASLAADFSITQFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTML 891 (1051)
T ss_pred cccchhccccHHHHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCceeehhhHHHH
Q 003824 565 PVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTT 644 (793)
Q Consensus 565 p~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~g~~~~~~~~~t~ 644 (793)
|++.+ +.|+|++++..+.+|+||+.-.+++.++.+.|+.|++.++||+.++.++++..+.. ++..+.++
T Consensus 892 PVFSl-v~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~----------ef~~ivai 960 (1051)
T KOG0210|consen 892 PVFSL-VLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDT----------EFIHIVAI 960 (1051)
T ss_pred hhhee-eecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhh----------hheEeeee
Confidence 99999 67999999999999999999999999999999999999999999999887666543 22345578
Q ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHH
Q 003824 645 MYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLL 724 (793)
Q Consensus 645 ~f~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll 724 (793)
.|+++++...+++++..++|+|.....-..+++++++.+.+.. .+ +-.....++.|+.-+.++.+++++
T Consensus 961 sFtaLi~tELiMVaLtv~tw~~~m~vae~lsL~~Yivsl~~l~-------~y----fd~~f~~~~~Fl~k~t~I~~vS~L 1029 (1051)
T KOG0210|consen 961 SFTALILTELIMVALTVRTWHWLMVVAELLSLALYIVSLAFLH-------EY----FDRYFILTYVFLWKVTVITLVSCL 1029 (1051)
T ss_pred eeHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH-------hH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999987777777777766544322 10 111223567777777888899999
Q ss_pred HHHHHHHHHHHhCCCHHHHHH
Q 003824 725 PYFTYSAIQMRFFPLHHQMIQ 745 (793)
Q Consensus 725 ~~~i~k~~~~~~~p~~~~i~~ 745 (793)
|.++.|+++|.+.|+.|-+++
T Consensus 1030 pl~~~K~lrrk~sPpSYaKl~ 1050 (1051)
T KOG0210|consen 1030 PLYFIKALRRKLSPPSYAKLQ 1050 (1051)
T ss_pred HHHHHHHHHhhcCCcchhhcc
Confidence 999999999999999998765
No 5
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-86 Score=793.65 Aligned_cols=556 Identities=31% Similarity=0.461 Sum_probs=444.7
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.+++++||+++++|+||++++||||||||||||+|+|++|++.+. +.+.+.
T Consensus 328 ~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~--~~~~~~------------------------- 380 (917)
T COG0474 328 RMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG--GKDIDD------------------------- 380 (917)
T ss_pred HHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCC--cccccc-------------------------
Confidence 45788999999999999999999999999999999999999999851 000000
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
......+...+++.++++||++.+..+ + .+..+||+|.||++++.+.|+.+ .+
T Consensus 381 -----------------~~~~~~~~~~~~l~~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~a~~~~~~~-~~---- 433 (917)
T COG0474 381 -----------------KDLKDSPALLRFLLAAALCNSVTPEKN-G----WYQAGDPTEGALVEFAEKLGFSL-DL---- 433 (917)
T ss_pred -----------------cccccchHHHHHHHHHHhcCccccccc-C----ceecCCccHHHHHHHHHhcCCcC-CH----
Confidence 000123345589999999999988755 3 66789999999999999999744 10
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhh------cchhhHHHHHHHH
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAE------NGREFEEQTKEHI 237 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~~ 237 (793)
......|++++.+||||+|||||||++..++++++++|||||+|+++|+. ..++.++.+.+..
T Consensus 434 -----------~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~ 502 (917)
T COG0474 434 -----------SGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAV 502 (917)
T ss_pred -----------HHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHH
Confidence 01236678999999999999999999977788999999999999999985 2456788899999
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHH
Q 003824 238 NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLA 317 (793)
Q Consensus 238 ~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~ 317 (793)
++|+.+|+|||++|||.++.++. +. .. +.+|+||+|+|+++++||||++|+++|+.|+
T Consensus 503 ~~la~~glRvla~A~k~~~~~~~----------------~~-----~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~ 560 (917)
T COG0474 503 KELASEGLRVLAVAYKKLDRAEK----------------DD-----EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELR 560 (917)
T ss_pred HHHHHHHHHHHHHHhccCCcccc----------------cc-----hh-hhhhccceeehhhhccCCCCccHHHHHHHHH
Confidence 99999999999999997765431 11 11 6789999999999999999999999999999
Q ss_pred HcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCC
Q 003824 318 QAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNES 397 (793)
Q Consensus 318 ~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (793)
+|||++||+|||+.+||.+||++||+..+..
T Consensus 561 ~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~------------------------------------------------- 591 (917)
T COG0474 561 EAGIKVWMITGDHVETAIAIAKECGIEAEAE------------------------------------------------- 591 (917)
T ss_pred HCCCcEEEECCCCHHHHHHHHHHcCCCCCCC-------------------------------------------------
Confidence 9999999999999999999999999754321
Q ss_pred CCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeE
Q 003824 398 LGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGV 477 (793)
Q Consensus 398 ~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI 477 (793)
. .++++|..++.+.++++.+.+. .+. ||||+||+||.+||+.+|+ .|++|+|+|||+||+||||+|||||
T Consensus 592 --~-~~vi~G~el~~l~~~el~~~~~----~~~--VfARvsP~qK~~IV~~lq~-~g~vVamtGDGvNDapALk~ADVGI 661 (917)
T COG0474 592 --S-ALVIDGAELDALSDEELAELVE----ELS--VFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDAPALKAADVGI 661 (917)
T ss_pred --c-eeEeehHHhhhcCHHHHHHHhh----hCc--EEEEcCHHHHHHHHHHHHh-CCCEEEEeCCCchhHHHHHhcCccE
Confidence 0 5699999999888765444444 444 9999999999999999999 7999999999999999999999999
Q ss_pred EeccCCcccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHH
Q 003824 478 GISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLS 555 (793)
Q Consensus 478 ~i~g~~~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l 555 (793)
||+++....|+++||+++.+.++ +..+ ++|||++|.|+++++.|.+++|+..+++++++.++..+ ..+|+++|++
T Consensus 662 amg~~Gtdaak~Aadivl~dd~~~~i~~a-v~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~--~~p~~~~qll 738 (917)
T COG0474 662 AMGGEGTDAAKEAADIVLLDDNFATIVLA-VVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF--FLPLTPLQLL 738 (917)
T ss_pred EecccHHHHHHhhcceEeecCcHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccHHHHHHH
Confidence 99653333388999999998666 4444 99999999999999999999999999999999988766 5679999999
Q ss_pred HHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCCc
Q 003824 556 LYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAF-RKGGE 634 (793)
Q Consensus 556 ~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~-~~~g~ 634 (793)
|+|++++++|++++++++ ++...+++|+ ++++..+|+++.++.|++...+++++++++.+..+..... ...+.
T Consensus 739 ~inll~d~~pa~~L~~~~---~~~~~m~~~~---~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 812 (917)
T COG0474 739 WINLLTDSLPALALGVED---PESDVMKRPP---RGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGL 812 (917)
T ss_pred HHHHHHhhhhhheeecCC---CcccccccCC---CCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 999999999999999976 4455555553 4788999999999999888888888887777665543221 11121
Q ss_pred eeehhhHHHHHHHHHHHHHHHHHHHHhcch----h--hHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccC
Q 003824 635 VIGLEILGTTMYTCVVWVVNCQMALSVTYF----T--YIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPA 708 (793)
Q Consensus 635 ~~~~~~~~t~~f~~~v~~~~~~~~l~~~~~----~--~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s 708 (793)
........+++|+.+++++.+..+.....| + ++.+..+|+++++..++.++..++|..... .|...+.+
T Consensus 813 ~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~-----~f~~~~~~ 887 (917)
T COG0474 813 DLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLK-----IFQPTPLS 887 (917)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhh-----hccCCCCc
Confidence 112446778888888888877766432221 1 236788899888888888888887752112 45566666
Q ss_pred hHHHHHHHHHH
Q 003824 709 PSFWLITLLVL 719 (793)
Q Consensus 709 ~~~wl~~l~~~ 719 (793)
...|+.++++.
T Consensus 888 ~~~~~~~~~~~ 898 (917)
T COG0474 888 LFEWLIAIAVA 898 (917)
T ss_pred HHHHHHHHHHH
Confidence 66777766555
No 6
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-86 Score=724.92 Aligned_cols=613 Identities=22% Similarity=0.282 Sum_probs=475.4
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
+|.+++++||++.++|+||.+++||||||||||+|+|.+.++++.+..+... ++. .. .|..
T Consensus 312 rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~-~~f--~~---tg~t------------- 372 (972)
T KOG0202|consen 312 RMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV-DEF--NP---TGTT------------- 372 (972)
T ss_pred HHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc-ccc--cc---CCce-------------
Confidence 5778999999999999999999999999999999999999999977654332 100 00 0000
Q ss_pred ccCCCCcCchhhhcCC--CCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecC
Q 003824 84 SIKGFNFEDERIMNGS--WVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQ 161 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~ 161 (793)
++-.+....+.. .......+.+++++.+.++||.+..+.++. +.++- -|.|+|.||...|+++|+.-...+.
T Consensus 373 ----y~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~-~G~pTE~AL~vlaeKm~l~~~~~~~ 446 (972)
T KOG0202|consen 373 ----YSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDA-DCYEK-VGEPTEGALIVLAEKMGLPGTRSTN 446 (972)
T ss_pred ----eCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHh-cCCchHHHHHHHHHHcCCCcchhhc
Confidence 000011111110 011234567899999999999999887664 33332 3699999999999999986533111
Q ss_pred ceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCc--EEEEEecCchHhHHHHhhc-----------chh
Q 003824 162 TSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGT--LLLLSKGADSVMFERLAEN-----------GRE 228 (793)
Q Consensus 162 ~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~--~~l~~KGa~~~i~~~~~~~-----------~~~ 228 (793)
. .-.+ +..+.+...+.++...++||+|+||+|||.+.++.++ +.+|+|||+|.|+++|+.. ++.
T Consensus 447 ~--s~~~-~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~ 523 (972)
T KOG0202|consen 447 L--SNEE-ASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQA 523 (972)
T ss_pred c--cccc-cccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHH
Confidence 1 0111 2233333446677789999999999999999987664 8999999999999999543 345
Q ss_pred hHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHH--HHHHhhcCceEEEEEeeecccC
Q 003824 229 FEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEE--IAEKIEKNLILLGATAVEDKLQ 306 (793)
Q Consensus 229 ~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~--~~~~ie~~l~~lG~~~ieD~lr 306 (793)
.++.+.+...+++.+|+|||++|+++.+.. ...++.+.+ .+...|+||+|+|++|+.||+|
T Consensus 524 ~re~il~~~~~~g~~gLRvLalA~~~~~~~-----------------~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR 586 (972)
T KOG0202|consen 524 SRETILANVYEMGSEGLRVLALASKDSPGQ-----------------VPDDQDLNDTSNRATAESDLTFVGLVGILDPPR 586 (972)
T ss_pred HHHHHHHHHHHHhhccceEEEEEccCCccc-----------------ChhhhhhcccccccccccceEEEEEeeccCCCc
Confidence 788899999999999999999999987641 011111111 2467799999999999999999
Q ss_pred CChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhh
Q 003824 307 NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIR 386 (793)
Q Consensus 307 ~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (793)
++|+++|+.|++|||+|.|+|||+.+||.+||+++|+...+.+
T Consensus 587 ~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed------------------------------------- 629 (972)
T KOG0202|consen 587 PEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED------------------------------------- 629 (972)
T ss_pred hhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc-------------------------------------
Confidence 9999999999999999999999999999999999998765421
Q ss_pred hhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccC
Q 003824 387 GKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGAND 466 (793)
Q Consensus 387 ~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND 466 (793)
-....++|++++.+..+++..... +..+|+|++|++|.+||+.||+ .|++|+|+|||+||
T Consensus 630 -------------~~~~~~TG~efD~ls~~~~~~~~~------~~~vFaR~~P~HK~kIVeaLq~-~geivAMTGDGVND 689 (972)
T KOG0202|consen 630 -------------VSSMALTGSEFDDLSDEELDDAVR------RVLVFARAEPQHKLKIVEALQS-RGEVVAMTGDGVND 689 (972)
T ss_pred -------------ccccccchhhhhcCCHHHHHHHhh------cceEEEecCchhHHHHHHHHHh-cCCEEEecCCCccc
Confidence 012267888887666555554333 4569999999999999999999 89999999999999
Q ss_pred hhhhhhcceeEEec--cCCcccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhc
Q 003824 467 VGMLQEADIGVGIS--GVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYAS 542 (793)
Q Consensus 467 ~~ml~~AdvGI~i~--g~~~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~ 542 (793)
+|+||.|||||+|+ |++. ||+|||+++.|++| +..+ +.|||.+|.|+++++.|.+..|+..+.++|+...+.
T Consensus 690 ApALK~AdIGIAMG~~GTdV--aKeAsDMVL~DDnFstIvaA-VEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~- 765 (972)
T KOG0202|consen 690 APALKKADIGIAMGISGTDV--AKEASDMVLADDNFSTIVAA-VEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFG- 765 (972)
T ss_pred hhhhhhcccceeecCCccHh--hHhhhhcEEecCcHHHHHHH-HHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhC-
Confidence 99999999999884 6666 99999999999666 7777 899999999999999999999999999988887773
Q ss_pred ccCcccchhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 003824 543 FSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIH 622 (793)
Q Consensus 543 ~s~~~~~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 622 (793)
+ ..+++++|+||+|++++.+|+.++|+++ ++.+.|.+.|+ +++..+++++.|+.++..|+|.++++.+.+.+
T Consensus 766 ~--p~pL~pvQiLWiNlvtDG~PA~aLG~ep--~D~DiM~kpPR----~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~ 837 (972)
T KOG0202|consen 766 I--PEPLIPVQILWINLVTDGPPATALGFEP--VDPDIMKKPPR----DSKDGIITGWLIFRYLAIGIIVGVATVGVFVW 837 (972)
T ss_pred C--CCcccchhhheeeeeccCCchhhcCCCC--CChhHHhCCCC----CCCCCeeeHHHHHHHHHhheeeeeeEhHhhhH
Confidence 2 2569999999999999999999999975 45556666665 78899999999999999999999988877776
Q ss_pred Hhccc--cccCC----------------CceeehhhHHHHHHHHHHHHHHHHHHHHhcchh-------hHHHHHHHHHHH
Q 003824 623 AMKQQ--AFRKG----------------GEVIGLEILGTTMYTCVVWVVNCQMALSVTYFT-------YIQHLFIWGGIT 677 (793)
Q Consensus 623 ~~~~~--~~~~~----------------g~~~~~~~~~t~~f~~~v~~~~~~~~l~~~~~~-------~~~~~~i~~si~ 677 (793)
.+... ....+ ..........|+.++++++.-.+.. +..++++ .|.|.++.++++
T Consensus 838 ~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNa-L~~~se~~slf~~~~~~N~~l~~ai~ 916 (972)
T KOG0202|consen 838 WMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNA-LNCLSENKSLFTMPPWSNRWLLWAIA 916 (972)
T ss_pred HHhcCCCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHH-hhcccCCcceEEecccccHHHHHHHH
Confidence 65531 11000 0000011222667777766554443 4455543 678999999999
Q ss_pred HHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 003824 678 FWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFF 737 (793)
Q Consensus 678 ~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~~ 737 (793)
+.++.++++.|+|+ ++. +|+..++++..|+.++.+....++.++++|++.|.+.
T Consensus 917 ~S~~~~f~ilYvp~-l~~-----iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 917 LSFVLHFLVLYVPP-LQR-----IFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred HHHHhhheEEEech-hhh-----hheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 99999999999997 566 7788999999999999999999999999999999764
No 7
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=8.3e-81 Score=751.89 Aligned_cols=642 Identities=17% Similarity=0.210 Sum_probs=459.5
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCE-eeCCCccHHHHHHHhhcCCCCccchhhhhhcc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGT-SYGRGVTEVERAMARRKGSPLEEEVTEEQEDK 82 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (793)
++.+++++||+++++|+||++++||||||||||+|+|+++++++++. .|.....+.... ...|.... ..+ ...
T Consensus 339 rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~--~~~g~~~~-~~~---~~~ 412 (1053)
T TIGR01523 339 NMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFN--PNEGNVSG-IPR---FSP 412 (1053)
T ss_pred HHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCC--Cccccccc-ccc---ccc
Confidence 46788999999999999999999999999999999999999998752 221100000000 00000000 000 000
Q ss_pred cccCCCCcCchhhhcC-----CCCC---CCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCC
Q 003824 83 ASIKGFNFEDERIMNG-----SWVN---EPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGF 154 (793)
Q Consensus 83 ~~~~~~~~~~~~l~~~-----~~~~---~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~ 154 (793)
.........++++... .... ....+..++++.++++||++....++..+... ..+||+|.||+++|.+.|+
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~-~~GdptE~ALl~~a~~~g~ 491 (1053)
T TIGR01523 413 YEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK-AHGDPTEIAIHVFAKKFDL 491 (1053)
T ss_pred ccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee-eCcCccHHHHHHHHHHcCC
Confidence 0000000000000000 0000 00123567899999999998765432223222 2479999999999999997
Q ss_pred EEEe---------ecCce-eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCC-cEEEEEecCchHhHHHHh
Q 003824 155 EFYE---------RTQTS-ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEG-TLLLLSKGADSVMFERLA 223 (793)
Q Consensus 155 ~~~~---------r~~~~-~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-~~~l~~KGa~~~i~~~~~ 223 (793)
.... +.+.. ..+..... ++....|++++.+||||+|||||++++++++ ++++|+|||||.|+++|+
T Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~ 568 (1053)
T TIGR01523 492 PHNALTGEEDLLKSNENDQSSLSQHNE---KPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCS 568 (1053)
T ss_pred Ccccccchhhhhhhccccccccccccc---cccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhh
Confidence 4210 00000 00110000 0112568999999999999999999997654 589999999999999997
Q ss_pred hc-----------chhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcC
Q 003824 224 EN-----------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKN 292 (793)
Q Consensus 224 ~~-----------~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~ 292 (793)
.. +++.++.+.+.+++|+++|+|||++|||.++.+++..+ .+.. .. .+ .+.+|+|
T Consensus 569 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~-~~--------~~~~e~~ 634 (1053)
T TIGR01523 569 SSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ET-LN--------RATAESD 634 (1053)
T ss_pred HhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhhc---cc-cc--------hhhhccC
Confidence 42 23456778889999999999999999999987543211 0100 00 01 2457899
Q ss_pred ceEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHH
Q 003824 293 LILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAA 372 (793)
Q Consensus 293 l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 372 (793)
|+|+|+++++||+|++++++|+.|+++||+|||+|||++.||.+||+++||+..+.. ....
T Consensus 635 L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~---~~~~---------------- 695 (1053)
T TIGR01523 635 LEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI---HDRD---------------- 695 (1053)
T ss_pred CEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc---cccc----------------
Confidence 999999999999999999999999999999999999999999999999999864311 0000
Q ss_pred HHHHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc
Q 003824 373 AAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK 452 (793)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~ 452 (793)
......+++|..++.+.++++.+.. . ...||||++|+||.++|+.+|+
T Consensus 696 -------------------------~~~~~~vitG~~l~~l~~~~l~~~~----~--~~~V~ar~sP~~K~~iV~~lq~- 743 (1053)
T TIGR01523 696 -------------------------EIMDSMVMTGSQFDALSDEEVDDLK----A--LCLVIARCAPQTKVKMIEALHR- 743 (1053)
T ss_pred -------------------------ccccceeeehHHhhhcCHHHHHHHh----h--cCeEEEecCHHHHHHHHHHHHh-
Confidence 0011358999999877655544332 2 3469999999999999999998
Q ss_pred CCCeEEEEcCCccChhhhhhcceeEEec--cCCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHH
Q 003824 453 TSSTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNI 528 (793)
Q Consensus 453 ~~~~vlaiGDG~ND~~ml~~AdvGI~i~--g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~ 528 (793)
.|++|+|+|||+||+|||++|||||+|+ |++. |+++||+++.+ |+.+.++ +.|||++|+|+++++.|.+++|+
T Consensus 744 ~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~dd~f~~I~~~-i~~gR~~~~ni~k~i~y~l~~ni 820 (1053)
T TIGR01523 744 RKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLSDDNFASILNA-IEEGRRMFDNIMKFVLHLLAENV 820 (1053)
T ss_pred cCCeeEEeCCCcchHHHHHhCCccEecCCCccHH--HHHhcCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH
Confidence 7999999999999999999999999984 4554 89999999998 7779998 89999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccCcc--cchhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHH
Q 003824 529 AFGFTLFFFEAYASFSGQP--VYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWA 606 (793)
Q Consensus 529 ~~~~~~~~~~~~~~~s~~~--~~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~ 606 (793)
..+++.+++.++..++|.+ +++++|++|+|++++.+|++++++++ ++++.|.+.|+ .+...++++.++..++
T Consensus 821 ~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~--~~~~~m~~~Pr----~~~~~l~~~~~~~~~~ 894 (1053)
T TIGR01523 821 AEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEK--AAPDLMDRLPH----DNEVGIFQKELIIDMF 894 (1053)
T ss_pred HHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCC--CChhHHhcCCC----CCCccccCHHHHHHHH
Confidence 9999999999988777764 58899999999999999999999853 45555555555 5667899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcc---ccccCC-----Cce-eehhhHHHHHHHHHHHHHHHHHHHHhcc-----hh-------
Q 003824 607 LNGVANAAIIFFFCIHAMKQ---QAFRKG-----GEV-IGLEILGTTMYTCVVWVVNCQMALSVTY-----FT------- 665 (793)
Q Consensus 607 ~~~~~~~~~~f~~~~~~~~~---~~~~~~-----g~~-~~~~~~~t~~f~~~v~~~~~~~~l~~~~-----~~------- 665 (793)
+.|++.+++.+..+++.+.. +..... +.. .+.....|++|+++++.+.+..+. .++ |.
T Consensus 895 ~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~-~r~~~~~~~~~~~~~~~ 973 (1053)
T TIGR01523 895 AYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVE-VKDFDNSFFNLHGIPDG 973 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHH-HhcCchhhhhcCccccc
Confidence 99999998887666543221 000000 000 123345677777777766655432 111 11
Q ss_pred ----------hHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003824 666 ----------YIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMR 735 (793)
Q Consensus 666 ----------~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~ 735 (793)
.+.|.++++++++.++++++..|+|+ ++.. +|++.++++ .|+.++.++++.++..++.|+++|+
T Consensus 974 ~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~-~~~~----~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~ 1047 (1053)
T TIGR01523 974 DSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPV-INDD----VFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRR 1047 (1053)
T ss_pred cccccccccCCccCHHHHHHHHHHHHHHHHHHhhhh-hhhh----hhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 24688899999999999999999996 3321 566778886 8998989999999999999998876
Q ss_pred h
Q 003824 736 F 736 (793)
Q Consensus 736 ~ 736 (793)
+
T Consensus 1048 ~ 1048 (1053)
T TIGR01523 1048 L 1048 (1053)
T ss_pred c
Confidence 6
No 8
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-83 Score=699.80 Aligned_cols=567 Identities=23% Similarity=0.328 Sum_probs=455.9
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
+|-+.+++||.++++|++|..+.||||||||||.|+|++.+.++++..|..+... .
T Consensus 415 kMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~-~----------------------- 470 (1034)
T KOG0204|consen 415 KMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPK-S----------------------- 470 (1034)
T ss_pred HHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcc-c-----------------------
Confidence 4556789999999999999999999999999999999999999998877532211 0
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
..-.......++..++...+-....++..+...-+.|||+|.||+.++..+|..+..
T Consensus 471 ------------------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~----- 527 (1034)
T KOG0204|consen 471 ------------------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD----- 527 (1034)
T ss_pred ------------------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh-----
Confidence 001122334455555554444443434444334456899999999999999987755
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhc----------chhhHHHH
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN----------GREFEEQT 233 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~ 233 (793)
++...++++++||+|.||||+++++.+++..++|+|||.|.|+..|... +++.+..+
T Consensus 528 -------------~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~ 594 (1034)
T KOG0204|consen 528 -------------VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSF 594 (1034)
T ss_pred -------------hcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHH
Confidence 2356678899999999999999999988772399999999999999874 34566688
Q ss_pred HHHHHHHHhccceEEEEEEEecCHH--HHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHH
Q 003824 234 KEHINEYADAGLRTLILAYRELDEK--EYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPE 311 (793)
Q Consensus 234 ~~~~~~~~~~G~r~l~~a~k~l~~~--~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~ 311 (793)
++.++.||.+|+||+|+|||+.... +-.+|.. .+..+.+|+++|++||+||.||||++
T Consensus 595 ~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~--------------------~~~~~~~lt~laivGIkDPvRPgV~~ 654 (1034)
T KOG0204|consen 595 KDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN--------------------EELPEGGLTLLAIVGIKDPVRPGVPE 654 (1034)
T ss_pred HHHHHHHHHhhhheeeEEeeccccCCCCCCCccc--------------------cccCCCCeEEEEEeeccCCCCCCcHH
Confidence 9999999999999999999996443 1111211 13457899999999999999999999
Q ss_pred HHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhcc
Q 003824 312 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 391 (793)
Q Consensus 312 ~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (793)
+|+.|+.|||.|.|+||||..||.+||.+|||++++..
T Consensus 655 AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d------------------------------------------ 692 (1034)
T KOG0204|consen 655 AVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD------------------------------------------ 692 (1034)
T ss_pred HHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc------------------------------------------
Confidence 99999999999999999999999999999999987643
Q ss_pred ccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhh
Q 003824 392 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 471 (793)
Q Consensus 392 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~ 471 (793)
.++++|++++...+++..+...++. |.+|.+|.+|..+|+.+++ .|++|+..|||.||+|+|+
T Consensus 693 ----------~~~lEG~eFr~~s~ee~~~i~pkl~------VlARSSP~DK~lLVk~L~~-~g~VVAVTGDGTNDaPALk 755 (1034)
T KOG0204|consen 693 ----------FLALEGKEFRELSQEERDKIWPKLR------VLARSSPNDKHLLVKGLIK-QGEVVAVTGDGTNDAPALK 755 (1034)
T ss_pred ----------cceecchhhhhcCHHHHHhhhhhhe------eeecCCCchHHHHHHHHHh-cCcEEEEecCCCCCchhhh
Confidence 2477888888777666666666553 9999999999999999998 8999999999999999999
Q ss_pred hcceeEEe--ccCCcccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcc
Q 003824 472 EADIGVGI--SGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQP 547 (793)
Q Consensus 472 ~AdvGI~i--~g~~~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~ 547 (793)
+||||.+| +|+|. ||++||++|.|++| +++. +.+||..|.+++|+++|.+.-|++.+.+.|..+... +.+
T Consensus 756 eADVGlAMGIaGTeV--AKEaSDIIi~DDNFssIVk~-v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~---~ds 829 (1034)
T KOG0204|consen 756 EADVGLAMGIAGTEV--AKEASDIIILDDNFSSIVKA-VKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACAT---GDS 829 (1034)
T ss_pred hcccchhccccchhh--hhhhCCeEEEcCchHHHHHH-HHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhc---CCc
Confidence 99999955 78887 99999999999666 8888 899999999999999999999999998888887665 667
Q ss_pred cchhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 003824 548 VYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQ 627 (793)
Q Consensus 548 ~~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 627 (793)
+++..|++|.|+++|.+.+++++.++ |.++.|.++|. +++.+++++.+|..++.+++||-+++|.+.+....
T Consensus 830 PLtAVQlLWVNLIMDTLgALALATep--Pt~~Lm~RkP~----GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~-- 901 (1034)
T KOG0204|consen 830 PLTAVQLLWVNLIMDTLGALALATEP--PTDELMKRKPV----GRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKS-- 901 (1034)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccCC--CChHHhcCCCC----CCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchh--
Confidence 89999999999999999999999864 66777777787 99999999999999999999999999998876432
Q ss_pred cccCCCcee-ehhhHHHHHHHHHHHHHHHHHHHHhcc------hh-hHHHHHHHHHHHHHHHHHHHHhccCccccchhHH
Q 003824 628 AFRKGGEVI-GLEILGTTMYTCVVWVVNCQMALSVTY------FT-YIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYK 699 (793)
Q Consensus 628 ~~~~~g~~~-~~~~~~t~~f~~~v~~~~~~~~l~~~~------~~-~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~ 699 (793)
.+..++... ......|++|.++|+++-+.-+. .+. +. .+.|..+.+.+...+++++++..+.. .
T Consensus 902 if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEin-aRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g---~---- 973 (1034)
T KOG0204|consen 902 IFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEIN-ARKIDERNVFKGIFRNRLFCVIITITVVSQVIIVEFGG---A---- 973 (1034)
T ss_pred hhccCCCCCCchhhheeeehhHHHHHHHHHHHh-hcchhHHhHHHHHhcCceEEEEeeeeeehhhhhhhhcC---c----
Confidence 232333321 23356688888888877666542 222 11 23455555566677777777665542 2
Q ss_pred HHHHHhccChHHHHHHHHHHHHHHHHHHHHHHH
Q 003824 700 VFIEACAPAPSFWLITLLVLMSSLLPYFTYSAI 732 (793)
Q Consensus 700 ~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~ 732 (793)
+|++.++++..|++++++.++.++...+.|.+
T Consensus 974 -~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 974 -FFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred -ceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 56688999999999999999999888888766
No 9
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=1.3e-79 Score=739.63 Aligned_cols=609 Identities=21% Similarity=0.237 Sum_probs=457.8
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
+.++++++|+++++|+||++++||||||||||+|+|+|.+++..+..+.... . ..
T Consensus 270 m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-~------------------------~~ 324 (917)
T TIGR01116 270 MAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLN-E------------------------FC 324 (917)
T ss_pred HHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccc-e------------------------EE
Confidence 4578999999999999999999999999999999999999988764321000 0 00
Q ss_pred cCCCCcC--chhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCc
Q 003824 85 IKGFNFE--DERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQT 162 (793)
Q Consensus 85 ~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~ 162 (793)
..+..+. +..+.+.........+..++++.++++||++.+..++..+.++. .+||+|.||++++++.|+....+...
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~-~gdp~E~ALl~~~~~~g~~~~~~~~~ 403 (917)
T TIGR01116 325 VTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEK-VGEATEAALKVLVEKMGLPATKNGVS 403 (917)
T ss_pred ecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceee-ccChhHHHHHHHHHHcCCCchhcccc
Confidence 0000000 00000000001112345678899999999987754332232222 47999999999999999877655444
Q ss_pred eeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhc----------chhhHHH
Q 003824 163 SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN----------GREFEEQ 232 (793)
Q Consensus 163 ~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~ 232 (793)
.+.....+.. ...+..|++++.+||||+||||||++++ ++++.+|+|||||.|+++|+.. +++.+++
T Consensus 404 ~~~~~~~~~~--~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~ 480 (917)
T TIGR01116 404 SKRRPALGCN--SVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNT 480 (917)
T ss_pred cccccccchh--HHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHH
Confidence 3333221110 0123568899999999999999999997 4678999999999999999742 2345677
Q ss_pred HHHHHHHHHh-ccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHH
Q 003824 233 TKEHINEYAD-AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPE 311 (793)
Q Consensus 233 ~~~~~~~~~~-~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~ 311 (793)
+.+++++|++ +|+|||++|||.+++++... . . .+ ....+.+|+||+|+|+++++||+|+++++
T Consensus 481 i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~-~---------~-~~-----~~~~~~~e~~l~~lGl~~~~Dplr~~v~e 544 (917)
T TIGR01116 481 ILSVIKEMGTTKALRCLALAFKDIPDPREED-L---------L-SD-----PANFEAIESDLTFIGVVGMLDPPRPEVAD 544 (917)
T ss_pred HHHHHHHHHhhcCCeEEEEEEEECCcccccc-c---------c-cc-----chhhhhhcCCcEEEEEeeeeCCCchhHHH
Confidence 8899999999 99999999999997643210 0 0 01 01235689999999999999999999999
Q ss_pred HHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhcc
Q 003824 312 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 391 (793)
Q Consensus 312 ~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (793)
+|+.|+++||++||+|||+.+||.++|+++|+..++....
T Consensus 545 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~---------------------------------------- 584 (917)
T TIGR01116 545 AIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT---------------------------------------- 584 (917)
T ss_pred HHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc----------------------------------------
Confidence 9999999999999999999999999999999976442210
Q ss_pred ccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhh
Q 003824 392 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 471 (793)
Q Consensus 392 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~ 471 (793)
...++|+.+..+.+++... ..++.+||||++|+||.++|+.+|+ .|++|+|+|||+||++||+
T Consensus 585 ----------~~~~~g~~l~~~~~~~~~~------~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~va~iGDG~ND~~alk 647 (917)
T TIGR01116 585 ----------FKSFTGREFDEMGPAKQRA------ACRSAVLFSRVEPSHKSELVELLQE-QGEIVAMTGDGVNDAPALK 647 (917)
T ss_pred ----------ceeeeHHHHhhCCHHHHHH------hhhcCeEEEecCHHHHHHHHHHHHh-cCCeEEEecCCcchHHHHH
Confidence 1245666655443322221 2345679999999999999999997 8999999999999999999
Q ss_pred hcceeEEec-cCCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCccc
Q 003824 472 EADIGVGIS-GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPV 548 (793)
Q Consensus 472 ~AdvGI~i~-g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~ 548 (793)
+|||||+|+ |++. |+++||+++.+ |+.+.++ +.|||++|.|+++++.|.+++|+..+++++++.++. ...+
T Consensus 648 ~AdVGia~g~g~~~--ak~aAD~vl~dd~f~~i~~~-i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~p 721 (917)
T TIGR01116 648 KADIGIAMGSGTEV--AKEASDMVLADDNFATIVAA-VEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALG---IPEG 721 (917)
T ss_pred hCCeeEECCCCcHH--HHHhcCeEEccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHc---CCch
Confidence 999999994 4444 88999999999 7889999 799999999999999999999999999999988763 2257
Q ss_pred chhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 003824 549 YNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQA 628 (793)
Q Consensus 549 ~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 628 (793)
|+++|++|+|++++.+|++++++++ ++++.+.++|+ .++++++++++++.|++.|+++++++++.+++.+...+
T Consensus 722 l~~~qll~inli~d~lp~~~l~~~~--~~~~~m~~pP~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 795 (917)
T TIGR01116 722 LIPVQLLWVNLVTDGLPATALGFNP--PDKDIMWKPPR----RPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTH 795 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC--cchhHhcCCCC----CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999865 34555555565 56789999999999999999999987766554332101
Q ss_pred c-cC-----------CCce----eehhhHHHHHHHHHHHHHHHHHHHHhcc-----h--hhHHHHHHHHHHHHHHHHHHH
Q 003824 629 F-RK-----------GGEV----IGLEILGTTMYTCVVWVVNCQMALSVTY-----F--TYIQHLFIWGGITFWYIFLLA 685 (793)
Q Consensus 629 ~-~~-----------~g~~----~~~~~~~t~~f~~~v~~~~~~~~l~~~~-----~--~~~~~~~i~~si~~~~i~~~i 685 (793)
+ .. ++.. .+.....|++|+++++.+.++.+. .++ | ..+.|.++|+++++.++++++
T Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~-~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~ 874 (917)
T TIGR01116 796 FTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALN-ALSEDQSLLRMPPWVNKWLIGAICLSMALHFL 874 (917)
T ss_pred cccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHH-HcCCcccccccCCccCHHHHHHHHHHHHHHHH
Confidence 1 00 1100 012345688888888877777542 222 2 124678899999999999998
Q ss_pred HhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003824 686 YGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQM 734 (793)
Q Consensus 686 ~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~ 734 (793)
..++|+ ++. +|+..++++..|+++++++++.++.+++.|+++|
T Consensus 875 ~~~v~~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 875 ILYVPF-LSR-----IFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHhHH-HHH-----HhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 888885 454 7888999999999999999999999999998763
No 10
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=8.7e-79 Score=737.08 Aligned_cols=609 Identities=19% Similarity=0.201 Sum_probs=459.6
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
+.+++++||+++++|+||++++||+|||||||+|+|+|.++++++..|..+..+. .
T Consensus 325 m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~-----------~------------- 380 (997)
T TIGR01106 325 MARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTED-----------Q------------- 380 (997)
T ss_pred HHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccC-----------C-------------
Confidence 4578999999999999999999999999999999999999999887765321100 0
Q ss_pred cCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCC--CceeeecCCccHHHHHHHHHHcCCEEEeecCc
Q 003824 85 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEEN--GKISYEAESPDEAAFVIAARELGFEFYERTQT 162 (793)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~--~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~ 162 (793)
.+.. ........+.++.++++||++.+..+... -.-.+..+||+|.||++++...+.....
T Consensus 381 -~~~~------------~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~---- 443 (997)
T TIGR01106 381 -SGVS------------FDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVME---- 443 (997)
T ss_pred -CCcc------------CCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHH----
Confidence 0000 00122345678899999999876533211 0012446899999999999865432110
Q ss_pred eeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcC---CCcEEEEEecCchHhHHHHhhc---------chhhH
Q 003824 163 SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE---EGTLLLLSKGADSVMFERLAEN---------GREFE 230 (793)
Q Consensus 163 ~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~ 230 (793)
.+..|++++.+||||+||||+++++.. ++++++|+|||||.|+++|+.. +++.+
T Consensus 444 --------------~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~ 509 (997)
T TIGR01106 444 --------------MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELK 509 (997)
T ss_pred --------------HHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHH
Confidence 125688899999999999999998743 2468999999999999999742 23456
Q ss_pred HHHHHHHHHHHhccceEEEEEEEecCHHHHHH-HHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCCh
Q 003824 231 EQTKEHINEYADAGLRTLILAYRELDEKEYKQ-FNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGV 309 (793)
Q Consensus 231 ~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~-~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v 309 (793)
+.+.+.+++++++|+|||++|||.++++++.+ |.. +++ ..+..|+||+|+|+++++||+|+++
T Consensus 510 ~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~-----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v 573 (997)
T TIGR01106 510 EAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQF-----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAV 573 (997)
T ss_pred HHHHHHHHHHHhcCCEEEEEEEeecCcccccccccc-----------cch-----hhhccccCcEEEEEEeccCCChHHH
Confidence 77888999999999999999999998765432 110 111 1134589999999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhh
Q 003824 310 PECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKE 389 (793)
Q Consensus 310 ~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (793)
+++|+.|+++||++||+|||+..||.++|+++|++.++... . .++ ..++....+
T Consensus 574 ~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~-------~--~~i-----------------~~~~~~~~~ 627 (997)
T TIGR01106 574 PDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNET-------V--EDI-----------------AARLNIPVS 627 (997)
T ss_pred HHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccc-------h--hhh-----------------hhhcccccc
Confidence 99999999999999999999999999999999998764321 0 000 000000000
Q ss_pred ccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhh
Q 003824 390 LLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGM 469 (793)
Q Consensus 390 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~m 469 (793)
.. ++.....++++|+.++.+.++++ .++...++.+||||++|+||.+||+.+|+ .|++|+|+|||+||+||
T Consensus 628 ~~----~~~~~~~~vi~G~~l~~l~~~el----~~~~~~~~~~VfaR~sPeqK~~IV~~lq~-~g~vv~~~GDG~ND~pa 698 (997)
T TIGR01106 628 QV----NPRDAKACVVHGSDLKDMTSEQL----DEILKYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPA 698 (997)
T ss_pred cc----ccccccceEEEhHHhhhCCHHHH----HHHHHhcCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHH
Confidence 00 01112347999999987766544 44445566689999999999999999998 89999999999999999
Q ss_pred hhhcceeEEec--cCCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccC
Q 003824 470 LQEADIGVGIS--GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSG 545 (793)
Q Consensus 470 l~~AdvGI~i~--g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~ 545 (793)
|++|||||+|+ |+++ |+++||+++.+ |..+.++ +.|||.+|.|+++++.|.+++|+..+++.+++.++..
T Consensus 699 Lk~AdVGiamg~~G~~v--ak~aADivL~dd~f~~Iv~a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~--- 772 (997)
T TIGR01106 699 LKKADIGVAMGIAGSDV--SKQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANI--- 772 (997)
T ss_pred HhhCCcceecCCcccHH--HHHhhceEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC---
Confidence 99999999884 5666 89999999999 6669998 9999999999999999999999999999999988753
Q ss_pred cccchhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHH-HHHHHHHHHHHHHHHHHh
Q 003824 546 QPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWA-LNGVANAAIIFFFCIHAM 624 (793)
Q Consensus 546 ~~~~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~-~~~~~~~~~~f~~~~~~~ 624 (793)
..+++++|++|+|++++++|+++++.++ ++++.|.++|+ ..+...++++.++..|+ ..|++++++.|+.+++.+
T Consensus 773 ~~pl~~~qlL~inli~d~lp~~al~~e~--~~~~~m~~~P~---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 847 (997)
T TIGR01106 773 PLPLGTITILCIDLGTDMVPAISLAYEK--AESDIMKRQPR---NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVIL 847 (997)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhcCC--CCcccccCCCc---CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3468899999999999999999999854 56666667776 22467889998887765 569999988887776544
Q ss_pred ccccc------cC---------CCc--ee-----------ehhhHHHHHHHHHHHHHHHHHHH-Hhcchh----hHHHHH
Q 003824 625 KQQAF------RK---------GGE--VI-----------GLEILGTTMYTCVVWVVNCQMAL-SVTYFT----YIQHLF 671 (793)
Q Consensus 625 ~~~~~------~~---------~g~--~~-----------~~~~~~t~~f~~~v~~~~~~~~l-~~~~~~----~~~~~~ 671 (793)
...++ .. ++. .. ....+.|++|+++++++.+..+. ++...+ .+.|..
T Consensus 848 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~ 927 (997)
T TIGR01106 848 AENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKI 927 (997)
T ss_pred hhcCCccccccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHH
Confidence 21110 00 000 00 00146788888888887777652 222212 146778
Q ss_pred HHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003824 672 IWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRF 736 (793)
Q Consensus 672 i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~ 736 (793)
+++++++.++++++..++|+ ++. +|+..++++..|+.++.++++.++..++.|+++|++
T Consensus 928 l~~~~~~~~~l~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 928 LIFGLFEETALAAFLSYCPG-MGV-----ALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHHHHhhh-hHH-----HhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88888888888888888885 455 788889999999999999999999999999888764
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=9.4e-77 Score=717.73 Aligned_cols=560 Identities=23% Similarity=0.297 Sum_probs=435.2
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.++++++|+++++|+||++++||||||||||+|+|++.+++..+..+..+..
T Consensus 356 ~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~-------------------------- 409 (941)
T TIGR01517 356 KMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDV-------------------------- 409 (941)
T ss_pred HHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcc--------------------------
Confidence 456789999999999999999999999999999999999999876654432100
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
.. ..++...+++...+.||+..+...++.+. .+..+||+|.||++++++.|.....
T Consensus 410 ------------~~------~~~~~~~~~l~~~~~~~s~~~~~~~~~~~-~~~~g~p~e~All~~~~~~~~~~~~----- 465 (941)
T TIGR01517 410 ------------LR------NVPKHVRNILVEGISLNSSSEEVVDRGGK-RAFIGSKTECALLGFLLLLGRDYQE----- 465 (941)
T ss_pred ------------cc------cCCHHHHHHHHHHHHhCCCCccccCCCCc-cccCCCccHHHHHHHHHHcCCCHHH-----
Confidence 00 00122445555556666554432211121 2456899999999999987743211
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhc----ch-----hhHHHHH
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN----GR-----EFEEQTK 234 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----~~-----~~~~~~~ 234 (793)
.+..|++++.+||+|+||||+++++.+++++++|+|||||.|+++|+.. +. +.++++.
