BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003826
(793 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/578 (38%), Positives = 340/578 (58%), Gaps = 23/578 (3%)
Query: 2 SAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSF 61
+A + Y +Q I+G+DDA++ +A ++ +S Q +F +LA +L LGNV F
Sbjct: 281 NANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEF 340
Query: 62 TVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTR 121
D+++ P + L L+G D E+ L RK+ +T ++ ++ A + R
Sbjct: 341 ASRDSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINAR 400
Query: 122 DALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANE 181
DALAK IYA LF W+V+ +NK+L ++ I +LDIYGFE+F+ NSFEQFCINYANE
Sbjct: 401 DALAKHIYANLFNWIVDHVNKALHSTVKQHS-FIGVLDIYGFETFEINSFEQFCINYANE 459
Query: 182 RLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLDEESTFPNG 241
+LQQ FN H+FKLEQEEY+++ I W +DF DN+ C+NL E K +G+L LLDEE P G
Sbjct: 460 KLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKG 518
Query: 242 TDLTFANKL-KQHLNSNPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIE 298
+D T+A KL HLN F R +K+F + H+A +V Y GFLEKN+D ++ + I+
Sbjct: 519 SDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIK 578
Query: 299 LLSSCSCH--LPQIF-------------ASNMLSQSNKPVVGPLYKAG-GADSQKLSVAT 342
+L S LP++F S + S PV + G + K +V
Sbjct: 579 VLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGH 638
Query: 343 KFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGF 402
+F+ L LM+ L +TTPH++RCIKPN+F+ P +++ +QQLR CGVLE +RIS +GF
Sbjct: 639 QFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGF 698
Query: 403 PTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGM 462
P+R ++Q+F RY L+ + D +L + + + YQ G TK+FFRAGQ+
Sbjct: 699 PSRWTYQEFFSRYRVLMKQKDVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAY 758
Query: 463 LEDTRNRTLH-GILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHR 521
LE R L +R+Q RG R +RR + +Q ++RG + R YA L+R R
Sbjct: 759 LEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARC-YATFLRRTR 817
Query: 522 AAVVIQRQIKSRVARQKLKNIKYSSIMIQSVIRGWLVR 559
AA++IQ+ + V R++ + ++ ++I +Q+++RG+LVR
Sbjct: 818 AAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVR 855
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/515 (39%), Positives = 297/515 (57%), Gaps = 22/515 (4%)
Query: 2 SAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSF 61
+A + Y +Q I+G+DDA++ +A ++ +S Q +F +LA +L LGNV F
Sbjct: 281 NANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEF 340
Query: 62 TVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTR 121
D+++ P + L L+G D E+ L RK+ +T ++ ++ A + R
Sbjct: 341 ASRDSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINAR 400
Query: 122 DALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANE 181
DALAK IYA LF W+V+ +NK+L ++ I +LDIYGFE+F+ NSFEQFCINYANE
Sbjct: 401 DALAKHIYANLFNWIVDHVNKALHSTVKQHS-FIGVLDIYGFETFEINSFEQFCINYANE 459
Query: 182 RLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLDEESTFPNG 241
+LQQ FN H+FKLEQEEY+++ I W +DF DN+ C+NL E K +G+L LLDEE P G
Sbjct: 460 KLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKG 518
Query: 242 TDLTFANKL-KQHLNSNPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIE 298
+D T+A KL HLN F R +K+F + H+A +V Y GFLEKN+D ++ + I+
Sbjct: 519 SDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIK 578
Query: 299 LLSSCSCH--LPQIF-------------ASNMLSQSNKPVVGPLYKAG-GADSQKLSVAT 342
+L S LP++F S + S PV + G + K +V
Sbjct: 579 VLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGH 638
Query: 343 KFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGF 402
+F+ L LM+ L +TTPH++RCIKPN+F+ P +++ +QQLR CGVLE +RIS +GF
Sbjct: 639 QFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGF 698
Query: 403 PTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGM 462
P+R ++Q+F RY L+ + D +L + + + YQ G TK+FFRAGQ+
Sbjct: 699 PSRWTYQEFFSRYRVLMKQKDVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAY 758
Query: 463 LEDTRNRTLH-GILRVQSCFRGHQARLCLKELRRG 496
LE R L +R+Q RG R +RRG
Sbjct: 759 LEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRG 793
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 359 bits (921), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 194/485 (40%), Positives = 285/485 (58%), Gaps = 21/485 (4%)
Query: 2 SAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSF 61
+A + Y +Q I+G+DDA++ +A ++ +S Q +F +LA +L LGNV F
Sbjct: 281 NANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEF 340
Query: 62 TVIDNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTR 121
D+++ P + L L+G D E+ L RK+ +T ++ ++ A + R
Sbjct: 341 ASRDSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINAR 400
Query: 122 DALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANE 181
DALAK IYA LF W+V+ +NK+L ++ I +LDIYGFE+F+ NSFEQFCINYANE
Sbjct: 401 DALAKHIYANLFNWIVDHVNKALHSTVKQHS-FIGVLDIYGFETFEINSFEQFCINYANE 459
Query: 182 RLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLDEESTFPNG 241
+LQQ FN H+FKLEQEEY+++ I W +DF DN+ C+NL E K +G+L LLDEE P G
Sbjct: 460 KLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKG 518
Query: 242 TDLTFANKL-KQHLNSNPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIE 298
+D T+A KL HLN F R +K+F + H+A +V Y GFLEKN+D ++ + I+
Sbjct: 519 SDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIK 578
Query: 299 LLSSCSCH--LPQIF-------------ASNMLSQSNKPVVGPLYKAG-GADSQKLSVAT 342
+L S LP++F S + S PV + G + K +V
Sbjct: 579 VLKSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGH 638
Query: 343 KFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGF 402
+F+ L LM+ L +TTPH++RCIKPN+F+ P +++ +QQLR CGVLE +RIS +GF
Sbjct: 639 QFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGF 698
Query: 403 PTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGM 462
P+R ++Q+F RY L+ + D +L + + + YQ G TK+FFRAGQ+
Sbjct: 699 PSRWTYQEFFSRYRVLMKQKDVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAY 758
Query: 463 LEDTR 467
LE R
Sbjct: 759 LEKIR 763
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 359 bits (921), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 200/471 (42%), Positives = 290/471 (61%), Gaps = 25/471 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 304 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 363
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 364 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 421
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L + R I +LDIYGFE F NSFEQ CINY NE+LQ
Sbjct: 422 VKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQ 479