T Consensus 466 -------------~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~ 532 (941)
T TIGR01517 466 -------------VRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCA 532 (941)
T ss_pred -------------HHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHH
Confidence 1135678889999999999999999877889999999999999999752 10 1356788
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHH
Q 003824 235 EHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECID 314 (793)
Q Consensus 235 ~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~ 314 (793)
+.+++++.+|+||+++|||+++.+++..| +..|+||+|+|+++++||+|++++++|+
T Consensus 533 ~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~-----------------------~~~e~~l~~lGli~~~Dplr~~~~~aI~ 589 (941)
T TIGR01517 533 DVIEPLASDALRTICLAYRDFAPEEFPRK-----------------------DYPNGGLTLIGVVGIKDPLRPGVREAVQ 589 (941)
T ss_pred HHHHHHHhcCCEEEEEEEEecCccccccc-----------------------cccccCcEEEEEeeccCCCchhHHHHHH
Confidence 89999999999999999999876543211 2347899999999999999999999999
Q ss_pred HHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccc
Q 003824 315 KLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSS 394 (793)
Q Consensus 315 ~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (793)
.|+++||++||+|||++.||.+||++|||.+++.
T Consensus 590 ~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~---------------------------------------------- 623 (941)
T TIGR01517 590 ECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG---------------------------------------------- 623 (941)
T ss_pred HHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc----------------------------------------------
Confidence 9999999999999999999999999999976431
Q ss_pred cCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcc
Q 003824 395 NESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 474 (793)
Q Consensus 395 ~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~Ad 474 (793)
.+++|+.+..+.++++.+... +..||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++||
T Consensus 624 --------~vi~G~~~~~l~~~el~~~i~------~~~Vfar~sPe~K~~iV~~lq~-~g~vVam~GDGvNDapALk~Ad 688 (941)
T TIGR01517 624 --------LAMEGKEFRRLVYEEMDPILP------KLRVLARSSPLDKQLLVLMLKD-MGEVVAVTGDGTNDAPALKLAD 688 (941)
T ss_pred --------eEeeHHHhhhCCHHHHHHHhc------cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCCchHHHHHhCC
Confidence 267777776655544444332 4469999999999999999998 8999999999999999999999
Q ss_pred eeEEec--cCCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccch
Q 003824 475 IGVGIS--GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYN 550 (793)
Q Consensus 475 vGI~i~--g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~ 550 (793)
|||+|+ |++. |+++||+++.+ |+.+.++ +.|||++|.|+++++.|.+++|+..+++.+++.++.+ ..+++
T Consensus 689 VGIAmg~~gtdv--Ak~aADivL~dd~f~~I~~~-i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~---~~pl~ 762 (941)
T TIGR01517 689 VGFSMGISGTEV--AKEASDIILLDDNFASIVRA-VKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISS---TSPLT 762 (941)
T ss_pred cceecCCCccHH--HHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccHH
Confidence 999984 5555 99999999995 6669999 7999999999999999999999999999988877753 45799
Q ss_pred hHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 003824 551 DWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFR 630 (793)
Q Consensus 551 ~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 630 (793)
++|++|+|++++++|+++++.+ ++++.++++|+ +.+..+++++.++..++.+|+++++++|+++++... .+.
T Consensus 763 ~~qil~inl~~d~~~al~l~~e---~~~~~lm~~~P---~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~ 834 (941)
T TIGR01517 763 AVQLLWVNLIMDTLAALALATE---PPTEALLDRKP---IGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFD 834 (941)
T ss_pred HHHHHHHHHHHHHhhHHHHccC---CccHHHHhCCC---CCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhc
Confidence 9999999999999999999864 45555665555 256678899999999999999999998877665321 110
Q ss_pred CCC----ceeehhhHHHHHHHHHHHHHHHHHHHH-hc----ch-hhHHHHHHHHHHHHHHHHHHHHhccCccccchhHHH
Q 003824 631 KGG----EVIGLEILGTTMYTCVVWVVNCQMALS-VT----YF-TYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKV 700 (793)
Q Consensus 631 ~~g----~~~~~~~~~t~~f~~~v~~~~~~~~l~-~~----~~-~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~ 700 (793)
..+ .........|++|.++++.+.++.+.. +. .| .++.|.++|+++++.+++++++..+ ++.
T Consensus 835 ~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~---~~~----- 906 (941)
T TIGR01517 835 VSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEF---GGS----- 906 (941)
T ss_pred ccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHH---HHH-----
Confidence 111 000123456888888888777776532 11 12 2356778888888888877665532 233
Q ss_pred HHHHhccChHHHHHHHHHHHHHHHHHHHHHHH
Q 003824 701 FIEACAPAPSFWLITLLVLMSSLLPYFTYSAI 732 (793)
Q Consensus 701 ~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~ 732 (793)
+|+..++++..|+.+++++++.++..++.|++
T Consensus 907 ~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 907 FFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77788999999999999999888888888775
No 12
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=7.5e-73 Score=679.75 Aligned_cols=559 Identities=20% Similarity=0.242 Sum_probs=435.0
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCC-CccHHHHHHHhhcCCCCccchhhhhhcc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGR-GVTEVERAMARRKGSPLEEEVTEEQEDK 82 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (793)
++.++++++|+++++|+||++++||||||||||+|+|++.+++..+..+.. .... .+
T Consensus 304 r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~------------~~---------- 361 (884)
T TIGR01522 304 RMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVS------------LN---------- 361 (884)
T ss_pred HHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCc------------cC----------
Confidence 456789999999999999999999999999999999999999876543210 0000 00
Q ss_pred cccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCc
Q 003824 83 ASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQT 162 (793)
Q Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~ 162 (793)
..+....+++ ......++.+.+++.+.++||++..+..+ +. ..+||+|.||++++++.|+...
T Consensus 362 -~~~~~~~~~~------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~--~~---~~g~p~e~All~~~~~~~~~~~----- 424 (884)
T TIGR01522 362 -QFGEVIVDGD------VLHGFYTVAVSRILEAGNLCNNAKFRNEA--DT---LLGNPTDVALIELLMKFGLDDL----- 424 (884)
T ss_pred -CCCccccccc------ccccccCHHHHHHHHHHhhhCCCeecCCC--CC---cCCChHHHHHHHHHHHcCcHhH-----
Confidence 0000000000 00111234567888999999998654322 11 1369999999999998875311
Q ss_pred eeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcC-CCcEEEEEecCchHhHHHHhhc----------chhhHH
Q 003824 163 SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE-EGTLLLLSKGADSVMFERLAEN----------GREFEE 231 (793)
Q Consensus 163 ~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~ 231 (793)
+..|+.++.+||+|+||||+++++.+ ++++++|+|||||.|+++|... +++.++
T Consensus 425 ---------------~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~ 489 (884)
T TIGR01522 425 ---------------RETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRD 489 (884)
T ss_pred ---------------HhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHH
Confidence 14577889999999999999999874 5678999999999999999752 123456
Q ss_pred HHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHH
Q 003824 232 QTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPE 311 (793)
Q Consensus 232 ~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~ 311 (793)
.+.+.+++++.+|+||+++|||.+ +.+|+|+|+++++||+|+++++
T Consensus 490 ~i~~~~~~~a~~G~rvl~~A~~~~----------------------------------~~~l~~lGli~l~Dp~r~~~~~ 535 (884)
T TIGR01522 490 VIQEEAAEMASAGLRVIAFASGPE----------------------------------KGQLTFLGLVGINDPPRPGVKE 535 (884)
T ss_pred HHHHHHHHHHhcCCEEEEEEEEcC----------------------------------CCCeEEEEEEeccCcchhHHHH
Confidence 778888999999999999999865 2589999999999999999999
Q ss_pred HHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhcc
Q 003824 312 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 391 (793)
Q Consensus 312 ~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (793)
+|+.|+++||+++|+|||+.+||.++|+++||......
T Consensus 536 ~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~------------------------------------------ 573 (884)
T TIGR01522 536 AVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ------------------------------------------ 573 (884)
T ss_pred HHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc------------------------------------------
Confidence 99999999999999999999999999999999754321
Q ss_pred ccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhh
Q 003824 392 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 471 (793)
Q Consensus 392 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~ 471 (793)
+++|+.++...++++.+.+. +..||||++|+||..+|+.+|+ .|++|+|+|||.||+|||+
T Consensus 574 ------------~v~g~~l~~~~~~~l~~~~~------~~~Vfar~~P~~K~~iv~~lq~-~g~~v~mvGDGvND~pAl~ 634 (884)
T TIGR01522 574 ------------SVSGEKLDAMDDQQLSQIVP------KVAVFARASPEHKMKIVKALQK-RGDVVAMTGDGVNDAPALK 634 (884)
T ss_pred ------------eeEhHHhHhCCHHHHHHHhh------cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHH
Confidence 45666665544444433322 4559999999999999999998 8999999999999999999
Q ss_pred hcceeEEeccCCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccc
Q 003824 472 EADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVY 549 (793)
Q Consensus 472 ~AdvGI~i~g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~ 549 (793)
+|||||+|+......|+++||+++.+ |..+.++ +.+||.+|.|+++++.|.++.|+..+++.+++.++. ...++
T Consensus 635 ~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~-i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl 710 (884)
T TIGR01522 635 LADIGVAMGQTGTDVAKEAADMILTDDDFATILSA-IEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMG---FPNPL 710 (884)
T ss_pred hCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHc---CCCch
Confidence 99999999422222277999999977 6668888 899999999999999999999999888877666653 34579
Q ss_pred hhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 003824 550 NDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAF 629 (793)
Q Consensus 550 ~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 629 (793)
+++|++|+|++++.+|+++++.++ ++++.+.++|+ +++++++++.++..++++|++++++.++++++.+..
T Consensus 711 ~~~qiL~inl~~d~~~a~~l~~e~--~~~~~m~~~P~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--- 781 (884)
T TIGR01522 711 NAMQILWINILMDGPPAQSLGVEP--VDKDVMRKPPR----PRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD--- 781 (884)
T ss_pred hHHHHHHHHHHHHhhHHHHhccCC--CChhHhhCCCC----CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC---
Confidence 999999999999999999999743 45555555565 677899999999999999999998877665543321
Q ss_pred cCCCceeehhhHHHHHHHHHHHHHHHHHHHHhcc-----h--hhHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHH
Q 003824 630 RKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTY-----F--TYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFI 702 (793)
Q Consensus 630 ~~~g~~~~~~~~~t~~f~~~v~~~~~~~~l~~~~-----~--~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~ 702 (793)
+.. .....|++|+++++.+.++.+. .++ | .++.|.++|+++++.++++++..++|+ ++. +|
T Consensus 782 ---~~~--~~~~~t~~f~~~v~~q~~~~~~-~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~-~~~-----~f 849 (884)
T TIGR01522 782 ---GVI--TARDTTMTFTCFVFFDMFNALA-CRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPP-LQS-----VF 849 (884)
T ss_pred ---Ccc--hhhHHHHHHHHHHHHHHHHHHH-HccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHH-HHH-----HH
Confidence 111 1134577777777777666542 222 2 235688999999999999998888885 444 78
Q ss_pred HHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003824 703 EACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRF 736 (793)
Q Consensus 703 ~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~ 736 (793)
+..++++..|+.+++++++.++..++.|+++|.+
T Consensus 850 ~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 850 QTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 8889999999999999999999999999988654
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1.1e-70 Score=670.72 Aligned_cols=573 Identities=20% Similarity=0.229 Sum_probs=401.2
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.+++++||+++.+|.||+|+++|||||||||+|+|+|.+++..+...... . .
T Consensus 428 rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~-~------------~------------- 481 (1054)
T TIGR01657 428 RLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFL-K------------I------------- 481 (1054)
T ss_pred HHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccc-c------------c-------------
Confidence 3467899999999999999999999999999999999999987643210000 0 0
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEe-ecCc
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYE-RTQT 162 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~-r~~~ 162 (793)
. ..........+..++++||++.... + + ..|||+|.|+++++ |+.+.. ....
T Consensus 482 -----------~------~~~~~~~~~~~~~~~a~C~~~~~~~----~--~-~~Gdp~E~al~~~~---~~~~~~~~~~~ 534 (1054)
T TIGR01657 482 -----------V------TEDSSLKPSITHKALATCHSLTKLE----G--K-LVGDPLDKKMFEAT---GWTLEEDDESA 534 (1054)
T ss_pred -----------c------ccccccCchHHHHHHHhCCeeEEEC----C--E-EecCHHHHHHHHhC---CCEEECCCCcc
Confidence 0 0000012235677899999986542 2 1 35799999999975 555433 1110
Q ss_pred ---e--eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCC-CcEEEEEecCchHhHHHHhhcchhhHHHHHHH
Q 003824 163 ---S--ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE-GTLLLLSKGADSVMFERLAENGREFEEQTKEH 236 (793)
Q Consensus 163 ---~--~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~ 236 (793)
. ..+...+ ....+++++.+||+|+||||||+++.++ +++++|+|||||.|+++|.+. ..++++.+.
T Consensus 535 ~~~~~~~~i~~~~------~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~--~~p~~~~~~ 606 (1054)
T TIGR01657 535 EPTSILAVVRTDD------PPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE--TVPSDYQEV 606 (1054)
T ss_pred cccccccceeccC------CCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc--CCChhHHHH
Confidence 0 0011000 1257999999999999999999999864 568899999999999999864 356788899
Q ss_pred HHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHH
Q 003824 237 INEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKL 316 (793)
Q Consensus 237 ~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L 316 (793)
+++|+.+|+|||++|||++++.+.+++.+ .+| +.+|+||+|+|+++++||+|++++++|+.|
T Consensus 607 ~~~~a~~G~RVLalA~k~l~~~~~~~~~~----------~~r--------~~~E~~L~flGli~~~d~lr~~~~~~I~~l 668 (1054)
T TIGR01657 607 LKSYTREGYRVLALAYKELPKLTLQKAQD----------LSR--------DAVESNLTFLGFIVFENPLKPDTKEVIKEL 668 (1054)
T ss_pred HHHHHhcCCEEEEEEEeecCccchhhhhh----------ccH--------HHHhcCceEEEEEEEecCCCccHHHHHHHH
Confidence 99999999999999999997533222110 122 568999999999999999999999999999
Q ss_pred HHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcc---cccc--hhhhHHHHHHHHHHHHHHHHhhhhhcc
Q 003824 317 AQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPES---KTLE--KSEDKSAAAAALKASVLHQLIRGKELL 391 (793)
Q Consensus 317 ~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (793)
++|||++||+|||++.||.+||++|||++++..++..+....+. ..+. ..+........ ..........
T Consensus 669 ~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-- 742 (1054)
T TIGR01657 669 KRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQ----VEIPYPLGQD-- 742 (1054)
T ss_pred HHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCcccccccc----ccccCccccc--
Confidence 99999999999999999999999999998765555443221100 0000 00000000000 0000000000
Q ss_pred ccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhh
Q 003824 392 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 471 (793)
Q Consensus 392 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~ 471 (793)
.........+.++++|+.++.+.+. ..+.+.++...++ ||||++|+||.++|+.+|+ .|++|+|+|||+||+||||
T Consensus 743 ~~~~~~~~~~~~~itG~~l~~l~~~-~~~~l~~~~~~~~--VfAR~sP~qK~~iV~~lq~-~g~~V~m~GDG~ND~~ALK 818 (1054)
T TIGR01657 743 SVEDLLASRYHLAMSGKAFAVLQAH-SPELLLRLLSHTT--VFARMAPDQKETLVELLQK-LDYTVGMCGDGANDCGALK 818 (1054)
T ss_pred chhhhcccceEEEEEcHHHHHHHHh-hHHHHHHHHhcCe--EEEecCHHHHHHHHHHHHh-CCCeEEEEeCChHHHHHHH
Confidence 0000112356789999999876432 2234555555554 9999999999999999998 8999999999999999999
Q ss_pred hcceeEEeccCCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccc
Q 003824 472 EADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVY 549 (793)
Q Consensus 472 ~AdvGI~i~g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~ 549 (793)
+|||||+|++++ |+.+|||++.+ |+.+.++ +.+||.++.++.+++.|.+..++...+..++..+ .+ .++
T Consensus 819 ~AdVGIam~~~d---as~AA~f~l~~~~~~~I~~~-I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----~~-~~l 889 (1054)
T TIGR01657 819 QADVGISLSEAE---ASVAAPFTSKLASISCVPNV-IREGRCALVTSFQMFKYMALYSLIQFYSVSILYL----IG-SNL 889 (1054)
T ss_pred hcCcceeecccc---ceeecccccCCCcHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cc-CcC
Confidence 999999997765 56899999886 6668888 8999999999999999998888776554443222 23 458
Q ss_pred hhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 003824 550 NDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAF 629 (793)
Q Consensus 550 ~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 629 (793)
.++|++|+|++++.+|+++++..+ +.+.++++|+ ...++++.++..++.+++++.++.++.+++....+++
T Consensus 890 ~~~Q~l~i~li~~~~~~l~l~~~~---p~~~l~~~~P------~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~ 960 (1054)
T TIGR01657 890 GDGQFLTIDLLLIFPVALLMSRNK---PLKKLSKERP------PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWY 960 (1054)
T ss_pred ccHHHHHHHHHHHHHHHHHHHcCC---chhhcCCCCC------CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 899999999999999999998753 4445555543 3689999999999999999999998888776543332
Q ss_pred cCCCc-----eeehhhHHHHHHHHHHHHHHHHHHHHhc-----chhhHHHHHHHHHHHHHHHHHH
Q 003824 630 RKGGE-----VIGLEILGTTMYTCVVWVVNCQMALSVT-----YFTYIQHLFIWGGITFWYIFLL 684 (793)
Q Consensus 630 ~~~g~-----~~~~~~~~t~~f~~~v~~~~~~~~l~~~-----~~~~~~~~~i~~si~~~~i~~~ 684 (793)
..... ........|++|... ..+.+..+...+ ..+++.|..++.++++.+++++
T Consensus 961 ~~~~~~~~~~~~~~~~~~T~~f~~~-~~~~~~~~~~~~~g~pf~~~~~~N~~~~~~~~~~~~~~~ 1024 (1054)
T TIGR01657 961 KPENPVDLEKENFPNLLNTVLFFVS-SFQYLITAIVNSKGPPFREPIYKNKPFVYLLITGLGLLL 1024 (1054)
T ss_pred cCCCCCCcccccCccHHHHHHHHHH-HHHHHHheEEEcCCcchhhhHHHhHHHHHHHHHHHHHHH
Confidence 11110 011123356666333 333333332111 1235678777777776655554
No 14
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=1.5e-70 Score=656.04 Aligned_cols=534 Identities=18% Similarity=0.176 Sum_probs=400.9
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.++++++|+++++|+||++++||||||||||+|+|++.+++..+..
T Consensus 349 ~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~-------------------------------- 396 (903)
T PRK15122 349 AMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR-------------------------------- 396 (903)
T ss_pred HHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC--------------------------------
Confidence 356889999999999999999999999999999999999887521100
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
.. ++++...++|... + . ..+||.|.||++++.+.|....
T Consensus 397 ---------------------~~---~~~l~~a~l~s~~--~--~-------~~~~p~e~All~~a~~~~~~~~------ 435 (903)
T PRK15122 397 ---------------------KD---ERVLQLAWLNSFH--Q--S-------GMKNLMDQAVVAFAEGNPEIVK------ 435 (903)
T ss_pred ---------------------Ch---HHHHHHHHHhCCC--C--C-------CCCChHHHHHHHHHHHcCchhh------
Confidence 00 1233334443211 0 0 1469999999999988664210
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhc---------chhhHHHHH
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTK 234 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~ 234 (793)
...|+.+..+||+|.||||++++++++|++++++||||+.|+++|... +++.++++.
T Consensus 436 --------------~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 501 (903)
T PRK15122 436 --------------PAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLL 501 (903)
T ss_pred --------------hhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHH
Confidence 135677888999999999999999878889999999999999999752 223456677
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHH
Q 003824 235 EHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECID 314 (793)
Q Consensus 235 ~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~ 314 (793)
+.+++++.+|+||+++|||+++.++..++ ..+..|+|++|+|+++++||+|++++++|+
T Consensus 502 ~~~~~~a~~G~rvlavA~k~~~~~~~~~~---------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~ 560 (903)
T PRK15122 502 ALAEAYNADGFRVLLVATREIPGGESRAQ---------------------YSTADERDLVIRGFLTFLDPPKESAAPAIA 560 (903)
T ss_pred HHHHHHHhCCCEEEEEEEeccCccccccc---------------------cccccccCcEEEEEEeccCccHHHHHHHHH
Confidence 88899999999999999999865432100 012347899999999999999999999999
Q ss_pred HHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccc
Q 003824 315 KLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSS 394 (793)
Q Consensus 315 ~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (793)
.|+++||+++|+|||+..||.+||+++||..+.
T Consensus 561 ~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~~----------------------------------------------- 593 (903)
T PRK15122 561 ALRENGVAVKVLTGDNPIVTAKICREVGLEPGE----------------------------------------------- 593 (903)
T ss_pred HHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----------------------------------------------
Confidence 999999999999999999999999999994210
Q ss_pred cCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcc
Q 003824 395 NESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 474 (793)
Q Consensus 395 ~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~Ad 474 (793)
+++|..++.+.++++.+... .+ .||+|++|+||.++|+.+|+ .|++|+|+|||.||+|||++||
T Consensus 594 ---------vi~G~el~~~~~~el~~~v~----~~--~VfAr~sPe~K~~iV~~Lq~-~G~vVamtGDGvNDaPALk~AD 657 (903)
T PRK15122 594 ---------PLLGTEIEAMDDAALAREVE----ER--TVFAKLTPLQKSRVLKALQA-NGHTVGFLGDGINDAPALRDAD 657 (903)
T ss_pred ---------ccchHhhhhCCHHHHHHHhh----hC--CEEEEeCHHHHHHHHHHHHh-CCCEEEEECCCchhHHHHHhCC
Confidence 56677776555444444333 33 39999999999999999998 8999999999999999999999
Q ss_pred eeEEec-cCCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchh
Q 003824 475 IGVGIS-GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYND 551 (793)
Q Consensus 475 vGI~i~-g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~ 551 (793)
|||+|+ |++. |+++||+++.+ |..+..+ +.+||..|.|+++++.|.+..|+..+++.++..++. +..++.+
T Consensus 658 VGIAmg~gtdv--AkeaADiVLldd~f~~Iv~a-i~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~ 731 (903)
T PRK15122 658 VGISVDSGADI--AKESADIILLEKSLMVLEEG-VIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFI---PFLPMLA 731 (903)
T ss_pred EEEEeCcccHH--HHHhcCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---ccchhHH
Confidence 999995 3444 89999999998 4458888 899999999999999999999998888777665553 2356899
Q ss_pred HHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccC
Q 003824 552 WFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRK 631 (793)
Q Consensus 552 ~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 631 (793)
.|++|.|++++. |.++++.++ ++++.| +.|+ .++.+++++.+++ ..+.+.+.+++.|++.++.+..
T Consensus 732 ~qil~~nli~D~-~~lal~~d~--~~~~~m-~~P~----~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~----- 797 (903)
T PRK15122 732 IHLLLQNLMYDI-SQLSLPWDK--MDKEFL-RKPR----KWDAKNIGRFMLW-IGPTSSIFDITTFALMWFVFAA----- 797 (903)
T ss_pred HHHHHHHHHHHH-HHHhhcCCC--CCHhhc-CCCC----CCChhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhcc-----
Confidence 999999999995 999998754 444555 7776 5667788775543 3333334444444443332221
Q ss_pred CCceeehhhHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHHHHHHHHHHhccCc-cccchhHHHHHHHhccC
Q 003824 632 GGEVIGLEILGTTMYTCVVWVVNCQMALSVTY--FTYIQHLFIWGGITFWYIFLLAYGAMDP-YISTTAYKVFIEACAPA 708 (793)
Q Consensus 632 ~g~~~~~~~~~t~~f~~~v~~~~~~~~l~~~~--~~~~~~~~i~~si~~~~i~~~i~~~i~~-~~~~~~~~~~~~~~~~s 708 (793)
|.......+.+..|+.+++.+.+.++ ..++ ..++.+...+..+++.++++++..++|+ .++. +|+..+++
T Consensus 798 -~~~~~~~~~~t~~f~~l~~~q~~~~~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~f~~~~l~ 870 (903)
T PRK15122 798 -NSVEMQALFQSGWFIEGLLSQTLVVH-MLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLGA-----MVGLEPLP 870 (903)
T ss_pred -CcHhhhhhhHHHHHHHHHHHHHHHHH-hhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHHHH-----HhCCCCCC
Confidence 10000012456678888888777764 3333 2344566667777777777777777774 1233 77788999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 003824 709 PSFWLITLLVLMSSLLPYFTYS-AIQMR 735 (793)
Q Consensus 709 ~~~wl~~l~~~~~~ll~~~i~k-~~~~~ 735 (793)
+.+|++++.++++.++..++.| ++.|+
T Consensus 871 ~~~~~~~~~~~~~~~~~~e~~k~~~~r~ 898 (903)
T PRK15122 871 WSYFPWLAATLLGYCLVAQGMKRFYIRR 898 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999888888887777 44443
No 15
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=5.7e-68 Score=632.72 Aligned_cols=533 Identities=17% Similarity=0.219 Sum_probs=385.6
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.+++++||+++++|+||++|+||||||||||+|+|++.++... .+.
T Consensus 351 ~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~---~~~----------------------------- 398 (902)
T PRK10517 351 KLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI---SGK----------------------------- 398 (902)
T ss_pred HHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecC---CCC-----------------------------
Confidence 356889999999999999999999999999999999999875310 000
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
. .++++...++|.... . ..+||.|.|+++++...+..
T Consensus 399 ---------------------~---~~~ll~~a~l~~~~~----~-------~~~~p~d~All~~a~~~~~~-------- 435 (902)
T PRK10517 399 ---------------------T---SERVLHSAWLNSHYQ----T-------GLKNLLDTAVLEGVDEESAR-------- 435 (902)
T ss_pred ---------------------C---HHHHHHHHHhcCCcC----C-------CCCCHHHHHHHHHHHhcchh--------
Confidence 0 123445555543321 0 13699999999998653210
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhc---------chhhHHHHH
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTK 234 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~ 234 (793)
.....|+.+..+||||+||||+++++++++.+.+++|||++.|+++|+.. +++.++.+.
T Consensus 436 ------------~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 503 (902)
T PRK10517 436 ------------SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIK 503 (902)
T ss_pred ------------hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHH
Confidence 01246777889999999999999999877888999999999999999752 223456677
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHH
Q 003824 235 EHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECID 314 (793)
Q Consensus 235 ~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~ 314 (793)
+..++++.+|+||+++|||+++.++. ++ + ...|+|++|+|+++++||+|++++++|+
T Consensus 504 ~~~~~~a~~G~rvlavA~k~~~~~~~-~~-------------~---------~~~e~~l~~lGli~~~Dp~R~~a~~aI~ 560 (902)
T PRK10517 504 RVTDTLNRQGLRVVAVATKYLPAREG-DY-------------Q---------RADESDLILEGYIAFLDPPKETTAPALK 560 (902)
T ss_pred HHHHHHHhcCCEEEEEEEecCCcccc-cc-------------c---------cccccCceeeehHhhhCcchhhHHHHHH
Confidence 88899999999999999998865321 00 0 1136899999999999999999999999
Q ss_pred HHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccc
Q 003824 315 KLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSS 394 (793)
Q Consensus 315 ~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (793)
.|+++||+|+|+|||++.||.+||+++||....
T Consensus 561 ~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~----------------------------------------------- 593 (902)
T PRK10517 561 ALKASGVTVKILTGDSELVAAKVCHEVGLDAGE----------------------------------------------- 593 (902)
T ss_pred HHHHCCCEEEEEcCCCHHHHHHHHHHcCCCccC-----------------------------------------------
Confidence 999999999999999999999999999994210
Q ss_pred cCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcc
Q 003824 395 NESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 474 (793)
Q Consensus 395 ~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~Ad 474 (793)
+++|..++.+.++++.+... .+ .||+|++|+||.++|+.+|+ .|++|+|+|||+||+|||++||
T Consensus 594 ---------v~~G~el~~l~~~el~~~~~----~~--~VfAr~sPe~K~~IV~~Lq~-~G~vVam~GDGvNDaPALk~AD 657 (902)
T PRK10517 594 ---------VLIGSDIETLSDDELANLAE----RT--TLFARLTPMHKERIVTLLKR-EGHVVGFMGDGINDAPALRAAD 657 (902)
T ss_pred ---------ceeHHHHHhCCHHHHHHHHh----hC--cEEEEcCHHHHHHHHHHHHH-CCCEEEEECCCcchHHHHHhCC
Confidence 56666666554444443333 23 39999999999999999998 8999999999999999999999
Q ss_pred eeEEeccCCcccccccCCeeecchh--hHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhH
Q 003824 475 IGVGISGVEGMQAVMSSDIAIAQFR--FLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDW 552 (793)
Q Consensus 475 vGI~i~g~~~~~a~~~aD~~i~~f~--~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~ 552 (793)
|||+|++ ....|+++||+++.+.+ .+..+ +.+||.+|.|+++++.|.+..|+..++..++..++. +..++.+.
T Consensus 658 VGIAmg~-gtdvAkeaADiVLldd~~~~I~~a-i~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~---~~~pl~~~ 732 (902)
T PRK10517 658 IGISVDG-AVDIAREAADIILLEKSLMVLEEG-VIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL---PFLPMLPL 732 (902)
T ss_pred EEEEeCC-cCHHHHHhCCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh---hhhhhHHH
Confidence 9999953 22349999999999855 48888 899999999999999999999999988888776663 22468999
Q ss_pred HHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCC
Q 003824 553 FLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKG 632 (793)
Q Consensus 553 ~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 632 (793)
|++|.|++++ +|.++++.++ ++..+|+.|+-+ +... ....++..|++.+++.+..+++.+.. ++..
T Consensus 733 qiL~inl~~D-~~~~al~~d~---~~~~~m~~p~r~----~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~ 798 (902)
T PRK10517 733 HLLIQNLLYD-VSQVAIPFDN---VDDEQIQKPQRW----NPAD----LGRFMVFFGPISSIFDILTFCLMWWV--FHAN 798 (902)
T ss_pred HHHHHHHHHH-HhHHhhcCCC---CChhhhcCCCCC----CHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH--cccc
Confidence 9999999999 7999998754 344455666621 1111 22223455555554443333322111 0000
Q ss_pred CceeehhhHHHHHHHHHHHHHHHHHHH-HhcchhhHHHHHHHHHHHHHHHHHHHHhccC--ccccchhHHHHHHHhccC-
Q 003824 633 GEVIGLEILGTTMYTCVVWVVNCQMAL-SVTYFTYIQHLFIWGGITFWYIFLLAYGAMD--PYISTTAYKVFIEACAPA- 708 (793)
Q Consensus 633 g~~~~~~~~~t~~f~~~v~~~~~~~~l-~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~--~~~~~~~~~~~~~~~~~s- 708 (793)
.. .....+.+..|+.+++.+.+..+. +++...++.+...|..+++.++++++..++| + ++. +|+..+++
T Consensus 799 ~~-~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~-----~~~~~~l~~ 871 (902)
T PRK10517 799 TP-ETQTLFQSGWFVVGLLSQTLIVHMIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSP-LAS-----YLQLQALPL 871 (902)
T ss_pred ch-hhHhHHHHHHHHHHHHHHHHHHHhhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHH-HHH-----hhCCcCCCh
Confidence 00 000124445577777777776542 2222245577778888888888888878887 3 233 66677777
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003824 709 -PSFWLITLLVLMSSLLPYFTYSAIQMRF 736 (793)
Q Consensus 709 -~~~wl~~l~~~~~~ll~~~i~k~~~~~~ 736 (793)
+..|+.++.++.+ ++....-+.+.|+|
T Consensus 872 ~~~~~~~~~~~~~~-~~~e~~K~~~~~~~ 899 (902)
T PRK10517 872 SYFPWLVAILAGYM-TLTQLVKGFYSRRY 899 (902)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHhh
Confidence 5667666665555 33333333444433
No 16
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=2e-67 Score=628.76 Aligned_cols=526 Identities=18% Similarity=0.171 Sum_probs=382.3
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.++++++|+++++|+||++++||||||||||+|+|++.++.... . .
T Consensus 316 ~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~----~-~--------------------------- 363 (867)
T TIGR01524 316 NMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSS----G-E--------------------------- 363 (867)
T ss_pred HHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCC----C-C---------------------------
Confidence 4568899999999999999999999999999999999998864110 0 0
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
..++++...++|+... . ..+||.|.|+++++.+.+...
T Consensus 364 ------------------------~~~~~l~~a~l~~~~~----~-------~~~~p~~~Al~~~~~~~~~~~------- 401 (867)
T TIGR01524 364 ------------------------TSERVLKMAWLNSYFQ----T-------GWKNVLDHAVLAKLDESAARQ------- 401 (867)
T ss_pred ------------------------CHHHHHHHHHHhCCCC----C-------CCCChHHHHHHHHHHhhchhh-------
Confidence 0123344444443321 0 135999999999987532110
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhc---------chhhHHHHH
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTK 234 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~ 234 (793)
....|+.+..+||||+||||+++++++++.+.+++||||+.|+++|+.. +++.++.+.
T Consensus 402 -------------~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 468 (867)
T TIGR01524 402 -------------TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQ 468 (867)
T ss_pred -------------HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHH
Confidence 1245677888999999999999999876678899999999999999753 223456778
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHH
Q 003824 235 EHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECID 314 (793)
Q Consensus 235 ~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~ 314 (793)
+.+++++.+|+|++++|||+++.++.+ + .+..|++|+|+|+++++||+|++++++|+
T Consensus 469 ~~~~~~a~~G~rvlavA~~~~~~~~~~-~----------------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~ 525 (867)
T TIGR01524 469 DMTAEMNRQGIRVIAVATKTLKVGEAD-F----------------------TKTDEEQLIIEGFLGFLDPPKESTKEAIA 525 (867)
T ss_pred HHHHHHHhcCCEEEEEEEeccCccccc-c----------------------cccccCCcEEEEEEEeeCCCchhHHHHHH
Confidence 888999999999999999998654310 0 01236899999999999999999999999
Q ss_pred HHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccc
Q 003824 315 KLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSS 394 (793)
Q Consensus 315 ~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (793)
+|+++||+++|+|||+..||.+||+++||..+.
T Consensus 526 ~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~----------------------------------------------- 558 (867)
T TIGR01524 526 ALFKNGINVKVLTGDNEIVTARICQEVGIDAND----------------------------------------------- 558 (867)
T ss_pred HHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-----------------------------------------------
Confidence 999999999999999999999999999995321
Q ss_pred cCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcc
Q 003824 395 NESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 474 (793)
Q Consensus 395 ~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~Ad 474 (793)
+++|..++...++++.+.. . +..||+|++|+||.++|+.+|+ .|++|+|+|||.||+|||++||
T Consensus 559 ---------v~~g~~l~~~~~~el~~~~----~--~~~vfAr~~Pe~K~~iV~~lq~-~G~vVam~GDGvNDapALk~Ad 622 (867)
T TIGR01524 559 ---------FLLGADIEELSDEELAREL----R--KYHIFARLTPMQKSRIIGLLKK-AGHTVGFLGDGINDAPALRKAD 622 (867)
T ss_pred ---------eeecHhhhhCCHHHHHHHh----h--hCeEEEECCHHHHHHHHHHHHh-CCCEEEEECCCcccHHHHHhCC
Confidence 4555555544333333322 2 3349999999999999999998 8999999999999999999999
Q ss_pred eeEEeccCCcccccccCCeeecchh--hHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhH
Q 003824 475 IGVGISGVEGMQAVMSSDIAIAQFR--FLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDW 552 (793)
Q Consensus 475 vGI~i~g~~~~~a~~~aD~~i~~f~--~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~ 552 (793)
|||+|++ ....|+++||+++.+.+ .+..+ +.+||.+|+|+++++.|.+..|+..++..++..++. +..++.+.
T Consensus 623 VGIAmg~-gtdvAk~aADiVLldd~~~~I~~a-i~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~~ 697 (867)
T TIGR01524 623 VGISVDT-AADIAKEASDIILLEKSLMVLEEG-VIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFI---PFLPMLSL 697 (867)
T ss_pred EEEEeCC-ccHHHHHhCCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---hhhhHHHH
Confidence 9999963 22338999999999844 58888 899999999999999999999999888777766553 22469999
Q ss_pred HHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCC
Q 003824 553 FLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKG 632 (793)
Q Consensus 553 ~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 632 (793)
|++|.|++++ +|+++++.++ ++...|+.|+- ++.+ .....++..|++.+++.+..++..+.... ..
T Consensus 698 qil~inl~~d-~~~~al~~~~---~~~~~m~~p~~----~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~ 763 (867)
T TIGR01524 698 HLLIQNLLYD-FSQLTLPWDK---MDREFLKKPHQ----WEQK----GMGRFMLCIGPVSSIFDIATFLLMWFVFS--AN 763 (867)
T ss_pred HHHHHHHHHH-HHHHhhcCCC---CChHhhCCCCC----CChh----hHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cc
Confidence 9999999999 7999998753 44445566762 2222 22223444555554443333222111100 01
Q ss_pred CceeehhhHHHHHHHHHHHHHHHHHHHHhcch--hhHHHHHHHHHHHHHHHHHHHHhccCcc-ccchhHHHHHHHhcc--
Q 003824 633 GEVIGLEILGTTMYTCVVWVVNCQMALSVTYF--TYIQHLFIWGGITFWYIFLLAYGAMDPY-ISTTAYKVFIEACAP-- 707 (793)
Q Consensus 633 g~~~~~~~~~t~~f~~~v~~~~~~~~l~~~~~--~~~~~~~i~~si~~~~i~~~i~~~i~~~-~~~~~~~~~~~~~~~-- 707 (793)
+. .....+.+..|+.+++.+.+.++ ..++. .++.|...+..+++.++++++..++|+. ++. +|+..++
T Consensus 764 ~~-~~~~~~~t~~f~~~~~~~~~~~~-~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~f~~~~l~~ 836 (867)
T TIGR01524 764 TV-EEQALFQSGWFVVGLLSQTLVVH-MIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGH-----SIGLVSLPL 836 (867)
T ss_pred ch-hhhhHHHHHHHHHHHHHHHHHHH-hhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhh-----hhccccCCc
Confidence 11 01113456778888888777764 33332 4456788888888888888888888852 233 5666655
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHH
Q 003824 708 APSFWLITLLVLMSSLLPYFTYS 730 (793)
Q Consensus 708 s~~~wl~~l~~~~~~ll~~~i~k 730 (793)
++..|+.++.++++ +...+.|
T Consensus 837 ~~~~~~~~~~~~~~--~~~e~~k 857 (867)
T TIGR01524 837 SYFPWLIAILVGYM--ATMQLVK 857 (867)
T ss_pred cHHHHHHHHHHHHH--HHHHHHH
Confidence 44557666655554 3344444
No 17
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-69 Score=587.11 Aligned_cols=611 Identities=20% Similarity=0.237 Sum_probs=466.9
Q ss_pred cCCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcc
Q 003824 3 YEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDK 82 (793)
Q Consensus 3 ~~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (793)
++|.+++++||++.++|+||...+||||||||||+|+|+|.++|.++.....+..+... +.
T Consensus 345 krMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~------~~------------- 405 (1019)
T KOG0203|consen 345 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQS------GQ------------- 405 (1019)
T ss_pred HHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhh------cc-------------
Confidence 35678999999999999999999999999999999999999999987654433221100 00
Q ss_pred cccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCC--ceeeecCCccHHHHHHHHHHcCCEEEeec
Q 003824 83 ASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENG--KISYEAESPDEAAFVIAARELGFEFYERT 160 (793)
Q Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~--~~~y~~~sp~E~Alv~~a~~~g~~~~~r~ 160 (793)
. ....++....+.++..+||.+.....+..- .-.-..+++.|.||++++.-.-....
T Consensus 406 ------~------------~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~--- 464 (1019)
T KOG0203|consen 406 ------S------------FDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVM--- 464 (1019)
T ss_pred ------c------------ccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHH---
Confidence 0 011245577899999999999876433211 11223589999999999875432211
Q ss_pred CceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCC---CcEEEEEecCchHhHHHHhhc---------chh
Q 003824 161 QTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE---GTLLLLSKGADSVMFERLAEN---------GRE 228 (793)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~---~~~~l~~KGa~~~i~~~~~~~---------~~~ 228 (793)
..+..++.+..+||+|++|+.-.+.+.++ .++.+.+|||||.++++|+.. ++.
T Consensus 465 ---------------~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~ 529 (1019)
T KOG0203|consen 465 ---------------ELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEK 529 (1019)
T ss_pred ---------------HHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHH
Confidence 13467888899999999999999998765 578999999999999999863 345
Q ss_pred hHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCC
Q 003824 229 FEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNG 308 (793)
Q Consensus 229 ~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~ 308 (793)
..+.+.+...++...|-||+.+|++.++++++.+.-+-.-+. -+.--.+|.|+|++++-||+|..
T Consensus 530 ~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~---------------~n~p~~nl~FlGl~s~idPPR~~ 594 (1019)
T KOG0203|consen 530 LKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDD---------------VNFPTDNLRFLGLISMIDPPRAA 594 (1019)
T ss_pred HHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCC---------------CCCcchhccccchhhccCCCccc
Confidence 677888889999999999999999999987654321110000 01123689999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhh
Q 003824 309 VPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGK 388 (793)
Q Consensus 309 v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (793)
+|+++..++.|||||+|+|||++.||.+||++.||+..+.... +.+..+.....
T Consensus 595 vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~--------------------------e~~a~r~~~~v 648 (1019)
T KOG0203|consen 595 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETV--------------------------EDIAKRLNIPV 648 (1019)
T ss_pred CchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhh--------------------------hhhHHhcCCcc
Confidence 9999999999999999999999999999999999987553211 00111111111
Q ss_pred hccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChh
Q 003824 389 ELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVG 468 (793)
Q Consensus 389 ~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ 468 (793)
.+. +.....+.++.|.++..+.+++ +.++.....-.||+|.||+||..||+..|+ .|.+|+.+|||.||+|
T Consensus 649 ~~v----n~~~a~a~VihG~eL~~~~~~q----ld~il~nh~eIVFARTSPqQKLiIVe~cQr-~GaiVaVTGDGVNDsP 719 (1019)
T KOG0203|consen 649 EQV----NSRDAKAAVIHGSELPDMSSEQ----LDELLQNHQEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSP 719 (1019)
T ss_pred ccc----CccccceEEEecccccccCHHH----HHHHHHhCCceEEEecCccceEEeEhhhhh-cCcEEEEeCCCcCCCh
Confidence 111 1233578899999988666544 445555667789999999999999999998 9999999999999999
Q ss_pred hhhhcceeEEe--ccCCcccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhccc
Q 003824 469 MLQEADIGVGI--SGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFS 544 (793)
Q Consensus 469 ml~~AdvGI~i--~g~~~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s 544 (793)
|||.||||||| +|++. +|+|||.++.|++| ++.- +.+||.+|+|++|.|.|++..|+..+.+.++|.++
T Consensus 720 ALKKADIGVAMGiaGSDv--sKqAADmILLDDNFASIVtG-VEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~---- 792 (1019)
T KOG0203|consen 720 ALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILF---- 792 (1019)
T ss_pred hhcccccceeeccccchH--HHhhcceEEecCcchhheee-cccceehhhhHHHHHHHHHHhcchhHhHHHHHHHh----
Confidence 99999999976 66666 89999999999777 6655 78999999999999999999999999999988877
Q ss_pred Cccc-chhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHH-HHHHHHHHHHHHHHHHHHHH
Q 003824 545 GQPV-YNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRI-LGWALNGVANAAIIFFFCIH 622 (793)
Q Consensus 545 ~~~~-~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~-~~~~~~~~~~~~~~f~~~~~ 622 (793)
|.|+ +..++++.+.+..+..|++.++++. +..+.|++.|+ ....+++.|.+.+ +.++..|.+|++..|+.++.