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 480 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 539
Query: 243 DLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 540 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 598
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 599 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 648
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +L
Sbjct: 649 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YL 707
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTR 467
L +V ++D + A+L NI PE Y+ G TK+FFRAGQ+ +E+ R
Sbjct: 708 LAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 357 bits (916), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 199/471 (42%), Positives = 290/471 (61%), Gaps = 25/471 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 304 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 363
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 364 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 421
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L + R I +LDIYGFE F NSFEQ CINY NE+LQ
Sbjct: 422 VKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQ 479
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 480 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 539
Query: 243 DLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 540 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 598
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 599 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 648
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +L
Sbjct: 649 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YL 707
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTR 467
L +V ++D + A+L NI PE ++ G TK+FFRAGQ+ +E+ R
Sbjct: 708 LAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/478 (41%), Positives = 292/478 (61%), Gaps = 25/478 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 315 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 374
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 375 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 432
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L + R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 433 VKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 490
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 491 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 550
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 551 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 609
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 610 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 659
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +L
Sbjct: 660 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YL 718
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGI 474
L +V ++D + A+L NI PE Y+ G TK+FFRAGQ+ +E+ R + + I
Sbjct: 719 LAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRISEI 776
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/475 (42%), Positives = 291/475 (61%), Gaps = 25/475 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 315 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 374
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 375 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 432
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L + R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 433 VKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 490
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 491 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 550
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 551 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 609
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 610 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 659
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +L
Sbjct: 660 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YL 718
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTL 471
L +V ++D + A+L NI PE Y+ G TK+FFRAGQ+ +E+ R + L
Sbjct: 719 LAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRL 773
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/475 (42%), Positives = 291/475 (61%), Gaps = 25/475 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 303 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 362
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 363 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 420
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L + R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 421 VKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 478
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 479 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 538
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 539 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 597
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 598 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 647
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +L
Sbjct: 648 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YL 706
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTL 471
L +V ++D + A+L NI PE Y+ G TK+FFRAGQ+ +E+ R + L
Sbjct: 707 LAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRL 761
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/475 (42%), Positives = 291/475 (61%), Gaps = 25/475 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 315 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 374
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 375 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 432
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L + R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 433 VKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 490
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 491 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 550
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 551 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 609
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 610 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 659
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +L
Sbjct: 660 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YL 718
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTL 471
L +V ++D + A+L NI PE Y+ G TK+FFRAGQ+ +E+ R + L
Sbjct: 719 LAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRL 773