T Consensus 793 giPLplgtitIL~IDLgTDmvPAiSLAYE~--aEsDIM~r~PR---~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFv 867 (1019)
T KOG0203|consen 793 GIPLPLGTVTILCIDLGTDIVPAISLAYEK--AESDIMLRPPR---NPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFV 867 (1019)
T ss_pred CCCcccchhhhhhhHhhcccchhhhHhccC--chhhHHhcCCC---CCcccccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555 7889999999999999999999874 44555566666 2356788888874 67889999999999999988
Q ss_pred Hhcccccc---------------------CCCceeeh-------hhHHHHHHHHHHHHHHHHHHHH-hcchh----hHHH
Q 003824 623 AMKQQAFR---------------------KGGEVIGL-------EILGTTMYTCVVWVVNCQMALS-VTYFT----YIQH 669 (793)
Q Consensus 623 ~~~~~~~~---------------------~~g~~~~~-------~~~~t~~f~~~v~~~~~~~~l~-~~~~~----~~~~ 669 (793)
.+...++. +.|+.... +...+.-|.+++.++...+++. ++.-+ -+.|
T Consensus 868 ima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN 947 (1019)
T KOG0203|consen 868 IMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRN 947 (1019)
T ss_pred HHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhh
Confidence 87765551 11322221 1233444555666665555432 33333 3466
Q ss_pred HHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003824 670 LFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRF 736 (793)
Q Consensus 670 ~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~ 736 (793)
..+++++++-.++..++.|.|+ ... .++..++.+.+|+..+..+++.++.+++.|++.|.|
T Consensus 948 ~vl~f~v~~e~~La~fl~y~pg-~~~-----~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~ 1008 (1019)
T KOG0203|consen 948 KVLIFAVIFETCLACFLCYCPG-VLY-----ALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRY 1008 (1019)
T ss_pred hhHHHHHHHHHHHHHHHhcCcc-HHH-----HhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhC
Confidence 7788888888888888888886 233 666778889999999999999999999999988865
No 18
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-62 Score=546.00 Aligned_cols=540 Identities=20% Similarity=0.272 Sum_probs=378.1
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
+-+++++.|-++.-+-.-|+++++||||||||||+.+.+-.+.+-...-.. ..+. ....+.+
T Consensus 448 RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~-~~~~--~~~~~~~--------------- 509 (1140)
T KOG0208|consen 448 RLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDD-GPEL--KVVTEDS--------------- 509 (1140)
T ss_pred HHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccc-cchh--hhhhhhh---------------
Confidence 346789999999999999999999999999999999999888753211000 0000 0000000
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeec---
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERT--- 160 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~--- 160 (793)
. +++..... +........+..++|.||+.....+. ..|+|.|.-+.+. .|+.+.+..
T Consensus 510 ---~------~~~~~l~~-~~~~~~~~~~~~a~atCHSL~~v~g~-------l~GDPLdlkmfe~---t~w~~ee~~~~~ 569 (1140)
T KOG0208|consen 510 ---L------QLFYKLSL-RSSSLPMGNLVAAMATCHSLTLVDGT-------LVGDPLDLKMFES---TGWVYEEADIED 569 (1140)
T ss_pred ---c------cceeeccc-cccCCchHHHHHHHhhhceeEEeCCe-------eccCceeeeeeec---cceEEEeccccc
Confidence 0 00000000 01111245788999999988765332 1357777666554 566664421
Q ss_pred ------C--ceeEEEecC---CCCCccceeEeEEeEeeCCCCCCceEEEEEEcC-CCcEEEEEecCchHhHHHHhhcchh
Q 003824 161 ------Q--TSISVHELD---PVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE-EGTLLLLSKGADSVMFERLAENGRE 228 (793)
Q Consensus 161 ------~--~~~~i~~~~---~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~ 228 (793)
. ....++... +......+..+.+++.+||+|.-+||||||+++ +.+..+|+|||||.|.+.|++. .
T Consensus 570 ~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~--t 647 (1140)
T KOG0208|consen 570 EATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE--T 647 (1140)
T ss_pred hhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc--c
Confidence 0 011122211 111111123799999999999999999999997 4678999999999999999876 5
Q ss_pred hHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCC
Q 003824 229 FEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNG 308 (793)
Q Consensus 229 ~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~ 308 (793)
.++++.+.++.|+.+|+|++++|+|.++.. .|.+. ....++.+|.||+|+|++.+|++||++
T Consensus 648 vP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~~---------------~~~~Rd~vEs~l~FlGLiVmeNkLK~~ 709 (1140)
T KOG0208|consen 648 VPADYQEVLKEYTHQGFRVIALASKELETS---TLQKA---------------QKLSRDTVESNLEFLGLIVMENKLKEE 709 (1140)
T ss_pred CCccHHHHHHHHHhCCeEEEEEecCccCcc---hHHHH---------------hhccHhhhhccceeeEEEEeecccccc
Confidence 788999999999999999999999999875 23221 122347899999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccc-----hhhhHHHHHHHHHHHHHHH
Q 003824 309 VPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLE-----KSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 309 v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+|+.|++|+|+++|+||||..||+.+|++||++.+....+.......+..... ..+........ ++
T Consensus 710 T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~------~~ 783 (1140)
T KOG0208|consen 710 TKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDP------KE 783 (1140)
T ss_pred cHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCC------Cc
Confidence 99999999999999999999999999999999999999888777665533222110 00000000000 00
Q ss_pred Hhhhhhccc--cccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEc
Q 003824 384 LIRGKELLD--SSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 461 (793)
Q Consensus 384 ~~~~~~~~~--~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 461 (793)
........+ ...-....+.+.++|+.++.++ .+..+.+.+++..+. |||||+|.||+++|+.+|+ .|+.|+|||
T Consensus 784 ~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~~~l~~~Il~~~~--VfARMsP~qK~~Lie~lQk-l~y~VgfCG 859 (1140)
T KOG0208|consen 784 PDPDLASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHFPELVPKILLKGT--VFARMSPDQKAELIEALQK-LGYKVGFCG 859 (1140)
T ss_pred cCccccCCccChhhhccceeEEEecCchhHHHH-hhcHHHHHHHHhcCe--EEeecCchhHHHHHHHHHh-cCcEEEecC
Confidence 000000000 0011245689999999999888 466677788887777 9999999999999999999 899999999
Q ss_pred CCccChhhhhhcceeEEeccCCcccccccCCeeec--chhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHH
Q 003824 462 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA--QFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEA 539 (793)
Q Consensus 462 DG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~--~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 539 (793)
||+|||+|||+|||||+++.+| |.-||.|+.. +.+....+ +.+||..+.--....+|+..++ +++|...+
T Consensus 860 DGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~v-IrEGRaALVTSf~~FkYMalYs----~iqFisv~ 931 (1140)
T KOG0208|consen 860 DGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPSISCVPDV-IREGRAALVTSFACFKYMALYS----AIQFISVV 931 (1140)
T ss_pred CCcchhhhhhhcccCcchhhhh---HhhcCccccCCCchhhHhHH-HhhhhhhhhhhHHHHHHHHHHH----HHHHHhhh
Confidence 9999999999999999998887 7889999988 45556666 9999998877666666664333 33444333
Q ss_pred HhcccCcccchhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHH
Q 003824 540 YASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFF 619 (793)
Q Consensus 540 ~~~~s~~~~~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 619 (793)
+..+ -...+.+.|.+..+++....-+++++.++ +..+..... |...+++++.+...+++.++..++-+.+
T Consensus 932 ~LY~-~~~nl~D~Qfl~iDLlii~pia~~m~~~~--a~~~L~~~r-------P~~~L~s~~~~~~l~~q~vli~l~q~i~ 1001 (1140)
T KOG0208|consen 932 FLYL-INSNLGDLQFLFIDLLIITPIAVMMSRFD--ASDKLFPKR-------PPTNLLSKKILVPLLLQIVLICLVQWIL 1001 (1140)
T ss_pred eeee-ecccccchhhhhhHHHHHHHHHHHHccCc--HHHHhcCCC-------CCccccccchhhhhHHHHHHHHHHHHhh
Confidence 3322 23458999999999998755556666543 333333333 3477888888888888888887777777
Q ss_pred HHHHhccccc
Q 003824 620 CIHAMKQQAF 629 (793)
Q Consensus 620 ~~~~~~~~~~ 629 (793)
++..-..+++
T Consensus 1002 ~l~~~~qpw~ 1011 (1140)
T KOG0208|consen 1002 TLIVEPQPWY 1011 (1140)
T ss_pred heeeccccce
Confidence 7665554444
No 19
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=3.7e-61 Score=567.91 Aligned_cols=452 Identities=20% Similarity=0.269 Sum_probs=345.5
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.++++++|+++++|+||.+++||+|||||||+|+|++.+++..+..+.
T Consensus 266 r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~------------------------------ 315 (755)
T TIGR01647 266 ELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFD------------------------------ 315 (755)
T ss_pred HHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCC------------------------------
Confidence 35688999999999999999999999999999999999999875431100
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
.++++...++|+.. .++||.|.|+++++++.+.
T Consensus 316 -------------------------~~~~l~~a~~~~~~-------------~~~~pi~~Ai~~~~~~~~~--------- 348 (755)
T TIGR01647 316 -------------------------KDDVLLYAALASRE-------------EDQDAIDTAVLGSAKDLKE--------- 348 (755)
T ss_pred -------------------------HHHHHHHHHHhCCC-------------CCCChHHHHHHHHHHHhHH---------
Confidence 12345556666520 1369999999998876430
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCC-CcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHh
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE-GTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYAD 242 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 242 (793)
....|++++.+||+|.+|+|++++++++ |+.++++||||+.|+++|+.. .+.++++.+.+++++.
T Consensus 349 -------------~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-~~~~~~~~~~~~~~~~ 414 (755)
T TIGR01647 349 -------------ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-KEIEEKVEEKVDELAS 414 (755)
T ss_pred -------------HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-HHHHHHHHHHHHHHHh
Confidence 0145677889999999999999998764 778899999999999999754 2456678888999999
Q ss_pred ccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCe
Q 003824 243 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIK 322 (793)
Q Consensus 243 ~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIk 322 (793)
+|+|++++|+|+. |++|+|+|+++++||+|++++++|+.|+++||+
T Consensus 415 ~G~rvl~vA~~~~----------------------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~ 460 (755)
T TIGR01647 415 RGYRALGVARTDE----------------------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVE 460 (755)
T ss_pred CCCEEEEEEEEcC----------------------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCe
Confidence 9999999999721 378999999999999999999999999999999
Q ss_pred EEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeE
Q 003824 323 LWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLA 402 (793)
Q Consensus 323 v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (793)
++|+|||++.||.+||+++||..+. +.++.
T Consensus 461 v~miTGD~~~tA~~IA~~lGI~~~~-----~~~~~--------------------------------------------- 490 (755)
T TIGR01647 461 VKMVTGDHLAIAKETARRLGLGTNI-----YTADV--------------------------------------------- 490 (755)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCC-----cCHHH---------------------------------------------
Confidence 9999999999999999999996421 00000
Q ss_pred EEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccC
Q 003824 403 LIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGV 482 (793)
Q Consensus 403 lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~ 482 (793)
+.+|+.++.+.++++.+ +...+ .+|+|++|+||.++|+.+|+ .|++|+|+|||.||+|+|++|||||+|++
T Consensus 491 -l~~~~~~~~~~~~~~~~----~~~~~--~vfAr~~Pe~K~~iV~~lq~-~G~~VamvGDGvNDapAL~~AdVGIAm~~- 561 (755)
T TIGR01647 491 -LLKGDNRDDLPSGELGE----MVEDA--DGFAEVFPEHKYEIVEILQK-RGHLVGMTGDGVNDAPALKKADVGIAVAG- 561 (755)
T ss_pred -hcCCcchhhCCHHHHHH----HHHhC--CEEEecCHHHHHHHHHHHHh-cCCEEEEEcCCcccHHHHHhCCeeEEecC-
Confidence 11122221122222222 22233 39999999999999999998 89999999999999999999999999953
Q ss_pred CcccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHHHHHHh
Q 003824 483 EGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVF 560 (793)
Q Consensus 483 ~~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~ 560 (793)
....|+++||+++.+.++ +..+ +.+||..|.|+++++.|.+..|+..++..++..++.++ + ++++|++|.|++
T Consensus 562 gtdvAkeaADivLl~d~l~~I~~a-i~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~---~-l~~~~il~~~l~ 636 (755)
T TIGR01647 562 ATDAARSAADIVLTEPGLSVIVDA-ILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF---Y-FPPIMVVIIAIL 636 (755)
T ss_pred CcHHHHHhCCEEEEcCChHHHHHH-HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc---c-hhHHHHHHHHHH
Confidence 233389999999998554 8888 89999999999999999999999988776666554432 3 899999999999
Q ss_pred hccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCCceeehh
Q 003824 561 FTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAF-RKGGEVIGLE 639 (793)
Q Consensus 561 ~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~-~~~g~~~~~~ 639 (793)
.+. |.+++++++.+++ ++|+ ...++ ..+...+..|++.++..|.++++.+....+ ...+......
T Consensus 637 ~d~-~~~~l~~~~~~~~-----~~p~-------~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (755)
T TIGR01647 637 NDG-TIMTIAYDNVKPS-----KLPQ-------RWNLR-EVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHG 702 (755)
T ss_pred HhH-hHhhccCCCCCCC-----CCCC-------ccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHh
Confidence 995 7999987664322 3333 22233 555666788888888877777665531101 1111111233
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 003824 640 ILGTTMYTCVVWVVNCQMA 658 (793)
Q Consensus 640 ~~~t~~f~~~v~~~~~~~~ 658 (793)
.+.|++|+.+++.+.+.++
T Consensus 703 ~~~t~~f~~~~~~~~~~~~ 721 (755)
T TIGR01647 703 NLQSLIYLQVSISGQATIF 721 (755)
T ss_pred hhHHHHHHHHHHHHHHHHh
Confidence 5789999999998888875
No 20
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=7.6e-51 Score=464.26 Aligned_cols=353 Identities=20% Similarity=0.248 Sum_probs=277.2
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.++++++|+++++|+||++++||+|||||||+|++.+.++...+.
T Consensus 278 r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~--------------------------------- 324 (673)
T PRK14010 278 RVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS--------------------------------- 324 (673)
T ss_pred HHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC---------------------------------
Confidence 56789999999999999999999999999999996665555321100
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
...++++.+.++|+.. +.||.+.|+++++++.|+....
T Consensus 325 -----------------------~~~~~ll~~a~~~~~~--------------s~~P~~~AIv~~a~~~~~~~~~----- 362 (673)
T PRK14010 325 -----------------------SSFERLVKAAYESSIA--------------DDTPEGRSIVKLAYKQHIDLPQ----- 362 (673)
T ss_pred -----------------------ccHHHHHHHHHHhcCC--------------CCChHHHHHHHHHHHcCCCchh-----
Confidence 0123456667777542 2499999999999987653210
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhc
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADA 243 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (793)
......||++++|+|++.++ ++ .+.|||++.++++|...+.....++.+..++++++
T Consensus 363 ------------------~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~ 419 (673)
T PRK14010 363 ------------------EVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKK 419 (673)
T ss_pred ------------------hhcceeccccccceeEEEEC---CE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhC
Confidence 00123799999999999754 33 45699999999999865433444566777889999
Q ss_pred cceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeE
Q 003824 244 GLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKL 323 (793)
Q Consensus 244 G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv 323 (793)
|+|+++++ .|++++|+++++|++|+|++++|++||++||++
T Consensus 420 G~~~l~v~---------------------------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~v 460 (673)
T PRK14010 420 GGTPLVVL---------------------------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIET 460 (673)
T ss_pred CCeEEEEE---------------------------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeE
Confidence 99999877 477899999999999999999999999999999
Q ss_pred EEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEE
Q 003824 324 WVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 403 (793)
Q Consensus 324 ~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 403 (793)
+|+|||+..||.+||+++|+..
T Consensus 461 vMiTGDn~~TA~aIA~elGI~~---------------------------------------------------------- 482 (673)
T PRK14010 461 VMCTGDNELTAATIAKEAGVDR---------------------------------------------------------- 482 (673)
T ss_pred EEECCCCHHHHHHHHHHcCCce----------------------------------------------------------
Confidence 9999999999999999999831
Q ss_pred EEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCC
Q 003824 404 IIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 483 (793)
Q Consensus 404 vi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~ 483 (793)
+++|++|+||.++|+.+|+ .|++|+|+|||.||+|+|++|||||+|+ +.
T Consensus 483 -----------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDGvNDAPALa~ADVGIAMg-sG 531 (673)
T PRK14010 483 -----------------------------FVAECKPEDKINVIREEQA-KGHIVAMTGDGTNDAPALAEANVGLAMN-SG 531 (673)
T ss_pred -----------------------------EEcCCCHHHHHHHHHHHHh-CCCEEEEECCChhhHHHHHhCCEEEEeC-CC
Confidence 8999999999999999998 8999999999999999999999999995 22
Q ss_pred cccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhH---------
Q 003824 484 GMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDW--------- 552 (793)
Q Consensus 484 ~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~--------- 552 (793)
...|+++||+++.+.++ +..+ +.+||..|.|+++++.|++..|+..++..+...|...+.+...+|-+
T Consensus 532 TdvAkeAADiVLldd~ls~Iv~a-v~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~ 610 (673)
T PRK14010 532 TMSAKEAANLIDLDSNPTKLMEV-VLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAMNHLNIMHLHSPESAV 610 (673)
T ss_pred CHHHHHhCCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHHHhcccchhhccccCCChHHHH
Confidence 33399999999998554 8888 89999999999999999999999988887776665444333323221
Q ss_pred -HHHHHHHhh--ccccceeeecccCCCChHHhhh
Q 003824 553 -FLSLYNVFF--TSLPVIALGVFDQDVSARFCLK 583 (793)
Q Consensus 553 -~~l~~n~~~--~~lp~l~l~~~~~~~~~~~~~~ 583 (793)
.-+.||-+. ..+|.-.-|+-.++.+...+++
T Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (673)
T PRK14010 611 LSALIFNALIIVLLIPIAMKGVKFKGASTQTILM 644 (673)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHh
Confidence 124456543 2345555566666666655443
No 21
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=3.7e-49 Score=450.82 Aligned_cols=356 Identities=21% Similarity=0.264 Sum_probs=274.1
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.++++++|++.++|+||++|+||+|||||||+|+|.+.+++..+..
T Consensus 278 r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~-------------------------------- 325 (679)
T PRK01122 278 RVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV-------------------------------- 325 (679)
T ss_pred HHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC--------------------------------
Confidence 467899999999999999999999999999999999999887532100
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHH-cCCEEEeecCc
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARE-LGFEFYERTQT 162 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~-~g~~~~~r~~~ 162 (793)
..++++.+.++|+.. ..||...|++++|++ .|+....
T Consensus 326 ------------------------~~~~ll~~a~~~s~~--------------s~hP~~~AIv~~a~~~~~~~~~~---- 363 (679)
T PRK01122 326 ------------------------TEEELADAAQLSSLA--------------DETPEGRSIVVLAKQRFNLRERD---- 363 (679)
T ss_pred ------------------------CHHHHHHHHHHhcCC--------------CCCchHHHHHHHHHhhcCCCchh----
Confidence 012456667777543 248999999999986 3432110
Q ss_pred eeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHh
Q 003824 163 SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYAD 242 (793)
Q Consensus 163 ~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 242 (793)
..++.....||++.+|+|++.+. | ..|+|||++.+++.|...+.+.++++.+.++++++
T Consensus 364 ----------------~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~ 422 (679)
T PRK01122 364 ----------------LQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVAR 422 (679)
T ss_pred ----------------hccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHh
Confidence 12445667899999998888653 3 57999999999999976554556778888899999
Q ss_pred ccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCe
Q 003824 243 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIK 322 (793)
Q Consensus 243 ~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIk 322 (793)
+|+|++++| .|++++|+++++|++|+|++++|++||++||+
T Consensus 423 ~G~~~l~va---------------------------------------~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~ 463 (679)
T PRK01122 423 KGGTPLVVA---------------------------------------EDNRVLGVIYLKDIVKPGIKERFAELRKMGIK 463 (679)
T ss_pred CCCcEEEEE---------------------------------------ECCeEEEEEEEeccCchhHHHHHHHHHHCCCe
Confidence 999999999 36789999999999999999999999999999
Q ss_pred EEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeE
Q 003824 323 LWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLA 402 (793)
Q Consensus 323 v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (793)
++|+|||++.||.+||+++|+..
T Consensus 464 vvMiTGDn~~TA~aIA~elGId~--------------------------------------------------------- 486 (679)
T PRK01122 464 TVMITGDNPLTAAAIAAEAGVDD--------------------------------------------------------- 486 (679)
T ss_pred EEEECCCCHHHHHHHHHHcCCcE---------------------------------------------------------
Confidence 99999999999999999999821
Q ss_pred EEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccC
Q 003824 403 LIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGV 482 (793)
Q Consensus 403 lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~ 482 (793)
+++|++|+||.++|+.+|+ .|+.|+|+|||.||+|||++|||||+|+ +
T Consensus 487 ------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDGvNDAPALa~ADVGIAMg-s 534 (679)
T PRK01122 487 ------------------------------FLAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQADVGVAMN-S 534 (679)
T ss_pred ------------------------------EEccCCHHHHHHHHHHHHH-cCCeEEEECCCcchHHHHHhCCEeEEeC-C
Confidence 8999999999999999998 8999999999999999999999999995 2
Q ss_pred CcccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhH--------
Q 003824 483 EGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDW-------- 552 (793)
Q Consensus 483 ~~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~-------- 552 (793)
....|+++||+++.+.++ +..+ +.+||...-.-..+..|++.-.++-.|..+-..|...+.+...+|-+
T Consensus 535 GTdvAkeAADiVLldd~~s~Iv~a-v~~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~~~~~~~~~~~~~l~~~~~~ 613 (679)
T PRK01122 535 GTQAAKEAGNMVDLDSNPTKLIEV-VEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAATYPQLNALNIMHLHSPQSA 613 (679)
T ss_pred CCHHHHHhCCEEEeCCCHHHHHHH-HHHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHhhCccccccccccCCChHHH
Confidence 223399999999998554 7777 89999999766667778877555444433333333222222222221
Q ss_pred --HHHHHHHhh--ccccceeeecccCCCChHHhhh
Q 003824 553 --FLSLYNVFF--TSLPVIALGVFDQDVSARFCLK 583 (793)
Q Consensus 553 --~~l~~n~~~--~~lp~l~l~~~~~~~~~~~~~~ 583 (793)
.-+.||-+. ..+|.-.-|+-.++.+...+++
T Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (679)
T PRK01122 614 ILSALIFNALIIVALIPLALKGVKYRPLSAAALLR 648 (679)
T ss_pred HHHHHHHHHHHHHHhHHHHhcCccccccCHHHHHh
Confidence 124566544 2355555666666666655443
No 22
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-48 Score=419.65 Aligned_cols=594 Identities=20% Similarity=0.238 Sum_probs=366.7
Q ss_pred CceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccccCCC
Q 003824 9 PARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGF 88 (793)
Q Consensus 9 ~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (793)
++.|..+=-+==.|+||+.|||||||||+..|.|..+.-... .....
T Consensus 464 ~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~--~~~~~------------------------------- 510 (1160)
T KOG0209|consen 464 GVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSA--DEGAL------------------------------- 510 (1160)
T ss_pred ceeecCccccccCCceeEEEecCCCccccccEEEEecccccC--Ccccc-------------------------------
Confidence 444444444455799999999999999999999987632111 00000
Q ss_pred CcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCceeEEEe
Q 003824 89 NFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHE 168 (793)
Q Consensus 89 ~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~ 168 (793)
.+-.+.-.+-.+++|.||+...-.++ .-|+|.|+|.+++ .|+.+...+.. .-+
T Consensus 511 --------------~~~s~~p~~t~~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W~~~k~~~v--~p~- 563 (1160)
T KOG0209|consen 511 --------------TPASKAPNETVLVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGWNLEKKNSV--CPR- 563 (1160)
T ss_pred --------------cchhhCCchHHHHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCcccccCccc--CCC-
Confidence 00011112456899999999875443 3579999999986 67766542211 000
Q ss_pred cCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCC----CcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhcc
Q 003824 169 LDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE----GTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAG 244 (793)
Q Consensus 169 ~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~----~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 244 (793)
++.....+|.+.+.|+|.-|||||++.... -+++..+|||||+|.+++.. .+.++.+...+|+++|
T Consensus 564 ------~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----vP~dY~~iYk~ytR~G 633 (1160)
T KOG0209|consen 564 ------EGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----VPKDYDEIYKRYTRQG 633 (1160)
T ss_pred ------cCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh----CchhHHHHHHHHhhcc
Confidence 011135678899999999999999998742 36899999999999999874 5677888899999999
Q ss_pred ceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEE
Q 003824 245 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 324 (793)
Q Consensus 245 ~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~ 324 (793)
.|||++|||.+.+--. .+.-+..++.+|+||+|.|++.+.-|+|++++++|+.|++++++++
T Consensus 634 sRVLALg~K~l~~~~~------------------~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vv 695 (1160)
T KOG0209|consen 634 SRVLALGYKPLGDMMV------------------SQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVV 695 (1160)
T ss_pred ceEEEEecccccccch------------------hhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEE
Confidence 9999999999874211 1111223578999999999999999999999999999999999999
Q ss_pred EEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhc--cccccC---CCC
Q 003824 325 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL--LDSSNE---SLG 399 (793)
Q Consensus 325 mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~ 399 (793)
|+|||++.||.++|+++|+..+...++.+.++.... +..-.+ ..+... ++.... --.
T Consensus 696 MITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~-~~~w~s-----------------~d~t~~lp~~p~~~~~~l~~ 757 (1160)
T KOG0209|consen 696 MITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGN-QLEWVS-----------------VDGTIVLPLKPGKKKTLLAE 757 (1160)
T ss_pred EEeCCCccchheehheeeeeccCceeeccCccCCCc-eeeEec-----------------CCCceeecCCCCccchhhhh
Confidence 999999999999999999988765555544432111 000000 000000 000000 112
Q ss_pred CeEEEEeCchhhHhhhhh-HHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEE
Q 003824 400 PLALIIDGKSLTYALEDD-VKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVG 478 (793)
Q Consensus 400 ~~~lvi~G~~l~~~~~~~-~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~ 478 (793)
.+.+.++|..++.+...+ +...+. ++-||+|++|+||..++..+|+ .|+.|+|||||.||++|||+|||||+
T Consensus 758 ~~dlcitG~~l~~l~~~~~l~~l~~------hv~VfARvaP~QKE~ii~tlK~-~Gy~TLMCGDGTNDVGALK~AhVGVA 830 (1160)
T KOG0209|consen 758 THDLCITGSALDHLQATDQLRRLIP------HVWVFARVAPKQKEFIITTLKK-LGYVTLMCGDGTNDVGALKQAHVGVA 830 (1160)
T ss_pred hhhhhcchhHHHHHhhhHHHHHhhh------heeEEEeeChhhHHHHHHHHHh-cCeEEEEecCCCcchhhhhhccccee
Confidence 456899999999887755 333333 3449999999999999999998 99999999999999999999999998
Q ss_pred eccCCc-c---------------------------------------------------------------------ccc
Q 003824 479 ISGVEG-M---------------------------------------------------------------------QAV 488 (793)
Q Consensus 479 i~g~~~-~---------------------------------------------------------------------~a~ 488 (793)
+-++.. . .|.
T Consensus 831 LL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDAS 910 (1160)
T KOG0209|consen 831 LLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDAS 910 (1160)
T ss_pred hhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccc
Confidence 743211 0 023
Q ss_pred ccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHh-cccCcccchhHHHHHHHHhhcccc
Q 003824 489 MSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYA-SFSGQPVYNDWFLSLYNVFFTSLP 565 (793)
Q Consensus 489 ~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~-~~s~~~~~~~~~~l~~n~~~~~lp 565 (793)
.||.|...- ...+.+. +..||+.....-+ .+|-+++-.+.-.|+... ...|. =|.+.|.+.--++...
T Consensus 911 iAAPFTsK~asv~~v~~I-IrQGRctLVtTlQ-----MfKILALN~LisAYslSvlyldGV-KfgD~QaTisGlLla~-- 981 (1160)
T KOG0209|consen 911 IAAPFTSKLASVSSVTHI-IRQGRCTLVTTLQ-----MFKILALNCLISAYSLSVLYLDGV-KFGDTQATISGLLLAA-- 981 (1160)
T ss_pred cccccccccchHHHHHHH-HHhcchhHHHHHH-----HHHHHHHHHHHHHHHHHHhhhcCc-eecchhHhHHHHHHHH--
Confidence 444444332 3335555 8999998876533 444444443333443221 11232 2677776665554422
Q ss_pred ceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccC---CCceeehhhHH
Q 003824 566 VIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRK---GGEVIGLEILG 642 (793)
Q Consensus 566 ~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~---~g~~~~~~~~~ 642 (793)
.++.+....+-+....+ .|...+||...+...+.+-..|-...+++.-.......-.. --...+.....
T Consensus 982 -cFlfISrskPLetLSke-------RP~~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllN 1053 (1160)
T KOG0209|consen 982 -CFLFISRSKPLETLSKE-------RPLPNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLN 1053 (1160)
T ss_pred -HHhheecCCchhhHhhc-------CCCCCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhh
Confidence 22223222222233333 34467899999988888887777766666544432211000 01112233444
Q ss_pred HHHHHHHHHHHHHHHHHHhcch----hhHHHHHHHHHHHHHHHHHH--HHhccCccccchhHHHHHHHhccChHHHHHHH
Q 003824 643 TTMYTCVVWVVNCQMALSVTYF----TYIQHLFIWGGITFWYIFLL--AYGAMDPYISTTAYKVFIEACAPAPSFWLITL 716 (793)
Q Consensus 643 t~~f~~~v~~~~~~~~l~~~~~----~~~~~~~i~~si~~~~i~~~--i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l 716 (793)
+.+|......+-...+.+..-. +...|..+..+++....+.+ +....|. +.. .|+.+...-.+-..++
T Consensus 1054 t~vyiisl~~QvsTFAVNY~G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~pe-Ln~-----~~~lV~mp~~fk~~ll 1127 (1160)
T KOG0209|consen 1054 TTVYIISLAQQVSTFAVNYQGRPFRESLRENKGLLYGLLGSAGVIIALATGSSPE-LNE-----KFELVDMPQDFKIKLL 1127 (1160)
T ss_pred hHHHHHHHHHHHHHhhhhccCcchhhhhhhccchHHHHHHHHHHHHHHHhccChh-HHh-----heeeecccHHHHHHHH
Confidence 5555543333222222222222 23455555555444333222 2223332 222 3433333334444455
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC
Q 003824 717 LVLMSSLLPYFTYSAIQMRFFP 738 (793)
Q Consensus 717 ~~~~~~ll~~~i~k~~~~~~~p 738 (793)
.+.++-++..+++.-+.+.+|+
T Consensus 1128 ~~l~lD~v~c~~~er~~~f~f~ 1149 (1160)
T KOG0209|consen 1128 AVLVLDFVLCYLVERVLKFFFG 1149 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHcc
Confidence 5555555555555555555555
No 23
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=8.2e-47 Score=430.47 Aligned_cols=357 Identities=20% Similarity=0.264 Sum_probs=278.8
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.++++++|++.++|+||++|+||||||||||+|+|++.+++..+. .
T Consensus 279 r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~--------------------------- 326 (675)
T TIGR01497 279 RVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG-----V--------------------------- 326 (675)
T ss_pred HHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC-----C---------------------------
Confidence 45688999999999999999999999999999999999998763210 0
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
..++++.+.++|+.. +.||.+.|++++|++.|.....
T Consensus 327 ------------------------~~~~ll~~aa~~~~~--------------s~hP~a~Aiv~~a~~~~~~~~~----- 363 (675)
T TIGR01497 327 ------------------------DEKTLADAAQLASLA--------------DDTPEGKSIVILAKQLGIREDD----- 363 (675)
T ss_pred ------------------------cHHHHHHHHHHhcCC--------------CCCcHHHHHHHHHHHcCCCccc-----
Confidence 013456677777543 2589999999999987753221
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhc
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADA 243 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (793)
..++.....||++.+|+|++.+. +| ..++|||++.+++.|...+...++++.+.+++++++
T Consensus 364 ---------------~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~ 424 (675)
T TIGR01497 364 ---------------VQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQ 424 (675)
T ss_pred ---------------cccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhC
Confidence 12234567899999888877554 34 579999999999988765444556778888999999
Q ss_pred cceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeE
Q 003824 244 GLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKL 323 (793)
Q Consensus 244 G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv 323 (793)
|+|++++|+ |.+++|+++++|++|||++++|++|+++||++
T Consensus 425 G~r~l~va~---------------------------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v 465 (675)
T TIGR01497 425 GGTPLVVCE---------------------------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKT 465 (675)
T ss_pred CCeEEEEEE---------------------------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEE
Confidence 999999993 45899999999999999999999999999999
Q ss_pred EEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEE
Q 003824 324 WVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 403 (793)
Q Consensus 324 ~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 403 (793)
+|+|||+..||..+|+++|+..
T Consensus 466 ~miTGD~~~ta~~iA~~lGI~~---------------------------------------------------------- 487 (675)
T TIGR01497 466 IMITGDNRLTAAAIAAEAGVDD---------------------------------------------------------- 487 (675)
T ss_pred EEEcCCCHHHHHHHHHHcCCCE----------------------------------------------------------
Confidence 9999999999999999999731
Q ss_pred EEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCC
Q 003824 404 IIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 483 (793)
Q Consensus 404 vi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~ 483 (793)
+++|++|++|..+|+.+|+ .|+.|+|+|||.||+|||++|||||+|++.
T Consensus 488 -----------------------------v~a~~~PedK~~~v~~lq~-~g~~VamvGDG~NDapAL~~AdvGiAm~~g- 536 (675)
T TIGR01497 488 -----------------------------FIAEATPEDKIALIRQEQA-EGKLVAMTGDGTNDAPALAQADVGVAMNSG- 536 (675)
T ss_pred -----------------------------EEcCCCHHHHHHHHHHHHH-cCCeEEEECCCcchHHHHHhCCEeEEeCCC-
Confidence 7899999999999999998 789999999999999999999999999532
Q ss_pred cccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchh----------
Q 003824 484 GMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYND---------- 551 (793)
Q Consensus 484 ~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~---------- 551 (793)
...|+++||+++.+.++ +..+ +.+||..+.....+..|++..+++-.|..+-..|...+.+...+|-
T Consensus 537 t~~akeaadivLldd~~s~Iv~a-v~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (675)
T TIGR01497 537 TQAAKEAANMVDLDSDPTKLIEV-VHIGKQLLITRGALTTFSIANDVAKYFAIIPAIFAAAYPQLQALNIMCLHSPDSAI 615 (675)
T ss_pred CHHHHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHheeeecccHHHHHHHHHHHHHhhCcchhhhccccCCChHHHH
Confidence 33389999999998554 7777 8999999999999999999888776665554444433322222221
Q ss_pred HHHHHHHHhh--ccccceeeecccCCCChHHhhh
Q 003824 552 WFLSLYNVFF--TSLPVIALGVFDQDVSARFCLK 583 (793)
Q Consensus 552 ~~~l~~n~~~--~~lp~l~l~~~~~~~~~~~~~~ 583 (793)
..-+.||-+. ..+|.-.-|+-.++.+...+++
T Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (675)
T TIGR01497 616 LSALIFNALIIPALIPLALKGVSYRPLTASALLR 649 (675)
T ss_pred HHHHHHHHHHHHHhHHHHhcCcccccCCHHHHHh
Confidence 1124456544 2345555566666666555443
No 24
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.1e-41 Score=388.68 Aligned_cols=272 Identities=37% Similarity=0.512 Sum_probs=234.2
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
..++++++|+++++|+||++++||||||||||+|+|+|.++++.+.
T Consensus 211 ~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~---------------------------------- 256 (499)
T TIGR01494 211 LAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG---------------------------------- 256 (499)
T ss_pred HHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC----------------------------------
Confidence 3467999999999999999999999999999999999999865421
Q ss_pred cCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCcee
Q 003824 85 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSI 164 (793)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~ 164 (793)
++.++||+|.|++++++..+
T Consensus 257 -------------------------------------------------~~~s~hp~~~ai~~~~~~~~----------- 276 (499)
T TIGR01494 257 -------------------------------------------------EYLSGHPDERALVKSAKWKI----------- 276 (499)
T ss_pred -------------------------------------------------CcCCCChHHHHHHHHhhhcC-----------
Confidence 01246999999999986411
Q ss_pred EEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhcc
Q 003824 165 SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAG 244 (793)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 244 (793)
+...||++.+|+|+++++.+++ .|+||+++.+.+.|.. +.+.+++++.+|
T Consensus 277 -------------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~~~g 326 (499)
T TIGR01494 277 -------------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELAQSG 326 (499)
T ss_pred -------------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHHhCC
Confidence 1356999999999999997444 4789999999988752 233455678899
Q ss_pred ceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEE
Q 003824 245 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 324 (793)
Q Consensus 245 ~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~ 324 (793)
+|++++|++ -+++|+++++|++|++++++|+.|+++|+++|
T Consensus 327 ~~~~~~a~~---------------------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~ 367 (499)
T TIGR01494 327 LRVLAVASK---------------------------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVI 367 (499)
T ss_pred CEEEEEEEC---------------------------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEE
Confidence 999999953 26899999999999999999999999999999
Q ss_pred EEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEE
Q 003824 325 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALI 404 (793)
Q Consensus 325 mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 404 (793)
|+|||+..+|..+|+++|+
T Consensus 368 ~ltGD~~~~a~~ia~~lgi------------------------------------------------------------- 386 (499)
T TIGR01494 368 MLTGDNVLTAKAIAKELGI------------------------------------------------------------- 386 (499)
T ss_pred EEcCCCHHHHHHHHHHcCc-------------------------------------------------------------
Confidence 9999999999999998873
Q ss_pred EeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCCc
Q 003824 405 IDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEG 484 (793)
Q Consensus 405 i~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~ 484 (793)
+++++|++|..+|+.+|+ .|+.|+|+|||.||++|+++|||||+|.
T Consensus 387 -----------------------------~~~~~p~~K~~~v~~l~~-~g~~v~~vGDg~nD~~al~~Advgia~~---- 432 (499)
T TIGR01494 387 -----------------------------FARVTPEEKAALVEALQK-KGRVVAMTGDGVNDAPALKKADVGIAMG---- 432 (499)
T ss_pred -----------------------------eeccCHHHHHHHHHHHHH-CCCEEEEECCChhhHHHHHhCCCccccc----
Confidence 477899999999999998 7899999999999999999999999994
Q ss_pred ccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHH
Q 003824 485 MQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFF 537 (793)
Q Consensus 485 ~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 537 (793)
|+++||+++.+++. +..+ +.+||..+.++++.+.|.+++|+..+.+.+++
T Consensus 433 --a~~~adivl~~~~l~~i~~~-~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~ 484 (499)
T TIGR01494 433 --AKAAADIVLLDDNLSTIVDA-LKEGRKTFSTIKSNIFWAIAYNLILIPLAALL 484 (499)
T ss_pred --hHHhCCeEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999998544 5555 89999999999999999999999977766653
No 25
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-42 Score=366.32 Aligned_cols=470 Identities=18% Similarity=0.231 Sum_probs=318.7
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEE----EEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhh
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIK----CSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQ 79 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (793)
.-+++++++++++++|+|+.+|++|||||||||.|++.+.+ +++.|..
T Consensus 307 rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~---------------------------- 358 (942)
T KOG0205|consen 307 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVD---------------------------- 358 (942)
T ss_pred HHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCC----------------------------
Confidence 44678999999999999999999999999999999999876 2222211
Q ss_pred hcccccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEee
Q 003824 80 EDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYER 159 (793)
Q Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r 159 (793)
-.++++..|+.. ..+ +.+..|.|+|...++-
T Consensus 359 -----------------------------~D~~~L~A~rAs--r~e-----------n~DAID~A~v~~L~dP------- 389 (942)
T KOG0205|consen 359 -----------------------------KDDVLLTAARAS--RKE-----------NQDAIDAAIVGMLADP------- 389 (942)
T ss_pred -----------------------------hHHHHHHHHHHh--hhc-----------ChhhHHHHHHHhhcCH-------
Confidence 012233333332 111 3578999999875431
Q ss_pred cCceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHH
Q 003824 160 TQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINE 239 (793)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~ 239 (793)
+.....|+.++.+|||+..||-...+.+++|.-+..+||||+-|++.|+... +.+++..+.+++
T Consensus 390 ---------------Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~-~i~~~vh~~id~ 453 (942)
T KOG0205|consen 390 ---------------KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDH-DIPERVHSIIDK 453 (942)
T ss_pred ---------------HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccC-cchHHHHHHHHH
Confidence 1123678999999999999999999999999999999999999999998754 688999999999
Q ss_pred HHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHc
Q 003824 240 YADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQA 319 (793)
Q Consensus 240 ~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~a 319 (793)
|+++|+|.|++|++..++..- +.-.....++|+.-+-||+|.+..++|.+...-
T Consensus 454 ~AeRGlRSLgVArq~v~e~~~--------------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~l 507 (942)
T KOG0205|consen 454 FAERGLRSLAVARQEVPEKTK--------------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNL 507 (942)
T ss_pred HHHhcchhhhhhhhccccccc--------------------------cCCCCCcccccccccCCCCccchHHHHHHHHhc
Confidence 999999999999998876421 111357899999999999999999999999999
Q ss_pred CCeEEEEeCCchhhHHHHHHHcCccccCce---EEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccC
Q 003824 320 GIKLWVLTGDKMETAINIGFACSLLRQGMR---QVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNE 396 (793)
Q Consensus 320 gIkv~mlTGD~~~ta~~ia~~~gi~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (793)
|+.|.|+|||...-+...++.+|+-++-.. .+..+.++
T Consensus 508 Gv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~--------------------------------------- 548 (942)
T KOG0205|consen 508 GVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDG--------------------------------------- 548 (942)
T ss_pred cceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCC---------------------------------------
Confidence 999999999999999999999998654211 00000000
Q ss_pred CCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhccee
Q 003824 397 SLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIG 476 (793)
Q Consensus 397 ~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvG 476 (793)
-+.|.......+ ++--|+.+.|+||..+|+.+|+ .++.+.|+|||+||+|+++.||+|
T Consensus 549 -------~~~~~~v~elie--------------~adgfAgVfpehKy~iV~~Lq~-r~hi~gmtgdgvndapaLKkAdig 606 (942)
T KOG0205|consen 549 -------SMPGSPVDELIE--------------KADGFAGVFPEHKYEIVKILQE-RKHIVGMTGDGVNDAPALKKADIG 606 (942)
T ss_pred -------CCCCCcHHHHhh--------------hccCccccCHHHHHHHHHHHhh-cCceecccCCCcccchhhcccccc
Confidence 011111111111 2237889999999999999999 899999999999999999999999
Q ss_pred EEeccCCcccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHH
Q 003824 477 VGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFL 554 (793)
Q Consensus 477 I~i~g~~~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~ 554 (793)
|++.+.... |..+||+++..-.. +... +..+|.+|+|++.+..|.+.-.+-.++-..+.....-| -|++...
T Consensus 607 iava~atda-ar~asdiVltepglSviI~a-vltSraIfqrmknytiyavsitiriv~gfml~alIw~~----df~pfmv 680 (942)
T KOG0205|consen 607 IAVADATDA-ARSASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEF----DFSPFMV 680 (942)
T ss_pred eeeccchhh-hcccccEEEcCCCchhhHHH-HHHHHHHHHHHhhheeeeehhHHHHHHHHHHHHHHHHh----cCCHHHH
Confidence 999766554 88899999998444 5555 67899999999999888877665443222221111111 1344444
Q ss_pred HHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhH-HHHHHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 003824 555 SLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWT-RILGWALNGVANAAIIFFFCIHAMKQQAFRKGG 633 (793)
Q Consensus 555 l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~-~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~g 633 (793)
+++-+ ++--+....+.... |+ ++...-++.+ .|..-++.|-|++++.-.+++..+....+....
T Consensus 681 liiai-lnd~t~mtis~d~v----------~p----sp~pdswkl~~ifatgvVlgtyma~~tvif~w~~~~t~ff~~~f 745 (942)
T KOG0205|consen 681 LIIAI-LNDGTIMTISKDRV----------KP----SPTPDSWKLKEIFATGVVLGTYMAIMTVIFFWAAYTTDFFPRTF 745 (942)
T ss_pred HHHHH-hcCCceEEEEcccC----------CC----CCCCcccchhhhheeeeEehhHHHHHHHHHhhhhcccccccccc
Confidence 43333 33355555543221 11 1111122222 233444566666666555544443332222111
Q ss_pred cee----ehhhHHHHHHHHHHHHHHHHHH-HHhcchhhHHHHHHHH
Q 003824 634 EVI----GLEILGTTMYTCVVWVVNCQMA-LSVTYFTYIQHLFIWG 674 (793)
Q Consensus 634 ~~~----~~~~~~t~~f~~~v~~~~~~~~-l~~~~~~~~~~~~i~~ 674 (793)
.+. ........+|..+.++.+..++ ..+++|.|...+.+++
T Consensus 746 ~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L 791 (942)
T KOG0205|consen 746 GVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLL 791 (942)
T ss_pred ceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHH
Confidence 111 1122334556666666555543 3455666554444433
No 26
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-37 Score=353.88 Aligned_cols=293 Identities=25% Similarity=0.291 Sum_probs=229.6
Q ss_pred CCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccccc
Q 003824 6 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASI 85 (793)
Q Consensus 6 ~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (793)
.++|+++|+.+++|.|+++|+|+||||||||+|+|.+.++...+. ++
T Consensus 387 A~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~------~e--------------------------- 433 (713)
T COG2217 387 ARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG------DE--------------------------- 433 (713)
T ss_pred HhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC------CH---------------------------
Confidence 468999999999999999999999999999999999998865432 00
Q ss_pred CCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCceeE
Q 003824 86 KGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSIS 165 (793)
Q Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~ 165 (793)
.+++...+. ++..++||...|++++|++.|.....
T Consensus 434 ------------------------~~~L~laAa--------------lE~~S~HPiA~AIv~~a~~~~~~~~~------- 468 (713)
T COG2217 434 ------------------------DELLALAAA--------------LEQHSEHPLAKAIVKAAAERGLPDVE------- 468 (713)
T ss_pred ------------------------HHHHHHHHH--------------HHhcCCChHHHHHHHHHHhcCCCCcc-------
Confidence 122222221 12346899999999999987721111
Q ss_pred EEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhccc
Q 003824 166 VHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGL 245 (793)
Q Consensus 166 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~ 245 (793)
.....+|.+++..+ +| ..+.-|.+..+.+.- .+... .....+.+..+|.
T Consensus 469 --~~~~i~G~Gv~~~v----------------------~g--~~v~vG~~~~~~~~~----~~~~~-~~~~~~~~~~~G~ 517 (713)
T COG2217 469 --DFEEIPGRGVEAEV----------------------DG--ERVLVGNARLLGEEG----IDLPL-LSERIEALESEGK 517 (713)
T ss_pred --ceeeeccCcEEEEE----------------------CC--EEEEEcCHHHHhhcC----CCccc-hhhhHHHHHhcCC
Confidence 01112233332221 34 234447776654321 11111 5567778889999
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEEE
Q 003824 246 RTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWV 325 (793)
Q Consensus 246 r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~m 325 (793)
.++.++ .|-.++|+++++|++|++++++|+.||+.||++.|
T Consensus 518 t~v~va---------------------------------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~m 558 (713)
T COG2217 518 TVVFVA---------------------------------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVM 558 (713)
T ss_pred eEEEEE---------------------------------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEE
Confidence 988888 46689999999999999999999999999999999
Q ss_pred EeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEEE
Q 003824 326 LTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALII 405 (793)
Q Consensus 326 lTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi 405 (793)
+|||+..+|..||+++||..
T Consensus 559 LTGDn~~~A~~iA~~lGId~------------------------------------------------------------ 578 (713)
T COG2217 559 LTGDNRRTAEAIAKELGIDE------------------------------------------------------------ 578 (713)
T ss_pred EcCCCHHHHHHHHHHcChHh------------------------------------------------------------
Confidence 99999999999999999831
Q ss_pred eCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEecc-CCc
Q 003824 406 DGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISG-VEG 484 (793)
Q Consensus 406 ~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g-~~~ 484 (793)
+.+.+.|++|.++|+.+|+ .|++|+|+|||.||+|+|.+|||||+|+. ++.
T Consensus 579 ---------------------------v~AellPedK~~~V~~l~~-~g~~VamVGDGINDAPALA~AdVGiAmG~GtDv 630 (713)
T COG2217 579 ---------------------------VRAELLPEDKAEIVRELQA-EGRKVAMVGDGINDAPALAAADVGIAMGSGTDV 630 (713)
T ss_pred ---------------------------heccCCcHHHHHHHHHHHh-cCCEEEEEeCCchhHHHHhhcCeeEeecCCcHH
Confidence 8899999999999999997 89999999999999999999999999954 444
Q ss_pred ccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHH
Q 003824 485 MQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFF 537 (793)
Q Consensus 485 ~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 537 (793)
|+++||+++.+.+. +..+ +.-+|..+.++++.+.+.|..|.+++.+..+.
T Consensus 631 --A~eaADvvL~~~dL~~v~~a-i~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 631 --AIEAADVVLMRDDLSAVPEA-IDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred --HHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998544 6666 88999999999999999999998877665543
No 27
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=6.4e-35 Score=343.89 Aligned_cols=288 Identities=24% Similarity=0.254 Sum_probs=223.6
Q ss_pred CCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccccc
Q 003824 6 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASI 85 (793)
Q Consensus 6 ~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (793)
.++++++|+.+++|.|+++++||||||||||+|+|++.++...+.. +
T Consensus 418 ar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-----~---------------------------- 464 (741)
T PRK11033 418 ARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI-----S---------------------------- 464 (741)
T ss_pred HHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC-----C----------------------------
Confidence 4789999999999999999999999999999999999987543210 0
Q ss_pred CCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCceeE
Q 003824 86 KGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSIS 165 (793)
Q Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~ 165 (793)
.++++...+.. + ..+.||.+.|+++++++.|..
T Consensus 465 -----------------------~~~~l~~aa~~-----e---------~~s~hPia~Ai~~~a~~~~~~---------- 497 (741)
T PRK11033 465 -----------------------ESELLALAAAV-----E---------QGSTHPLAQAIVREAQVRGLA---------- 497 (741)
T ss_pred -----------------------HHHHHHHHHHH-----h---------cCCCCHHHHHHHHHHHhcCCC----------
Confidence 01222222211 1 124699999999999876532
Q ss_pred EEecCCCCCccceeEeEEeEeeCCCCCCceEEE-EEE-cCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhc
Q 003824 166 VHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV-IVR-SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADA 243 (793)
Q Consensus 166 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsv-iv~-~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (793)
+||.++++.+.- -++ .-+|+.+ .-|+++.+.+ . .+...+.++++..+
T Consensus 498 ---------------------~~~~~~~~~~~g~Gv~~~~~g~~~--~ig~~~~~~~-~-------~~~~~~~~~~~~~~ 546 (741)
T PRK11033 498 ---------------------IPEAESQRALAGSGIEGQVNGERV--LICAPGKLPP-L-------ADAFAGQINELESA 546 (741)
T ss_pred ---------------------CCCCcceEEEeeEEEEEEECCEEE--EEecchhhhh-c-------cHHHHHHHHHHHhC
Confidence 345555555431 121 1134432 3488887654 1 12344566788999
Q ss_pred cceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeE
Q 003824 244 GLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKL 323 (793)
Q Consensus 244 G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv 323 (793)
|+|++++| .|.+++|+++++|++|+|++++|+.|++.|+++
T Consensus 547 g~~~v~va---------------------------------------~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~ 587 (741)
T PRK11033 547 GKTVVLVL---------------------------------------RNDDVLGLIALQDTLRADARQAISELKALGIKG 587 (741)
T ss_pred CCEEEEEE---------------------------------------ECCEEEEEEEEecCCchhHHHHHHHHHHCCCEE
Confidence 99999999 366899999999999999999999999999999
Q ss_pred EEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEE
Q 003824 324 WVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 403 (793)
Q Consensus 324 ~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 403 (793)
+|+|||+..+|..+|+++||.
T Consensus 588 ~llTGd~~~~a~~ia~~lgi~----------------------------------------------------------- 608 (741)
T PRK11033 588 VMLTGDNPRAAAAIAGELGID----------------------------------------------------------- 608 (741)
T ss_pred EEEcCCCHHHHHHHHHHcCCC-----------------------------------------------------------
Confidence 999999999999999999972
Q ss_pred EEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCC
Q 003824 404 IIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 483 (793)
Q Consensus 404 vi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~ 483 (793)
..++..|++|..+|+.+++ . ..|+|+|||.||++||++|||||+|++.
T Consensus 609 -----------------------------~~~~~~p~~K~~~v~~l~~-~-~~v~mvGDgiNDapAl~~A~vgia~g~~- 656 (741)
T PRK11033 609 -----------------------------FRAGLLPEDKVKAVTELNQ-H-APLAMVGDGINDAPAMKAASIGIAMGSG- 656 (741)
T ss_pred -----------------------------eecCCCHHHHHHHHHHHhc-C-CCEEEEECCHHhHHHHHhCCeeEEecCC-
Confidence 3355789999999999986 3 5899999999999999999999999633
Q ss_pred cccccccCCeeecchh--hHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHH
Q 003824 484 GMQAVMSSDIAIAQFR--FLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 535 (793)
Q Consensus 484 ~~~a~~~aD~~i~~f~--~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 535 (793)
...++++||+++.+.+ .+..+ +..||..+.++++.+.|.+..|++++.+.+
T Consensus 657 ~~~a~~~adivl~~~~l~~l~~~-i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 657 TDVALETADAALTHNRLRGLAQM-IELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred CHHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3348899999998744 46666 899999999999999999999987655443
No 28
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-34 Score=320.16 Aligned_cols=301 Identities=22% Similarity=0.256 Sum_probs=228.6
Q ss_pred CCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccccc
Q 003824 6 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASI 85 (793)
Q Consensus 6 ~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (793)
..+|+++|..+.+|.+.+|++|.||||||||+|++.+.++.+-+...
T Consensus 564 A~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~--------------------------------- 610 (951)
T KOG0207|consen 564 ATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI--------------------------------- 610 (951)
T ss_pred hhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc---------------------------------
Confidence 36799999999999999999999999999999999999987654320
Q ss_pred CCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCceeE
Q 003824 86 KGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSIS 165 (793)
Q Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~ 165 (793)
..++++...+.- +-.++||...|++++|++.+ ..++...
T Consensus 611 ----------------------~~~e~l~~v~a~--------------Es~SeHPig~AIv~yak~~~-----~~~~~~~ 649 (951)
T KOG0207|consen 611 ----------------------SLKEALALVAAM--------------ESGSEHPIGKAIVDYAKEKL-----VEPNPEG 649 (951)
T ss_pred ----------------------cHHHHHHHHHHH--------------hcCCcCchHHHHHHHHHhcc-----cccCccc
Confidence 112333222211 12357999999999999876 1111111
Q ss_pred EEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhccc
Q 003824 166 VHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGL 245 (793)
Q Consensus 166 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~ 245 (793)
+......+|.+ +...+.+. +.- .+-|.-+.| .+++....++..+.+++-...|.
T Consensus 650 ~~~~~~~pg~g-----------------~~~~~~~~---~~~--i~iGN~~~~----~r~~~~~~~~i~~~~~~~e~~g~ 703 (951)
T KOG0207|consen 650 VLSFEYFPGEG-----------------IYVTVTVD---GNE--VLIGNKEWM----SRNGCSIPDDILDALTESERKGQ 703 (951)
T ss_pred cceeecccCCC-----------------cccceEEe---eeE--EeechHHHH----HhcCCCCchhHHHhhhhHhhcCc
Confidence 22222222221 11111111 111 223554333 33333345567788888889999
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEEE
Q 003824 246 RTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWV 325 (793)
Q Consensus 246 r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~m 325 (793)
.+.+++ -|-+++|+++++|++|+|+..+|+.||+.||++.|
T Consensus 704 tvv~v~---------------------------------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~m 744 (951)
T KOG0207|consen 704 TVVYVA---------------------------------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVM 744 (951)
T ss_pred eEEEEE---------------------------------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEE
Confidence 999998 57789999999999999999999999999999999
Q ss_pred EeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEEE
Q 003824 326 LTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALII 405 (793)
Q Consensus 326 lTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi 405 (793)
+|||+..||.++|+++|+-
T Consensus 745 LTGDn~~aA~svA~~VGi~------------------------------------------------------------- 763 (951)
T KOG0207|consen 745 LTGDNDAAARSVAQQVGID------------------------------------------------------------- 763 (951)
T ss_pred EcCCCHHHHHHHHHhhCcc-------------------------------------------------------------
Confidence 9999999999999999942
Q ss_pred eCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCCcc
Q 003824 406 DGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGM 485 (793)
Q Consensus 406 ~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~ 485 (793)
.|+|.+.|+||..+|+.+|+ .+..|+|+|||.||+|+|.+|||||+|+...+
T Consensus 764 --------------------------~V~aev~P~~K~~~Ik~lq~-~~~~VaMVGDGINDaPALA~AdVGIaig~gs~- 815 (951)
T KOG0207|consen 764 --------------------------NVYAEVLPEQKAEKIKEIQK-NGGPVAMVGDGINDAPALAQADVGIAIGAGSD- 815 (951)
T ss_pred --------------------------eEEeccCchhhHHHHHHHHh-cCCcEEEEeCCCCccHHHHhhccceeeccccH-
Confidence 19999999999999999998 78999999999999999999999999954432
Q ss_pred cccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHH
Q 003824 486 QAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 535 (793)
Q Consensus 486 ~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 535 (793)
.|.++||+++...+. +... +.-+|....|++..+.|.+.+|++-+.+..
T Consensus 816 vAieaADIVLmrn~L~~v~~a-i~LSrkt~~rIk~N~~~A~~yn~~~IpIAa 866 (951)
T KOG0207|consen 816 VAIEAADIVLMRNDLRDVPFA-IDLSRKTVKRIKLNFVWALIYNLVGIPIAA 866 (951)
T ss_pred HHHhhCCEEEEccchhhhHHH-HHHHHHHHhhHHHHHHHHHHHHHhhhhhhe
Confidence 399999999998644 4444 778999999999999999999987554433
No 29
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.8e-33 Score=324.13 Aligned_cols=299 Identities=23% Similarity=0.287 Sum_probs=225.5
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
..++++++|+++.+|.||++|+||||||||||+|+|++.++...+... .
T Consensus 227 ~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~---~---------------------------- 275 (556)
T TIGR01525 227 AARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS---I---------------------------- 275 (556)
T ss_pred HHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC---c----------------------------
Confidence 457899999999999999999999999999999999999886542110 0
Q ss_pred cCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCcee
Q 003824 85 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSI 164 (793)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~ 164 (793)
...+++..++.+ . ..+.||.+.|+++++++.|..... +.
T Consensus 276 -----------------------~~~~~l~~a~~~---e-----------~~~~hp~~~Ai~~~~~~~~~~~~~--~~-- 314 (556)
T TIGR01525 276 -----------------------SEEELLALAAAL---E-----------QSSSHPLARAIVRYAKKRGLELPK--QE-- 314 (556)
T ss_pred -----------------------cHHHHHHHHHHH---h-----------ccCCChHHHHHHHHHHhcCCCccc--cc--
Confidence 001222222222 1 124699999999999987653211 00
Q ss_pred EEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhcc
Q 003824 165 SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAG 244 (793)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 244 (793)
++ ..+ ..+.+...+ +|. ..+..|+++.+ + . +.....+..+.++.++.+|
T Consensus 315 ---------------~~---~~~----~~~gi~~~~---~g~-~~~~lg~~~~~-~-~---~~~~~~~~~~~~~~~~~~g 363 (556)
T TIGR01525 315 ---------------DV---EEV----PGKGVEATV---DGQ-EEVRIGNPRLL-E-L---AAEPISASPDLLNEGESQG 363 (556)
T ss_pred ---------------Ce---eEe----cCCeEEEEE---CCe-eEEEEecHHHH-h-h---cCCCchhhHHHHHHHhhCC
Confidence 00 000 012222222 121 23344666654 1 1 1111223345677888999
Q ss_pred ceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcC-CeE
Q 003824 245 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAG-IKL 323 (793)
Q Consensus 245 ~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~ag-Ikv 323 (793)
+|++.++ .|.+++|.+.++|+++||++++|+.|+++| +++
T Consensus 364 ~~~~~v~---------------------------------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v 404 (556)
T TIGR01525 364 KTVVFVA---------------------------------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKL 404 (556)
T ss_pred cEEEEEE---------------------------------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeE
Confidence 9999998 466899999999999999999999999999 999
Q ss_pred EEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEE
Q 003824 324 WVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 403 (793)
Q Consensus 324 ~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 403 (793)
+|+|||+..++..+++++|+-.
T Consensus 405 ~ivTgd~~~~a~~i~~~lgi~~---------------------------------------------------------- 426 (556)
T TIGR01525 405 VMLTGDNRSAAEAVAAELGIDE---------------------------------------------------------- 426 (556)
T ss_pred EEEeCCCHHHHHHHHHHhCCCe----------------------------------------------------------
Confidence 9999999999999999999721
Q ss_pred EEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCC
Q 003824 404 IIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 483 (793)
Q Consensus 404 vi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~ 483 (793)
+|+++.|++|..+++.++. .++.|+|+|||.||++|+++||+||++++ .
T Consensus 427 -----------------------------~f~~~~p~~K~~~v~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~-~ 475 (556)
T TIGR01525 427 -----------------------------VHAELLPEDKLAIVKELQE-EGGVVAMVGDGINDAPALAAADVGIAMGA-G 475 (556)
T ss_pred -----------------------------eeccCCHHHHHHHHHHHHH-cCCEEEEEECChhHHHHHhhCCEeEEeCC-C
Confidence 6778899999999999997 77899999999999999999999999963 3
Q ss_pred cccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHH
Q 003824 484 GMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 535 (793)
Q Consensus 484 ~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 535 (793)
...++..||+++.+ +..+..+ +..||..+.++++.+.|.+..|+..+.+.+
T Consensus 476 ~~~~~~~Ad~vi~~~~~~~l~~~-i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 476 SDVAIEAADIVLLNDDLSSLPTA-IDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred CHHHHHhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33477899999995 5558887 899999999999999999999998765554
No 30
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-32 Score=287.81 Aligned_cols=357 Identities=22% Similarity=0.289 Sum_probs=256.7
Q ss_pred cCCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcc
Q 003824 3 YEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDK 82 (793)
Q Consensus 3 ~~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (793)
|+.++-++++++..++|..|.||++..|||||+|-|.=.-.+....+
T Consensus 278 dRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~--------------------------------- 324 (681)
T COG2216 278 DRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVP--------------------------------- 324 (681)
T ss_pred hHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCC---------------------------------
Confidence 66778899999999999999999999999999996543222221111
Q ss_pred cccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCc
Q 003824 83 ASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQT 162 (793)
Q Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~ 162 (793)
....+++..+..+++-. -+.|.-..+|+.|++.|+....+...
T Consensus 325 -----------------------gv~~~~la~aa~lsSl~--------------DeTpEGrSIV~LA~~~~~~~~~~~~~ 367 (681)
T COG2216 325 -----------------------GVSEEELADAAQLASLA--------------DETPEGRSIVELAKKLGIELREDDLQ 367 (681)
T ss_pred -----------------------CCCHHHHHHHHHHhhhc--------------cCCCCcccHHHHHHHhccCCCccccc
Confidence 01123455555555332 24788889999999998655431100
Q ss_pred eeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHh
Q 003824 163 SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYAD 242 (793)
Q Consensus 163 ~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 242 (793)
. .-...||+.+.|...+-.. ++ .-+.|||.+.|.......+...++++....++-++
T Consensus 368 ----------------~---~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~ 424 (681)
T COG2216 368 ----------------S---HAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSR 424 (681)
T ss_pred ----------------c---cceeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHh
Confidence 0 1245799888766665544 33 56789999999999887766788899999999999
Q ss_pred ccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCe
Q 003824 243 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIK 322 (793)
Q Consensus 243 ~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIk 322 (793)
.|-..|+++ .|-.++|++.++|-+++|.+|-+.+||+.|||
T Consensus 425 ~GGTPL~V~---------------------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIk 465 (681)
T COG2216 425 LGGTPLVVV---------------------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIK 465 (681)
T ss_pred cCCCceEEE---------------------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCe
Confidence 999999999 57789999999999999999999999999999
Q ss_pred EEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeE
Q 003824 323 LWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLA 402 (793)
Q Consensus 323 v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (793)
.+|+||||+.||..||.+.|+..
T Consensus 466 TvM~TGDN~~TAa~IA~EAGVDd--------------------------------------------------------- 488 (681)
T COG2216 466 TVMITGDNPLTAAAIAAEAGVDD--------------------------------------------------------- 488 (681)
T ss_pred EEEEeCCCHHHHHHHHHHhCchh---------------------------------------------------------
Confidence 99999999999999999999732
Q ss_pred EEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEec-c
Q 003824 403 LIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGIS-G 481 (793)
Q Consensus 403 lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~-g 481 (793)
..+.++|++|..+|+.-|. .|+.|+|+|||.||+|+|.+||||++|. |
T Consensus 489 ------------------------------fiAeatPEdK~~~I~~eQ~-~grlVAMtGDGTNDAPALAqAdVg~AMNsG 537 (681)
T COG2216 489 ------------------------------FIAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQADVGVAMNSG 537 (681)
T ss_pred ------------------------------hhhcCChHHHHHHHHHHHh-cCcEEEEcCCCCCcchhhhhcchhhhhccc
Confidence 5678999999999999998 8999999999999999999999999993 4
Q ss_pred CCcccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHH---HHHHHHHHHHhcccC------cccch
Q 003824 482 VEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAF---GFTLFFFEAYASFSG------QPVYN 550 (793)
Q Consensus 482 ~~~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~---~~~~~~~~~~~~~s~------~~~~~ 550 (793)
+.. ||++++.+=.|-+. |... +.-|++..-.-..+..|++...++- +++.+++.++..... .++.+
T Consensus 538 TqA--AkEAaNMVDLDS~PTKliev-V~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~P~l~~lNiM~L~sP~S 614 (681)
T COG2216 538 TQA--AKEAANMVDLDSNPTKLIEV-VEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAYPQLGALNIMHLHSPQS 614 (681)
T ss_pred cHH--HHHhhcccccCCCccceehH-hhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhcccccceeecccCCcHH
Confidence 433 89999999777554 3333 4457766544444445555444332 334444444421111 11112
Q ss_pred h-HHHHHHHHhh--ccccceeeecccCCCChHHhh
Q 003824 551 D-WFLSLYNVFF--TSLPVIALGVFDQDVSARFCL 582 (793)
Q Consensus 551 ~-~~~l~~n~~~--~~lp~l~l~~~~~~~~~~~~~ 582 (793)
. ..-+.||.+. ..+|.-.-|+-.++.+...++
T Consensus 615 AilSAlIfNAlIIv~LIPLAlkGVkyk~~~a~~lL 649 (681)
T COG2216 615 AILSALIFNALIIVALIPLALKGVKYKPLSASALL 649 (681)
T ss_pred HHHHHHHHHHHHHHHhHHHHhcCcccccCCHHHHH
Confidence 2 2234566544 234544555655555554444
No 31
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=1.5e-31 Score=307.17 Aligned_cols=288 Identities=24% Similarity=0.311 Sum_probs=218.2
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
..++++++|+.+.+|.||++++||||||||||+|+|++.++...+.. .
T Consensus 258 aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~-----~--------------------------- 305 (562)
T TIGR01511 258 AAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR-----D--------------------------- 305 (562)
T ss_pred HHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC-----C---------------------------
Confidence 45789999999999999999999999999999999999987542210 0
Q ss_pred cCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCcee
Q 003824 85 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSI 164 (793)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~ 164 (793)
.++++..++. + +..+.||.+.|+++++++.|.....
T Consensus 306 ------------------------~~~~l~~aa~---~-----------e~~s~HPia~Ai~~~~~~~~~~~~~------ 341 (562)
T TIGR01511 306 ------------------------RTELLALAAA---L-----------EAGSEHPLAKAIVSYAKEKGITLVE------ 341 (562)
T ss_pred ------------------------HHHHHHHHHH---H-----------hccCCChHHHHHHHHHHhcCCCcCC------
Confidence 0122222221 1 1124699999999999887653211
Q ss_pred EEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhcc
Q 003824 165 SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAG 244 (793)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 244 (793)
+ ..++. + ..+.+...+ +| ..+..|+++.+.+. +.. +.++..+|
T Consensus 342 -~------------~~~~~---~----~g~Gi~~~~---~g--~~~~iG~~~~~~~~----~~~--------~~~~~~~g 384 (562)
T TIGR01511 342 -V------------SDFKA---I----PGIGVEGTV---EG--TKIQLGNEKLLGEN----AIK--------IDGKAEQG 384 (562)
T ss_pred -C------------CCeEE---E----CCceEEEEE---CC--EEEEEECHHHHHhC----CCC--------CChhhhCC
Confidence 0 01110 0 012222222 23 23456888765321 111 11235789
Q ss_pred ceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEE
Q 003824 245 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 324 (793)
Q Consensus 245 ~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~ 324 (793)
.+++.++ .|.+++|.++++|+++|+++++|+.|++.|++++
T Consensus 385 ~~~~~~~---------------------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ 425 (562)
T TIGR01511 385 STSVLVA---------------------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPV 425 (562)
T ss_pred CEEEEEE---------------------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEE
Confidence 9988887 5789999999999999999999999999999999
Q ss_pred EEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEE
Q 003824 325 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALI 404 (793)
Q Consensus 325 mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 404 (793)
|+|||+..++..+++++|+-
T Consensus 426 ilSgd~~~~a~~ia~~lgi~------------------------------------------------------------ 445 (562)
T TIGR01511 426 MLTGDNRKTAKAVAKELGIN------------------------------------------------------------ 445 (562)
T ss_pred EEcCCCHHHHHHHHHHcCCc------------------------------------------------------------
Confidence 99999999999999999871
Q ss_pred EeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCCc
Q 003824 405 IDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEG 484 (793)
Q Consensus 405 i~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~ 484 (793)
++++..|++|..+++.++. .++.|+|+|||.||++|++.||+||+++.. .
T Consensus 446 ----------------------------~~~~~~p~~K~~~v~~l~~-~~~~v~~VGDg~nD~~al~~A~vgia~g~g-~ 495 (562)
T TIGR01511 446 ----------------------------VRAEVLPDDKAALIKELQE-KGRVVAMVGDGINDAPALAQADVGIAIGAG-T 495 (562)
T ss_pred ----------------------------EEccCChHHHHHHHHHHHH-cCCEEEEEeCCCccHHHHhhCCEEEEeCCc-C
Confidence 4566789999999999998 788999999999999999999999999643 2
Q ss_pred ccccccCCeeec--chhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHH
Q 003824 485 MQAVMSSDIAIA--QFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 535 (793)
Q Consensus 485 ~~a~~~aD~~i~--~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 535 (793)
..++.+||+++. +...+..+ +..||..+.++++.+.+.+..|++.+.+.+
T Consensus 496 ~~a~~~Advvl~~~~l~~l~~~-i~lsr~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 496 DVAIEAADVVLMRNDLNDVATA-IDLSRKTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred HHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347889999997 46668887 899999999999999999999987665444
No 32
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=99.98 E-value=2e-31 Score=305.09 Aligned_cols=279 Identities=21% Similarity=0.257 Sum_probs=214.1
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
..++++++|+++.+|.||+++++|||||||||+|+|++.++...
T Consensus 227 ~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~------------------------------------ 270 (536)
T TIGR01512 227 AARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA------------------------------------ 270 (536)
T ss_pred HHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH------------------------------------
Confidence 46789999999999999999999999999999999999876320
Q ss_pred cCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCcee
Q 003824 85 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSI 164 (793)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~ 164 (793)
+++...+.+ + ..+.||.+.|+++++++.+ .+ +
T Consensus 271 --------------------------~~l~~a~~~-----e---------~~~~hp~~~Ai~~~~~~~~-~~-----~-- 302 (536)
T TIGR01512 271 --------------------------EVLRLAAAA-----E---------QASSHPLARAIVDYARKRE-NV-----E-- 302 (536)
T ss_pred --------------------------HHHHHHHHH-----h---------ccCCCcHHHHHHHHHHhcC-CC-----c--
Confidence 122222211 1 1246999999999998754 00 0
Q ss_pred EEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhcc
Q 003824 165 SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAG 244 (793)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 244 (793)
..+ .+| .+.+...+ +|.. +..|+++.+.+. + ...+..+|
T Consensus 303 ---------------~~~---~~~----g~gi~~~~---~g~~--~~ig~~~~~~~~----~----------~~~~~~~~ 341 (536)
T TIGR01512 303 ---------------SVE---EVP----GEGVRAVV---DGGE--VRIGNPRSLEAA----V----------GARPESAG 341 (536)
T ss_pred ---------------ceE---Eec----CCeEEEEE---CCeE--EEEcCHHHHhhc----C----------CcchhhCC
Confidence 000 011 11222222 2332 234776544221 1 01456678
Q ss_pred ceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCC-eE
Q 003824 245 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGI-KL 323 (793)
Q Consensus 245 ~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agI-kv 323 (793)
.+++.++ .|..++|.+.++|+++|+++++|+.|+++|+ ++
T Consensus 342 ~~~~~v~---------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v 382 (536)
T TIGR01512 342 KTIVHVA---------------------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKV 382 (536)
T ss_pred CeEEEEE---------------------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcE
Confidence 8887766 5789999999999999999999999999999 99
Q ss_pred EEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEE
Q 003824 324 WVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 403 (793)
Q Consensus 324 ~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 403 (793)
+|+|||+..++..+++++|+..
T Consensus 383 ~vvTgd~~~~a~~i~~~lgi~~---------------------------------------------------------- 404 (536)
T TIGR01512 383 VMLTGDRRAVAERVARELGIDE---------------------------------------------------------- 404 (536)
T ss_pred EEEcCCCHHHHHHHHHHcCChh----------------------------------------------------------
Confidence 9999999999999999999721
Q ss_pred EEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCC
Q 003824 404 IIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 483 (793)
Q Consensus 404 vi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~ 483 (793)
++++..|++|..+++.++. .++.|+|+|||.||++|++.||+||+++...
T Consensus 405 -----------------------------~f~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~~~ 454 (536)
T TIGR01512 405 -----------------------------VHAELLPEDKLEIVKELRE-KYGPVAMVGDGINDAPALAAADVGIAMGASG 454 (536)
T ss_pred -----------------------------hhhccCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHHHhCCEEEEeCCCc
Confidence 5677789999999999988 7899999999999999999999999996233
Q ss_pred cccccccCCeee--cchhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHH
Q 003824 484 GMQAVMSSDIAI--AQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF 536 (793)
Q Consensus 484 ~~~a~~~aD~~i--~~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~ 536 (793)
...++.+||+++ .++..+.++ +..||..+.++++.+.|.+..|++.+.+.++
T Consensus 455 ~~~~~~~ad~vl~~~~l~~l~~~-i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 455 SDVAIETADVVLLNDDLSRLPQA-IRLARRTRRIVKQNVVIALGIILLLILLALF 508 (536)
T ss_pred cHHHHHhCCEEEECCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334788999999 457778887 8999999999999999999999876655543
No 33
>PRK10671 copA copper exporting ATPase; Provisional
Probab=99.98 E-value=1.5e-30 Score=313.11 Aligned_cols=294 Identities=21% Similarity=0.235 Sum_probs=223.4
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
..++++++|+.+.+|+||+++++|||||||||+|+|++.++...+.. .+
T Consensus 498 ~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-----~~-------------------------- 546 (834)
T PRK10671 498 AAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV-----DE-------------------------- 546 (834)
T ss_pred HHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC-----CH--------------------------
Confidence 45789999999999999999999999999999999999887532210 00
Q ss_pred cCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCcee
Q 003824 85 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSI 164 (793)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~ 164 (793)
.+.+-.+.+++. .+.||.+.|+++++...+.. .
T Consensus 547 ------------------------~~~l~~a~~~e~---------------~s~hp~a~Ai~~~~~~~~~~--~------ 579 (834)
T PRK10671 547 ------------------------AQALRLAAALEQ---------------GSSHPLARAILDKAGDMTLP--Q------ 579 (834)
T ss_pred ------------------------HHHHHHHHHHhC---------------CCCCHHHHHHHHHHhhCCCC--C------
Confidence 011122233331 14699999999988643210 0
Q ss_pred EEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhcc
Q 003824 165 SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAG 244 (793)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 244 (793)
+ ..++.+. .+.+...+ +|. .+.+|+++.+.+. + ...+.+...++++..+|
T Consensus 580 -~------------~~~~~~~-------g~Gv~~~~---~g~--~~~~G~~~~~~~~----~-~~~~~~~~~~~~~~~~g 629 (834)
T PRK10671 580 -V------------NGFRTLR-------GLGVSGEA---EGH--ALLLGNQALLNEQ----Q-VDTKALEAEITAQASQG 629 (834)
T ss_pred -c------------ccceEec-------ceEEEEEE---CCE--EEEEeCHHHHHHc----C-CChHHHHHHHHHHHhCC
Confidence 0 1111100 01111111 343 3456998876431 1 11244566677888999
Q ss_pred ceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEE
Q 003824 245 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 324 (793)
Q Consensus 245 ~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~ 324 (793)
.+++.+| .|..++|+++++|++||+++++|+.|++.|++++
T Consensus 630 ~~~v~va---------------------------------------~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~ 670 (834)
T PRK10671 630 ATPVLLA---------------------------------------VDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLV 670 (834)
T ss_pred CeEEEEE---------------------------------------ECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEE
Confidence 9999998 3557899999999999999999999999999999
Q ss_pred EEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEE
Q 003824 325 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALI 404 (793)
Q Consensus 325 mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 404 (793)
|+|||+..+|..+++++|+..
T Consensus 671 ~~Tgd~~~~a~~ia~~lgi~~----------------------------------------------------------- 691 (834)
T PRK10671 671 MLTGDNPTTANAIAKEAGIDE----------------------------------------------------------- 691 (834)
T ss_pred EEcCCCHHHHHHHHHHcCCCE-----------------------------------------------------------
Confidence 999999999999999999731
Q ss_pred EeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCCc
Q 003824 405 IDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEG 484 (793)
Q Consensus 405 i~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~ 484 (793)
+++++.|++|..+++.++. .++.|+|+|||.||++|++.||+||+|++. .
T Consensus 692 ----------------------------~~~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~Agvgia~g~g-~ 741 (834)
T PRK10671 692 ----------------------------VIAGVLPDGKAEAIKRLQS-QGRQVAMVGDGINDAPALAQADVGIAMGGG-S 741 (834)
T ss_pred ----------------------------EEeCCCHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHHHhCCeeEEecCC-C
Confidence 6778889999999999997 788999999999999999999999999643 3
Q ss_pred ccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHH
Q 003824 485 MQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 535 (793)
Q Consensus 485 ~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 535 (793)
..++++||+++.+ +..+..+ +..||..+.++++.+.+.+..|++.+.+.+
T Consensus 742 ~~a~~~ad~vl~~~~~~~i~~~-i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 742 DVAIETAAITLMRHSLMGVADA-LAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4488999999986 4447777 899999999999999999999987765443
No 34
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.88 E-value=1.8e-22 Score=205.26 Aligned_cols=97 Identities=33% Similarity=0.532 Sum_probs=90.1
Q ss_pred CceEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHH
Q 003824 292 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSA 371 (793)
Q Consensus 292 ~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 371 (793)
++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..+|..+|+.+||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 78999999999999999999999999999999999999999999999999982
Q ss_pred HHHHHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcC--ChhhH--HHHHH
Q 003824 372 AAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS--SPKQK--ALVTR 447 (793)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~--sP~qK--~~iv~ 447 (793)
+..+++++ +|++| ..+++
T Consensus 168 ----------------------------------------------------------~~~v~a~~~~kP~~k~~~~~i~ 189 (215)
T PF00702_consen 168 ----------------------------------------------------------DSIVFARVIGKPEPKIFLRIIK 189 (215)
T ss_dssp ----------------------------------------------------------SEEEEESHETTTHHHHHHHHHH
T ss_pred ----------------------------------------------------------cccccccccccccchhHHHHHH
Confidence 12489999 99999 99999
Q ss_pred HHHhcCCCeEEEEcCCccChhhhhhcc
Q 003824 448 LVKTKTSSTTLAIGDGANDVGMLQEAD 474 (793)
Q Consensus 448 ~lk~~~~~~vlaiGDG~ND~~ml~~Ad 474 (793)
.++. .+..|+|+|||.||++|+++||
T Consensus 190 ~l~~-~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 190 ELQV-KPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHTC-TGGGEEEEESSGGHHHHHHHSS
T ss_pred HHhc-CCCEEEEEccCHHHHHHHHhCc
Confidence 9985 4559999999999999999997
No 35
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.60 E-value=1.1e-15 Score=131.35 Aligned_cols=90 Identities=33% Similarity=0.554 Sum_probs=70.8
Q ss_pred HhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeEEeEeeCCCCCCceE
Q 003824 117 AICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRM 196 (793)
Q Consensus 117 alc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 196 (793)
+|||++....+++.+..+ ..|+|+|.||++++.+.|..... ...+..|++++.+||||+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~----------------~~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDI----------------KEIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcH----------------HHHHhhcceeEEEccCccccee
Confidence 589999886554333322 46799999999999999654321 1134789999999999999999
Q ss_pred EEEEEcCCCcEEEEEecCchHhHHHHhh
Q 003824 197 SVIVRSEEGTLLLLSKGADSVMFERLAE 224 (793)
Q Consensus 197 sviv~~~~~~~~l~~KGa~~~i~~~~~~ 224 (793)
+||++ .++.+++|+|||||.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3346788999999999999974
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.52 E-value=6.8e-14 Score=121.67 Aligned_cols=126 Identities=24% Similarity=0.398 Sum_probs=108.8
Q ss_pred ceEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHH
Q 003824 293 LILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAA 372 (793)
Q Consensus 293 l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 372 (793)
....+.++---++-++|+++|+.|++. ++|.+.|||..-+....|.-.|+-..
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 456788888889999999999999999 99999999999999999988886321
Q ss_pred HHHHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc
Q 003824 373 AAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK 452 (793)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~ 452 (793)
.+++-..|+.|+.+++-||+
T Consensus 72 -----------------------------------------------------------rv~a~a~~e~K~~ii~eLkk- 91 (152)
T COG4087 72 -----------------------------------------------------------RVFAGADPEMKAKIIRELKK- 91 (152)
T ss_pred -----------------------------------------------------------eeecccCHHHHHHHHHHhcC-
Confidence 18888999999999999998
Q ss_pred CCCeEEEEcCCccChhhhhhcceeEEeccCCccc--ccccCCeeecchhhHHHHH
Q 003824 453 TSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQ--AVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 453 ~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~--a~~~aD~~i~~f~~l~~ll 505 (793)
+++.|.|+|||+||.+||++||+||..-++++.. +..+||+++.+.+-+..++
T Consensus 92 ~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 92 RYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred CCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 8999999999999999999999999655555532 3488999999988777664
No 37
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.40 E-value=1.1e-12 Score=129.58 Aligned_cols=173 Identities=13% Similarity=0.082 Sum_probs=128.1
Q ss_pred ccchhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 003824 547 PVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQ 626 (793)
Q Consensus 547 ~~~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 626 (793)
.++++.|++|.|++.+.+|+++++.++ ++++.|.++|+ ++++++++++.+..++..|+++++++++.+++....
T Consensus 2 ~Pl~~~qiL~inli~d~~~a~al~~e~--~~~~im~r~Pr----~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~ 75 (182)
T PF00689_consen 2 LPLTPIQILWINLITDLLPALALGFEP--PDPDIMKRPPR----DPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI 75 (182)
T ss_dssp -SS-HHHHHHHHHTTTHHHHHHGGGSS---STTGGGS-------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcCc--chhhhhhcccc----ccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 358999999999999999999999864 44455555555 788999999999999999999999999888776552
Q ss_pred ccccCCCceeehhhHHHHHHHHHHHHHHHHHHHHhcc--------hhhHHHHHHHHHHHHHHHHHHHHhccCccccchhH
Q 003824 627 QAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTY--------FTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAY 698 (793)
Q Consensus 627 ~~~~~~g~~~~~~~~~t~~f~~~v~~~~~~~~l~~~~--------~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~ 698 (793)
.+....+.........|++|+++++.+.+... ..++ ...+.|..+++++++.++++++..++|. ++.
T Consensus 76 ~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~-~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~-~~~--- 150 (182)
T PF00689_consen 76 FGWDEETNNDNLAQAQTMAFTALVLSQLFNAF-NCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPG-LNR--- 150 (182)
T ss_dssp TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHH-HTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTT-HHH---
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHhhhc-ccccccccceecccccccchHHHHHHHHHHHHHHHhcchh-hHh---
Confidence 11111111112456889999999998888765 3333 2345788999999999999999999985 344
Q ss_pred HHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHH
Q 003824 699 KVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAI 732 (793)
Q Consensus 699 ~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~ 732 (793)
+|+..+.++..|+.+++.+++.++.+++.|++
T Consensus 151 --~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 151 --IFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp --HST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred --hhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 67788899999999999999999999999875
No 38
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.98 E-value=9.5e-10 Score=115.96 Aligned_cols=61 Identities=20% Similarity=0.278 Sum_probs=50.4
Q ss_pred cCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 436 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 436 r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
.+.|. .|+.-++.+.++.| +.|++||||.||++||+.|++||+|++.. ..+|.+||++..+
T Consensus 189 eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~-~~vK~~A~~vt~~ 254 (270)
T PRK10513 189 EILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAI-PSVKEVAQFVTKS 254 (270)
T ss_pred EEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCcc-HHHHHhcCeeccC
Confidence 44444 69988888877655 67999999999999999999999996654 4489999999865
No 39
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.92 E-value=1.2e-08 Score=107.08 Aligned_cols=186 Identities=17% Similarity=0.205 Sum_probs=101.4
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc----ccCceEEEEccCCCcccccchhhhHHHHHHHHHH-H
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSETPESKTLEKSEDKSAAAAALKA-S 379 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~ 379 (793)
+.+.+.++|+++++.|+++.++||++...+..+.+++++- ..++..+...++......++.......+...... .
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 8889999999999999999999999999999999999974 3344433333222222222222211111111000 0
Q ss_pred HHHHHhhhhh-ccc------c-ccC-------------CCCC-eEEEEeCchhhHhhhhhHHHHHHHHHhcCC--eeEEE
Q 003824 380 VLHQLIRGKE-LLD------S-SNE-------------SLGP-LALIIDGKSLTYALEDDVKDLFLELAIGCA--SVICC 435 (793)
Q Consensus 380 ~~~~~~~~~~-~~~------~-~~~-------------~~~~-~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~--~vi~~ 435 (793)
.......... ... . ... .... ..+.++- ..+.+.+....+...+. ...+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~ 174 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDK------DHEILEELVEALRKRFPDLGLTVS 174 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEec------ChHhHHHHHHHHhhhccccceEEE
Confidence 0000000000 000 0 000 0000 0001100 00111111111221111 23333
Q ss_pred cCCh-------h--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 436 RSSP-------K--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 436 r~sP-------~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
+..+ . .|+..++.+.++.| ..|+||||+.||.+||+.|+.||+|.+. ...++..||++...
T Consensus 175 ~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na-~~~~k~~A~~vt~~ 247 (264)
T COG0561 175 SSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA-DEELKELADYVTTS 247 (264)
T ss_pred EcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC-CHHHHhhCCcccCC
Confidence 3333 3 69988888887655 4599999999999999999999999776 45589999976554
No 40
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.88 E-value=2.1e-09 Score=113.45 Aligned_cols=199 Identities=17% Similarity=0.114 Sum_probs=105.0
Q ss_pred CceEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc----ccCceEEE-EccCCCcccccchh
Q 003824 292 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVI-ISSETPESKTLEKS 366 (793)
Q Consensus 292 ~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~----~~~~~~~~-i~~~~~~~~~~~~~ 366 (793)
|.||+.- ...+.+.+.++|++|+++|++++++||++...+..+..++++. ..++..+. .++.......+..+
T Consensus 10 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~ 86 (272)
T PRK15126 10 DGTLLMP---DHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPAD 86 (272)
T ss_pred CCcCcCC---CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHH
Confidence 4455531 2348889999999999999999999999999999999998863 23333332 11111111222222
Q ss_pred hhHHHHHHHHHHHH-------------------HHHHhhhhhccccc--c--CCCCCeEEEEeCchhhHhhhhhHHHHHH
Q 003824 367 EDKSAAAAALKASV-------------------LHQLIRGKELLDSS--N--ESLGPLALIIDGKSLTYALEDDVKDLFL 423 (793)
Q Consensus 367 ~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~--~--~~~~~~~lvi~G~~l~~~~~~~~~~~~~ 423 (793)
...+.+........ .............. . .......+.+-+.. + .+ +++...+.