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/478 (41%), Positives = 292/478 (61%), Gaps = 25/478 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 315 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 374
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 375 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 432
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L + R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 433 VKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 490
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 491 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 550
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 551 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 609
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 610 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 659
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +L
Sbjct: 660 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YL 718
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGI 474
L +V ++D + A+L NI PE Y+ G TK+FFRAGQ+ +E+ R + + I
Sbjct: 719 LAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRISEI 776
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 355 bits (912), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 199/471 (42%), Positives = 289/471 (61%), Gaps = 25/471 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 304 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 363
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 364 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 421
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L + R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 422 VKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 479
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 480 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 539
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 540 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 598
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 599 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 648
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +L
Sbjct: 649 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YL 707
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTR 467
L +V ++D + A+L NI PE Y+ G TK+FFRAGQ+ +E+ R
Sbjct: 708 LAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 355 bits (911), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 208/523 (39%), Positives = 307/523 (58%), Gaps = 37/523 (7%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D ++F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 304 FNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 363
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 364 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 421
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 422 VKALYGRLFLWLVKKINNVLC--SERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 479
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FK+EQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 480 QFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 539
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 540 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 598
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 599 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 648
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +L
Sbjct: 649 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YL 707
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILR 476
L +V ++D + A+L NI PE Y+ G TK+FFRAGQ+ +E+ R + L G +
Sbjct: 708 LAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRL-GSEQ 766
Query: 477 VQSCF-----------RGHQARLCLKELRRGIVALQSFIRGEK 508
+S + QA L ++ I ++QSF+ K
Sbjct: 767 TKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHK 809
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 355 bits (911), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 199/471 (42%), Positives = 289/471 (61%), Gaps = 25/471 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 304 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 363
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 364 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 421
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L + R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 422 VKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 479
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 480 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 539
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 540 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 598
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 599 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 648
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +L
Sbjct: 649 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YL 707
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTR 467
L +V ++D + A+L NI PE Y+ G TK+FFRAGQ+ +E+ R
Sbjct: 708 LAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 355 bits (911), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 199/471 (42%), Positives = 289/471 (61%), Gaps = 25/471 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 304 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 363
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 364 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 421
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L + R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 422 VKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 479
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 480 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 539
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 540 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 598
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 599 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 648
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +L
Sbjct: 649 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YL 707
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTR 467
L +V ++D + A+L NI PE Y+ G TK+FFRAGQ+ +E+ R
Sbjct: 708 LAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 355 bits (911), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 199/471 (42%), Positives = 289/471 (61%), Gaps = 25/471 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 304 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 363
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 364 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 421
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L + R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 422 VKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDIEGFEIFKVNSFEQLCINYTNEKLQ 479
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 480 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 539
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 540 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 598
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 599 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 648
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +L
Sbjct: 649 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YL 707
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTR 467
L +V ++D + A+L NI PE Y+ G TK+FFRAGQ+ +E+ R
Sbjct: 708 LAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 354 bits (909), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 200/475 (42%), Positives = 290/475 (61%), Gaps = 25/475 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 303 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 362
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 363 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 420
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV +IN L + R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 421 VKALYGRLFLWLVIKINNVLC--QERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 478
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 479 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 538
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 539 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 597
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 598 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 647
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +L
Sbjct: 648 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YL 706
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTL 471
L +V ++D + A+L NI PE Y+ G TK+FFRAGQ+ +E+ R + L
Sbjct: 707 LAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAREQRL 761
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 198/471 (42%), Positives = 289/471 (61%), Gaps = 25/471 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 304 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 363
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 364 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 421
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L + R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 422 VKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 479
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FK+EQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 480 QFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 539
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 540 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 598
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 599 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 648
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +L
Sbjct: 649 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YL 707
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTR 467
L +V ++D + A+L NI PE Y+ G TK+FFRAGQ+ +E+ R
Sbjct: 708 LAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 198/471 (42%), Positives = 289/471 (61%), Gaps = 25/471 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 304 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 363
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 364 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 421
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L + R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 422 VKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 479
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 480 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 539
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 540 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 598
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 599 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 648
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +L
Sbjct: 649 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YL 707
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTR 467
L +V ++D + A+L NI PE ++ G TK+FFRAGQ+ +E+ R
Sbjct: 708 LAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 198/471 (42%), Positives = 289/471 (61%), Gaps = 25/471 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 304 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 363
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 364 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 421
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L + R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 422 VKALYGRLFLWLVKKINNVLC--EERKAYFIGVLDIEGFEIFKVNSFEQLCINYTNEKLQ 479
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 480 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 539
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 540 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 598
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 599 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 648
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +L
Sbjct: 649 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YL 707
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTR 467
L +V ++D + A+L NI PE ++ G TK+FFRAGQ+ +E+ R
Sbjct: 708 LAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 353 bits (906), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 198/471 (42%), Positives = 288/471 (61%), Gaps = 25/471 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 303 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 362
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 363 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 420
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L + R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 421 VKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 478
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 479 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 538
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 539 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 597