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~-~-~~-~~~~~~l~ 163 (272)
T PRK15126 87 VAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDH-D-DL-TRLQIQLN 163 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCH-H-HH-HHHHHHHH
Confidence 22222211110000 00000000000000 0 00001111111111 0 00 11222221
Q ss_pred HHHh-cCCe----eEEEcCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCe
Q 003824 424 ELAI-GCAS----VICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 493 (793)
Q Consensus 424 ~l~~-~~~~----vi~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~ 493 (793)
.... .... .-+..++|. .|+.-++.+.++.| ..|++||||.||++||+.|+.||+|++.. ..+|.+||+
T Consensus 164 ~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~-~~vK~~A~~ 242 (272)
T PRK15126 164 EALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAM-PQLRAELPH 242 (272)
T ss_pred HHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCCh-HHHHHhCCC
Confidence 1110 0010 113455565 59999998887655 67999999999999999999999996654 448999986
Q ss_pred --eecc
Q 003824 494 --AIAQ 497 (793)
Q Consensus 494 --~i~~ 497 (793)
++.+
T Consensus 243 ~~v~~~ 248 (272)
T PRK15126 243 LPVIGH 248 (272)
T ss_pred CeecCC
Confidence 4443
No 41
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.82 E-value=1.7e-08 Score=103.68 Aligned_cols=182 Identities=16% Similarity=0.158 Sum_probs=98.4
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc----ccCceEEEEccCCCcccccchhhhHHHHHHHHHHHH
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 380 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (793)
+.+.+.++|++|++.|++++++||++...+..+++.+++- ..++..+....................+. ..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~-----~~ 95 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYS-----EL 95 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHH-----HH
Confidence 7789999999999999999999999999999999888863 23333332221111101000011111111 11
Q ss_pred HHHHhhhhhccccccCCCCCeEEE-EeCchhhHhhhhhHHHHHHHHHh---cCCeeEEEcCChh--hHHHHHHHHHhcCC
Q 003824 381 LHQLIRGKELLDSSNESLGPLALI-IDGKSLTYALEDDVKDLFLELAI---GCASVICCRSSPK--QKALVTRLVKTKTS 454 (793)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~lv-i~G~~l~~~~~~~~~~~~~~l~~---~~~~vi~~r~sP~--qK~~iv~~lk~~~~ 454 (793)
..........+...........+. ...... +...+.+..... ......+....|. .|+..++.+.++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~ 170 (230)
T PRK01158 96 KKRFPEASTSLTKLDPDYRKTEVALRRTVPV-----EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMG 170 (230)
T ss_pred HHhccccceeeecCCcccccceeeecccccH-----HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhC
Confidence 011100000010000000001111 111111 112222221110 0011123345554 48888888876544
Q ss_pred ---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 455 ---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 455 ---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
..+++||||.||.+|++.|++||+|.+... .+|..||++..+
T Consensus 171 i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~-~vk~~a~~v~~~ 215 (230)
T PRK01158 171 IDPEEVAAIGDSENDLEMFEVAGFGVAVANADE-ELKEAADYVTEK 215 (230)
T ss_pred CCHHHEEEECCchhhHHHHHhcCceEEecCccH-HHHHhcceEecC
Confidence 579999999999999999999999966554 488999998865
No 42
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.82 E-value=5e-08 Score=97.92 Aligned_cols=112 Identities=22% Similarity=0.251 Sum_probs=85.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
.++.|++.+.++.++++|.+||++||-...-+..+|+.+|+...-...+...+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--------------------------
Confidence 789999999999999999999999999999999999999986543332222210
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC---CeEEE
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLA 459 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~---~~vla 459 (793)
+++|. ++.-.+..+.|...++.+.+..| +.+.|
T Consensus 130 ---------------------~ltG~-----------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a 165 (212)
T COG0560 130 ---------------------KLTGR-----------------------VVGPICDGEGKAKALRELAAELGIPLEETVA 165 (212)
T ss_pred ---------------------EEece-----------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEE
Confidence 22332 23344555778877765555445 46999
Q ss_pred EcCCccChhhhhhcceeEEeccCCc
Q 003824 460 IGDGANDVGMLQEADIGVGISGVEG 484 (793)
Q Consensus 460 iGDG~ND~~ml~~AdvGI~i~g~~~ 484 (793)
+|||.||.|||+.|+.+|++.....
T Consensus 166 ~gDs~nDlpml~~ag~~ia~n~~~~ 190 (212)
T COG0560 166 YGDSANDLPMLEAAGLPIAVNPKPK 190 (212)
T ss_pred EcCchhhHHHHHhCCCCeEeCcCHH
Confidence 9999999999999999999976654
No 43
>PRK10976 putative hydrolase; Provisional
Probab=98.79 E-value=5.4e-09 Score=109.92 Aligned_cols=63 Identities=24% Similarity=0.256 Sum_probs=49.7
Q ss_pred EEcCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCC--eeecc
Q 003824 434 CCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD--IAIAQ 497 (793)
Q Consensus 434 ~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD--~~i~~ 497 (793)
+..+.|. .|+.-++.+.++.| ..|++||||.||++||+.|+.||+|++... .+|..|| +++.+
T Consensus 181 ~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~-~vK~~A~~~~v~~~ 250 (266)
T PRK10976 181 CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQ-RLKDLLPELEVIGS 250 (266)
T ss_pred eEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcH-HHHHhCCCCeeccc
Confidence 3455554 59999988877655 679999999999999999999999966544 4888887 56554
No 44
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.74 E-value=5e-08 Score=97.45 Aligned_cols=126 Identities=19% Similarity=0.147 Sum_probs=90.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.|++.+.|+.+++.| ++.++||-....+..+++.+|+..--...+.+++..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 57999999999999975 999999999999999999999842111101111000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
.++|. .. ..+..|..+++.+++ .+..+.++|||
T Consensus 121 --------------------~~tG~------------------------~~--~~~~~K~~~l~~l~~-~~~~~v~vGDs 153 (203)
T TIGR02137 121 --------------------RVVGY------------------------QL--RQKDPKRQSVIAFKS-LYYRVIAAGDS 153 (203)
T ss_pred --------------------eeECe------------------------ee--cCcchHHHHHHHHHh-hCCCEEEEeCC
Confidence 11221 11 346789999999976 67789999999
Q ss_pred ccChhhhhhcceeEEeccCCcccccccCCeeecc-hhhHHHH
Q 003824 464 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ-FRFLERL 504 (793)
Q Consensus 464 ~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~-f~~l~~l 504 (793)
.||.+|++.|++||++..++.. ...+-|+.... +..+...
T Consensus 154 ~nDl~ml~~Ag~~ia~~ak~~~-~~~~~~~~~~~~~~~~~~~ 194 (203)
T TIGR02137 154 YNDTTMLSEAHAGILFHAPENV-IREFPQFPAVHTYEDLKRE 194 (203)
T ss_pred HHHHHHHHhCCCCEEecCCHHH-HHhCCCCCcccCHHHHHHH
Confidence 9999999999999999887764 34444665443 5555555
No 45
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.74 E-value=3.9e-08 Score=104.99 Aligned_cols=129 Identities=23% Similarity=0.229 Sum_probs=90.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.||+.+.|+.|++.|+++.++||.....+..+...+|+...-...+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 58999999999999999999999999988888888888873211111111000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC---CeEEEE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAI 460 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~---~~vlai 460 (793)
.++|... ..-+..+.|..+++.+.++.| ..|+||
T Consensus 234 --------------------~ltg~v~-----------------------g~iv~~k~K~~~L~~la~~lgi~~~qtIaV 270 (322)
T PRK11133 234 --------------------KLTGNVL-----------------------GDIVDAQYKADTLTRLAQEYEIPLAQTVAI 270 (322)
T ss_pred --------------------EEEeEec-----------------------CccCCcccHHHHHHHHHHHcCCChhhEEEE
Confidence 1111100 001234678888888776544 689999
Q ss_pred cCCccChhhhhhcceeEEeccCCcccccccCCeeecchhhHHHHH
Q 003824 461 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 461 GDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~l~~ll 505 (793)
|||.||.+|++.|++||++...+ ..+..||.++. +..|..+|
T Consensus 271 GDg~NDl~m~~~AGlgiA~nAkp--~Vk~~Ad~~i~-~~~l~~~l 312 (322)
T PRK11133 271 GDGANDLPMIKAAGLGIAYHAKP--KVNEQAQVTIR-HADLMGVL 312 (322)
T ss_pred ECCHHHHHHHHHCCCeEEeCCCH--HHHhhCCEEec-CcCHHHHH
Confidence 99999999999999999994443 37889999996 44454443
No 46
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.73 E-value=2.8e-08 Score=101.73 Aligned_cols=179 Identities=17% Similarity=0.202 Sum_probs=96.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc----cccCceEEEEccCCCc--ccccchhhhHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVIISSETPE--SKTLEKSEDKSAAAAALK 377 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi----~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~ 377 (793)
.+.+.+.++|++|+++||+++++||++...+..+++.+|+ +..++..+........ ...+...........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~--- 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA--- 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh---
Confidence 3778889999999999999999999999999999999884 2222222222111000 000111000000000
Q ss_pred HHHHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcC---CeeEEEcCCh--hhHHHHHHHHHhc
Q 003824 378 ASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGC---ASVICCRSSP--KQKALVTRLVKTK 452 (793)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~---~~vi~~r~sP--~qK~~iv~~lk~~ 452 (793)
.......+............+......+ ........+.... ....+....| ..|+..++.+.++
T Consensus 92 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~ 160 (225)
T TIGR01482 92 ------KTFPFSRLKVQYPRRASLVKMRYGIDVD-----TVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEK 160 (225)
T ss_pred ------cccchhhhccccccccceEEEeecCCHH-----HHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHH
Confidence 0000000000000001111111111111 1111111111100 0112334444 3788888887665
Q ss_pred CC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 453 TS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 453 ~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
.+ ..+++|||+.||++|++.|++|++|.+... .++..||++..+
T Consensus 161 ~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~-~~k~~A~~vt~~ 207 (225)
T TIGR01482 161 LGIKPGETLVCGDSENDIDLFEVPGFGVAVANAQP-ELKEWADYVTES 207 (225)
T ss_pred hCCCHHHEEEECCCHhhHHHHHhcCceEEcCChhH-HHHHhcCeecCC
Confidence 44 679999999999999999999999976544 488999998764
No 47
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.72 E-value=5.7e-08 Score=98.66 Aligned_cols=178 Identities=17% Similarity=0.228 Sum_probs=98.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc----ccCceEEEEccCCCcccccchhhhHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSETPESKTLEKSEDKSAAAAALKAS 379 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (793)
++.+++.++|++|+++|++++++||++...+..+++.+++- ..++..+...... ................ .
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~---~~~~~~~~~~~~~~~~-~- 92 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKED---IFLANMEEEWFLDEEK-K- 92 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCc---EEEecccchhhHHHhh-h-
Confidence 38889999999999999999999999999999999988763 2233333322211 1111100000000000 0
Q ss_pred HHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhc-CCeeEEEcCCh--hhHHHHHHHHHhcCC--
Q 003824 380 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG-CASVICCRSSP--KQKALVTRLVKTKTS-- 454 (793)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~-~~~vi~~r~sP--~qK~~iv~~lk~~~~-- 454 (793)
..... ...... .......+..+++... .+...+...... .....+..++| ..|+..++.+.+..+
T Consensus 93 --~~~~~--~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~ 162 (215)
T TIGR01487 93 --KRFPR--DRLSNE-YPRASLVIMREGKDVD-----EVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIK 162 (215)
T ss_pred --hhhhh--hhcccc-cceeEEEEecCCccHH-----HHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCC
Confidence 00000 000000 0011112222222221 111111111000 00001223333 479988888876544
Q ss_pred -CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 455 -STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 455 -~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
..+++|||+.||.+|++.|++|++|.+.. ..++..||++..+
T Consensus 163 ~~~~i~iGDs~ND~~ml~~ag~~vam~na~-~~~k~~A~~v~~~ 205 (215)
T TIGR01487 163 PEEVAAIGDSENDIDLFRVVGFKVAVANAD-DQLKEIADYVTSN 205 (215)
T ss_pred HHHEEEECCCHHHHHHHHhCCCeEEcCCcc-HHHHHhCCEEcCC
Confidence 46999999999999999999999996654 4488999999864
No 48
>PLN02887 hydrolase family protein
Probab=98.71 E-value=3e-08 Score=113.25 Aligned_cols=61 Identities=28% Similarity=0.403 Sum_probs=50.2
Q ss_pred cCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 436 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 436 r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
.+.|. .|+.-++.+.++.| ..|++||||.||++||+.|++||+|.+... .+|.+||++..+
T Consensus 500 EI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~e-eVK~~Ad~VT~s 565 (580)
T PLN02887 500 EIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAE-KTKAVADVIGVS 565 (580)
T ss_pred EEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCH-HHHHhCCEEeCC
Confidence 44444 69988888887655 579999999999999999999999966544 489999998865
No 49
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.71 E-value=1.2e-08 Score=106.06 Aligned_cols=195 Identities=16% Similarity=0.145 Sum_probs=102.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc----ccCceEE-EEccCCCcccccchhhhHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQV-IISSETPESKTLEKSEDKSAAAAALKA 378 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~----~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (793)
.+.+.+.++|+.|+++|+++++.||+....+..+..++++- ..++..+ ...++......++.+.....+......
T Consensus 15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 94 (254)
T PF08282_consen 15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKEH 94 (254)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHHT
T ss_pred eeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhhc
Confidence 46788999999999999999999999999999999988864 2333333 111111111222222222222211111
Q ss_pred HHHHHHhhhhhcccccc-------------------------CCCCCeEEEEeCch-hhHhhhhhHHHHHHHHHh-cCCe
Q 003824 379 SVLHQLIRGKELLDSSN-------------------------ESLGPLALIIDGKS-LTYALEDDVKDLFLELAI-GCAS 431 (793)
Q Consensus 379 ~~~~~~~~~~~~~~~~~-------------------------~~~~~~~lvi~G~~-l~~~~~~~~~~~~~~l~~-~~~~ 431 (793)
.+...+........... ....-..+.+.++. -...+.+++.+.+..... ....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 174 (254)
T PF08282_consen 95 NISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRSS 174 (254)
T ss_dssp TCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred ccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEec
Confidence 10000000000000000 00011111122111 111111222222221100 0000
Q ss_pred eEEEcCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchh
Q 003824 432 VICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 499 (793)
Q Consensus 432 vi~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~ 499 (793)
.-+..++|. .|+..++.+.++.| +.+++|||+.||.+|++.|+.||+|.+.... .+..||++...-+
T Consensus 175 ~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~-~k~~a~~i~~~~~ 246 (254)
T PF08282_consen 175 PYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPE-LKKAADYITPSNN 246 (254)
T ss_dssp TTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HH-HHHHSSEEESSGT
T ss_pred ccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHH-HHHhCCEEecCCC
Confidence 112334443 69988888876544 6899999999999999999999999766544 8999999887643
No 50
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.67 E-value=1.6e-07 Score=98.95 Aligned_cols=186 Identities=13% Similarity=0.123 Sum_probs=97.7
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc-----ccCceEEEEccCCC-------cccccchhhhHHHH
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL-----RQGMRQVIISSETP-------ESKTLEKSEDKSAA 372 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~-----~~~~~~~~i~~~~~-------~~~~~~~~~~~~~~ 372 (793)
+-+.+.++|++|+++||+++++||+....+..+++++|+- ..|+..+....... ....++.+.....+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 4467889999999999999999999999999999998862 23444333221100 01112222222222
Q ss_pred HHHHHH-HHH---------HHHhhh------hhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCee---E
Q 003824 373 AAALKA-SVL---------HQLIRG------KELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV---I 433 (793)
Q Consensus 373 ~~~~~~-~~~---------~~~~~~------~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~v---i 433 (793)
...... ... ...... ...+.. .......+.+.+..- .+ ..+.+.+... .+..+ -
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~-~~~~~~l~~~--~~~~~~~~~ 177 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALAR--LHEASVTLIWRDSDE--RM-AQFTARLAEL--GLQFVQGAR 177 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHh--ccccCceeEecCCHH--HH-HHHHHHHHHC--CCEEEecCe
Confidence 211111 000 000000 000000 000011122222110 00 1122222210 11111 1
Q ss_pred EEcCChh--hHHHHHHHHHhcCC------CeEEEEcCCccChhhhhhcceeEEeccCCc--cc---ccccCCeeecc
Q 003824 434 CCRSSPK--QKALVTRLVKTKTS------STTLAIGDGANDVGMLQEADIGVGISGVEG--MQ---AVMSSDIAIAQ 497 (793)
Q Consensus 434 ~~r~sP~--qK~~iv~~lk~~~~------~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~--~~---a~~~aD~~i~~ 497 (793)
+..+.|. .|+.-++.+.++.| ..|++||||.||++||+.|++||+|.+... .+ .+..+|++...
T Consensus 178 ~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~ 254 (271)
T PRK03669 178 FWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQR 254 (271)
T ss_pred eEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccC
Confidence 3455553 69988888876533 579999999999999999999999974331 11 23467887665
No 51
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.66 E-value=6.2e-08 Score=102.26 Aligned_cols=56 Identities=23% Similarity=0.342 Sum_probs=46.0
Q ss_pred hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 441 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 441 qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
.|+..++.+.++.| +.|++|||+.||++|++.|++||+|++. ....+..||+++.+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna-~~~lk~~Ad~v~~~ 257 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNA-DDAVKARADLVIGD 257 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCc-hHHHHHhCCEEEec
Confidence 58887777665544 5799999999999999999999999654 34478899998865
No 52
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.61 E-value=3.6e-07 Score=95.46 Aligned_cols=188 Identities=12% Similarity=0.099 Sum_probs=96.8
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc----cccCceEEEEccCCC-------cccccchhhhHHHHH
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVIISSETP-------ESKTLEKSEDKSAAA 373 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi----~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~ 373 (793)
..+.+.++|+.|+++|++++++||+....+..+.+++|+ +..++..+....... ....++.+.....+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 444689999999999999999999999999999999886 444554444322211 111223222222222
Q ss_pred HHHHH-HHHHHH-hh----------h--hhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhc-CCeeEEEcCC
Q 003824 374 AALKA-SVLHQL-IR----------G--KELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG-CASVICCRSS 438 (793)
Q Consensus 374 ~~~~~-~~~~~~-~~----------~--~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~-~~~vi~~r~s 438 (793)
..... +..... .. . ...............++. ..... +.+...+...... ..+..+..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~s~~~~ei~ 171 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW-SEERR----ERFTEALVELGLEVTHGNRFYHVL 171 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec-ChHHH----HHHHHHHHHcCCEEEeCCceEEEe
Confidence 11110 000000 00 0 000000000001111122 11111 1122222211000 0001122333
Q ss_pred hh--hHHHHHHHHHhcC-----CCeEEEEcCCccChhhhhhcceeEEeccCCc--cccccc--C-Ceeecc
Q 003824 439 PK--QKALVTRLVKTKT-----SSTTLAIGDGANDVGMLQEADIGVGISGVEG--MQAVMS--S-DIAIAQ 497 (793)
Q Consensus 439 P~--qK~~iv~~lk~~~-----~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~--~~a~~~--a-D~~i~~ 497 (793)
|. .|+..++.+.++. ...++++||+.||.+|++.|++||+|.+... ...+.. | +++...
T Consensus 172 ~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~ 242 (256)
T TIGR01486 172 GAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPA 242 (256)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCC
Confidence 33 6887777776653 4679999999999999999999999977652 236665 4 476543
No 53
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.53 E-value=1.3e-07 Score=98.85 Aligned_cols=62 Identities=23% Similarity=0.344 Sum_probs=49.9
Q ss_pred EcCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 435 CRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 435 ~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
....|. .|+..++.+.+..+ ..++++||+.||++|++.|+.|++|.+.. ..++..||+++.+
T Consensus 180 leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~-~~~k~~a~~~~~~ 246 (256)
T TIGR00099 180 IEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNAD-EELKALADYVTDS 246 (256)
T ss_pred EEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCch-HHHHHhCCEEecC
Confidence 344554 59999988877544 67999999999999999999999996543 3478899998865
No 54
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.49 E-value=9.2e-06 Score=89.31 Aligned_cols=289 Identities=13% Similarity=0.182 Sum_probs=171.4
Q ss_pred hcCceEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCc-ccccchhhh
Q 003824 290 EKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE-SKTLEKSED 368 (793)
Q Consensus 290 e~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~-~~~~~~~~~ 368 (793)
-++-.|.|++...-+.+.+....|+.|-++-|+.+..+-.+.....-.|.++||-..+..-+.+..+... ..+......
T Consensus 812 ~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~ 891 (1354)
T KOG4383|consen 812 FSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHE 891 (1354)
T ss_pred hccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCCh
Confidence 3678899999999999999999999999999999999999999999999999998877665555443211 111111111
Q ss_pred HHHHHHHHHHHHHHHHhhhhhc---cccccCCCCCeEE-EEeCchhhHhhhh-----------hHHHHHHHHHh-cCCee
Q 003824 369 KSAAAAALKASVLHQLIRGKEL---LDSSNESLGPLAL-IIDGKSLTYALED-----------DVKDLFLELAI-GCASV 432 (793)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l-vi~G~~l~~~~~~-----------~~~~~~~~l~~-~~~~v 432 (793)
.-..++....+.+.|+.....+ +..+........+ -++. ......++ ..+.|+.++.- .-=+-
T Consensus 892 q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~ds-di~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~ 970 (1354)
T KOG4383|consen 892 QFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDS-DIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVG 970 (1354)
T ss_pred hhhccCcchhHHHHHhhhcccccceeehhhcccCCcccccccc-chhhhcCCCchhhcCcchhhcCcccccccCcceeee
Confidence 1111111222222222111100 0000000000000 0000 00000000 11222222110 00123
Q ss_pred EEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccC--hhhhhhcceeEEeccCCccc----------------c-------
Q 003824 433 ICCRSSPKQKALVTRLVKTKTSSTTLAIGDGAND--VGMLQEADIGVGISGVEGMQ----------------A------- 487 (793)
Q Consensus 433 i~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND--~~ml~~AdvGI~i~g~~~~~----------------a------- 487 (793)
.|.+++|+.--++++.+|+ .|++|+..|..+|- ....-+||++|++..-+... |
T Consensus 971 LFTDcnpeamcEMIeIMQE-~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglspl 1049 (1354)
T KOG4383|consen 971 LFTDCNPEAMCEMIEIMQE-NGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPL 1049 (1354)
T ss_pred eccCCCHHHHHHHHHHHHH-cCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCce
Confidence 6889999999999999999 89999999999884 44567899999875532221 0
Q ss_pred -------cccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHHHHH
Q 003824 488 -------VMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYN 558 (793)
Q Consensus 488 -------~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n 558 (793)
..+.|+.+.+-+. +.+| ++..|....-+++.++|.++..+.++.++|+--++. -.++|+--+++|..
T Consensus 1050 QiSgqLnaL~c~~~f~~ee~ikiirL-Ie~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~---LP~i~s~sdii~lS 1125 (1354)
T KOG4383|consen 1050 QISGQLNALACDFRFDHEELIKIIRL-IECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFF---LPIIFSHSDIILLS 1125 (1354)
T ss_pred eecccccccccccchhHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---ccchhccchHHHHH
Confidence 1122332222222 4445 778888889999999999999999888888765553 33457777778877
Q ss_pred Hhhccccceeee-cccCCCChHH-hhhcch
Q 003824 559 VFFTSLPVIALG-VFDQDVSARF-CLKFPL 586 (793)
Q Consensus 559 ~~~~~lp~l~l~-~~~~~~~~~~-~~~~P~ 586 (793)
.+- +|.+.+| ++.+..+... ++..|+
T Consensus 1126 cfc--~PlL~i~tL~gk~~hkSii~maagK 1153 (1354)
T KOG4383|consen 1126 CFC--IPLLFIGTLFGKFEHKSIIIMAAGK 1153 (1354)
T ss_pred HHH--HHHHHHHHHhcCCCccceEEeeccC
Confidence 665 6777777 5554444333 333443
No 55
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.49 E-value=3.8e-07 Score=92.90 Aligned_cols=123 Identities=22% Similarity=0.281 Sum_probs=85.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++++.++.|++.|+++.++||.....+..+...+|+..--...+..++.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 58999999999999999999999999999999999988874311110000000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEc-CChhhHHHHHHHHHhcCC---CeEEE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTKTS---STTLA 459 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r-~sP~qK~~iv~~lk~~~~---~~vla 459 (793)
.++|. +..+ ..+..|..+++.+.+..+ ..+++
T Consensus 138 --------------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~ 173 (219)
T TIGR00338 138 --------------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENTVA 173 (219)
T ss_pred --------------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEE
Confidence 01110 1111 112335666665544333 46899
Q ss_pred EcCCccChhhhhhcceeEEeccCCcccccccCCeeecchh
Q 003824 460 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 499 (793)
Q Consensus 460 iGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~ 499 (793)
|||+.+|+.|.+.|+++|++.+.+. ..++||+++.+.+
T Consensus 174 iGDs~~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~ 211 (219)
T TIGR00338 174 VGDGANDLSMIKAAGLGIAFNAKPK--LQQKADICINKKD 211 (219)
T ss_pred EECCHHHHHHHHhCCCeEEeCCCHH--HHHhchhccCCCC
Confidence 9999999999999999999976654 6789999998754
No 56
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.36 E-value=2.1e-06 Score=81.95 Aligned_cols=96 Identities=16% Similarity=0.213 Sum_probs=71.5
Q ss_pred HHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhcc
Q 003824 312 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 391 (793)
Q Consensus 312 ~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (793)
+|+.|++.|+++.|+||+....+..+.+..|+...
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------------------- 70 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------------------- 70 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------------------------------------------
Confidence 89999999999999999999999999988886320
Q ss_pred ccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc---CCCeEEEEcCCccChh
Q 003824 392 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDVG 468 (793)
Q Consensus 392 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~ND~~ 468 (793)
+++ . ..|...++.+.+. ....++++||+.||++
T Consensus 71 -------------~~~-----------------------------~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~ 106 (154)
T TIGR01670 71 -------------YQG-----------------------------Q--SNKLIAFSDILEKLALAPENVAYIGDDLIDWP 106 (154)
T ss_pred -------------Eec-----------------------------c--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 000 0 1233333333222 2367999999999999
Q ss_pred hhhhcceeEEeccCCcccccccCCeeecc
Q 003824 469 MLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 469 ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
|++.|++++++.+.... .+..||+++..
T Consensus 107 ~~~~ag~~~~v~~~~~~-~~~~a~~i~~~ 134 (154)
T TIGR01670 107 VMEKVGLSVAVADAHPL-LIPRADYVTRI 134 (154)
T ss_pred HHHHCCCeEecCCcCHH-HHHhCCEEecC
Confidence 99999999999665443 67788998864
No 57
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.36 E-value=1.4e-06 Score=84.00 Aligned_cols=100 Identities=14% Similarity=0.199 Sum_probs=72.9
Q ss_pred HHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhc
Q 003824 311 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 390 (793)
Q Consensus 311 ~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (793)
..|+.|+++|+++.|+|+.+...+..+...+|+..- +
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~----f--------------------------------------- 77 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF----H--------------------------------------- 77 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE----E---------------------------------------
Confidence 689999999999999999999999999999987420 0
Q ss_pred cccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhh
Q 003824 391 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 470 (793)
Q Consensus 391 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml 470 (793)
++ + .-.|+--..+++.+.- ....+++|||+.||++|+
T Consensus 78 ---------------~~-------------------------~--kpkp~~~~~~~~~l~~-~~~ev~~iGD~~nDi~~~ 114 (169)
T TIGR02726 78 ---------------EG-------------------------I--KKKTEPYAQMLEEMNI-SDAEVCYVGDDLVDLSMM 114 (169)
T ss_pred ---------------ec-------------------------C--CCCHHHHHHHHHHcCc-CHHHEEEECCCHHHHHHH
Confidence 00 0 0112211222222221 236799999999999999
Q ss_pred hhcceeEEeccCCcccccccCCeeecc
Q 003824 471 QEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 471 ~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
+.|+++++|.+... .++..|+++...
T Consensus 115 ~~ag~~~am~nA~~-~lk~~A~~I~~~ 140 (169)
T TIGR02726 115 KRVGLAVAVGDAVA-DVKEAAAYVTTA 140 (169)
T ss_pred HHCCCeEECcCchH-HHHHhCCEEcCC
Confidence 99999999976654 378999998763
No 58
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.36 E-value=3.5e-06 Score=88.89 Aligned_cols=50 Identities=14% Similarity=0.061 Sum_probs=41.1
Q ss_pred CceEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 292 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 292 ~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
|.||+.- ...+.+++.++|+.|++.|++++++||+....+..+.+++|+.
T Consensus 12 DGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 12 DGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred cccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 4455531 2346677999999999999999999999999999999999874
No 59
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.35 E-value=1.5e-06 Score=88.53 Aligned_cols=52 Identities=8% Similarity=0.089 Sum_probs=42.0
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc----cccCceEEEE
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVII 353 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi----~~~~~~~~~i 353 (793)
.+..-+++.++|++|+++|++++++||+....+..+..++|+ +..|+..+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~ 68 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFI 68 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEe
Confidence 345566799999999999999999999999999999999986 3344444443
No 60
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.34 E-value=9.5e-07 Score=83.26 Aligned_cols=111 Identities=19% Similarity=0.320 Sum_probs=78.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCce--EEEEccCCCcccccchhhhHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMR--QVIISSETPESKTLEKSEDKSAAAAALKASVL 381 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (793)
.+-||++|....|++.|.++.++||--..-+..+|.++||-..+.. .+.++....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk----------------------- 144 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK----------------------- 144 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc-----------------------
Confidence 3679999999999999999999999999999999999999653211 111111000
Q ss_pred HHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc-CCCeEEEE
Q 003824 382 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK-TSSTTLAI 460 (793)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~-~~~~vlai 460 (793)
...++.. -.-+...-|+.+++.+++. +-+.++||
T Consensus 145 ----------------------~~gfd~~-----------------------~ptsdsggKa~~i~~lrk~~~~~~~~mv 179 (227)
T KOG1615|consen 145 ----------------------YLGFDTN-----------------------EPTSDSGGKAEVIALLRKNYNYKTIVMV 179 (227)
T ss_pred ----------------------ccccccC-----------------------CccccCCccHHHHHHHHhCCChheeEEe
Confidence 0000000 0112234689999999874 34789999
Q ss_pred cCCccChhhhhhcceeEEeccC
Q 003824 461 GDGANDVGMLQEADIGVGISGV 482 (793)
Q Consensus 461 GDG~ND~~ml~~AdvGI~i~g~ 482 (793)
|||+||.+|+..||.=||..|.
T Consensus 180 GDGatDlea~~pa~afi~~~g~ 201 (227)
T KOG1615|consen 180 GDGATDLEAMPPADAFIGFGGN 201 (227)
T ss_pred cCCccccccCCchhhhhccCCc
Confidence 9999999999998877766554
No 61
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.28 E-value=2.7e-06 Score=87.68 Aligned_cols=56 Identities=23% Similarity=0.262 Sum_probs=45.4
Q ss_pred cCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCC
Q 003824 436 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD 492 (793)
Q Consensus 436 r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD 492 (793)
...|. .|...++.+.++.+ ..++++||+.||.+|++.|+.||+|.+.... .+..||
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~-~k~~a~ 212 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPE-LEGLRH 212 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHH-HHHhhc
Confidence 34554 79999998877554 4689999999999999999999999765444 788888
No 62
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.24 E-value=6.6e-06 Score=82.76 Aligned_cols=126 Identities=20% Similarity=0.186 Sum_probs=86.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.||++++++.|+++ +++.++||-....+..+...+|+..--...+....+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 3689999999999999 9999999999999999998888742111111111000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
.+.|. . -..|..|...++.++. .+..+++||||
T Consensus 121 --------------------~i~~~------------------------~--~~~p~~k~~~l~~~~~-~~~~~v~iGDs 153 (205)
T PRK13582 121 --------------------MITGY------------------------D--LRQPDGKRQAVKALKS-LGYRVIAAGDS 153 (205)
T ss_pred --------------------eEECc------------------------c--ccccchHHHHHHHHHH-hCCeEEEEeCC
Confidence 01110 0 0136677778887776 67889999999
Q ss_pred ccChhhhhhcceeEEeccCCcccccccCCe-eecchhhHHHH
Q 003824 464 ANDVGMLQEADIGVGISGVEGMQAVMSSDI-AIAQFRFLERL 504 (793)
Q Consensus 464 ~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~-~i~~f~~l~~l 504 (793)
.||++|.++|++|+.....+.. ....+++ ++.++..+..+
T Consensus 154 ~~D~~~~~aa~~~v~~~~~~~~-~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 154 YNDTTMLGEADAGILFRPPANV-IAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred HHHHHHHHhCCCCEEECCCHHH-HHhCCcccccCCHHHHHHH
Confidence 9999999999999987544332 2234554 67777766554
No 63
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.22 E-value=6.1e-06 Score=82.66 Aligned_cols=118 Identities=19% Similarity=0.237 Sum_probs=79.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.++++.|++.|+++.++||-....+..++..+|+..--...+..+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 589999999999999999999999999999999999988632110111111000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcC---CCeEEEE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT---SSTTLAI 460 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~---~~~vlai 460 (793)
...+ . .+....|..|..+++.+.+.. ...+++|
T Consensus 134 --------------------~~~p----------------------~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~i 169 (201)
T TIGR01491 134 --------------------FIQP----------------------D--GIVRVTFDNKGEAVERLKRELNPSLTETVAV 169 (201)
T ss_pred --------------------eEec----------------------c--eeeEEccccHHHHHHHHHHHhCCCHHHEEEE
Confidence 0000 0 111234556776666655433 3569999
Q ss_pred cCCccChhhhhhcceeEEeccCCcccccccCC
Q 003824 461 GDGANDVGMLQEADIGVGISGVEGMQAVMSSD 492 (793)
Q Consensus 461 GDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD 492 (793)
||+.||++|++.|++++++.+... ....++|
T Consensus 170 GDs~~D~~~a~~ag~~~a~~~~~~-~~~~a~~ 200 (201)
T TIGR01491 170 GDSKNDLPMFEVADISISLGDEGH-ADYLAKD 200 (201)
T ss_pred cCCHhHHHHHHhcCCeEEECCCcc-chhhccc
Confidence 999999999999999999854332 2444544
No 64
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.21 E-value=9.5e-06 Score=82.71 Aligned_cols=37 Identities=19% Similarity=0.202 Sum_probs=34.3
Q ss_pred ChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 308 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 308 ~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
.+.++|+.|+++||+++++||+....+..+.+.+++.
T Consensus 20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3889999999999999999999999999999999863
No 65
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.21 E-value=1.4e-05 Score=82.32 Aligned_cols=40 Identities=10% Similarity=0.048 Sum_probs=36.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
..-+.+.++|++|+++||.+++.||+.......+.+++++
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl 57 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRL 57 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCC
Confidence 4556789999999999999999999999999999999997
No 66
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.20 E-value=4.5e-06 Score=82.20 Aligned_cols=111 Identities=18% Similarity=0.189 Sum_probs=78.1
Q ss_pred HHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhc
Q 003824 311 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 390 (793)
Q Consensus 311 ~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (793)
.+|+.|++.|+++.++||+....+..+++.+|+..-
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~-------------------------------------------- 90 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL-------------------------------------------- 90 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee--------------------------------------------
Confidence 689999999999999999999999999999886310
Q ss_pred cccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC---CeEEEEcCCccCh
Q 003824 391 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIGDGANDV 467 (793)
Q Consensus 391 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~---~~vlaiGDG~ND~ 467 (793)
+. ..+.|...++.+.+..| ..|++|||+.||+
T Consensus 91 -------------------------------------------f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~ 125 (183)
T PRK09484 91 -------------------------------------------YQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW 125 (183)
T ss_pred -------------------------------------------ec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 00 01123333333322233 5799999999999
Q ss_pred hhhhhcceeEEeccCCcccccccCCeeec------chhhHHHHH-HHhhhh
Q 003824 468 GMLQEADIGVGISGVEGMQAVMSSDIAIA------QFRFLERLL-LVHGHW 511 (793)
Q Consensus 468 ~ml~~AdvGI~i~g~~~~~a~~~aD~~i~------~f~~l~~ll-l~~GR~ 511 (793)
+|++.|++++++...+ ..++..||+++. ..+.+..++ ...|+|
T Consensus 126 ~~a~~aG~~~~v~~~~-~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~ 175 (183)
T PRK09484 126 PVMEKVGLSVAVADAH-PLLLPRADYVTRIAGGRGAVREVCDLLLLAQGKL 175 (183)
T ss_pred HHHHHCCCeEecCChh-HHHHHhCCEEecCCCCCCHHHHHHHHHHHhcCCh
Confidence 9999999999875433 335678899986 355566553 344554
No 67
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.17 E-value=1.9e-05 Score=90.20 Aligned_cols=49 Identities=8% Similarity=0.049 Sum_probs=39.9
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc----cccCceEEEE
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVII 353 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi----~~~~~~~~~i 353 (793)
.-+.+.++|+.|+++||+++++||+....+..+++++++ +..|+..+..
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~ 486 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFI 486 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEE
Confidence 335679999999999999999999999999999999885 4445554443
No 68
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.16 E-value=1.3e-05 Score=83.37 Aligned_cols=177 Identities=12% Similarity=0.150 Sum_probs=92.6
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcccc------CceEEEEccCCCcccccchhhhHHHHHHH
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ------GMRQVIISSETPESKTLEKSEDKSAAAAA 375 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 375 (793)
..+..+.+.++|+++++.||+++++||+....+..+.++.++..+ ++..+...+.. .........+...
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~-----~~~~~~~~~~~~~ 93 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAE-----VPDQHWAEYLSEK 93 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCC-----cCCHHHHHHHhcc
Confidence 345778899999999999999999999999999999988887543 22222222100 0000001111100
Q ss_pred HHHHHHHHHhhhhhccccc---cCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEE----cCCh--hhHHHHH
Q 003824 376 LKASVLHQLIRGKELLDSS---NESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC----RSSP--KQKALVT 446 (793)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~----r~sP--~qK~~iv 446 (793)
........+......+... .....+..+..+.+.....+ ..+.+.+......+..+... .+.| ..|+..+
T Consensus 94 ~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al 172 (249)
T TIGR01485 94 WQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVI-KQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQAL 172 (249)
T ss_pred cCHHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHH-HHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHH
Confidence 0000001111111111110 01112223322222111111 12222232211122221211 3444 3699888
Q ss_pred HHHHhcCC---CeEEEEcCCccChhhhhh-cceeEEeccCCc
Q 003824 447 RLVKTKTS---STTLAIGDGANDVGMLQE-ADIGVGISGVEG 484 (793)
Q Consensus 447 ~~lk~~~~---~~vlaiGDG~ND~~ml~~-AdvGI~i~g~~~ 484 (793)
+.+.+..+ ..|+++||+.||++|++. ++.||+|.+...
T Consensus 173 ~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~ 214 (249)
T TIGR01485 173 QYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQE 214 (249)
T ss_pred HHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHH
Confidence 88877543 689999999999999998 679999976543
No 69
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.16 E-value=5.8e-05 Score=78.99 Aligned_cols=184 Identities=13% Similarity=0.069 Sum_probs=95.7
Q ss_pred ccCCChHHHHHHHHH-cCCeEEEEeCCchhhHHHHHHHcC--ccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQ-AGIKLWVLTGDKMETAINIGFACS--LLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 380 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~-agIkv~mlTGD~~~ta~~ia~~~g--i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (793)
.+-+++.++|+.|++ .|++++++||+....+..+....+ ++..++..+.-.........+... ..+.+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~---------~~~~i 106 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDA---------IARDI 106 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChh---------HHHHH
Confidence 455788999999998 899999999999999988887665 333333332211111011111111 11111
Q ss_pred HHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCC------eeEEEcCChh--hHHHHHHHHHhc
Q 003824 381 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCA------SVICCRSSPK--QKALVTRLVKTK 452 (793)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~------~vi~~r~sP~--qK~~iv~~lk~~ 452 (793)
...+...........-......++........ -.+.+......+..... ..-+..+.|. .|+..++.+.+.
T Consensus 107 ~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~ 185 (266)
T PRK10187 107 SVQLHTALAQLPGAELEAKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQE 185 (266)
T ss_pred HHHHHHHhccCCCcEEEeCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHh
Confidence 11111100000000000112222332221110 01111112222222221 1122333443 799888876654
Q ss_pred CC---CeEEEEcCCccChhhhhhc----ceeEEeccCCcccccccCCeeecchhhHH
Q 003824 453 TS---STTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDIAIAQFRFLE 502 (793)
Q Consensus 453 ~~---~~vlaiGDG~ND~~ml~~A----dvGI~i~g~~~~~a~~~aD~~i~~f~~l~ 502 (793)
.+ ..++++||+.||.+|++.+ +.||+|++. ...|++.+.+-..+.
T Consensus 186 ~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a-----~~~A~~~l~~~~~v~ 237 (266)
T PRK10187 186 APFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG-----ATQASWRLAGVPDVW 237 (266)
T ss_pred cCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC-----CCcCeEeCCCHHHHH
Confidence 43 6799999999999999999 899999543 346888888755433
No 70
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.13 E-value=8.4e-06 Score=80.96 Aligned_cols=39 Identities=23% Similarity=0.232 Sum_probs=35.8
Q ss_pred CChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccc
Q 003824 307 NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 345 (793)
Q Consensus 307 ~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~ 345 (793)
+++++.|+.++++|++++|+||.....+..+++.+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 666699999999999999999999999999999999854
No 71
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.03 E-value=3e-05 Score=77.91 Aligned_cols=172 Identities=16% Similarity=0.185 Sum_probs=87.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHc--CccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC--SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 381 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~--gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (793)
++.+.+.++|++|++.|++++++||+....+..+.... .++..++..+...+...... ........+... +.+.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~--~~~~~~~~~~~~--~~~~ 92 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIE--PSDVFEEILGIK--EEIG 92 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEc--ccccHHHHHHhh--hhcC
Confidence 46788999999999999999999999999999888763 34555555544322111100 001111111000 0100
Q ss_pred HHHhhhhhccccc--cCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhc-CCeeE------EEcCCh--hhHHHHHHHHH
Q 003824 382 HQLIRGKELLDSS--NESLGPLALIIDGKSLTYALEDDVKDLFLELAIG-CASVI------CCRSSP--KQKALVTRLVK 450 (793)
Q Consensus 382 ~~~~~~~~~~~~~--~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~-~~~vi------~~r~sP--~qK~~iv~~lk 450 (793)
..+.......... ........+...+..........+.......... ....+ +..+.| ..|...++.+.