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 598 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 647
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC VLE +RI+R GFP R+ + F +RY +L
Sbjct: 648 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNAVLEGIRITRKGFPNRIIYADFVKRY-YL 706
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTR 467
L +V ++D + A+L NI PE Y+ G TK+FFRAGQ+ +E+ R
Sbjct: 707 LAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 757
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 352 bits (903), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 198/471 (42%), Positives = 288/471 (61%), Gaps = 25/471 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 303 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 362
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 363 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 420
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L + R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 421 VKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 478
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 479 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 538
Query: 243 DLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 539 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 597
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 598 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 647
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC VLE +RI+R GFP R+ + F +RY +L
Sbjct: 648 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNVVLEGIRITRKGFPNRIIYADFVKRY-YL 706
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTR 467
L +V ++D + A+L NI PE Y+ G TK+FFRAGQ+ +E+ R
Sbjct: 707 LAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 757
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 352 bits (902), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 197/471 (41%), Positives = 287/471 (60%), Gaps = 25/471 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D ++F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 304 FNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 363
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 364 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 421
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 422 VKALYGRLFLWLVKKINNVLC--SERAAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 479
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FK+EQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 480 QFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 539
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 540 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 598
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 599 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 648
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +L
Sbjct: 649 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YL 707
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTR 467
L +V ++D + A+L NI PE Y+ G TK+FFRAGQ+ +E+ R
Sbjct: 708 LAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 348 bits (894), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 196/471 (41%), Positives = 286/471 (60%), Gaps = 25/471 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D ++F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 304 FNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 363
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 364 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 421
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 422 VKALYGRLFLWLVKKINNVLC--SERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 479
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FK+EQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 480 QFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 539
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 540 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 598
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + L+VA ++K QL LM LE+T
Sbjct: 599 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFLTVAAQYKEQLASLMATLETT 648
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +
Sbjct: 649 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEAIRITRKGFPNRIIYADFVKRY-YD 707
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTR 467
L +V ++D + A+L NI PE ++ G TK+FFRAGQ+ +E+ R
Sbjct: 708 LAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 348 bits (892), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 196/471 (41%), Positives = 286/471 (60%), Gaps = 25/471 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 304 FNYLNQSGCVDIKGVSDEEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 363
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 364 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 421
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 422 VKALYGRLFLWLVKKINNVLC--SERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 479
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FK+EQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 480 QFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 539
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 540 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 598
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 599 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 648
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +
Sbjct: 649 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YD 707
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTR 467
L +V ++D + A+L NI PE ++ G TK+FFRAGQ+ +E+ R
Sbjct: 708 LAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 345 bits (886), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 195/471 (41%), Positives = 286/471 (60%), Gaps = 25/471 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D ++F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 304 FNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 363
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 364 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 421
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 422 VKALYGRLFLWLVKKINNVLC--SERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 479
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FK+EQE+Y+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 480 QFFNHHMFKVEQEKYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 539