T Consensus 93 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~ 172 (204)
T TIGR01484 93 AELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALL 172 (204)
T ss_pred ceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHH
Confidence 0000000000000 0011122222222100001111222222221100 01111 223344 47998888887
Q ss_pred hcCC---CeEEEEcCCccChhhhhhcceeEEe
Q 003824 451 TKTS---STTLAIGDGANDVGMLQEADIGVGI 479 (793)
Q Consensus 451 ~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i 479 (793)
++.+ ..++++||+.||.+|++.|++||+|
T Consensus 173 ~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 173 KELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred HHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 6544 5699999999999999999999986
No 72
>PLN02954 phosphoserine phosphatase
Probab=98.01 E-value=3.4e-05 Score=78.76 Aligned_cols=41 Identities=20% Similarity=0.428 Sum_probs=38.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.|+++++++.|++.|+++.++||.....+..++..+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999998884
No 73
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=97.99 E-value=3.5e-05 Score=78.10 Aligned_cols=140 Identities=14% Similarity=0.184 Sum_probs=85.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
-+++||+.+.++.|++.|+++.|+||.....+..+....+... .+. ...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~--~n~-------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIY--CNE-------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEE--ece--------------------------
Confidence 4699999999999999999999999999888888887654321 110 000
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcC
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 462 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 462 (793)
+.++|..+..... . .+. .-+.......|..+++.++. ....+++|||
T Consensus 118 --------------------~~~~~~~~~~~~p-~----------~~~-~~~~~~cg~~K~~~l~~~~~-~~~~~i~iGD 164 (214)
T TIGR03333 118 --------------------ADFSNEYIHIDWP-H----------PCD-GTCQNQCGCCKPSLIRKLSE-PNDYHIVIGD 164 (214)
T ss_pred --------------------eEeeCCeeEEeCC-C----------CCc-cccccCCCCCHHHHHHHHhh-cCCcEEEEeC
Confidence 0111111110000 0 000 00011113579999998876 5677899999
Q ss_pred CccChhhhhhcceeEEeccC-CcccccccCCeeecchhhHHHHHH
Q 003824 463 GANDVGMLQEADIGVGISGV-EGMQAVMSSDIAIAQFRFLERLLL 506 (793)
Q Consensus 463 G~ND~~ml~~AdvGI~i~g~-~~~~a~~~aD~~i~~f~~l~~lll 506 (793)
|.||..|.+.||++++-..- +..+-...+.+.+.+|..+...|-
T Consensus 165 g~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 165 SVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred CHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 99999999999998765311 111112234555666777666643
No 74
>PRK08238 hypothetical protein; Validated
Probab=97.98 E-value=0.00083 Score=75.81 Aligned_cols=40 Identities=20% Similarity=0.156 Sum_probs=37.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
|+++++.+.++.++++|++++++|+-....+..+++..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl 111 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL 111 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999999999987
No 75
>PLN02382 probable sucrose-phosphatase
Probab=97.96 E-value=4.8e-05 Score=84.51 Aligned_cols=174 Identities=13% Similarity=0.087 Sum_probs=89.6
Q ss_pred hHHHH-HHHHHcCCeEEEEeCCchhhHHHHHHHcCccccC------ceEEEEccCCCcccccchhhhHHHHHHHHHHHHH
Q 003824 309 VPECI-DKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG------MRQVIISSETPESKTLEKSEDKSAAAAALKASVL 381 (793)
Q Consensus 309 v~~~I-~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (793)
..+++ +++++.|+.++++||+....+..+.++.++..+. +..+....... ....-...+.........
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~-----~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMV-----PDHGWVEYLNKKWDREIV 107 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCc-----cChhHHHHHhccCChhhH
Confidence 33444 8889999999999999999999999999887654 22222211110 011111111111111111
Q ss_pred HHHhhhhhccc--ccc-CCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCee----EEEcCChh--hHHHHHHHHHhc
Q 003824 382 HQLIRGKELLD--SSN-ESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV----ICCRSSPK--QKALVTRLVKTK 452 (793)
Q Consensus 382 ~~~~~~~~~~~--~~~-~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~v----i~~r~sP~--qK~~iv~~lk~~ 452 (793)
.........+. ... ....+..+..+.+..... .+.+.+.+......++.+ -+..+.|. .|+..++.+.++
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~-~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~ 186 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEV-IKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKK 186 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHH-HHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHH
Confidence 11000000010 100 111222333332222211 122333332211111111 23455555 599999888775
Q ss_pred C---C---CeEEEEcCCccChhhhhhcc-eeEEeccCCcccccc
Q 003824 453 T---S---STTLAIGDGANDVGMLQEAD-IGVGISGVEGMQAVM 489 (793)
Q Consensus 453 ~---~---~~vlaiGDG~ND~~ml~~Ad-vGI~i~g~~~~~a~~ 489 (793)
. | ..|+++||+.||.+||+.|+ .||+|++.... .+.
T Consensus 187 ~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~e-lk~ 229 (413)
T PLN02382 187 LKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEE-LLQ 229 (413)
T ss_pred hhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHH-HHH
Confidence 4 3 58999999999999999999 69999665443 444
No 76
>PTZ00174 phosphomannomutase; Provisional
Probab=97.96 E-value=2.6e-05 Score=80.86 Aligned_cols=48 Identities=25% Similarity=0.390 Sum_probs=38.0
Q ss_pred cCChh--hHHHHHHHHHhcCCCeEEEEcC----CccChhhhhhc-ceeEEeccCCc
Q 003824 436 RSSPK--QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEA-DIGVGISGVEG 484 (793)
Q Consensus 436 r~sP~--qK~~iv~~lk~~~~~~vlaiGD----G~ND~~ml~~A-dvGI~i~g~~~ 484 (793)
.+.|. .|+.-++.+.++ .+.|++||| |.||.+||+.| -.|+++.+.+.
T Consensus 181 eI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~ 235 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPED 235 (247)
T ss_pred EeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHH
Confidence 44443 799999999884 689999999 99999999976 56777765544
No 77
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.88 E-value=4.6e-05 Score=76.43 Aligned_cols=112 Identities=12% Similarity=0.023 Sum_probs=77.0
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHH
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 381 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (793)
..++.+++.+.|+.+++.|++++++||-....+..+++.+|+..--...+....+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g------------------------ 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG------------------------ 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC------------------------
Confidence 45689999999999999999999999999999999999998732100000000000
Q ss_pred HHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC---CeEE
Q 003824 382 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTL 458 (793)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~---~~vl 458 (793)
..+|+.. .-.+.++.|...++.+.+..+ ..++
T Consensus 141 ----------------------~~~g~~~-----------------------~~~~~g~~K~~~l~~~~~~~~~~~~~~~ 175 (202)
T TIGR01490 141 ----------------------IYTGNID-----------------------GNNCKGEGKVHALAELLAEEQIDLKDSY 175 (202)
T ss_pred ----------------------EEeCCcc-----------------------CCCCCChHHHHHHHHHHHHcCCCHHHcE
Confidence 1222211 012345677766665543233 4789
Q ss_pred EEcCCccChhhhhhcceeEEeccC
Q 003824 459 AIGDGANDVGMLQEADIGVGISGV 482 (793)
Q Consensus 459 aiGDG~ND~~ml~~AdvGI~i~g~ 482 (793)
++||+.+|.+|++.|+.++.+...
T Consensus 176 ~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 176 AYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred eeeCCcccHHHHHhCCCcEEeCCC
Confidence 999999999999999999988543
No 78
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.87 E-value=5e-05 Score=74.32 Aligned_cols=40 Identities=20% Similarity=0.165 Sum_probs=37.4
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
+++++.+.++.+++.|++++++||.....+..++...|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 6799999999999999999999999999999999988874
No 79
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.74 E-value=0.00012 Score=72.27 Aligned_cols=42 Identities=14% Similarity=0.078 Sum_probs=38.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 478999999999999999999999999999999888888874
No 80
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.73 E-value=9.2e-05 Score=68.42 Aligned_cols=117 Identities=20% Similarity=0.213 Sum_probs=76.9
Q ss_pred eecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHH
Q 003824 301 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 380 (793)
Q Consensus 301 ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (793)
-..++.+++++.++.|++.|++++++||.....+......+|+......++........ .
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~------------------ 80 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY--Y------------------ 80 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh--c------------------
Confidence 34588999999999999999999999999999999999998873221111110000000 0
Q ss_pred HHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEE
Q 003824 381 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAI 460 (793)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlai 460 (793)
.. ..... ....+++.+-.|..+..+.+.+.. ....++++
T Consensus 81 ------------------~~-~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i 119 (139)
T cd01427 81 ------------------PK-EGLFL---------------------GGGPFDIGKPNPDKLLAALKLLGV-DPEEVLMV 119 (139)
T ss_pred ------------------cc-ccccc---------------------cccccccCCCCHHHHHHHHHHcCC-ChhhEEEe
Confidence 00 00000 112235556667777777777654 46789999
Q ss_pred cCCccChhhhhh-cceeEE
Q 003824 461 GDGANDVGMLQE-ADIGVG 478 (793)
Q Consensus 461 GDG~ND~~ml~~-AdvGI~ 478 (793)
||+.+|+.|.+. ..-+|+
T Consensus 120 gD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 120 GDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCCHHHHHHHHHcCCceee
Confidence 999999999998 444443
No 81
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.68 E-value=0.0002 Score=72.89 Aligned_cols=136 Identities=14% Similarity=0.144 Sum_probs=81.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
+++||+.+.++.|++.|+++.|+||-....+..+.... +.. ..++....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~---------------------------- 122 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGS---------------------------- 122 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEE----------------------------
Confidence 68999999999999999999999999988888888776 422 11110000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEE-cCChhhHHHHHHHHHhcCCCeEEEEcC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC-RSSPKQKALVTRLVKTKTSSTTLAIGD 462 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~-r~sP~qK~~iv~~lk~~~~~~vlaiGD 462 (793)
.++|..+..... + ....-| ......|..+++.++. ....+++|||
T Consensus 123 --------------------~~~~~~~~~~kp-~------------p~~~~~~~~~~~~K~~~l~~~~~-~~~~~i~iGD 168 (219)
T PRK09552 123 --------------------DFSGEYITITWP-H------------PCDEHCQNHCGCCKPSLIRKLSD-TNDFHIVIGD 168 (219)
T ss_pred --------------------EecCCeeEEecc-C------------CccccccccCCCchHHHHHHhcc-CCCCEEEEeC
Confidence 111111100000 0 000000 0001237778887765 5568999999
Q ss_pred CccChhhhhhcceeEEeccC-CcccccccCCeeecchhhHHHH
Q 003824 463 GANDVGMLQEADIGVGISGV-EGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 463 G~ND~~ml~~AdvGI~i~g~-~~~~a~~~aD~~i~~f~~l~~l 504 (793)
|.||+.|.+.||+.++...- +.......+.+.+.+|..+...
T Consensus 169 s~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~ 211 (219)
T PRK09552 169 SITDLEAAKQADKVFARDFLITKCEELGIPYTPFETFHDVQTE 211 (219)
T ss_pred CHHHHHHHHHCCcceeHHHHHHHHHHcCCCccccCCHHHHHHH
Confidence 99999999999997773210 1101123355666667666554
No 82
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.66 E-value=0.00011 Score=67.32 Aligned_cols=110 Identities=15% Similarity=0.226 Sum_probs=78.8
Q ss_pred HHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhc
Q 003824 311 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 390 (793)
Q Consensus 311 ~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (793)
-.|+.|.++||++-++||++...+..=|+++||-.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 57999999999999999999999999999999731
Q ss_pred cccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC---CeEEEEcCCccCh
Q 003824 391 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIGDGANDV 467 (793)
Q Consensus 391 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~---~~vlaiGDG~ND~ 467 (793)
+.-| .++|....+.+.+..+ +.|+.+||-.||.
T Consensus 77 -------------~~qG-------------------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 77 -------------LYQG-------------------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred -------------eeec-------------------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 0111 1334434443333233 6799999999999
Q ss_pred hhhhhcceeEEeccCCcccccccCCeeecc------hhhHHHHHHHhhhh
Q 003824 468 GMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLVHGHW 511 (793)
Q Consensus 468 ~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~------f~~l~~lll~~GR~ 511 (793)
|+|+..+.+++..+.... .++.||+++.. .+....+ +..++.
T Consensus 113 pvm~~vGls~a~~dAh~~-v~~~a~~Vt~~~GG~GAvREv~dl-il~aq~ 160 (170)
T COG1778 113 PVMEKVGLSVAVADAHPL-LKQRADYVTSKKGGEGAVREVCDL-ILQAQG 160 (170)
T ss_pred HHHHHcCCcccccccCHH-HHHhhHhhhhccCcchHHHHHHHH-HHHccC
Confidence 999999999988655443 67889998874 5555555 333333
No 83
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.65 E-value=0.00075 Score=81.14 Aligned_cols=187 Identities=14% Similarity=0.103 Sum_probs=97.0
Q ss_pred cCCChHHHHHHHHH-cCCeEEEEeCCchhhHHHHHHHcC--ccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHH
Q 003824 305 LQNGVPECIDKLAQ-AGIKLWVLTGDKMETAINIGFACS--LLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 381 (793)
Q Consensus 305 lr~~v~~~I~~L~~-agIkv~mlTGD~~~ta~~ia~~~g--i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (793)
+-+++.++|+.|.+ .|+.|+++||+............+ ++..++..+...+..-.........-...+..... ...
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~-~~~ 593 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILE-EFV 593 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHH-HHH
Confidence 56788899999999 699999999999988887765444 45555544432221100000000000111111111 000
Q ss_pred HHHhhhhhccccccCCCCCeEEEEeCch----hhHhhhhhHHHHHHHHHhcCCeeEE-----EcCCh--hhHHHHHHHHH
Q 003824 382 HQLIRGKELLDSSNESLGPLALIIDGKS----LTYALEDDVKDLFLELAIGCASVIC-----CRSSP--KQKALVTRLVK 450 (793)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~----l~~~~~~~~~~~~~~l~~~~~~vi~-----~r~sP--~qK~~iv~~lk 450 (793)
.+. ....+. .....+...-.. +.....+++..++..+.......+. ..+.| -.|+..++.+.
T Consensus 594 ~~~--~gs~ie-----~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll 666 (726)
T PRK14501 594 DRT--PGSFIE-----EKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLL 666 (726)
T ss_pred hcC--CCcEEE-----EcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHH
Confidence 000 000000 111222222111 1111112233333333222111121 23334 37999998887
Q ss_pred hcC-CCeEEEEcCCccChhhhhhc---ceeEEeccCCcccccccCCeeecchhhHHHH
Q 003824 451 TKT-SSTTLAIGDGANDVGMLQEA---DIGVGISGVEGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 451 ~~~-~~~vlaiGDG~ND~~ml~~A---dvGI~i~g~~~~~a~~~aD~~i~~f~~l~~l 504 (793)
+.. ...++++||+.||.+|++.+ ..+|++++ +..+|++.+.+-..+..+
T Consensus 667 ~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-----~~s~A~~~l~~~~eV~~~ 719 (726)
T PRK14501 667 EAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP-----GESRARYRLPSQREVREL 719 (726)
T ss_pred hcCCCCEEEEECCCCChHHHHHhcccCceEEEECC-----CCCcceEeCCCHHHHHHH
Confidence 632 36899999999999999997 46777743 346899999875554443
No 84
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.64 E-value=0.0004 Score=70.86 Aligned_cols=42 Identities=26% Similarity=0.249 Sum_probs=38.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
-++.||+.+.++.|++.|+++.++||.....+..+.+..|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 468899999999999999999999999999888888888873
No 85
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.53 E-value=0.00066 Score=69.06 Aligned_cols=126 Identities=24% Similarity=0.208 Sum_probs=84.4
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHH
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 381 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (793)
+.++-+++++++..|+++|++..++|++....+..+.+..|+...-..++
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~------------------------------ 136 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIV------------------------------ 136 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEE------------------------------
Confidence 55788999999999999999999999999999999999988753211110
Q ss_pred HHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEc
Q 003824 382 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 461 (793)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 461 (793)
.+... -...-.|.....+.+.+.. ..+.++|||
T Consensus 137 ------------------------g~~~~----------------------~~~KP~P~~l~~~~~~~~~-~~~~~l~VG 169 (220)
T COG0546 137 ------------------------GGDDV----------------------PPPKPDPEPLLLLLEKLGL-DPEEALMVG 169 (220)
T ss_pred ------------------------cCCCC----------------------CCCCcCHHHHHHHHHHhCC-ChhheEEEC
Confidence 00000 0011123333334443332 224799999
Q ss_pred CCccChhhhhhcc---eeEEeccC-CcccccccCCeeecchhhHHHH
Q 003824 462 DGANDVGMLQEAD---IGVGISGV-EGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 462 DG~ND~~ml~~Ad---vGI~i~g~-~~~~a~~~aD~~i~~f~~l~~l 504 (793)
|..+|+.|=++|+ |||.-+.. ...-....+|+++.+...|...
T Consensus 170 Ds~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 170 DSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred CCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHH
Confidence 9999999999999 44433222 2222456699999998877655
No 86
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.53 E-value=0.00055 Score=68.82 Aligned_cols=41 Identities=29% Similarity=0.340 Sum_probs=36.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+|+.++++.|+++|+++.++||.....+..+....|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 68899999999999999999999999888888777777763
No 87
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.27 E-value=0.0015 Score=68.74 Aligned_cols=41 Identities=12% Similarity=0.175 Sum_probs=35.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
.++.+++.++++.|++.|+++.++||-....+..+....|+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 46889999999999999999999999988877777766665
No 88
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.26 E-value=0.0014 Score=66.20 Aligned_cols=41 Identities=20% Similarity=0.188 Sum_probs=37.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+|+.++++.|++.|+++.++|+.....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 58899999999999999999999999888888888888874
No 89
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=97.18 E-value=0.0099 Score=61.47 Aligned_cols=66 Identities=11% Similarity=0.097 Sum_probs=48.8
Q ss_pred cCChhhHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhc--------ceeEEeccCCcccccccCCeeecchhhHHHH
Q 003824 436 RSSPKQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEA--------DIGVGISGVEGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 436 r~sP~qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~A--------dvGI~i~g~~~~~a~~~aD~~i~~f~~l~~l 504 (793)
+..+-+|+..++.+.+..+ ..++++||+.||..|++.+ ..||.+. .+. .+..|++++.+...+..+
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~--~g~-~~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG--SGS-KKTVAKFHLTGPQQVLEF 238 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe--cCC-cCCCceEeCCCHHHHHHH
Confidence 3445579988887766433 5799999999999999999 4677664 222 456799999987766555
No 90
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.13 E-value=0.0025 Score=65.20 Aligned_cols=40 Identities=23% Similarity=0.126 Sum_probs=35.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.||+.+.++.|++.|+++.++|+.+...+..+-...|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l 134 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGW 134 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCc
Confidence 5789999999999999999999999988777777666665
No 91
>PLN02423 phosphomannomutase
Probab=97.12 E-value=0.0021 Score=66.39 Aligned_cols=42 Identities=19% Similarity=0.375 Sum_probs=35.3
Q ss_pred hHHHHHHHHHhcCCCeEEEEcC----CccChhhhhh-cceeEEeccCCc
Q 003824 441 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQE-ADIGVGISGVEG 484 (793)
Q Consensus 441 qK~~iv~~lk~~~~~~vlaiGD----G~ND~~ml~~-AdvGI~i~g~~~ 484 (793)
.|+.-++.++ ....|+|+|| |.||.+||+. -=.|+.+++-+.
T Consensus 189 nKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 189 DKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred CHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 6999999998 5788999999 8999999997 556888876543
No 92
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.04 E-value=0.0025 Score=64.44 Aligned_cols=41 Identities=22% Similarity=0.058 Sum_probs=36.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+|+.++++.|+++|+++.++||.....+..+....|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 37899999999999999999999999988888888888764
No 93
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.01 E-value=0.0036 Score=64.77 Aligned_cols=165 Identities=17% Similarity=0.201 Sum_probs=81.2
Q ss_pred HHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccc---c-chhhhHHHHHHHHHHHHHHHHhhhhhcc
Q 003824 316 LAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT---L-EKSEDKSAAAAALKASVLHQLIRGKELL 391 (793)
Q Consensus 316 L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (793)
..+.++.++++||++.+.+..+.++.++..++ .++.+... +... . ....-.+.+..........++-.....+
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd--~~I~svGt-~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l 107 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPD--YIITSVGT-EIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGL 107 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-S--EEEETTTT-EEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCE
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCC--EEEecCCe-EEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCc
Confidence 44788999999999999999999999885432 11111111 1110 0 1111112222111111111111111111
Q ss_pred cc---ccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeE----EEcCCh--hhHHHHHHHHHhcCC---CeEEE
Q 003824 392 DS---SNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVI----CCRSSP--KQKALVTRLVKTKTS---STTLA 459 (793)
Q Consensus 392 ~~---~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi----~~r~sP--~qK~~iv~~lk~~~~---~~vla 459 (793)
.. ......+....++.......+ +++...+......++.+. +..+-| ..|...|+.++++.+ ..|++
T Consensus 108 ~~q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~ 186 (247)
T PF05116_consen 108 RPQPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLV 186 (247)
T ss_dssp EEGGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEE
T ss_pred ccCCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEE
Confidence 11 111233455555554433222 233333332222222110 122333 369999999998643 57889
Q ss_pred EcCCccChhhhhhcceeEEeccCCc
Q 003824 460 IGDGANDVGMLQEADIGVGISGVEG 484 (793)
Q Consensus 460 iGDG~ND~~ml~~AdvGI~i~g~~~ 484 (793)
+||+.||.+||..++-||.+.+...
T Consensus 187 aGDSgND~~mL~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 187 AGDSGNDLEMLEGGDHGVVVGNAQP 211 (247)
T ss_dssp EESSGGGHHHHCCSSEEEE-TTS-H
T ss_pred EeCCCCcHHHHcCcCCEEEEcCCCH
Confidence 9999999999999999998876554
No 94
>PRK11590 hypothetical protein; Provisional
Probab=97.01 E-value=0.011 Score=59.74 Aligned_cols=111 Identities=14% Similarity=0.083 Sum_probs=75.1
Q ss_pred ccCCChHHHH-HHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECI-DKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 304 ~lr~~v~~~I-~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
.+.|++.++| +.+++.|++++++|+-....+..++...|+.. ...++...-+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~-------------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQ-------------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEE--------------------------
Confidence 4589999999 57889999999999999999999999988622 1112111100
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcC
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 462 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 462 (793)
...+|. +....+..+.|..-++..-........+-||
T Consensus 148 --------------------~~~tg~-----------------------~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~D 184 (211)
T PRK11590 148 --------------------RRYGGW-----------------------VLTLRCLGHEKVAQLERKIGTPLRLYSGYSD 184 (211)
T ss_pred --------------------EEEccE-----------------------ECCccCCChHHHHHHHHHhCCCcceEEEecC
Confidence 011121 1122355677876555321113455678999
Q ss_pred CccChhhhhhcceeEEeccCCc
Q 003824 463 GANDVGMLQEADIGVGISGVEG 484 (793)
Q Consensus 463 G~ND~~ml~~AdvGI~i~g~~~ 484 (793)
+.||.|||+.|+-++.+.....
T Consensus 185 s~~D~pmL~~a~~~~~vnp~~~ 206 (211)
T PRK11590 185 SKQDNPLLYFCQHRWRVTPRGE 206 (211)
T ss_pred CcccHHHHHhCCCCEEECccHH
Confidence 9999999999999999966543
No 95
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.00 E-value=0.0047 Score=64.38 Aligned_cols=124 Identities=10% Similarity=0.134 Sum_probs=80.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+|+.++++.|++.|+++.++|+.....+..+-..+|+...-..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~---------------------------------- 154 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSV---------------------------------- 154 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcE----------------------------------
Confidence 5789999999999999999999999999888888888886432111
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
++.+.... ...-.|+-=...++.+.- ....+++|||.
T Consensus 155 --------------------ii~~~d~~----------------------~~KP~Pe~~~~a~~~l~~-~p~~~l~IgDs 191 (260)
T PLN03243 155 --------------------VLAAEDVY----------------------RGKPDPEMFMYAAERLGF-IPERCIVFGNS 191 (260)
T ss_pred --------------------EEecccCC----------------------CCCCCHHHHHHHHHHhCC-ChHHeEEEcCC
Confidence 12111110 001111111122222221 33679999999
Q ss_pred ccChhhhhhcceeE-EeccCCcccccccCCeeecchhhHHHH
Q 003824 464 ANDVGMLQEADIGV-GISGVEGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 464 ~ND~~ml~~AdvGI-~i~g~~~~~a~~~aD~~i~~f~~l~~l 504 (793)
.+|+.+=+.|++-. ++.|.........+|+++.+++.+...
T Consensus 192 ~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 192 NSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred HHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHH
Confidence 99999999999854 565443322334579998888776544
No 96
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.99 E-value=0.0052 Score=64.52 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=37.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.||+.++++.|++.|+++.++|+.....+..+-+..|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999888888874
No 97
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.99 E-value=0.0046 Score=62.27 Aligned_cols=110 Identities=15% Similarity=0.101 Sum_probs=73.7
Q ss_pred ccCCChHHHHH-HHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECID-KLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 304 ~lr~~v~~~I~-~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
.+.|++.++|+ .+++.|++++++|+=....+..+|+..++.... .++...-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57999999996 789899999999999999999999886654321 11111100
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcC
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 462 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 462 (793)
+.+|.. +..-.+..+.|..-++..-........+-||
T Consensus 147 ---------------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsD 183 (210)
T TIGR01545 147 ---------------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGYSD 183 (210)
T ss_pred ---------------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEecC
Confidence 001100 0122345577766554321112345679999
Q ss_pred CccChhhhhhcceeEEeccCC
Q 003824 463 GANDVGMLQEADIGVGISGVE 483 (793)
Q Consensus 463 G~ND~~ml~~AdvGI~i~g~~ 483 (793)
+.||.|||+.||.++.+...+
T Consensus 184 S~~D~pmL~~a~~~~~Vnp~~ 204 (210)
T TIGR01545 184 SKQDNPLLAFCEHRWRVSKRG 204 (210)
T ss_pred CcccHHHHHhCCCcEEECcch
Confidence 999999999999999996544
No 98
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.95 E-value=0.0042 Score=64.39 Aligned_cols=44 Identities=16% Similarity=0.255 Sum_probs=40.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccC
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG 347 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~ 347 (793)
+++||+.+.++.|++.||++.++||-....+..+.++.|+...+
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 57999999999999999999999999999999999999986544
No 99
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.82 E-value=0.0056 Score=62.34 Aligned_cols=42 Identities=17% Similarity=0.173 Sum_probs=37.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
-++-||+.++++.|++.|+++.++||.....+..+.+..|+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 132 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR 132 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch
Confidence 368899999999999999999999999988888888888764
No 100
>PLN02580 trehalose-phosphatase
Probab=96.81 E-value=0.059 Score=58.70 Aligned_cols=68 Identities=15% Similarity=0.157 Sum_probs=48.4
Q ss_pred EcCCh---hhHHHHHHHHHhcCC---C---eEEEEcCCccChhhhhh-----cceeEEeccCCcccccccCCeeecchhh
Q 003824 435 CRSSP---KQKALVTRLVKTKTS---S---TTLAIGDGANDVGMLQE-----ADIGVGISGVEGMQAVMSSDIAIAQFRF 500 (793)
Q Consensus 435 ~r~sP---~qK~~iv~~lk~~~~---~---~vlaiGDG~ND~~ml~~-----AdvGI~i~g~~~~~a~~~aD~~i~~f~~ 500 (793)
..+.| -+|+..|+.+.+..+ . .+++|||+.||..|++. +++||.|++... ...|+|.+.+-..
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~e 368 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPSE 368 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHHH
Confidence 34455 389988888776543 1 25899999999999996 588888864332 2468899988666
Q ss_pred HHHHH
Q 003824 501 LERLL 505 (793)
Q Consensus 501 l~~ll 505 (793)
+..+|
T Consensus 369 V~~~L 373 (384)
T PLN02580 369 VMEFL 373 (384)
T ss_pred HHHHH
Confidence 55553
No 101
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.67 E-value=0.082 Score=64.11 Aligned_cols=202 Identities=10% Similarity=0.074 Sum_probs=99.3
Q ss_pred CceEEEEEeeecccCCChHHHHHHH-HHcCCeEEEEeCCchhhHHHHHHH---cCccccCceEEEEccCCCcccccchhh
Q 003824 292 NLILLGATAVEDKLQNGVPECIDKL-AQAGIKLWVLTGDKMETAINIGFA---CSLLRQGMRQVIISSETPESKTLEKSE 367 (793)
Q Consensus 292 ~l~~lG~~~ieD~lr~~v~~~I~~L-~~agIkv~mlTGD~~~ta~~ia~~---~gi~~~~~~~~~i~~~~~~~~~~~~~~ 367 (793)
|.||+-.....-.+-+++.+++++| ++.|+.|+++||+...+....-.. ++++..++..+...+... ..... .
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~--w~~~~-~ 680 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVE--WETCV-P 680 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCce--eeecc-h
Confidence 4455533222224556888999997 778999999999999998877744 456666655443322211 00000 0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhhH-h---hhhhHHHHHHHHHhcCC-------eeEEEc
Q 003824 368 DKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTY-A---LEDDVKDLFLELAIGCA-------SVICCR 436 (793)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~-~---~~~~~~~~~~~l~~~~~-------~vi~~r 436 (793)
..+.........+....... .....-......++..-...+. . ...++..++........ .++=.+
T Consensus 681 ~~~~~w~~~v~~i~~~y~er---tpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~ 757 (854)
T PLN02205 681 VADCSWKQIAEPVMQLYTET---TDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVK 757 (854)
T ss_pred hhhHHHHHHHHHHHHHHhcC---CCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEE
Confidence 00000010001111111000 0000001123344433322211 0 01133333333222111 112122
Q ss_pred CChhhHHHHHHHHHhc---CC---CeEEEEcCCccChhhhhhcc--------------eeEEeccCCcccccccCCeeec
Q 003824 437 SSPKQKALVTRLVKTK---TS---STTLAIGDGANDVGMLQEAD--------------IGVGISGVEGMQAVMSSDIAIA 496 (793)
Q Consensus 437 ~sP~qK~~iv~~lk~~---~~---~~vlaiGDG~ND~~ml~~Ad--------------vGI~i~g~~~~~a~~~aD~~i~ 496 (793)
..--.|+..++.+.+. .| ..++++||+.||..|++.++ ++|.++.. ...|.+-+.
T Consensus 758 p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~-----~S~A~y~L~ 832 (854)
T PLN02205 758 PQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQK-----PSKAKYYLD 832 (854)
T ss_pred eCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCC-----CccCeEecC
Confidence 2233699888887531 23 47999999999999999886 34444222 246778787
Q ss_pred chhhHHHH
Q 003824 497 QFRFLERL 504 (793)
Q Consensus 497 ~f~~l~~l 504 (793)
+-..+..+
T Consensus 833 d~~eV~~l 840 (854)
T PLN02205 833 DTAEIVRL 840 (854)
T ss_pred CHHHHHHH
Confidence 76665555
No 102
>PRK11587 putative phosphatase; Provisional
Probab=96.59 E-value=0.012 Score=59.66 Aligned_cols=40 Identities=20% Similarity=0.201 Sum_probs=32.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.||+.++++.|+++|+++.++|+.....+...-...|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999876655554444554
No 103
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.53 E-value=0.014 Score=59.28 Aligned_cols=42 Identities=24% Similarity=0.175 Sum_probs=38.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
.++.+|+.+.++.|++.|+++.++||-....+..+....|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999988888888764
No 104
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.47 E-value=0.019 Score=62.48 Aligned_cols=41 Identities=17% Similarity=0.159 Sum_probs=37.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+|+.++++.|+++|+++.++|+.....+..+-...||.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~ 256 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR 256 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH
Confidence 47899999999999999999999999999999888888874
No 105
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.43 E-value=0.016 Score=60.19 Aligned_cols=41 Identities=29% Similarity=0.208 Sum_probs=36.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.||+.++++.|++.|+++.++||.....+..+-+..|+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~ 139 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ 139 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc
Confidence 46799999999999999999999999988888887777764
No 106
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.35 E-value=0.031 Score=58.64 Aligned_cols=40 Identities=28% Similarity=0.158 Sum_probs=34.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++-||+.++|+.|++.|+++.++||.....+..+-...++
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l 140 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAA 140 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhh
Confidence 5679999999999999999999999988877666666554
No 107
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.17 E-value=0.034 Score=53.15 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=31.3
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHH
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI 335 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~ 335 (793)
+|.+.+++.++++.++++|++++++||+....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999988774
No 108
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.15 E-value=0.042 Score=53.66 Aligned_cols=159 Identities=17% Similarity=0.178 Sum_probs=86.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++-||+.++++.|++.=-.+++-|. -..-+..+|..+|+-..+.....++-++... ... .+++....
T Consensus 83 ~lvPgA~etm~~l~~~~tp~v~STS-Y~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~---Pee---------eR~E~L~~ 149 (315)
T COG4030 83 KLVPGAEETMATLQERWTPVVISTS-YTQYLRRTASMIGVPRGELHGTEVDLDSIAV---PEE---------EREELLSI 149 (315)
T ss_pred ccCCChHHHHHHHhccCCceEEecc-HHHHHHHHHHhcCCCccccccccccCccccC---ChH---------HHHHHHHh
Confidence 5779999999999876555555554 4455678888888744332221222111110 000 01111111
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhH----HHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC--CeE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDV----KDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS--STT 457 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~----~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~--~~v 457 (793)
+. ..-.++|+.|-.-+++-+ .....+++...++|- ...|+.+++.+-+..+ ...
T Consensus 150 ~~---------------~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VG-----gg~ka~i~e~~~ele~~d~sa 209 (315)
T COG4030 150 ID---------------VIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVG-----GGEKAKIMEGYCELEGIDFSA 209 (315)
T ss_pred cC---------------ccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhcc-----CcchhHHHHHHHhhcCCCcce
Confidence 10 011445554433332210 011222222222211 2457777776665322 346
Q ss_pred EEEcCCccChhhhhhcc----eeEEeccCCcccccccCCeeecc
Q 003824 458 LAIGDGANDVGMLQEAD----IGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 458 laiGDG~ND~~ml~~Ad----vGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
+.+||++.|+.||+++. +.|+..|++- |..-||+++..
T Consensus 210 ~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvis 251 (315)
T COG4030 210 VVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVIS 251 (315)
T ss_pred eEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEec
Confidence 78999999999999874 5567778877 78889988776
No 109
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.12 E-value=0.042 Score=55.72 Aligned_cols=40 Identities=15% Similarity=0.168 Sum_probs=35.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.||+.++++.|++.|++++++|+-....+......+|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCCh
Confidence 5789999999999999999999999887777777777776
No 110
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.08 E-value=0.023 Score=56.65 Aligned_cols=43 Identities=21% Similarity=0.108 Sum_probs=38.3
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
.+++.++++++++.|++.|+++.++||.....+..+.+..|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4557778899999999999999999999999999998888874
No 111
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.07 E-value=0.012 Score=60.12 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=35.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCC----chhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGD----KMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD----~~~ta~~ia~~~gi~ 344 (793)
.+.+++.+.++.+++.|+++.++|+. ...++..+.+..|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 34555999999999999999999998 566888888888873
No 112
>PRK06769 hypothetical protein; Validated
Probab=96.07 E-value=0.045 Score=53.26 Aligned_cols=27 Identities=22% Similarity=0.220 Sum_probs=24.8
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCch
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKM 331 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~ 331 (793)
+.||++++++.|++.|+++.++|+...
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 689999999999999999999998753
No 113
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.02 E-value=0.055 Score=61.59 Aligned_cols=41 Identities=15% Similarity=0.087 Sum_probs=37.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.||+.+.++.|++.|+++.++|+-....+..+...+|+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~ 370 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD 370 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH
Confidence 68899999999999999999999999999999988888874
No 114
>PLN03017 trehalose-phosphatase
Probab=95.98 E-value=0.62 Score=50.44 Aligned_cols=207 Identities=10% Similarity=0.022 Sum_probs=100.8
Q ss_pred CceEEEEEeeec--ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHc--CccccCceEEEEccCCCcccc-----
Q 003824 292 NLILLGATAVED--KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC--SLLRQGMRQVIISSETPESKT----- 362 (793)
Q Consensus 292 ~l~~lG~~~ieD--~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~--gi~~~~~~~~~i~~~~~~~~~----- 362 (793)
|.||+-++.-.| .+-+++.++|++|. .|++++++||+.......+..-. .++..++..+.-.........
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~~ 197 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQS 197 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcceeccccccc
Confidence 666665554333 37788999999999 78999999999999988774221 122222222111100000000
Q ss_pred cchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhc--------CCeeEE
Q 003824 363 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG--------CASVIC 434 (793)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~--------~~~vi~ 434 (793)
........ .......+...+...........-....+++.+.-.......-.++..++..++.. .+.|+=
T Consensus 198 ~~~~~~~~--~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlE 275 (366)
T PLN03017 198 LLYQPAND--YLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFE 275 (366)
T ss_pred cccccchh--hHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEE
Confidence 00000000 00011112222221111111111122344444443332221111223333332222 222333
Q ss_pred EcCC-hhhHHHHHHHHHhcCC------CeEEEEcCCccChhhhhhcc-----eeEEeccCCcccccccCCeeecchhhHH
Q 003824 435 CRSS-PKQKALVTRLVKTKTS------STTLAIGDGANDVGMLQEAD-----IGVGISGVEGMQAVMSSDIAIAQFRFLE 502 (793)
Q Consensus 435 ~r~s-P~qK~~iv~~lk~~~~------~~vlaiGDG~ND~~ml~~Ad-----vGI~i~g~~~~~a~~~aD~~i~~f~~l~ 502 (793)
.|.. --+|+..++.+.+..+ ..++++||-..|-.|++..+ +||.++...+ ...|+|.+.+-..+.
T Consensus 276 vRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~dp~eV~ 352 (366)
T PLN03017 276 IRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQDPSEVM 352 (366)
T ss_pred ecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCCCHHHHH
Confidence 3322 2389998888776432 36899999999999998763 4554532122 357899998866554
Q ss_pred HH
Q 003824 503 RL 504 (793)
Q Consensus 503 ~l 504 (793)
.+
T Consensus 353 ~f 354 (366)
T PLN03017 353 DF 354 (366)
T ss_pred HH
Confidence 44
No 115
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=95.98 E-value=0.032 Score=57.87 Aligned_cols=41 Identities=22% Similarity=0.089 Sum_probs=37.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.||+.++++.|++.|+++.++|+-....+..+-...|+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999888888888874
No 116
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.93 E-value=0.041 Score=58.32 Aligned_cols=37 Identities=27% Similarity=0.285 Sum_probs=31.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 340 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~ 340 (793)
++.||+.++++.|++.|+++.++|+-.......+-..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~ 180 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNT 180 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence 5789999999999999999999999877666555443
No 117
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.89 E-value=0.21 Score=48.92 Aligned_cols=46 Identities=7% Similarity=0.126 Sum_probs=35.4
Q ss_pred ChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc-----ccCceEEEE
Q 003824 308 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL-----RQGMRQVII 353 (793)
Q Consensus 308 ~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~-----~~~~~~~~i 353 (793)
.+.+.+..|+++|+.|+.+|.-....-...-+++|+- ..++..+.+
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~ 77 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYL 77 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEe
Confidence 4668899999999999999998887777777888763 444444444
No 118
>PRK09449 dUMP phosphatase; Provisional
Probab=95.76 E-value=0.091 Score=53.42 Aligned_cols=39 Identities=18% Similarity=0.091 Sum_probs=32.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.+|+.++++.|+ +|+++.++|+.....+...-...|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 47899999999999 6899999999877777666666665
No 119
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.73 E-value=0.048 Score=50.35 Aligned_cols=41 Identities=20% Similarity=0.230 Sum_probs=33.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCc--------hhhHHHHHHHcCc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDK--------METAINIGFACSL 343 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~--------~~ta~~ia~~~gi 343 (793)
-++.+++.++++.|+++|+++.++|+.. ...+..+...+|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3578999999999999999999999987 5556666666665
No 120
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=95.71 E-value=0.026 Score=57.57 Aligned_cols=40 Identities=13% Similarity=0.167 Sum_probs=34.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCc----hhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDK----METAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~----~~ta~~ia~~~gi 343 (793)
.+.+++.+.++.|++.|+++.++||+. ..|+..+.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 477889999999999999999999975 4578888877776
No 121
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.64 E-value=0.1 Score=51.17 Aligned_cols=53 Identities=15% Similarity=0.118 Sum_probs=35.9
Q ss_pred CCCeEEEEcCCccChhhhhhcceeE-Eec-cCCc-ccccccC--CeeecchhhHHHHH
Q 003824 453 TSSTTLAIGDGANDVGMLQEADIGV-GIS-GVEG-MQAVMSS--DIAIAQFRFLERLL 505 (793)
Q Consensus 453 ~~~~vlaiGDG~ND~~ml~~AdvGI-~i~-g~~~-~~a~~~a--D~~i~~f~~l~~ll 505 (793)
....+++|||+.+|+.+-+.|++.. ++. |... ......+ |+++.++..+..++
T Consensus 119 ~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l 176 (181)
T PRK08942 119 DLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQAL 176 (181)
T ss_pred ChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHH
Confidence 3467999999999999999999854 332 2111 1112335 88988887776653
No 122
>PLN02940 riboflavin kinase
Probab=95.36 E-value=0.067 Score=59.13 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=32.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHH-HcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGF-ACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~-~~gi 343 (793)
++.+|+.++++.|++.|+++.|+|+-....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999998777665543 4454
No 123
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.34 E-value=0.071 Score=50.57 Aligned_cols=38 Identities=16% Similarity=0.248 Sum_probs=31.9
Q ss_pred hhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEE
Q 003824 440 KQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVG 478 (793)
Q Consensus 440 ~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~ 478 (793)
.+|..+|+.+++ +.+.+.++|||+.|+++-+.+|+=.|
T Consensus 146 ~dK~~vI~~l~e-~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 146 HDKSSVIHELSE-PNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CCcchhHHHhhc-CCceEEEecCCcccccHhhhhhhHhh
Confidence 478999999998 78889999999999988777776554
No 124
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.33 E-value=0.062 Score=53.46 Aligned_cols=40 Identities=18% Similarity=0.222 Sum_probs=35.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.+++.++++.|++.|+++.++|+-+...+..+....|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl 131 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGL 131 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 5789999999999999999999999888877777777776
No 125
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.32 E-value=0.042 Score=58.77 Aligned_cols=44 Identities=20% Similarity=0.083 Sum_probs=40.2
Q ss_pred eecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 301 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 301 ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
..+++.+++.++|+.|++.|++++++||....++..+.+.+++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 56789999999999999999999999999999999888888763
No 126
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.18 E-value=0.048 Score=52.51 Aligned_cols=43 Identities=21% Similarity=0.205 Sum_probs=39.1
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
..++.+++.+.++.|++.|++++++|+-+........+..|+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 3478999999999999999999999999999888899888875
No 127
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.12 E-value=0.12 Score=52.53 Aligned_cols=41 Identities=15% Similarity=0.055 Sum_probs=34.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+|+.++++.|+++|+++.++|+-....+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 57899999999999999999999998877777666666653
No 128
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.06 E-value=0.15 Score=51.66 Aligned_cols=40 Identities=25% Similarity=0.322 Sum_probs=35.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+|+.++++.|++. +++.++|+-....+..+.+..|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 5789999999999999 999999998888887777777763
No 129
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=94.98 E-value=0.06 Score=52.82 Aligned_cols=38 Identities=21% Similarity=0.261 Sum_probs=30.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.||+.++|+.|+++|+++.++|+... +..+.+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 6789999999999999999999997532 3445555554
No 130
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=94.68 E-value=0.13 Score=50.21 Aligned_cols=39 Identities=26% Similarity=0.239 Sum_probs=32.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.|++.++++.|++.|++++++|+-.... ..+...+|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l 123 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGL 123 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCC
Confidence 588999999999999999999999987766 444444665
No 131
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.66 E-value=0.15 Score=49.47 Aligned_cols=51 Identities=22% Similarity=0.181 Sum_probs=41.2
Q ss_pred eEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCC-chhhHHHHHHHcCcc
Q 003824 294 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGD-KMETAINIGFACSLL 344 (793)
Q Consensus 294 ~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD-~~~ta~~ia~~~gi~ 344 (793)
......+-+-++.+|+.++++.|+++|+++.++|+- ....+..+-...|+-
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 344445555678999999999999999999999975 788888887777763
No 132
>PLN02811 hydrolase
Probab=94.66 E-value=0.12 Score=52.48 Aligned_cols=30 Identities=23% Similarity=0.376 Sum_probs=26.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhh
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMET 333 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~t 333 (793)
++.+|+.++|+.|++.|+++.++||-....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~ 107 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRH 107 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhh
Confidence 578999999999999999999999876543
No 133
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=94.63 E-value=0.082 Score=51.81 Aligned_cols=39 Identities=18% Similarity=0.244 Sum_probs=32.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
-++.||+.++++.|++.|+++.++|+. ..+..+-+..|+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l 125 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGL 125 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcCh
Confidence 368999999999999999999999987 445556666665
No 134
>PLN02151 trehalose-phosphatase
Probab=94.11 E-value=1.9 Score=46.62 Aligned_cols=234 Identities=13% Similarity=0.085 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHhhhccccHHHHHHHHHHHhh---------cCceEEEEEeeec--ccCCChHHHHHHHHHcCCeEEEE
Q 003824 258 KEYKQFNEEFTEAKNSVSADREELAEEIAEKIE---------KNLILLGATAVED--KLQNGVPECIDKLAQAGIKLWVL 326 (793)
Q Consensus 258 ~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie---------~~l~~lG~~~ieD--~lr~~v~~~I~~L~~agIkv~ml 326 (793)
++|..|..++..|...+ ++...... -|.||+-++---| .+-+++.++|+.|. .+..++++
T Consensus 71 ~~~~~w~~~~p~a~~~~--------~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIv 141 (354)
T PLN02151 71 NKQSCWIKEHPSALNMF--------EEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIV 141 (354)
T ss_pred hhHHHHHHhCChHHHHH--------HHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEE
Confidence 57899999988776544 22222222 2333332221222 25567888999999 56799999
Q ss_pred eCCchhhHHHHHHHcCc--cccCceEEEEccCCCcccccchh----hhHHHHHHHHHHHHHHHHhhhhhccccccCCCCC
Q 003824 327 TGDKMETAINIGFACSL--LRQGMRQVIISSETPESKTLEKS----EDKSAAAAALKASVLHQLIRGKELLDSSNESLGP 400 (793)
Q Consensus 327 TGD~~~ta~~ia~~~gi--~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (793)
||+..........-.++ ....+-.+...... ......+. ...... ....+.+...+...........-....
T Consensus 142 SGR~~~~l~~~~~~~~l~laGsHG~e~~~p~~g-~~~~~~~~~~~~~~~~~~-~~~i~~v~~~l~~~~~~~pG~~VE~K~ 219 (354)
T PLN02151 142 SGRCREKVSSFVKLTELYYAGSHGMDIKGPEQG-SKYKKENQSLLCQPATEF-LPVINEVYKKLVEKTKSIPGAKVENNK 219 (354)
T ss_pred ECCCHHHHHHHcCCccceEEEeCCceeecCCCC-ccccccccccccccchhh-HHHHHHHHHHHHHHHhcCCCCEEEecC
Confidence 99999888777643332 11111111000000 00000000 000000 001111111221111111111111233
Q ss_pred eEEEEeCchhhHhhhhhHHHHHHHHHhc--------CCeeEEEcCC-hhhHHHHHHHHHhcCC------CeEEEEcCCcc
Q 003824 401 LALIIDGKSLTYALEDDVKDLFLELAIG--------CASVICCRSS-PKQKALVTRLVKTKTS------STTLAIGDGAN 465 (793)
Q Consensus 401 ~~lvi~G~~l~~~~~~~~~~~~~~l~~~--------~~~vi~~r~s-P~qK~~iv~~lk~~~~------~~vlaiGDG~N 465 (793)
+++.+.-.....-...++..++..++.. .+.|+=.|.. .-+|+..++.+.+..+ ..++++||-..
T Consensus 220 ~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~T 299 (354)
T PLN02151 220 FCASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRT 299 (354)
T ss_pred cEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCc
Confidence 4444433222111001222333332222 2333333432 3489999888776432 24899999999
Q ss_pred Chhhhhhc-----ceeEEeccCCcccccccCCeeecchhhHHHHH
Q 003824 466 DVGMLQEA-----DIGVGISGVEGMQAVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 466 D~~ml~~A-----dvGI~i~g~~~~~a~~~aD~~i~~f~~l~~ll 505 (793)
|-.|++.. ++||-++... ....|+|.+.+-..+..+|
T Consensus 300 DEDaF~~L~~~~~G~gI~Vg~~~---k~T~A~y~L~dp~eV~~~L 341 (354)
T PLN02151 300 DEDAFKILRDKKQGLGILVSKYA---KETNASYSLQEPDEVMEFL 341 (354)
T ss_pred HHHHHHHHhhcCCCccEEeccCC---CCCcceEeCCCHHHHHHHH
Confidence 99999864 4555443211 1247899998866655553
No 135
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=93.91 E-value=0.2 Score=47.48 Aligned_cols=40 Identities=20% Similarity=0.335 Sum_probs=33.0
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHc
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 341 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~ 341 (793)
+.+..+|+.+.++.|++.|+++.++|+-....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 3445689999999999999999999999888777665543
No 136
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=93.59 E-value=0.49 Score=46.12 Aligned_cols=48 Identities=19% Similarity=0.182 Sum_probs=33.2
Q ss_pred CCeEEEEcCCccChhhhhhccee--EEe-ccCCcc-cccccCCeeecchhhH
Q 003824 454 SSTTLAIGDGANDVGMLQEADIG--VGI-SGVEGM-QAVMSSDIAIAQFRFL 501 (793)
Q Consensus 454 ~~~vlaiGDG~ND~~ml~~AdvG--I~i-~g~~~~-~a~~~aD~~i~~f~~l 501 (793)
...++||||..+|+.+=+.|++. |++ .|.... .....+|+++.++..|
T Consensus 123 ~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 123 MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 36789999999999999999985 344 232211 1123489998876654
No 137
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.25 E-value=0.42 Score=49.64 Aligned_cols=33 Identities=12% Similarity=0.288 Sum_probs=28.1
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhH
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETA 334 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta 334 (793)
..++-||+.+.++.|++.|+++.++|++.....
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~ 148 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEK 148 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchH
Confidence 345789999999999999999999999875433
No 138
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=93.06 E-value=0.13 Score=48.56 Aligned_cols=42 Identities=21% Similarity=0.041 Sum_probs=36.5
Q ss_pred eecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 301 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 301 ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
..-+++||+.+.++.|+ .++++.+.|+-....+..+-+.+++
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 33468999999999999 5799999999999999988877775
No 139
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=93.04 E-value=0.34 Score=48.31 Aligned_cols=39 Identities=15% Similarity=0.116 Sum_probs=30.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++-||+.++++.|++.|+++.++|+-... +......+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 57899999999999999999999985543 3445555554
No 140
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=93.00 E-value=0.35 Score=46.84 Aligned_cols=40 Identities=20% Similarity=0.302 Sum_probs=32.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCc-hhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDK-METAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~-~~ta~~ia~~~gi 343 (793)
.+.+++.++++.|++.|+++.++|+-+ ...+..+.+.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 578999999999999999999999987 4555566555554
No 141
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=92.68 E-value=0.37 Score=46.22 Aligned_cols=26 Identities=31% Similarity=0.511 Sum_probs=23.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCC
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGD 329 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD 329 (793)
++-+|+.++++.|+++|+++.++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46789999999999999999999975
No 142
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=92.41 E-value=0.3 Score=45.99 Aligned_cols=27 Identities=26% Similarity=0.369 Sum_probs=24.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDK 330 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~ 330 (793)
++.||+.++++.|++.|+++.++|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999999999999999875
No 143
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=91.93 E-value=1 Score=46.22 Aligned_cols=187 Identities=13% Similarity=0.093 Sum_probs=73.0
Q ss_pred ccCCChHHHHHHHHHcC-CeEEEEeCCchhhHHHHHHH--cCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAG-IKLWVLTGDKMETAINIGFA--CSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 380 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~ag-Ikv~mlTGD~~~ta~~ia~~--~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (793)
.+.+++.++++.|.+.. ..|+|+||++.........- ++++.+++..+...+......... ...... .+.+
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~~~-~~~~~~-----~~~~ 92 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNLPA-DEDLEW-----KDEV 92 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-TTG-GGGHHH-----HHHH
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCcccccccccc-ccchHH-----HHHH
Confidence 45578889999998764 47999999999886555422 334444444333333321111000 111111 1111
Q ss_pred HHHHhhhhhccccccCCCCCeEEEEeCchhhHh----hhhhHHHHHHHHH--------hcCCeeEEEcCChhhHHHHHHH
Q 003824 381 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYA----LEDDVKDLFLELA--------IGCASVICCRSSPKQKALVTRL 448 (793)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~----~~~~~~~~~~~l~--------~~~~~vi~~r~sP~qK~~iv~~ 448 (793)
...+...........-.....++.+.-.....- ...++...+..+. ...+.+|=.|..-..|+..|+.
T Consensus 93 ~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~~~~KG~av~~ 172 (235)
T PF02358_consen 93 REILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEVRPPGVNKGSAVRR 172 (235)
T ss_dssp HHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-TT--HHHHHHH
T ss_pred HHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeCCCChHHHHHH
Confidence 111111111111000011122333322221111 1112222222221 2234556666666669999997
Q ss_pred HHhcCC------CeEEEEcCCccChhhhhhc------ceeEEeccCCcccccccCCeeec
Q 003824 449 VKTKTS------STTLAIGDGANDVGMLQEA------DIGVGISGVEGMQAVMSSDIAIA 496 (793)
Q Consensus 449 lk~~~~------~~vlaiGDG~ND~~ml~~A------dvGI~i~g~~~~~a~~~aD~~i~ 496 (793)
+-+..+ ..++++||...|-.|++.. ++||-+...+......+|+|-+.
T Consensus 173 ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~ 232 (235)
T PF02358_consen 173 LLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLD 232 (235)
T ss_dssp HHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----------------
T ss_pred HHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccc
Confidence 776544 3799999999999999874 45555544332223455666554
No 144
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=91.55 E-value=0.39 Score=44.06 Aligned_cols=39 Identities=10% Similarity=0.060 Sum_probs=32.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCC-chhhHHHHHHHcC
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGD-KMETAINIGFACS 342 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD-~~~ta~~ia~~~g 342 (793)
++.+|+.++++.|+++|+++.++|+- ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 6666655554444
No 145
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=91.01 E-value=0.47 Score=47.62 Aligned_cols=28 Identities=25% Similarity=0.280 Sum_probs=25.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCch
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKM 331 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~ 331 (793)
++.|++.++++.|++.|+++.++|+...
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~ 121 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFP 121 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5789999999999999999999998654
No 146
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=90.93 E-value=0.64 Score=50.41 Aligned_cols=27 Identities=33% Similarity=0.411 Sum_probs=24.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCC
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGD 329 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD 329 (793)
-++.|++.++++.|+++|+++.|+|+-
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 357899999999999999999999983
No 147
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=90.30 E-value=1.4 Score=41.63 Aligned_cols=113 Identities=19% Similarity=0.168 Sum_probs=69.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
|..++++.+..+.+++.|.+++.||++..--|...-.-+.=...+
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~----------------------------------- 70 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQ----------------------------------- 70 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhC-----------------------------------
Confidence 799999999999999999999999999865443322111000000
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc----CCCeEE
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK----TSSTTL 458 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~----~~~~vl 458 (793)
. ...+.-.+..+-..+-..+. .-+..+-.-+.|...++.++.. .....+
T Consensus 71 -----~-------~~lP~Gpv~~sP~~l~~al~---------------rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~a 123 (157)
T PF08235_consen 71 -----G-------HNLPDGPVLLSPDSLFSALH---------------REVISKDPEEFKIACLRDLRALFPPDGNPFYA 123 (157)
T ss_pred -----C-------ccCCCCCEEECCcchhhhhh---------------ccccccChHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 0 00011112222222111111 1144555556788888888764 457899
Q ss_pred EEcCCccChhhhhhcceeE
Q 003824 459 AIGDGANDVGMLQEADIGV 477 (793)
Q Consensus 459 aiGDG~ND~~ml~~AdvGI 477 (793)
++|...+|+.+.++++|--
T Consensus 124 gfGN~~tDv~aY~~vGip~ 142 (157)
T PF08235_consen 124 GFGNRSTDVIAYKAVGIPK 142 (157)
T ss_pred ecCCcHHHHHHHHHcCCCh
Confidence 9999999999999888753
No 148
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=90.04 E-value=1.2 Score=45.14 Aligned_cols=30 Identities=23% Similarity=0.285 Sum_probs=27.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhh
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMET 333 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~t 333 (793)
|.-+++.++++.|++.|++|+++||+....
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 677899999999999999999999998654
No 149
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=90.01 E-value=0.69 Score=46.81 Aligned_cols=37 Identities=5% Similarity=0.098 Sum_probs=29.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.+|++++++.| ++++.++|+.....+...-+..|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l 124 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGM 124 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcCh
Confidence 4678999999998 499999999887766666555665
No 150
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=89.76 E-value=1.6 Score=44.41 Aligned_cols=41 Identities=20% Similarity=0.169 Sum_probs=35.6
Q ss_pred ccCCChHHHHHHH--HHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKL--AQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L--~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
|+.++.+++++.+ ++.|+.+.++|--+..-...+-+.-|+-
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 5789999999999 5689999999999888888888888874
No 151
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=89.73 E-value=1.6 Score=44.14 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=31.1
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHH
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG 338 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia 338 (793)
+-++.+|+.++++.|+++|+++.++|..+......+-
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~ 129 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLF 129 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH
Confidence 3478999999999999999999999998766555444
No 152
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=89.54 E-value=1.6 Score=42.03 Aligned_cols=27 Identities=22% Similarity=0.406 Sum_probs=23.6
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCch
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKM 331 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~ 331 (793)
+-+|+.++++.|+++|+++.++|....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999997543
No 153
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=88.44 E-value=1.8 Score=54.45 Aligned_cols=41 Identities=20% Similarity=0.024 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
.+.+|+.+.++.|+++|+++.++|+-....+..+-...|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 46799999999999999999999999888887777777763
No 154
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=87.95 E-value=0.98 Score=48.70 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=32.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 340 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~ 340 (793)
++-++++++|+.|++.|+++.++|.-+...|..+-..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 3568999999999999999999999998888877765
No 155
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=87.42 E-value=2.9 Score=42.99 Aligned_cols=47 Identities=9% Similarity=0.133 Sum_probs=35.7
Q ss_pred EEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHH--HHHHHcCc
Q 003824 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI--NIGFACSL 343 (793)
Q Consensus 297 G~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~--~ia~~~gi 343 (793)
|.+.-.+.+-|+++++++.|+++|+++.++|.-....+. ......|+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl 65 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGI 65 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCC
Confidence 555556778999999999999999999999995443333 34455665
No 156
>PHA02597 30.2 hypothetical protein; Provisional
Probab=86.77 E-value=2.6 Score=41.72 Aligned_cols=39 Identities=13% Similarity=0.058 Sum_probs=25.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.||+.++++.|++.+ +.+++|.-+..+....-+..++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l 112 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNL 112 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCH
Confidence 47899999999999975 5677776544433333333443
No 157
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=86.31 E-value=5.7 Score=39.30 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=32.2
Q ss_pred ccCCChHHHHHHHHHcCC-eEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGI-KLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agI-kv~mlTGD~~~ta~~ia~~~gi 343 (793)
|+-|++.++|+.+++.|- .++++|--|.--...+-+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 678999999999999997 8888888777666666666655
No 158
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=86.17 E-value=0.71 Score=40.39 Aligned_cols=47 Identities=17% Similarity=0.196 Sum_probs=35.5
Q ss_pred EEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHH---HHcCc
Q 003824 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG---FACSL 343 (793)
Q Consensus 297 G~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia---~~~gi 343 (793)
|++...+.+=|++.++|+.|+++|++++++|.....+...++ +.+|+
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 455567788999999999999999999999999877755555 44555
No 159
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=84.89 E-value=4.2 Score=39.53 Aligned_cols=46 Identities=20% Similarity=0.411 Sum_probs=33.8
Q ss_pred eeEEEcCChhh--------HHHHHHHHHhcC--CCeEEEEcCCccChhhhhhccee
Q 003824 431 SVICCRSSPKQ--------KALVTRLVKTKT--SSTTLAIGDGANDVGMLQEADIG 476 (793)
Q Consensus 431 ~vi~~r~sP~q--------K~~iv~~lk~~~--~~~vlaiGDG~ND~~ml~~AdvG 476 (793)
.+.+|.-.|++ ...+.+.++++. -....+|||-..|..+=..|+++
T Consensus 89 ~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 89 GILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred eEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 44566666663 467777777732 26789999999999988888876
No 160
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=83.14 E-value=2.6 Score=41.89 Aligned_cols=30 Identities=23% Similarity=0.287 Sum_probs=26.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhh
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMET 333 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~t 333 (793)
++.||+.++++.|+++|+++.++|.-+...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 478999999999999999999999966443
No 161
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=80.73 E-value=23 Score=40.54 Aligned_cols=119 Identities=16% Similarity=0.219 Sum_probs=66.1
Q ss_pred hhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchhhHHHHHHHhhhhHHhHhhH
Q 003824 439 PKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISS 518 (793)
Q Consensus 439 P~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~l~~lll~~GR~~~~~i~~ 518 (793)
-++|..-++.... ......+.||+.||.+||+.|+-+..+..+.. . .+...++.+++++..||..+.-.-.
T Consensus 174 Ge~Kv~rl~~~~g-~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~------~--~~~~~~~~~~~~fhdgrl~~~p~~~ 244 (497)
T PLN02177 174 GDHKRDAVLKEFG-DALPDLGLGDRETDHDFMSICKEGYMVPRTKC------E--PLPRNKLLSPVIFHEGRLVQRPTPL 244 (497)
T ss_pred cHHHHHHHHHHhC-CCCceEEEECCccHHHHHHhCCccEEeCCCCC------C--cCCcccCCCceeeeCCcccCCCCHH
Confidence 4567665552211 11223799999999999999999998854221 1 1445567778866679998866554
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHHHHHHhhccccceeeecc
Q 003824 519 MICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVF 572 (793)
Q Consensus 519 ~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~lp~l~l~~~ 572 (793)
..+..+.. +-+.+++.+.-++.+. . .+..+..+.+-...+.+-+.|.+
T Consensus 245 ~~l~~~~~-~p~g~~l~~~r~~~~~---~--lp~~~~~~~~~~~Gv~v~v~G~e 292 (497)
T PLN02177 245 VALLTFLW-MPIGFILSLLRVYLNI---P--LPERIARYNYKLLGIRLIVKGNP 292 (497)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHhh---h--hHHHHHHHHHHHcCcEEEEEcCC
Confidence 44444333 1333333333333321 1 12222333334445566666643
No 162
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=80.72 E-value=2.9 Score=43.49 Aligned_cols=47 Identities=19% Similarity=0.262 Sum_probs=36.6
Q ss_pred EEEeeecc----cCCChHHHHHHHHHcCCeEEEEeCCchhh---HHHHHHHcCc
Q 003824 297 GATAVEDK----LQNGVPECIDKLAQAGIKLWVLTGDKMET---AINIGFACSL 343 (793)
Q Consensus 297 G~~~ieD~----lr~~v~~~I~~L~~agIkv~mlTGD~~~t---a~~ia~~~gi 343 (793)
|++.-.+. +-|++.++|+.|+++|++++++||.+..+ ......++|+
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~ 63 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGF 63 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCC
Confidence 44445455 78899999999999999999999988776 4444455665
No 163
>PRK10444 UMP phosphatase; Provisional
Probab=80.42 E-value=2.1 Score=44.32 Aligned_cols=45 Identities=18% Similarity=0.283 Sum_probs=39.8
Q ss_pred EEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHc
Q 003824 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 341 (793)
Q Consensus 297 G~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~ 341 (793)
|++.-.+.+-|++.++|+.|+++|++++++||....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 566666788999999999999999999999999999888888764
No 164
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=79.99 E-value=49 Score=34.42 Aligned_cols=169 Identities=11% Similarity=0.005 Sum_probs=86.8
Q ss_pred EeeecccCCChHHHHHHHHHc-CCeEEEEeCCchhhHHHHHH--HcCccccCceEE-EEccCCCcccccchhhhHHHHHH
Q 003824 299 TAVEDKLQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGF--ACSLLRQGMRQV-IISSETPESKTLEKSEDKSAAAA 374 (793)
Q Consensus 299 ~~ieD~lr~~v~~~I~~L~~a-gIkv~mlTGD~~~ta~~ia~--~~gi~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~ 374 (793)
-.....+-++..++++.|... ..-+||+||++..-...... .+|++..++... .+++..... ........
T Consensus 35 ~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~---~~~~~~~~--- 108 (266)
T COG1877 35 HPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWIN---LAEEADLR--- 108 (266)
T ss_pred CccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEe---cCHHHHhh---
Confidence 344556777888999999877 55799999999988877765 334454444433 333322110 00000000
Q ss_pred HHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhh--hHHHHHH-----HH-HhcCCeeEEEcCChhhHHHHH
Q 003824 375 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALED--DVKDLFL-----EL-AIGCASVICCRSSPKQKALVT 446 (793)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~--~~~~~~~-----~l-~~~~~~vi~~r~sP~qK~~iv 446 (793)
..+.+...+.......+...-....+++.+.-.....-... .+..... ++ ....+.+|-+|.+-..|+.++
T Consensus 109 -~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~ 187 (266)
T COG1877 109 -WLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAI 187 (266)
T ss_pred -HHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHH
Confidence 01112222222112222110011112222211110000000 0000000 01 123467889998888899999
Q ss_pred HHHHhcCC---CeEEEEcCCccChhhhhhcc
Q 003824 447 RLVKTKTS---STTLAIGDGANDVGMLQEAD 474 (793)
Q Consensus 447 ~~lk~~~~---~~vlaiGDG~ND~~ml~~Ad 474 (793)
+.+.+... ..+++.||-..|-.|++..+
T Consensus 188 ~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 188 KYIMDELPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred HHHHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence 97766433 35899999999999999988
No 165
>PLN02645 phosphoglycolate phosphatase
Probab=79.40 E-value=3.3 Score=44.42 Aligned_cols=48 Identities=33% Similarity=0.426 Sum_probs=40.4
Q ss_pred EEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHH---HHcCcc
Q 003824 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG---FACSLL 344 (793)
Q Consensus 297 G~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia---~~~gi~ 344 (793)
|++.-.+.+-+++.++|+.|++.|++++++|+....+...++ +.+|+-
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 666666778899999999999999999999999988877777 557763
No 166
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=78.38 E-value=3 Score=43.56 Aligned_cols=41 Identities=12% Similarity=0.152 Sum_probs=37.6
Q ss_pred cC-CChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccc
Q 003824 305 LQ-NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 345 (793)
Q Consensus 305 lr-~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~ 345 (793)
+| |++.++++.|+++|+++.++|+-....+...-..+||..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999989999999864
No 167
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=78.38 E-value=6.1 Score=37.46 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=34.7
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
.-|++.+=+..++++|+++.++|.-+...+...+..+|+
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 567888889999999999999999988888888888876
No 168
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=77.79 E-value=4.6 Score=41.79 Aligned_cols=48 Identities=10% Similarity=0.095 Sum_probs=38.9
Q ss_pred EEEeeecccCCChHHHHHHHHHcCCeEEEEeC---CchhhHHHHHHHcCcc
Q 003824 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTG---DKMETAINIGFACSLL 344 (793)
Q Consensus 297 G~~~ieD~lr~~v~~~I~~L~~agIkv~mlTG---D~~~ta~~ia~~~gi~ 344 (793)
|++.-.+.+-+++.++|+.|++.|++++++|| +..+......++.|+-
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44444566678999999999999999999996 6777777777888874
No 169
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=76.39 E-value=10 Score=36.38 Aligned_cols=43 Identities=19% Similarity=0.209 Sum_probs=34.2
Q ss_pred eecccCCChHHHHHHHHHcCCe--EEEEeCC-------chhhHHHHHHHcCc
Q 003824 301 VEDKLQNGVPECIDKLAQAGIK--LWVLTGD-------KMETAINIGFACSL 343 (793)
Q Consensus 301 ieD~lr~~v~~~I~~L~~agIk--v~mlTGD-------~~~ta~~ia~~~gi 343 (793)
=++.+-+++.+.+++|++.+.. |+++|-- +...|..+++.+|+
T Consensus 56 ~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 56 YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 3567889999999999999874 9999875 36677777777775
No 170
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=75.75 E-value=6.3 Score=40.18 Aligned_cols=30 Identities=20% Similarity=0.295 Sum_probs=26.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchh
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKME 332 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ 332 (793)
++.-|++.+.++.+++.|++|..+||++..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 456688999999999999999999999864
No 171
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=75.71 E-value=60 Score=32.42 Aligned_cols=22 Identities=14% Similarity=0.415 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHhccCc
Q 003824 670 LFIWGGITFWYIFLLAYGAMDP 691 (793)
Q Consensus 670 ~~i~~si~~~~i~~~i~~~i~~ 691 (793)
...++.+++|+++..+...+|+
T Consensus 151 ~~~~~~~~~w~~~~~~~~~lp~ 172 (206)
T PF06570_consen 151 LISVLAMVLWIVIFVLTSFLPP 172 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHccc
Confidence 3445556666666655555665
No 172
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=74.27 E-value=8.3 Score=37.54 Aligned_cols=38 Identities=11% Similarity=-0.020 Sum_probs=31.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+++.++++.|+ .+++++|+-+...+..+....|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 36789999999997 479999998888888887777763
No 173
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=73.68 E-value=8.7 Score=37.44 Aligned_cols=35 Identities=17% Similarity=0.024 Sum_probs=29.5
Q ss_pred hHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 309 VPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 309 v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
..++++.|++. +++.++||-....+..+-...|+.
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~ 126 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLR 126 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcH
Confidence 36899999875 899999999888888888888864
No 174
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=73.44 E-value=4.8 Score=42.16 Aligned_cols=40 Identities=18% Similarity=0.141 Sum_probs=35.9
Q ss_pred cC-CChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 305 LQ-NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 305 lr-~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
+| |++.++++.|+++|+++.++|+-..+.+..+....|+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 45 89999999999999999999987788888899999984
No 175
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=70.82 E-value=3.7 Score=37.44 Aligned_cols=33 Identities=15% Similarity=0.079 Sum_probs=28.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHH
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI 335 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~ 335 (793)
+++.+++.++++.+++.|++++++||+......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 567789999999999999999999999887654
No 176
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=69.58 E-value=54 Score=32.84 Aligned_cols=40 Identities=20% Similarity=0.070 Sum_probs=32.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++-+++.++++.++.. .+++++|--....+.....++||.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~ 138 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLL 138 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCCh
Confidence 4667888888888888 889999997777777888888853
No 177
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=69.15 E-value=20 Score=36.31 Aligned_cols=43 Identities=28% Similarity=0.237 Sum_probs=38.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 345 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~ 345 (793)
.++.+|+.++++.|++.|+++.+.|+-....+..+....|+..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~ 127 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD 127 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh
Confidence 3688999999999999999999999999888888888888754
No 178
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=68.34 E-value=23 Score=36.79 Aligned_cols=53 Identities=19% Similarity=0.314 Sum_probs=35.5
Q ss_pred CCCeEEEEcCCc-cChhhhhhcceeE-Ee-ccCC----cccccccCCeeecchhhHHHHH
Q 003824 453 TSSTTLAIGDGA-NDVGMLQEADIGV-GI-SGVE----GMQAVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 453 ~~~~vlaiGDG~-ND~~ml~~AdvGI-~i-~g~~----~~~a~~~aD~~i~~f~~l~~ll 505 (793)
....++||||.. +|+.+=+.+++-- .+ .|.. .......+|+++.++..+..++
T Consensus 195 ~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 195 EPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred ChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 347899999996 8999888887743 44 2321 1112345788888877776654
No 179
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=66.75 E-value=29 Score=35.44 Aligned_cols=27 Identities=15% Similarity=0.270 Sum_probs=22.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCch
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKM 331 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~ 331 (793)
++-||++++++.|++. +++.++|.-+.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~ 139 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNA 139 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCc
Confidence 4668999999999975 89999998654
No 180
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=63.93 E-value=32 Score=35.77 Aligned_cols=31 Identities=23% Similarity=0.281 Sum_probs=27.0
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchh
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKME 332 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ 332 (793)
+.|.-|++.+..+.+++.|++|+++||+...
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 3466789999999999999999999999853
No 181
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=61.94 E-value=2.6 Score=42.85 Aligned_cols=14 Identities=21% Similarity=0.750 Sum_probs=0.0
Q ss_pred cChHHHHHHHHHHH
Q 003824 707 PAPSFWLITLLVLM 720 (793)
Q Consensus 707 ~s~~~wl~~l~~~~ 720 (793)
+.-.+|+++++.+.
T Consensus 167 L~dL~WL~LFlaiL 180 (381)
T PF05297_consen 167 LVDLYWLLLFLAIL 180 (381)
T ss_dssp --------------
T ss_pred HHHHHHHHHHHHHH
Confidence 34567877655433
No 182
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=58.87 E-value=16 Score=29.59 Aligned_cols=48 Identities=21% Similarity=0.328 Sum_probs=33.5
Q ss_pred CCCeEEEEcCC-ccChhhhhhcceeE-Ee-ccCCccc----ccccCCeeecchhh
Q 003824 453 TSSTTLAIGDG-ANDVGMLQEADIGV-GI-SGVEGMQ----AVMSSDIAIAQFRF 500 (793)
Q Consensus 453 ~~~~vlaiGDG-~ND~~ml~~AdvGI-~i-~g~~~~~----a~~~aD~~i~~f~~ 500 (793)
....++||||. ..|+.+=+++++-- .+ +|..... ....+|+++.++..
T Consensus 20 ~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 20 DPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp GGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred CHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 34679999999 99999999998844 44 3332221 13578999887653
No 183
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=58.45 E-value=36 Score=39.17 Aligned_cols=27 Identities=22% Similarity=0.432 Sum_probs=24.2
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCch
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKM 331 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~ 331 (793)
+-++++++|+.|+++|++++|+|.-..
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 469999999999999999999998544
No 184
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=58.23 E-value=1.6e+02 Score=36.83 Aligned_cols=65 Identities=18% Similarity=0.386 Sum_probs=45.3
Q ss_pred hHHHHHHHHHhcCCeeEEEc-----CChh--hHHHHHHHHHhcCC----CeEEEEcCCcc-C-hhhhhhcceeEEecc
Q 003824 417 DVKDLFLELAIGCASVICCR-----SSPK--QKALVTRLVKTKTS----STTLAIGDGAN-D-VGMLQEADIGVGISG 481 (793)
Q Consensus 417 ~~~~~~~~l~~~~~~vi~~r-----~sP~--qK~~iv~~lk~~~~----~~vlaiGDG~N-D-~~ml~~AdvGI~i~g 481 (793)
++++.+......|+.+.++. +-|. .|.+.++.|..+-| +++..+||..| | ..|+.--|-+|-+.|
T Consensus 925 elr~~Lr~~gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g 1002 (1050)
T TIGR02468 925 ELRKLLRIQGLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKG 1002 (1050)
T ss_pred HHHHHHHhCCCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEec
Confidence 56666666666777433322 3443 69999999887644 55677999999 9 668888888885544
No 185
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=58.00 E-value=13 Score=39.01 Aligned_cols=49 Identities=20% Similarity=0.288 Sum_probs=36.1
Q ss_pred EEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHH---HHHHcCccc
Q 003824 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAIN---IGFACSLLR 345 (793)
Q Consensus 297 G~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~---ia~~~gi~~ 345 (793)
|++.-.+.+-+++.++|+.|++.|++++++||....+... --+.+|+..
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 4444456778899999999999999999999976544433 235567643
No 186
>PTZ00445 p36-lilke protein; Provisional
Probab=56.48 E-value=18 Score=35.91 Aligned_cols=29 Identities=21% Similarity=0.139 Sum_probs=25.0
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhh
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMET 333 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~t 333 (793)
++|+.++-++.|+++||+|.++|=-..++
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 68889999999999999999999655544
No 187
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=56.38 E-value=23 Score=34.80 Aligned_cols=48 Identities=25% Similarity=0.303 Sum_probs=41.5
Q ss_pred ceEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHH
Q 003824 293 LILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 340 (793)
Q Consensus 293 l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~ 340 (793)
+.+-|.+-+||-.-|++.|+++.|+.++.+|..+|.-+.+.-..+...
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~r 59 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHER 59 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHH
Confidence 345699999999999999999999999999999998887776666644
No 188
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=51.47 E-value=22 Score=37.08 Aligned_cols=44 Identities=18% Similarity=0.247 Sum_probs=38.6
Q ss_pred EEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHH
Q 003824 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 340 (793)
Q Consensus 297 G~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~ 340 (793)
|++.--+.+=|++.++|+.|+++|++++.+|.-...+...++.+
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 77778888999999999999999999999999988888755544
No 189
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=51.38 E-value=47 Score=31.82 Aligned_cols=28 Identities=18% Similarity=0.230 Sum_probs=22.4
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchh
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKME 332 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ 332 (793)
+++-+++.|..=+..|=++..+||+.+-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~g 142 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPG 142 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 3445577888888899999999999763
No 190
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=51.23 E-value=82 Score=30.39 Aligned_cols=34 Identities=12% Similarity=0.097 Sum_probs=25.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhccCccccc
Q 003824 662 TYFTYIQHLFIWGGITFWYIFLLAYGAMDPYIST 695 (793)
Q Consensus 662 ~~~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~ 695 (793)
+.|+|-......+++++|+++.++..++|.+++.
T Consensus 158 r~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN~ 191 (226)
T COG4858 158 RPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLNP 191 (226)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCCc
Confidence 4466666667788999999988888888876544
No 191
>PF02261 Asp_decarbox: Aspartate decarboxylase; InterPro: IPR003190 Decarboxylation of aspartate is the major route of alanine production in bacteria, and is catalysed by the enzyme aspartate decarboxylase. The enzyme is translated as an inactive proenzyme of two chains, A and B. This family contains both chains of aspartate decarboxylase.; GO: 0004068 aspartate 1-decarboxylase activity, 0006523 alanine biosynthetic process; PDB: 1PYU_C 1AW8_A 1PYQ_B 3TM7_C 1PT1_A 1PQH_A 1PPY_B 1PT0_B 1PQF_A 1PQE_A ....
Probab=49.54 E-value=24 Score=31.32 Aligned_cols=83 Identities=22% Similarity=0.398 Sum_probs=53.6
Q ss_pred eeeecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEe
Q 003824 133 ISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSK 212 (793)
Q Consensus 133 ~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~K 212 (793)
+.|.|+=..+..|+++|.= ..|+.+.+..-++.-+..+.++..+.|.-.+..-
T Consensus 20 L~Y~GSitID~~Ll~aagi---------------------------~p~E~V~V~Nv~nG~Rf~TYvI~g~~GSg~I~lN 72 (116)
T PF02261_consen 20 LNYEGSITIDEDLLDAAGI---------------------------LPYEQVQVVNVNNGERFETYVIPGERGSGVICLN 72 (116)
T ss_dssp TTSTSCEEEEHHHHHHCT-----------------------------TTBEEEEEETTT--EEEEEEEEESTTTT-EEEE
T ss_pred cccceeeEECHHHHHHcCC---------------------------CcCCEEEEEECCCCcEEEEEEEEccCCCcEEEEC
Confidence 4566666677888887642 3455555666667777777788877666566777
Q ss_pred cCchHhHHHHhhcchhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHH
Q 003824 213 GADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFN 264 (793)
Q Consensus 213 Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~ 264 (793)
||.... .+.|=+++.+||..++++|...|.
T Consensus 73 GaAArl----------------------~~~GD~vII~sy~~~~~~e~~~~~ 102 (116)
T PF02261_consen 73 GAAARL----------------------VQVGDRVIIMSYAQVDEEEAKNHK 102 (116)
T ss_dssp GGGGGC----------------------S-TT-EEEEEEEEEEEHHHHHH--
T ss_pred CHHHhc----------------------cCCCCEEEEEEcccCCHHHHhhCC
Confidence 876332 456789999999999999876654
No 192
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=48.27 E-value=67 Score=28.62 Aligned_cols=80 Identities=16% Similarity=0.249 Sum_probs=55.6
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHH
Q 003824 239 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 318 (793)
Q Consensus 239 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~ 318 (793)
-+...|++|+.+. ..++.+++.+ .-.+.+-.++|+....+.--+.+++.++.+++
T Consensus 22 ~l~~~G~~V~~lg-~~~~~~~l~~------------------------~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~ 76 (119)
T cd02067 22 ALRDAGFEVIDLG-VDVPPEEIVE------------------------AAKEEDADAIGLSGLLTTHMTLMKEVIEELKE 76 (119)
T ss_pred HHHHCCCEEEECC-CCCCHHHHHH------------------------HHHHcCCCEEEEeccccccHHHHHHHHHHHHH
Confidence 4567999998877 3355554322 12246778889888877777899999999999
Q ss_pred cCC-eE-EEEeCCchhhHHHHHHHcCc
Q 003824 319 AGI-KL-WVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 319 agI-kv-~mlTGD~~~ta~~ia~~~gi 343 (793)
.+- ++ +++-|-....-...+++.|.
T Consensus 77 ~~~~~~~i~vGG~~~~~~~~~~~~~G~ 103 (119)
T cd02067 77 AGLDDIPVLVGGAIVTRDFKFLKEIGV 103 (119)
T ss_pred cCCCCCeEEEECCCCChhHHHHHHcCC
Confidence 976 44 56666554433456777775
No 193
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=48.03 E-value=2e+02 Score=35.97 Aligned_cols=42 Identities=19% Similarity=0.239 Sum_probs=34.6
Q ss_pred hccChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Q 003824 705 CAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWF 747 (793)
Q Consensus 705 ~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~~p~~~~i~~e~ 747 (793)
...++.+|+.++++.++++++.++.......|.|.+.. .++.
T Consensus 850 ~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~-~~~~ 891 (917)
T COG0474 850 LFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLS-LFEW 891 (917)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCc-HHHH
Confidence 35789999999999999999999888887888888777 5543
No 194
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=47.94 E-value=55 Score=29.53 Aligned_cols=80 Identities=19% Similarity=0.237 Sum_probs=56.3
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHH
Q 003824 239 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 318 (793)
Q Consensus 239 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~ 318 (793)
-+...|++|+.++.. ++.++..+ .-.+.+-.++++-+......+.+++.++.|++
T Consensus 22 ~l~~~G~~vi~lG~~-vp~e~~~~------------------------~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~ 76 (122)
T cd02071 22 ALRDAGFEVIYTGLR-QTPEEIVE------------------------AAIQEDVDVIGLSSLSGGHMTLFPEVIELLRE 76 (122)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHH------------------------HHHHcCCCEEEEcccchhhHHHHHHHHHHHHh
Confidence 467899999998854 44433211 22246777888888888888899999999999
Q ss_pred cCC-e-EEEEeCCchhhHHHHHHHcCc
Q 003824 319 AGI-K-LWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 319 agI-k-v~mlTGD~~~ta~~ia~~~gi 343 (793)
+|. + .+++-|..+..-..-.++.|+
T Consensus 77 ~~~~~i~i~~GG~~~~~~~~~~~~~G~ 103 (122)
T cd02071 77 LGAGDILVVGGGIIPPEDYELLKEMGV 103 (122)
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHCCC
Confidence 977 4 356666655444556668886
No 195
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=43.01 E-value=33 Score=30.73 Aligned_cols=39 Identities=26% Similarity=0.514 Sum_probs=29.9
Q ss_pred cCCChHHHHHHHHHcCC-eEEEEeCCchhhHHHHHHHcCc
Q 003824 305 LQNGVPECIDKLAQAGI-KLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 305 lr~~v~~~I~~L~~agI-kv~mlTGD~~~ta~~ia~~~gi 343 (793)
..+.+++.++++.+.|+ .+|+.+|...+.+...|++.|+
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 45578999999999999 5999999999999999999887
No 196
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=42.10 E-value=73 Score=29.41 Aligned_cols=80 Identities=14% Similarity=0.131 Sum_probs=54.0
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHH
Q 003824 239 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 318 (793)
Q Consensus 239 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~ 318 (793)
-+...|++|+-++...-+++ +- ..-.|.+-..+|+-++-=.--+..+++++.|++
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~-~v------------------------~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~ 78 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEE-FI------------------------KAAIETKADAILVSSLYGHGEIDCKGLRQKCDE 78 (134)
T ss_pred HHHHCCCEEEECCCCCCHHH-HH------------------------HHHHHcCCCEEEEecccccCHHHHHHHHHHHHH
Confidence 35679999999885443332 21 122346788888888776666678999999999
Q ss_pred cCC--eEEEEeCCch------hhHHHHHHHcCc
Q 003824 319 AGI--KLWVLTGDKM------ETAINIGFACSL 343 (793)
Q Consensus 319 agI--kv~mlTGD~~------~ta~~ia~~~gi 343 (793)
+|+ .+|++-|-.. ..-..-++++|+
T Consensus 79 ~gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv 111 (134)
T TIGR01501 79 AGLEGILLYVGGNLVVGKQDFPDVEKRFKEMGF 111 (134)
T ss_pred CCCCCCEEEecCCcCcChhhhHHHHHHHHHcCC
Confidence 997 5677777421 122345788885
No 197
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=40.54 E-value=44 Score=31.93 Aligned_cols=33 Identities=6% Similarity=-0.009 Sum_probs=22.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.||+.++++ ++.++|.-+......+....|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l 122 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGL 122 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCC
Confidence 47889999988 3566776666555555555554
No 198
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=38.62 E-value=2e+02 Score=35.82 Aligned_cols=20 Identities=15% Similarity=0.036 Sum_probs=11.5
Q ss_pred cChHHHHHHHHHHHHHHHHH
Q 003824 707 PAPSFWLITLLVLMSSLLPY 726 (793)
Q Consensus 707 ~s~~~wl~~l~~~~~~ll~~ 726 (793)
.++.+|+.+++..++.++..
T Consensus 821 ~n~~~~~~~~~~~~~~~~~~ 840 (884)
T TIGR01522 821 SNRMFNYAVGGSIIGQLLVI 840 (884)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 56667766666555544333
No 199
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=38.38 E-value=53 Score=31.67 Aligned_cols=41 Identities=27% Similarity=0.291 Sum_probs=31.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEe-CCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLT-GDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlT-GD~~~ta~~ia~~~gi~ 344 (793)
.+-++|++.++.|++.|+++.++| -+.++.|..+-+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 477999999999999999999999 58899999999998886
No 200
>PLN03140 ABC transporter G family member; Provisional
Probab=37.82 E-value=7.8e+02 Score=32.68 Aligned_cols=12 Identities=17% Similarity=0.556 Sum_probs=7.1
Q ss_pred hhcchhhhhccc
Q 003824 582 LKFPLLYQEGVQ 593 (793)
Q Consensus 582 ~~~P~ly~~~~~ 593 (793)
.+.|-+|+....
T Consensus 594 ~~r~vf~ker~~ 605 (1470)
T PLN03140 594 QRLPVFYKQRDL 605 (1470)
T ss_pred hccchhHHhhhc
Confidence 366777765543
No 201
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=37.47 E-value=16 Score=35.55 Aligned_cols=31 Identities=32% Similarity=0.439 Sum_probs=25.2
Q ss_pred hHHHHHHHH-----HhcCCCeEEEEcCCccChhhhh
Q 003824 441 QKALVTRLV-----KTKTSSTTLAIGDGANDVGMLQ 471 (793)
Q Consensus 441 qK~~iv~~l-----k~~~~~~vlaiGDG~ND~~ml~ 471 (793)
.|...++.+ +......++++|||.||.+|||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 488888888 1125789999999999999997
No 202
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=36.69 E-value=3.1e+02 Score=24.54 Aligned_cols=96 Identities=14% Similarity=0.076 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChH
Q 003824 231 EQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVP 310 (793)
Q Consensus 231 ~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~ 310 (793)
....+.++.+..+|+++.+++-+........ | .+.++...+.+ ++.+...+......+|...
T Consensus 28 ~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~-~---------------~~~~~~~l~~~--~l~~~~~~~~~~~~KP~~~ 89 (132)
T TIGR01662 28 PEVPDALAELKEAGYKVVIVTNQSGIGRGKF-S---------------SGRVARRLEEL--GVPIDVLYACPHCRKPKPG 89 (132)
T ss_pred CCHHHHHHHHHHCCCEEEEEECCccccccHH-H---------------HHHHHHHHHHC--CCCEEEEEECCCCCCCChH
Confidence 3455677888889999888875432111000 0 11111122222 2222222211123344332
Q ss_pred HHHHHHHHc-CCe--EEEEeCCchhhHHHHHHHcCcc
Q 003824 311 ECIDKLAQA-GIK--LWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 311 ~~I~~L~~a-gIk--v~mlTGD~~~ta~~ia~~~gi~ 344 (793)
-....+++. ++. =.+.=||+...-+..|+.+|+.