Query: 243 DLTFANKLKQHLNS-NPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 540 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 598
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + L+VA ++K QL LM LE+T
Sbjct: 599 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFLTVAAQYKEQLASLMATLETT 648
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFL 418
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+ + F +RY +
Sbjct: 649 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRY-YD 707
Query: 419 LLESVA--SQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTR 467
L +V ++D + A+L NI PE ++ G TK+FFRAGQ+ +E+ R
Sbjct: 708 LAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFRAGQLARIEEAR 758
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 203/549 (36%), Positives = 299/549 (54%), Gaps = 64/549 (11%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
Y ++ Q C +++ +DD E+F++ EA DI+ +KE+++S+F A++L +G + F
Sbjct: 309 YSFINQG-CLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRP 367
Query: 66 NENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALA 125
E E VA L G + G+L AL K++VG + + + ++Q ++ ALA
Sbjct: 368 REEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALA 427
Query: 126 KSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQ 185
KS+Y +F WLV ++NK+L +R I +LDI GFE FD NSFEQ CINY NERLQQ
Sbjct: 428 KSLYDRMFNWLVRRVNKTLDTKAKRN-YYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQ 486
Query: 186 HFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLGLLSLLDEESTFPNGTDL 244
FN H+F LEQEEY ++GI W +DF D + C++L EK P+G+LS+L+EE FP D
Sbjct: 487 FFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGILSILEEECMFPKADDK 545
Query: 245 TFANKLKQ-HLNSN--------PCFRGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLD 295
+F +KL Q H+ N P + F + HYAG V Y TG+LEKN+D ++ +
Sbjct: 546 SFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINEN 605
Query: 296 SIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKL-----------SVATKF 344
+ LL + S +P+V L+KA + +++
Sbjct: 606 VVALLGA----------------SKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVH 649
Query: 345 KGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPT 404
+ L +LM+ L ST PHF+RCI PN + PGL + LVL QL+C GVLE +RI R GFP+
Sbjct: 650 RESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPS 709
Query: 405 RMSHQKFARRYGFLLLESVASQ--DPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGM 462
R+ + +F +RY L ++ D +VS IL + P Y++G TK+FF+AG +G
Sbjct: 710 RLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGN 769
Query: 463 LEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRA 522
LE+ R+ L I+ S F+ H IRG IRK Y + +
Sbjct: 770 LEEMRDERLSKII---SMFQAH-------------------IRGYLIRKAYKKLQDQRIG 807
Query: 523 AVVIQRQIK 531
VIQR I+
Sbjct: 808 LSVIQRNIR 816
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 203/549 (36%), Positives = 299/549 (54%), Gaps = 64/549 (11%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
Y ++ Q C +++ +DD E+F++ EA DI+ +KE+++S+F A++L +G + F
Sbjct: 309 YSFINQG-CLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRP 367
Query: 66 NENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALA 125
E E VA L G + G+L AL K++VG + + + ++Q ++ ALA
Sbjct: 368 REEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALA 427
Query: 126 KSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQ 185
KS+Y +F WLV ++NK+L +R I +LDI GFE FD NSFEQ CINY NERLQQ
Sbjct: 428 KSLYDRMFNWLVRRVNKTLDTKAKRN-YYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQ 486
Query: 186 HFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLGLLSLLDEESTFPNGTDL 244
FN H+F LEQEEY ++GI W +DF D + C++L EK P+G+LS+L+EE FP D
Sbjct: 487 FFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGILSILEEECMFPKADDK 545
Query: 245 TFANKLKQ-HLNSN--------PCFRGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLD 295
+F +KL Q H+ N P + F + HYAG V Y TG+LEKN+D ++ +
Sbjct: 546 SFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINEN 605
Query: 296 SIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKL-----------SVATKF 344
+ LL + S +P+V L+KA + +++
Sbjct: 606 VVALLGA----------------SKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVH 649
Query: 345 KGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPT 404
+ L +LM+ L ST PHF+RCI PN + PGL + LVL QL+C GVLE +RI R GFP+
Sbjct: 650 RESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPS 709
Query: 405 RMSHQKFARRYGFLLLESVASQ--DPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGM 462
R+ + +F +RY L ++ D +VS IL + P Y++G TK+FF+AG +G
Sbjct: 710 RLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGN 769
Query: 463 LEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRA 522
LE+ R+ L I+ S F+ H IRG IRK Y + +
Sbjct: 770 LEEMRDERLSKII---SMFQAH-------------------IRGYLIRKAYKKLQDQRIG 807
Query: 523 AVVIQRQIK 531
VIQR I+
Sbjct: 808 LSVIQRNIR 816
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 203/549 (36%), Positives = 299/549 (54%), Gaps = 64/549 (11%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
Y ++ Q C +++ +DD E+F++ EA DI+ +KE+++S+F A++L +G + F
Sbjct: 309 YSFINQG-CLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRP 367
Query: 66 NENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALA 125
E E VA L G + G+L AL K++VG + + + ++Q ++ ALA
Sbjct: 368 REEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALA 427
Query: 126 KSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQ 185
KS+Y +F WLV ++NK+L +R I +LDI GFE FD NSFEQ CINY NERLQQ
Sbjct: 428 KSLYDRMFNWLVRRVNKTLDTKAKRN-YYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQ 486
Query: 186 HFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLGLLSLLDEESTFPNGTDL 244
FN H+F LEQEEY ++GI W +DF D + C++L EK P+G+LS+L+EE FP D
Sbjct: 487 FFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGILSILEEECMFPKADDK 545
Query: 245 TFANKLKQ-HLNSN--------PCFRGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLD 295
+F +KL Q H+ N P + F + HYAG V Y TG+LEKN+D ++ +
Sbjct: 546 SFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINEN 605
Query: 296 SIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKL-----------SVATKF 344
+ LL + S +P+V L+KA + +++
Sbjct: 606 VVALLGA----------------SKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVH 649
Query: 345 KGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPT 404
+ L +LM+ L ST PHF+RCI PN + PGL + LVL QL+C GVLE +RI R GFP+
Sbjct: 650 RESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPS 709
Query: 405 RMSHQKFARRYGFLLLESVASQ--DPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGM 462
R+ + +F +RY L ++ D +VS IL + P Y++G TK+FF+AG +G
Sbjct: 710 RLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGN 769
Query: 463 LEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRA 522
LE+ R+ L I+ S F+ H IRG IRK Y + +
Sbjct: 770 LEEMRDERLSKII---SMFQAH-------------------IRGYLIRKAYKKLQDQRIG 807
Query: 523 AVVIQRQIK 531
VIQR I+
Sbjct: 808 LSVIQRNIR 816
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 203/549 (36%), Positives = 299/549 (54%), Gaps = 64/549 (11%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
Y ++ Q C +++ +DD E+F++ EA DI+ +KE+++S+F A++L +G + F
Sbjct: 305 YSFINQG-CLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRP 363
Query: 66 NENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALA 125
E E VA L G + G+L AL K++VG + + + ++Q ++ ALA
Sbjct: 364 REEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALA 423
Query: 126 KSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQ 185
KS+Y +F WLV ++NK+L +R I +LDI GFE FD NSFEQ CINY NERLQQ
Sbjct: 424 KSLYDRMFNWLVRRVNKTLDTKAKRN-YYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQ 482
Query: 186 HFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLGLLSLLDEESTFPNGTDL 244
FN H+F LEQEEY ++GI W +DF D + C++L EK P+G+LS+L+EE FP D
Sbjct: 483 FFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGILSILEEECMFPKADDK 541
Query: 245 TFANKLKQ-HLNSN--------PCFRGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLD 295
+F +KL Q H+ N P + F + HYAG V Y TG+LEKN+D ++ +
Sbjct: 542 SFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINEN 601
Query: 296 SIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKL-----------SVATKF 344
+ LL + S +P+V L+KA + +++
Sbjct: 602 VVALLGA----------------SKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVH 645
Query: 345 KGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPT 404
+ L +LM+ L ST PHF+RCI PN + PGL + LVL QL+C GVLE +RI R GFP+
Sbjct: 646 RESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPS 705
Query: 405 RMSHQKFARRYGFLLLESVASQ--DPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGM 462
R+ + +F +RY L ++ D +VS IL + P Y++G TK+FF+AG +G
Sbjct: 706 RLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGN 765
Query: 463 LEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRA 522
LE+ R+ L I+ S F+ H IRG IRK Y + +
Sbjct: 766 LEEMRDERLSKII---SMFQAH-------------------IRGYLIRKAYKKLQDQRIG 803
Query: 523 AVVIQRQIK 531
VIQR I+
Sbjct: 804 LSVIQRNIR 812
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 203/549 (36%), Positives = 299/549 (54%), Gaps = 64/549 (11%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
Y ++ Q C +++ +DD E+F++ EA DI+ +KE+++S+F A++L +G + F
Sbjct: 304 YSFINQG-CLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRP 362
Query: 66 NENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALA 125
E E VA L G + G+L AL K++VG + + + ++Q ++ ALA
Sbjct: 363 REEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALA 422
Query: 126 KSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQ 185
KS+Y +F WLV ++NK+L +R I +LDI GFE FD NSFEQ CINY NERLQQ
Sbjct: 423 KSLYDRMFNWLVRRVNKTLDTKAKRN-YYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQ 481
Query: 186 HFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLGLLSLLDEESTFPNGTDL 244
FN H+F LEQEEY ++GI W +DF D + C++L EK P+G+LS+L+EE FP D
Sbjct: 482 FFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGILSILEEECMFPKADDK 540
Query: 245 TFANKLKQ-HLNSN--------PCFRGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLD 295
+F +KL Q H+ N P + F + HYAG V Y TG+LEKN+D ++ +
Sbjct: 541 SFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINEN 600
Query: 296 SIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKL-----------SVATKF 344
+ LL + S +P+V L+KA + +++
Sbjct: 601 VVALLGA----------------SKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVH 644
Query: 345 KGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPT 404
+ L +LM+ L ST PHF+RCI PN + PGL + LVL QL+C GVLE +RI R GFP+
Sbjct: 645 RESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPS 704
Query: 405 RMSHQKFARRYGFLLLESVASQ--DPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGM 462
R+ + +F +RY L ++ D +VS IL + P Y++G TK+FF+AG +G
Sbjct: 705 RLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGN 764
Query: 463 LEDTRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRA 522
LE+ R+ L I+ S F+ H IRG IRK Y + +
Sbjct: 765 LEEMRDERLSKII---SMFQAH-------------------IRGYLIRKAYKKLQDQRIG 802
Query: 523 AVVIQRQIK 531
VIQR I+
Sbjct: 803 LSVIQRNIR 811
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 195/538 (36%), Positives = 294/538 (54%), Gaps = 41/538 (7%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
Y ++ Q C +++ +DD E+F++ EA DI+ +KE++ S+F A++L +G + F
Sbjct: 311 YSFINQG-CLTVDNIDDVEEFKLCDEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQRP 369
Query: 66 NENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALA 125
E E VA L G + G+L AL K++VG + + + L Q ++ AL+
Sbjct: 370 REEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALS 429
Query: 126 KSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQ 185
KS+Y +F WLV+++N++L +R I +LDI GFE FD NSFEQ CINY NERLQQ
Sbjct: 430 KSLYDRMFNWLVKRVNRTLDTKAKRN-YYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQ 488
Query: 186 HFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLGLLSLLDEESTFPNGTDL 244
FN H+F LEQEEY ++GI W +DF D + C++L EK P+G+LS+L+EE FP D
Sbjct: 489 FFNHHMFVLEQEEYKKEGIQWEFIDFGMDLQMCIDLIEK-PMGILSILEEECMFPKADDK 547
Query: 245 TFAN-KLKQHLNSN--------PCFRGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLD 295
+F + + H+ N P + F + HYAG V Y G+L+KN+D ++ +
Sbjct: 548 SFQDYSYQNHIGKNRMFTKPGKPTRPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINEN 607
Query: 296 SIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRL 355
+ LL+ + + + ++P G K S +++ + L +LM+ L
Sbjct: 608 VVSLLAVSK----EPLVAELFRAPDEPAGGAGGKKKKKSSAFQTISAVHRESLNKLMKNL 663
Query: 356 ESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRY 415
ST PHF+RCI PN + PGL + LVL QL+C GVLE +RI R GFP+R+ + +F +RY
Sbjct: 664 YSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRY 723
Query: 416 GFLLLESVASQ--DPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHG 473
L ++ D +VS IL + P Y++G TK+FF+AG +G LE+ R+ L
Sbjct: 724 SILAPNAIPQGFVDGKTVSEKILTGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSK 783
Query: 474 ILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIK 531
I+ S F+ H IRG IRK Y + + VIQR I+