T Consensus 90 ~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 90 MFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 333444454 463 3666799777888999999974
No 203
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=36.68 E-value=53 Score=31.18 Aligned_cols=44 Identities=16% Similarity=-0.012 Sum_probs=37.9
Q ss_pred eeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 300 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 300 ~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
...=++|||+.+.++.|++. +++.+.|.-....|..+.+.++.-
T Consensus 54 ~~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 54 WYLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34446899999999999955 999999999999999999888754
No 204
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=36.61 E-value=55 Score=33.38 Aligned_cols=47 Identities=19% Similarity=0.178 Sum_probs=33.8
Q ss_pred EEEeeecccCCChHHHHHHHHHcCCeEEEEe---CCchhhHHHHHHH-cCc
Q 003824 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFA-CSL 343 (793)
Q Consensus 297 G~~~ieD~lr~~v~~~I~~L~~agIkv~mlT---GD~~~ta~~ia~~-~gi 343 (793)
|++.-.+.+=+++.++|+.++++|++++++| |.........-.+ .|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 4444456667799999999999999999999 5555544443344 555
No 205
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=35.13 E-value=9.4e+02 Score=29.57 Aligned_cols=44 Identities=14% Similarity=0.000 Sum_probs=32.1
Q ss_pred cCCChHHHHHHHHHc-CCeEEEEeCCchhhHHHHHHH--cCccccCc
Q 003824 305 LQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGFA--CSLLRQGM 348 (793)
Q Consensus 305 lr~~v~~~I~~L~~a-gIkv~mlTGD~~~ta~~ia~~--~gi~~~~~ 348 (793)
+-+++.++++.|.+. +-.|+|+||+...+....... +++....+
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~l~aeHG 579 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENG 579 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCCcEEEeCC
Confidence 455777888888765 678999999999888877754 33444443
No 206
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=35.01 E-value=79 Score=27.88 Aligned_cols=83 Identities=22% Similarity=0.374 Sum_probs=56.7
Q ss_pred CceeeecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEE
Q 003824 131 GKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLL 210 (793)
Q Consensus 131 ~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 210 (793)
..+.|.|+=..+..|+++|. + ..|+.+.+..-+...+..+.+++.+.|.-.+.
T Consensus 17 a~L~YeGSitID~~Ll~aag---i------------------------~~~E~V~I~Nv~NG~Rf~TYvI~g~~gSg~I~ 69 (111)
T cd06919 17 ADLNYEGSITIDEDLLEAAG---I------------------------LPYEKVLVVNVNNGARFETYVIPGERGSGVIC 69 (111)
T ss_pred cccccceeEEECHHHHHhcC---C------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 34678887778888888763 2 33444555555566666666777665655666
Q ss_pred EecCchHhHHHHhhcchhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHH
Q 003824 211 SKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQ 262 (793)
Q Consensus 211 ~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~ 262 (793)
.-||.- .+.+.|=|++..||-.++++|...
T Consensus 70 lNGAAA----------------------r~~~~GD~vII~sy~~~~~~e~~~ 99 (111)
T cd06919 70 LNGAAA----------------------RLGQPGDRVIIMAYALMDEEEAEG 99 (111)
T ss_pred eCCHHH----------------------hcCCCCCEEEEEECccCCHHHHhc
Confidence 667652 235678899999999999987644
No 207
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=34.33 E-value=4.8e+02 Score=33.03 Aligned_cols=30 Identities=27% Similarity=0.286 Sum_probs=20.4
Q ss_pred hhhhhhcceeEEeccC--CcccccccCCeeec
Q 003824 467 VGMLQEADIGVGISGV--EGMQAVMSSDIAIA 496 (793)
Q Consensus 467 ~~ml~~AdvGI~i~g~--~~~~a~~~aD~~i~ 496 (793)
+.++|..+-=++|.|. .+..|...||+-+.
T Consensus 676 V~~lq~~g~vv~~~GDG~ND~paLk~AdVGia 707 (997)
T TIGR01106 676 VEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 707 (997)
T ss_pred HHHHHHCCCEEEEECCCcccHHHHhhCCccee
Confidence 6677777665777553 33347788998884
No 208
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=33.64 E-value=3.6e+02 Score=33.92 Aligned_cols=30 Identities=23% Similarity=0.328 Sum_probs=20.5
Q ss_pred hhhhhhcceeEEeccC--CcccccccCCeeec
Q 003824 467 VGMLQEADIGVGISGV--EGMQAVMSSDIAIA 496 (793)
Q Consensus 467 ~~ml~~AdvGI~i~g~--~~~~a~~~aD~~i~ 496 (793)
+.++|+.+-=|+|.|. .+..|-.+||+-+.
T Consensus 661 V~~lq~~g~vVam~GDGvNDapALk~AdVGIA 692 (941)
T TIGR01517 661 VLMLKDMGEVVAVTGDGTNDAPALKLADVGFS 692 (941)
T ss_pred HHHHHHCCCEEEEECCCCchHHHHHhCCccee
Confidence 6677777666788653 33347788988874
No 209
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=33.05 E-value=1.8e+02 Score=25.31 Aligned_cols=62 Identities=15% Similarity=0.225 Sum_probs=33.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003824 665 TYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQM 734 (793)
Q Consensus 665 ~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~ 734 (793)
+.+....+++++...++.-++...+- +. .+...+.+...|.+++++.-++....-++.++.+
T Consensus 37 ~~~~~l~~~g~IG~~~v~pil~G~~l---G~-----WLD~~~~t~~~~tl~~lllGv~~G~~n~w~wi~r 98 (100)
T TIGR02230 37 SIWEGLGMFGLIGWSVAIPTLLGVAV---GI-----WLDRHYPSPFSWTLTMLIVGVVIGCLNAWHWVSR 98 (100)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH---HH-----HHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34555566666666555544433221 11 3334444444676666666666666666666654
No 210
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=32.87 E-value=84 Score=28.36 Aligned_cols=84 Identities=13% Similarity=0.278 Sum_probs=57.3
Q ss_pred CceeeecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEE
Q 003824 131 GKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLL 210 (793)
Q Consensus 131 ~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 210 (793)
..+.|.|+=..+..|+++|.= ..|+.+.+..-+...+.-+.++..+.|.-.+.
T Consensus 18 a~L~Y~GSItID~~Lm~aagi---------------------------~p~E~V~V~Nv~NG~Rf~TYvI~G~~GSg~I~ 70 (126)
T TIGR00223 18 ANLNYEGSITIDEDLLDAAGI---------------------------LENEKVDIVNVNNGKRFSTYAIAGKRGSRIIC 70 (126)
T ss_pred cccccceeEEECHHHHHhcCC---------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 346788877788889887632 33444555555566666666777665555666
Q ss_pred EecCchHhHHHHhhcchhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHH
Q 003824 211 SKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQF 263 (793)
Q Consensus 211 ~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~ 263 (793)
.-||.- .+.+.|=|++..||-.++++|...|
T Consensus 71 lNGAAA----------------------rl~~~GD~VII~sy~~~~~~e~~~~ 101 (126)
T TIGR00223 71 VNGAAA----------------------RCVSVGDIVIIASYVTMPDEEARTH 101 (126)
T ss_pred eCCHHH----------------------hcCCCCCEEEEEECCcCCHHHHhcC
Confidence 667642 2356788999999999999886544
No 211
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=32.66 E-value=89 Score=28.25 Aligned_cols=84 Identities=19% Similarity=0.327 Sum_probs=57.7
Q ss_pred CceeeecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEE
Q 003824 131 GKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLL 210 (793)
Q Consensus 131 ~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 210 (793)
..+.|.|+=..+..|+++|. + ..|+.+.+..-+...+..+.++..+.|.-.+.
T Consensus 18 a~L~Y~GSitID~~Ll~aag---i------------------------~p~E~V~V~Nv~NG~Rf~TYvI~g~~GSg~I~ 70 (126)
T PRK05449 18 ADLNYEGSITIDEDLLDAAG---I------------------------LENEKVQIVNVNNGARFETYVIAGERGSGVIC 70 (126)
T ss_pred cccccceeEEECHHHHHhcC---C------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 34678887778888988763 2 33444555555566666666777666665666
Q ss_pred EecCchHhHHHHhhcchhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHH
Q 003824 211 SKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQF 263 (793)
Q Consensus 211 ~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~ 263 (793)
..||.- .+.+.|=|++..||-.++++|...|
T Consensus 71 lNGAAA----------------------r~~~~GD~vII~ay~~~~~~e~~~~ 101 (126)
T PRK05449 71 LNGAAA----------------------RLVQVGDLVIIAAYAQMDEEEAKTH 101 (126)
T ss_pred eCCHHH----------------------hcCCCCCEEEEEECccCCHHHHhcC
Confidence 677652 2356788999999999999886544
No 212
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=32.29 E-value=1.1e+02 Score=26.18 Aligned_cols=22 Identities=9% Similarity=0.039 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHhccCcc
Q 003824 671 FIWGGITFWYIFLLAYGAMDPY 692 (793)
Q Consensus 671 ~i~~si~~~~i~~~i~~~i~~~ 692 (793)
.....++.++.+.++..+.|..
T Consensus 21 l~~i~l~~y~~~~ll~a~~p~~ 42 (91)
T PF04341_consen 21 LSAIFLVLYFGFVLLSAFAPEL 42 (91)
T ss_pred HHHHHHHHHHHHHHHHHHCHHH
Confidence 3444555666666666666653
No 213
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=31.37 E-value=3.7e+02 Score=27.11 Aligned_cols=128 Identities=15% Similarity=0.190 Sum_probs=74.5
Q ss_pred EEeeecccCCCh--HHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHH
Q 003824 298 ATAVEDKLQNGV--PECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAA 375 (793)
Q Consensus 298 ~~~ieD~lr~~v--~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 375 (793)
-.-++| |+|+- ++.+-.|++.+ -|+.|.-...-|..+-+.+||..-=..++.+.-.++.
T Consensus 93 ~LPlq~-LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~---------------- 153 (244)
T KOG3109|consen 93 RLPLQD-LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI---------------- 153 (244)
T ss_pred cCcHhh-cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC----------------
Confidence 344555 66664 45555555544 8999999999999999999996432223222222110
Q ss_pred HHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCC
Q 003824 376 LKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSS 455 (793)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~ 455 (793)
+..++|.-+|+-=-...+...-....
T Consensus 154 ------------------------------------------------------~~~~vcKP~~~afE~a~k~agi~~p~ 179 (244)
T KOG3109|consen 154 ------------------------------------------------------EKTVVCKPSEEAFEKAMKVAGIDSPR 179 (244)
T ss_pred ------------------------------------------------------CCceeecCCHHHHHHHHHHhCCCCcC
Confidence 11267776666433333322211246
Q ss_pred eEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchhh
Q 003824 456 TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF 500 (793)
Q Consensus 456 ~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~ 500 (793)
.+.++-|+.+.+..=++-+.+=-+.|.+.. ...+|+++.+...
T Consensus 180 ~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~--~~~~d~~l~~ih~ 222 (244)
T KOG3109|consen 180 NTYFFDDSERNIQTAKEVGLKTVLVGREHK--IKGVDYALEQIHN 222 (244)
T ss_pred ceEEEcCchhhHHHHHhccceeEEEEeeec--ccchHHHHHHhhc
Confidence 899999999998766665544333444442 2567777666333
No 214
>PRK10053 hypothetical protein; Provisional
Probab=31.16 E-value=27 Score=31.90 Aligned_cols=27 Identities=22% Similarity=0.374 Sum_probs=21.5
Q ss_pred ceeccCCchhhccCceEEEecCCcccc
Q 003824 10 ARARTSNLNEELGQVDTILSDKTGTLT 36 (793)
Q Consensus 10 ~~~r~~~~~E~Lg~v~~i~sDKTGTLT 36 (793)
-.+=..+++..||.=+|+|.|+|||++
T Consensus 63 ~V~L~G~Iv~~lg~d~Y~F~D~tG~I~ 89 (130)
T PRK10053 63 TVSLRGNLIDHKGDDRYVFRDKSGEIN 89 (130)
T ss_pred eEEEEEEEEEEeCCceEEEECCCCcEE
Confidence 334456788899999999999999863
No 215
>PRK10444 UMP phosphatase; Provisional
Probab=30.78 E-value=4.1e+02 Score=27.28 Aligned_cols=48 Identities=19% Similarity=0.194 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCc-cChhhhhhcceeE-Ee-ccCCcccc----cccCCeeecchhh
Q 003824 453 TSSTTLAIGDGA-NDVGMLQEADIGV-GI-SGVEGMQA----VMSSDIAIAQFRF 500 (793)
Q Consensus 453 ~~~~vlaiGDG~-ND~~ml~~AdvGI-~i-~g~~~~~a----~~~aD~~i~~f~~ 500 (793)
..+.++||||.. +|+.+=+.|++-- .+ +|....+. ....|+++.+...
T Consensus 190 ~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~e 244 (248)
T PRK10444 190 HSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVAD 244 (248)
T ss_pred CcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHH
Confidence 357899999997 8999999998854 33 33222111 2346777766543
No 216
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=29.43 E-value=5.4e+02 Score=25.55 Aligned_cols=9 Identities=0% Similarity=0.098 Sum_probs=4.3
Q ss_pred HHHHHHHHh
Q 003824 728 TYSAIQMRF 736 (793)
Q Consensus 728 i~k~~~~~~ 736 (793)
+..+++++|
T Consensus 193 ~~~~lkkk~ 201 (206)
T PF06570_consen 193 LRFYLKKKY 201 (206)
T ss_pred HHHHHHHHh
Confidence 334555544
No 217
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=28.82 E-value=83 Score=30.01 Aligned_cols=43 Identities=16% Similarity=0.021 Sum_probs=37.7
Q ss_pred eeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 300 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 300 ~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
.+.=..|||+.+.++.|.+. ..+++.|.-....|..+...++.
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCc
Confidence 44446999999999999987 99999999999999999987774
No 218
>PLN03140 ABC transporter G family member; Provisional
Probab=28.50 E-value=1.3e+03 Score=30.54 Aligned_cols=18 Identities=17% Similarity=0.226 Sum_probs=8.0
Q ss_pred hcchhhhhccccccchhHH
Q 003824 583 KFPLLYQEGVQNILFSWTR 601 (793)
Q Consensus 583 ~~P~ly~~~~~~~~~~~~~ 601 (793)
.++-.|+. +....+++..
T Consensus 1273 eR~vf~RE-r~~~~Y~~~~ 1290 (1470)
T PLN03140 1273 ERTVFYRE-RAAGMYSALP 1290 (1470)
T ss_pred HHHHHHHH-HhcCCcCHHH
Confidence 33444433 3344555544
No 219
>PRK08508 biotin synthase; Provisional
Probab=28.25 E-value=4e+02 Score=27.88 Aligned_cols=38 Identities=21% Similarity=0.097 Sum_probs=26.4
Q ss_pred hHHHHHHHHHcCCe-EE------------EEeCCchhh---HHHHHHHcCcccc
Q 003824 309 VPECIDKLAQAGIK-LW------------VLTGDKMET---AINIGFACSLLRQ 346 (793)
Q Consensus 309 v~~~I~~L~~agIk-v~------------mlTGD~~~t---a~~ia~~~gi~~~ 346 (793)
.++.++.|+++|+. +- +.||...+. ++..|+++|+-..
T Consensus 101 ~~e~l~~Lk~aGld~~~~~lEt~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~ 154 (279)
T PRK08508 101 SVEQLKELKKAGIFSYNHNLETSKEFFPKICTTHTWEERFQTCENAKEAGLGLC 154 (279)
T ss_pred CHHHHHHHHHcCCCEEcccccchHHHhcCCCCCCCHHHHHHHHHHHHHcCCeec
Confidence 58999999999983 33 456665555 4456888887433
No 220
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=27.78 E-value=2.7e+02 Score=29.14 Aligned_cols=42 Identities=14% Similarity=0.260 Sum_probs=36.1
Q ss_pred cCceEEEEEeeecccCCChHHHHHHHHHcCCe-EEEEeCCchh
Q 003824 291 KNLILLGATAVEDKLQNGVPECIDKLAQAGIK-LWVLTGDKME 332 (793)
Q Consensus 291 ~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIk-v~mlTGD~~~ 332 (793)
.++..+--+...|.-+.+..+.+..++++||+ +..+|||...
T Consensus 57 ~g~~~i~Hlt~r~~n~~~l~~~L~~~~~~Gi~nvL~l~GD~~~ 99 (272)
T TIGR00676 57 TGIPTVPHLTCIGATREEIREILREYRELGIRHILALRGDPPK 99 (272)
T ss_pred cCCCeeEEeeecCCCHHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 47888888888898888899999999999996 6669999874
No 221
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=27.76 E-value=1.3e+02 Score=29.68 Aligned_cols=78 Identities=15% Similarity=0.224 Sum_probs=55.3
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHH
Q 003824 239 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 318 (793)
Q Consensus 239 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~ 318 (793)
-+...|++|+.++ ..++.+++.+ .-.+.+-.++|+-+.-..--+.+++.|+.|++
T Consensus 107 ~l~~~G~~vi~LG-~~vp~e~~v~------------------------~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~ 161 (197)
T TIGR02370 107 MLRANGFDVIDLG-RDVPIDTVVE------------------------KVKKEKPLMLTGSALMTTTMYGQKDINDKLKE 161 (197)
T ss_pred HHHhCCcEEEECC-CCCCHHHHHH------------------------HHHHcCCCEEEEccccccCHHHHHHHHHHHHH
Confidence 4567899999988 3444443321 12236778899998888888899999999999
Q ss_pred cCCe---EEEEeCCchhhHHHHHHHcCc
Q 003824 319 AGIK---LWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 319 agIk---v~mlTGD~~~ta~~ia~~~gi 343 (793)
.|.+ .+++-|... + ...|++.|-
T Consensus 162 ~~~~~~v~i~vGG~~~-~-~~~~~~~ga 187 (197)
T TIGR02370 162 EGYRDSVKFMVGGAPV-T-QDWADKIGA 187 (197)
T ss_pred cCCCCCCEEEEEChhc-C-HHHHHHhCC
Confidence 9874 456666544 3 356777764
No 222
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=27.76 E-value=6.7e+02 Score=30.92 Aligned_cols=30 Identities=27% Similarity=0.610 Sum_probs=18.9
Q ss_pred cccCcccchhHHHHHHHHhhccccceeeecc
Q 003824 542 SFSGQPVYNDWFLSLYNVFFTSLPVIALGVF 572 (793)
Q Consensus 542 ~~s~~~~~~~~~~l~~n~~~~~lp~l~l~~~ 572 (793)
+|||-.++......|.+.+. .+|.+.+|++
T Consensus 131 afsg~~~~~~~~~~fld~~i-~lPL~llgie 160 (843)
T PF09586_consen 131 AFSGYVIYYSFNIMFLDAMI-LLPLLLLGIE 160 (843)
T ss_pred HHHHHHHHHhhhHHHHHHHH-HHHHHHHHHH
Confidence 34444444455566666644 6899999874
No 223
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=27.51 E-value=1.4e+02 Score=27.44 Aligned_cols=80 Identities=16% Similarity=0.187 Sum_probs=56.4
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHH
Q 003824 239 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 318 (793)
Q Consensus 239 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~ 318 (793)
-|...|+.|+-.... .+.+++ +..-.|.+-..+|+-++-..-.+.+++.++.|++
T Consensus 25 ~l~~~GfeVi~lg~~-~s~e~~------------------------v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~ 79 (132)
T TIGR00640 25 AYADLGFDVDVGPLF-QTPEEI------------------------ARQAVEADVHVVGVSSLAGGHLTLVPALRKELDK 79 (132)
T ss_pred HHHhCCcEEEECCCC-CCHHHH------------------------HHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHh
Confidence 467899999987754 333332 1233457889999999999899999999999999
Q ss_pred cCC-eE-EEEeCCchhhHHHHHHHcCc
Q 003824 319 AGI-KL-WVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 319 agI-kv-~mlTGD~~~ta~~ia~~~gi 343 (793)
+|. .+ +++-|-.+..-..-.+++|+
T Consensus 80 ~g~~~i~vivGG~~~~~~~~~l~~~Gv 106 (132)
T TIGR00640 80 LGRPDILVVVGGVIPPQDFDELKEMGV 106 (132)
T ss_pred cCCCCCEEEEeCCCChHhHHHHHHCCC
Confidence 987 44 45544444433555677787
No 224
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=26.98 E-value=1.4e+02 Score=29.64 Aligned_cols=78 Identities=21% Similarity=0.320 Sum_probs=54.9
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHH
Q 003824 239 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 318 (793)
Q Consensus 239 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~ 318 (793)
-+...|++|+-++ ..++.+++.+ .-.+.+-.++|+.+.-..--+.+++.|+.|++
T Consensus 105 ~l~~~G~~vi~lG-~~~p~~~l~~------------------------~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~ 159 (201)
T cd02070 105 MLEANGFEVIDLG-RDVPPEEFVE------------------------AVKEHKPDILGLSALMTTTMGGMKEVIEALKE 159 (201)
T ss_pred HHHHCCCEEEECC-CCCCHHHHHH------------------------HHHHcCCCEEEEeccccccHHHHHHHHHHHHH
Confidence 4578999998777 5555554322 12236788999998888888899999999999
Q ss_pred cCC--eE-EEEeCCchhhHHHHHHHcCc
Q 003824 319 AGI--KL-WVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 319 agI--kv-~mlTGD~~~ta~~ia~~~gi 343 (793)
.+. ++ +++=|- .-+. ..+...|-
T Consensus 160 ~~~~~~~~i~vGG~-~~~~-~~~~~~Ga 185 (201)
T cd02070 160 AGLRDKVKVMVGGA-PVNQ-EFADEIGA 185 (201)
T ss_pred CCCCcCCeEEEECC-cCCH-HHHHHcCC
Confidence 987 65 445554 4333 47777764
No 225
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=26.67 E-value=82 Score=31.58 Aligned_cols=79 Identities=18% Similarity=0.192 Sum_probs=53.3
Q ss_pred HHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHc
Q 003824 240 YADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQA 319 (793)
Q Consensus 240 ~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~a 319 (793)
+...|++++=++ ++++.+++-+- -.|.+-.+++..++--.--.+.++.|+.|++.
T Consensus 128 l~~aGfevidLG-~dvP~e~fve~------------------------a~e~k~d~v~~SalMTttm~~~~~viE~L~ee 182 (227)
T COG5012 128 LEAAGFEVIDLG-RDVPVEEFVEK------------------------AKELKPDLVSMSALMTTTMIGMKDVIELLKEE 182 (227)
T ss_pred HHhCCcEEEecC-CCCCHHHHHHH------------------------HHHcCCcEEechHHHHHHHHHHHHHHHHHHHc
Confidence 456799999988 45555544321 11345677888887766667799999999999
Q ss_pred CCeEEEEeC-CchhhHHHHHHHcCc
Q 003824 320 GIKLWVLTG-DKMETAINIGFACSL 343 (793)
Q Consensus 320 gIkv~mlTG-D~~~ta~~ia~~~gi 343 (793)
|+|--+++| --.......|.+.|.
T Consensus 183 GiRd~v~v~vGGApvtq~~a~~iGA 207 (227)
T COG5012 183 GIRDKVIVMVGGAPVTQDWADKIGA 207 (227)
T ss_pred CCccCeEEeecCccccHHHHHHhCC
Confidence 998666665 333344556666664
No 226
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=26.19 E-value=58 Score=30.99 Aligned_cols=24 Identities=33% Similarity=0.648 Sum_probs=20.9
Q ss_pred CCChHHHHHHHHHcCCeEEEEeCC
Q 003824 306 QNGVPECIDKLAQAGIKLWVLTGD 329 (793)
Q Consensus 306 r~~v~~~I~~L~~agIkv~mlTGD 329 (793)
-++|+++|+.|++.|.+++|+|-.
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred chhHHHHHHHHHhcCCeEEEEeCc
Confidence 358999999999999999999975
No 227
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=25.75 E-value=1.9e+02 Score=26.67 Aligned_cols=80 Identities=15% Similarity=0.176 Sum_probs=54.7
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHH
Q 003824 239 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 318 (793)
Q Consensus 239 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~ 318 (793)
-+...|++|+.++... +.+++.+ .-.+.+-.++|+-..--...+.+++.++.|++
T Consensus 26 ~lr~~G~eVi~LG~~v-p~e~i~~------------------------~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~ 80 (137)
T PRK02261 26 ALTEAGFEVINLGVMT-SQEEFID------------------------AAIETDADAILVSSLYGHGEIDCRGLREKCIE 80 (137)
T ss_pred HHHHCCCEEEECCCCC-CHHHHHH------------------------HHHHcCCCEEEEcCccccCHHHHHHHHHHHHh
Confidence 4568999999998543 3333211 22346788888888888888899999999999
Q ss_pred cCC-e-EEEEeCCc------hhhHHHHHHHcCc
Q 003824 319 AGI-K-LWVLTGDK------METAINIGFACSL 343 (793)
Q Consensus 319 agI-k-v~mlTGD~------~~ta~~ia~~~gi 343 (793)
.|. . .|++-|-- ......-++++|+
T Consensus 81 ~~~~~~~i~vGG~~~~~~~~~~~~~~~l~~~G~ 113 (137)
T PRK02261 81 AGLGDILLYVGGNLVVGKHDFEEVEKKFKEMGF 113 (137)
T ss_pred cCCCCCeEEEECCCCCCccChHHHHHHHHHcCC
Confidence 955 2 35555543 2334466778884
No 228
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=25.31 E-value=98 Score=27.60 Aligned_cols=35 Identities=9% Similarity=0.186 Sum_probs=26.4
Q ss_pred CCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcC
Q 003824 306 QNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACS 342 (793)
Q Consensus 306 r~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~g 342 (793)
-+++.++++.+++.|++++.+|++.. ....+.+-|
T Consensus 56 t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~ 90 (119)
T cd05017 56 TEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHG 90 (119)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcC
Confidence 45788899999999999999999874 333454434
No 229
>PTZ00413 lipoate synthase; Provisional
Probab=25.05 E-value=5.1e+02 Score=28.57 Aligned_cols=55 Identities=24% Similarity=0.323 Sum_probs=38.6
Q ss_pred hhcCceEEEEEee-ecccCCC----hHHHHHHHHHc--CCeEEEEeCCc--hhhHHHHHHHcCc
Q 003824 289 IEKNLILLGATAV-EDKLQNG----VPECIDKLAQA--GIKLWVLTGDK--METAINIGFACSL 343 (793)
Q Consensus 289 ie~~l~~lG~~~i-eD~lr~~----v~~~I~~L~~a--gIkv~mlTGD~--~~ta~~ia~~~gi 343 (793)
-+.++.++=++.. .|.|.++ ..++|+.+++. ++.|.+++||- ...+...-.+.|+
T Consensus 190 ~~~Gl~~~VVTSv~RDDL~D~ga~~~a~~I~~Ir~~~p~~~IevligDf~g~~e~l~~L~eAG~ 253 (398)
T PTZ00413 190 AEMGVDYIVMTMVDRDDLPDGGASHVARCVELIKESNPELLLEALVGDFHGDLKSVEKLANSPL 253 (398)
T ss_pred HHcCCCEEEEEEEcCCCCChhhHHHHHHHHHHHHccCCCCeEEEcCCccccCHHHHHHHHhcCC
Confidence 3467777767766 5777664 57889999884 79999999987 3445555556665
No 230
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=24.96 E-value=5.6e+02 Score=24.97 Aligned_cols=39 Identities=15% Similarity=0.092 Sum_probs=27.0
Q ss_pred cCCChHHHHHHHHHcCCeE--EEEeCCchhhHHHHHHHcCcc
Q 003824 305 LQNGVPECIDKLAQAGIKL--WVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv--~mlTGD~~~ta~~ia~~~gi~ 344 (793)
.||...-..+.+++.|++. ++.=||+. .-+..|++.|+-
T Consensus 130 ~KP~~~~~~~~~~~~~~~~~~~l~igD~~-~Di~aA~~~Gi~ 170 (205)
T TIGR01454 130 PKPAPDIVREALRLLDVPPEDAVMVGDAV-TDLASARAAGTA 170 (205)
T ss_pred CCCChHHHHHHHHHcCCChhheEEEcCCH-HHHHHHHHcCCe
Confidence 4555444445566677754 67789985 678889999984
No 231
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes. ; GO: 0016021 integral to membrane
Probab=24.44 E-value=1.7e+02 Score=35.06 Aligned_cols=15 Identities=7% Similarity=0.521 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHHH
Q 003824 643 TTMYTCVVWVVNCQM 657 (793)
Q Consensus 643 t~~f~~~v~~~~~~~ 657 (793)
++.|+|+.++..+..
T Consensus 76 ~~~~~~~~~~~d~~~ 90 (697)
T PF09726_consen 76 SVFFVCIAFTSDLIC 90 (697)
T ss_pred HHHHHHHHHHHHHHH
Confidence 455555555544443
No 232
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=24.41 E-value=64 Score=31.60 Aligned_cols=29 Identities=24% Similarity=0.331 Sum_probs=23.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchh
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKME 332 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ 332 (793)
++-+|+.|++++|.+.|..++++|+....
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 56789999999999999999999988654
No 233
>TIGR00156 conserved hypothetical protein TIGR00156. As of the last revision, this family consists only of two proteins from Escherichia coli and one from the related species Haemophilus influenzae.
Probab=24.30 E-value=42 Score=30.48 Aligned_cols=26 Identities=19% Similarity=0.390 Sum_probs=20.7
Q ss_pred eeccCCchhhccCceEEEecCCcccc
Q 003824 11 RARTSNLNEELGQVDTILSDKTGTLT 36 (793)
Q Consensus 11 ~~r~~~~~E~Lg~v~~i~sDKTGTLT 36 (793)
..=..++++.||.=.|+|.|+|||++
T Consensus 60 V~L~G~Iv~~l~~d~Y~F~D~TG~I~ 85 (126)
T TIGR00156 60 VTLRGNIISHIGDDRYVFRDKSGEIN 85 (126)
T ss_pred EEEEEEEEEEeCCceEEEECCCCCEE
Confidence 33455688889998899999999864
No 234
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=24.05 E-value=1.8e+03 Score=29.27 Aligned_cols=41 Identities=10% Similarity=-0.083 Sum_probs=25.9
Q ss_pred CCChHHHHHHHHH-cCCeEEEEeCCchhhHHHHHHHcCcccc
Q 003824 306 QNGVPECIDKLAQ-AGIKLWVLTGDKMETAINIGFACSLLRQ 346 (793)
Q Consensus 306 r~~v~~~I~~L~~-agIkv~mlTGD~~~ta~~ia~~~gi~~~ 346 (793)
+..+.+.|+++.+ .|.-+++.|=|....+...+...=++.+
T Consensus 245 ~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~ 286 (1394)
T TIGR00956 245 ALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYE 286 (1394)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeC
Confidence 3445566777665 4777777777766666666666555544
No 235
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=23.58 E-value=1.1e+02 Score=31.20 Aligned_cols=23 Identities=22% Similarity=0.281 Sum_probs=18.9
Q ss_pred CeEEEEcCC-ccChhhhhhcceeE
Q 003824 455 STTLAIGDG-ANDVGMLQEADIGV 477 (793)
Q Consensus 455 ~~vlaiGDG-~ND~~ml~~AdvGI 477 (793)
..++||||. .+|+.+=+.|++-.
T Consensus 214 ~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 214 NRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred ccEEEECCCcHHHHHHHHHCCCeE
Confidence 479999999 59999888877643
No 236
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=23.53 E-value=5.2e+02 Score=22.89 Aligned_cols=30 Identities=13% Similarity=0.148 Sum_probs=24.3
Q ss_pred CChHHHHHHHHHcCCeEEEEeCCchhhHHH
Q 003824 307 NGVPECIDKLAQAGIKLWVLTGDKMETAIN 336 (793)
Q Consensus 307 ~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ 336 (793)
+++.+.++.+++.|++++.+|++.......
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~~~l~~ 103 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSANSPLAK 103 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCChhHH
Confidence 467888999999999999999987644333
No 237
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=23.44 E-value=2.1e+02 Score=24.33 Aligned_cols=29 Identities=21% Similarity=0.344 Sum_probs=21.8
Q ss_pred EEeeecccCCChHHHHHHHHHcCCe-EEEE
Q 003824 298 ATAVEDKLQNGVPECIDKLAQAGIK-LWVL 326 (793)
Q Consensus 298 ~~~ieD~lr~~v~~~I~~L~~agIk-v~ml 326 (793)
.+++.....|.+.++++.|++.|++ |+++
T Consensus 36 ~~a~~~~~~P~i~~~l~~l~~~g~~~vvvv 65 (101)
T cd03409 36 YVGFQSGLGPDTEEAIRELAEEGYQRVVIV 65 (101)
T ss_pred EEEEECCCCCCHHHHHHHHHHcCCCeEEEE
Confidence 3455555789999999999999984 4443
No 238
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=23.36 E-value=1.1e+02 Score=33.21 Aligned_cols=37 Identities=22% Similarity=0.221 Sum_probs=33.9
Q ss_pred CCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHc-C
Q 003824 306 QNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC-S 342 (793)
Q Consensus 306 r~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~-g 342 (793)
-|++++.++.|+++|+++.++|+-....+..+...+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 579999999999999999999999999998888875 5
No 239
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=23.30 E-value=1.4e+02 Score=31.34 Aligned_cols=47 Identities=17% Similarity=0.236 Sum_probs=38.9
Q ss_pred EEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHH---HcCc
Q 003824 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGF---ACSL 343 (793)
Q Consensus 297 G~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~---~~gi 343 (793)
|++...+.+-|+++|+++.|+..|-++.++|--+-.+-...++ ++|+
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~ 80 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGF 80 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCc
Confidence 8888899999999999999999999999999887666555543 4554
No 240
>PF03579 SHP: Small hydrophobic protein; InterPro: IPR005327 The small hydrophobic integral membrane protein, SH (previously designated 1A) is found to have a variety of glycosylated forms [, ]. This protein is a component of the mature respiratory syncytial virion [] where it may form complexes and appears to play a structural role.; GO: 0016020 membrane, 0016021 integral to membrane, 0048222 glycoprotein network
Probab=23.03 E-value=1.1e+02 Score=23.41 Aligned_cols=28 Identities=21% Similarity=0.516 Sum_probs=18.0
Q ss_pred HhcchhhHHHHHHHHHHHHHHHHHHHHh
Q 003824 660 SVTYFTYIQHLFIWGGITFWYIFLLAYG 687 (793)
Q Consensus 660 ~~~~~~~~~~~~i~~si~~~~i~~~i~~ 687 (793)
.++.|+.+..+.+...+++++++..++.
T Consensus 11 tskFW~YFtLi~M~lti~~~~Iv~si~~ 38 (64)
T PF03579_consen 11 TSKFWTYFTLIFMMLTIGFFFIVTSIMA 38 (64)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888777777666666665554443
No 241
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=22.99 E-value=1.2e+02 Score=28.41 Aligned_cols=48 Identities=10% Similarity=0.042 Sum_probs=33.5
Q ss_pred eEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchh-hHHHHHHHcC
Q 003824 294 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKME-TAINIGFACS 342 (793)
Q Consensus 294 ~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~-ta~~ia~~~g 342 (793)
..+-++|=| -..+++.+.++.+++.|+++++-||-..+ .-..++..+.
T Consensus 63 ~gVt~SGGE-l~~~~l~~ll~~lk~~Gl~i~l~Tg~~~~~~~~~il~~iD 111 (147)
T TIGR02826 63 SCVLFLGGE-WNREALLSLLKIFKEKGLKTCLYTGLEPKDIPLELVQHLD 111 (147)
T ss_pred CEEEEechh-cCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhCC
Confidence 456666777 34466999999999999999999996442 2234444433
No 242
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=22.67 E-value=1.6e+02 Score=31.07 Aligned_cols=44 Identities=18% Similarity=0.234 Sum_probs=35.1
Q ss_pred hcCceEEEEEeeecccCCChHHHHHHHHHcCC-eEEEEeCCchhh
Q 003824 290 EKNLILLGATAVEDKLQNGVPECIDKLAQAGI-KLWVLTGDKMET 333 (793)
Q Consensus 290 e~~l~~lG~~~ieD~lr~~v~~~I~~L~~agI-kv~mlTGD~~~t 333 (793)
+.++..+--+...|.=+.+...-+..++.+|| .|..+|||.+..
T Consensus 68 ~~g~~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~~ 112 (287)
T PF02219_consen 68 ETGIEPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPKG 112 (287)
T ss_dssp HTT--EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TSTT
T ss_pred HhCCceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCCC
Confidence 45889999999999888889999999999999 699999998755
No 243
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=21.98 E-value=6.1e+02 Score=24.97 Aligned_cols=38 Identities=11% Similarity=0.198 Sum_probs=26.3
Q ss_pred CCChHHHHHHHHHcCCe---EEEEeCCchhhHHHHHHHcCcc
Q 003824 306 QNGVPECIDKLAQAGIK---LWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 306 r~~v~~~I~~L~~agIk---v~mlTGD~~~ta~~ia~~~gi~ 344 (793)
||+-.-....+++.|++ -++.-||.. +-+..|+.+|+-
T Consensus 145 KP~p~~~~~a~~~~~~~~~~~~~~igD~~-~Di~aa~~aG~~ 185 (220)
T TIGR03351 145 RPAPDLILRAMELTGVQDVQSVAVAGDTP-NDLEAGINAGAG 185 (220)
T ss_pred CCCHHHHHHHHHHcCCCChhHeEEeCCCH-HHHHHHHHCCCC
Confidence 45443334445666774 377789996 789999999984
No 244
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=21.82 E-value=2.3e+02 Score=25.91 Aligned_cols=80 Identities=14% Similarity=0.179 Sum_probs=54.1
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHH
Q 003824 239 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 318 (793)
Q Consensus 239 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~ 318 (793)
-+...|+.|+-++... +.+++- ..-.|.+-.++|+-++-=.--+..+++++.|++
T Consensus 22 ~L~~~GfeVidLG~~v-~~e~~v------------------------~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~ 76 (128)
T cd02072 22 AFTEAGFNVVNLGVLS-PQEEFI------------------------DAAIETDADAILVSSLYGHGEIDCKGLREKCDE 76 (128)
T ss_pred HHHHCCCEEEECCCCC-CHHHHH------------------------HHHHHcCCCEEEEeccccCCHHHHHHHHHHHHH
Confidence 3557999999888543 333221 123456888999988887777888999999999
Q ss_pred cCC-eE-EEEeCCch------hhHHHHHHHcCc
Q 003824 319 AGI-KL-WVLTGDKM------ETAINIGFACSL 343 (793)
Q Consensus 319 agI-kv-~mlTGD~~------~ta~~ia~~~gi 343 (793)
+|+ .+ +++-|--. .....-.+++|+
T Consensus 77 ~gl~~v~vivGG~~~i~~~d~~~~~~~L~~~Gv 109 (128)
T cd02072 77 AGLKDILLYVGGNLVVGKQDFEDVEKRFKEMGF 109 (128)
T ss_pred CCCCCCeEEEECCCCCChhhhHHHHHHHHHcCC
Confidence 998 55 55555421 223355677776
No 245
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=21.69 E-value=83 Score=30.00 Aligned_cols=32 Identities=19% Similarity=0.273 Sum_probs=25.7
Q ss_pred CChHHHHHHHHHcCCeEEEEeCCchhhHHHHH
Q 003824 307 NGVPECIDKLAQAGIKLWVLTGDKMETAINIG 338 (793)
Q Consensus 307 ~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia 338 (793)
+.|.++++..++.|++++.+||++--.-..++
T Consensus 123 ~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 123 KNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred HHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 56889999999999999999999764443333
No 246
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=21.49 E-value=73 Score=28.59 Aligned_cols=33 Identities=15% Similarity=0.303 Sum_probs=26.5
Q ss_pred CCChHHHHHHHHHcCCeEEEEeCCchhhHHHHH
Q 003824 306 QNGVPECIDKLAQAGIKLWVLTGDKMETAINIG 338 (793)
Q Consensus 306 r~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia 338 (793)
-+++.++++.+++.|++++.+|+.+.......|
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~~a 92 (128)
T cd05014 60 TDELLNLLPHLKRRGAPIIAITGNPNSTLAKLS 92 (128)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCCCchhhhC
Confidence 457889999999999999999998765544443
No 247
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=21.44 E-value=1.3e+02 Score=30.83 Aligned_cols=49 Identities=20% Similarity=0.304 Sum_probs=35.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEE
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 351 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~ 351 (793)
-.+|+|+.+.++.|++.+|.+.|.|+-=......+-++.|...++..++
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~Vv 137 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVV 137 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEE
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEE
Confidence 3589999999999999999999999877777777777778877775543
No 248
>KOG4050 consensus Glutamate transporter EAAC1-interacting protein GTRAP3-18 [Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=21.02 E-value=3.1e+02 Score=25.92 Aligned_cols=43 Identities=21% Similarity=0.232 Sum_probs=22.0
Q ss_pred cCCeeecchhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHH
Q 003824 490 SSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGF 532 (793)
Q Consensus 490 ~aD~~i~~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~ 532 (793)
--||.+...++-.+-.-.-.||+-+-++.++.|+--+-++++.
T Consensus 22 ~ddF~lgS~Rfa~Pd~~D~~kW~nRVisNLLYyQTNYfv~~it 64 (188)
T KOG4050|consen 22 LDDFLLGSDRFARPDFNDFKKWNNRVISNLLYYQTNYFVTFIT 64 (188)
T ss_pred HHHhccCcccccCCCCccHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3455555444422221223467777777777777544444433
No 249
>KOG1504 consensus Ornithine carbamoyltransferase OTC/ARG3 [Amino acid transport and metabolism]
Probab=20.79 E-value=1.2e+02 Score=30.96 Aligned_cols=44 Identities=25% Similarity=0.277 Sum_probs=30.2
Q ss_pred cCChhhH----HHHHHHH-HhcCCCeEEEEcCCccC--hhhhhhcceeEEe
Q 003824 436 RSSPKQK----ALVTRLV-KTKTSSTTLAIGDGAND--VGMLQEADIGVGI 479 (793)
Q Consensus 436 r~sP~qK----~~iv~~l-k~~~~~~vlaiGDG~ND--~~ml~~AdvGI~i 479 (793)
...|.|- ..+++.+ |...|-++.-||||-|= .-|+.+|-+||..
T Consensus 167 ~~HPlQ~laD~LTi~E~f~ks~~glkvawiGD~NNvlhs~mia~ak~gih~ 217 (346)
T KOG1504|consen 167 HFHPLQILADLLTIIEHFGKSVEGLKVAWIGDGNNVLHSWMIAAAKFGIHF 217 (346)
T ss_pred ccChHHHHHHHHHHHHHHhccccccEEEEEccccHHHHHHHHHhhhcceEE
Confidence 3455553 3566666 43467789999999884 4588888888854
No 250
>PRK10263 DNA translocase FtsK; Provisional
Probab=20.66 E-value=1.9e+03 Score=28.64 Aligned_cols=10 Identities=40% Similarity=0.554 Sum_probs=4.6
Q ss_pred hhHHHHHHHH
Q 003824 639 EILGTTMYTC 648 (793)
Q Consensus 639 ~~~~t~~f~~ 648 (793)
..||...|..
T Consensus 77 ~LFGl~AYLL 86 (1355)
T PRK10263 77 FIFGVMAYTI 86 (1355)
T ss_pred HHHhHHHHHH
Confidence 3455444443
No 251
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=20.41 E-value=34 Score=35.15 Aligned_cols=12 Identities=42% Similarity=0.844 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHH
Q 003824 708 APSFWLITLLVL 719 (793)
Q Consensus 708 s~~~wl~~l~~~ 719 (793)
..++|-++.++.
T Consensus 133 GAs~WtiLaFcL 144 (381)
T PF05297_consen 133 GASFWTILAFCL 144 (381)
T ss_dssp ------------
T ss_pred hhHHHHHHHHHH
Confidence 344454444333
Done!