Sbjct: 784 II---SMFQAH-------------------IRGYLIRKAYKKLQDQRIGLSVIQRNIR 819
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 325 bits (834), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 196/516 (37%), Positives = 294/516 (56%), Gaps = 27/516 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
Y ++ Q + +++G+DD E+ + A D++ + E++ S++ +L LG + +
Sbjct: 314 YGFINQGTL-TVDGIDDEEEMGLTDTAFDVLGFTDEEKLSMYKCTGCILHLGEMKWKQRG 372
Query: 66 NENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALA 125
+ + A+ VA L+G + G+L L K++VG + + Q Q T++ ALA
Sbjct: 373 EQAEADGTAEAE--KVAFLLGVNAGDLLKCLLKPKIKVGTEYVTQGRNKDQVTNSIAALA 430
Query: 126 KSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQ 185
KS+Y +F WLV ++N++L +R I +LDI GFE FD NSFEQ CINY NERLQQ
Sbjct: 431 KSLYDRMFNWLVRRVNQTLDTKAKRQ-FFIGVLDIAGFEIFDFNSFEQLCINYTNERLQQ 489
Query: 186 HFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLGLLSLLDEESTFPNGTDL 244
FN H+F LEQEEY ++GI W +DF D + C+ L EK P+G+LS+L+EE FP +D
Sbjct: 490 FFNHHMFVLEQEEYKKEGIVWEFIDFGLDLQACIELIEK-PMGILSILEEECMFPKASDT 548
Query: 245 TFANKL-KQHLNSNPCF-------RGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDS 296
+F NKL HL NP F G + F + HYAG V Y G+L+KN+D ++ +
Sbjct: 549 SFKNKLYDNHLGKNPMFGKPKPPKAGCAEAHFCLHHYAGSVSYSIAGWLDKNKDPINENV 608
Query: 297 IELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKL-SVATKFKGQLFQLMQRL 355
+ELL + + + ML + ++ P K S ++++ K L +LM+ L
Sbjct: 609 VELLQNSKEPIVK-----MLFTPPR-ILTPGGKKKKGKSAAFQTISSVHKESLNKLMKNL 662
Query: 356 ESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRY 415
ST PHF+RCI PN ++PGL + LVL QLRC GVLE +RI R GFP R+ + +F +RY
Sbjct: 663 YSTHPHFVRCIIPNELKTPGLIDAALVLHQLRCNGVLEGIRICRKGFPNRIIYSEFKQRY 722
Query: 416 GFLLLESVAS--QDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHG 473
L +V S D V+ L + P Y++G TK+FF+AG +GMLED R+ L
Sbjct: 723 SILAPNAVPSGFADGKVVTDKALSALQLDPNEYRLGNTKVFFKAGVLGMLEDMRDERLSK 782
Query: 474 ILRV-QSCFRGHQARLCLKEL---RRGIVALQSFIR 505
I+ + Q+ RG+ R K+L R G+ +Q +R
Sbjct: 783 IISMFQAHIRGYLMRKAYKKLQDQRIGLTLIQRNVR 818
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 322 bits (826), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 194/517 (37%), Positives = 287/517 (55%), Gaps = 22/517 (4%)
Query: 5 EYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVI 64
+Y Y+ Q ++ +DD E+ A+DI+ S +++ +++ + AV+ GN+ F
Sbjct: 308 DYHYVSQGEI-TVPSIDDQEELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQK 366
Query: 65 DNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E EP E A L+G + EL AL +++VGN+ + + T+SQ ++ AL
Sbjct: 367 QREEQAEPDGTEVADKAAYLMGLNSAELLKALCYPRVKVGNEFVTKGQTVSQVHNSVGAL 426
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
AK++Y +F W+V +IN+ L + R I +LDI GFE FD NSFEQ CIN+ NE+LQ
Sbjct: 427 AKAVYEKMFLWMVIRINQQLDTKQPRQ-YFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQ 485
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDF-EDNKDCLNLFEKKPLGLLSLLDEESTFPNGTD 243
Q FN H+F LEQEEY ++GI+W +DF D C+ L E KP+G+ S+L+EE FP TD
Sbjct: 486 QFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIE-KPMGIFSILEEECMFPKATD 544
Query: 244 LTFANKL-KQHLNSNPCF------RGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDS 296
+F NKL QHL + F +G+ + F++ HYAG V Y+ +G+LEKN+D L+
Sbjct: 545 TSFKNKLYDQHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETV 604
Query: 297 IELLSSCSCH-LPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRL 355
I L S L +FA+ S +V+ F+ L +LM L
Sbjct: 605 IGLYQKSSVKTLALLFATYGGEAEGGGGKK---GGKKKGSSFQTVSALFRENLNKLMANL 661
Query: 356 ESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRY 415
ST PHF+RCI PN ++PG E LVL QLRC GVLE +RI R GFP+R+ + F +RY
Sbjct: 662 RSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRY 721
Query: 416 GFLLLESVAS---QDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLH 472
L ++ D S +L ++ Y+ G+TK+FF+AG +G+LE+ R+ L
Sbjct: 722 RVLNASAIPEGQFMDSKKASEKLLGSIDVDHTQYRFGHTKVFFKAGLLGLLEEMRDDKLA 781
Query: 473 GIL-RVQSCFRGHQARLCLK---ELRRGIVALQSFIR 505
I+ R Q+ RG R+ + E R I +Q +R
Sbjct: 782 EIITRTQARCRGFLMRVEYRRMVERRESIFCIQYNVR 818
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 321 bits (823), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 194/538 (36%), Positives = 292/538 (54%), Gaps = 41/538 (7%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
Y ++ Q C +++ +DD E+F++ EA DI+ +KE++ S+F A++L +G + F
Sbjct: 310 YSFINQG-CLTVDNIDDVEEFKLCDEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQRP 368
Query: 66 NENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALA 125
E E VA L G + G+L AL K++VG + + + L Q ++ AL+
Sbjct: 369 REEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALS 428
Query: 126 KSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQ 185
KS+Y +F WLV+++N++L +R I +LDI GFE FD NSFEQ CINY NERLQQ
Sbjct: 429 KSLYDRMFNWLVKRVNRTLDTKAKRN-YYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQ 487
Query: 186 HFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLGLLSLLDEESTFPNGTDL 244
FN H+F LEQEEY ++GI W +DF D + C++L EK P+G+LS+L+EE FP D
Sbjct: 488 FFNHHMFVLEQEEYKKEGIQWEFIDFGMDLQMCIDLIEK-PMGILSILEEECMFPKADDK 546
Query: 245 TFAN-KLKQHLNSN--------PCFRGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLD 295
+F + + H+ N P + F + HYAG V Y G+L+KN+D ++ +
Sbjct: 547 SFQDYSYQNHIGKNRMFTKPGKPTRPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINEN 606
Query: 296 SIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRL 355
+ LL+ + + + ++P G K S +++ + L +LM L
Sbjct: 607 VVSLLAVSK----EPLVAELFRAPDEPAGGAGGKKKKKSSAFQTISAVHRESLNKLMCNL 662
Query: 356 ESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRY 415
T PHF+RCI PN + PGL + LVL QL+C GVLE +RI R GFP+R+ + +F +RY
Sbjct: 663 RRTNPHFVRCIIPNLEKDPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRY 722
Query: 416 GFLLLESVASQ--DPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHG 473
L ++ D +VS IL + P Y++G TK+FF+AG +G LE+ R+ L
Sbjct: 723 SILAPNAIPQGFVDGKTVSEKILTGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSK 782
Query: 474 ILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIK 531
I+ S F+ H IRG IRK Y + + VIQR I+
Sbjct: 783 II---SMFQAH-------------------IRGYLIRKAYKKLQDQRIGLSVIQRNIR 818
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 311 bits (798), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 174/405 (42%), Positives = 250/405 (61%), Gaps = 22/405 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 303 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 362
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 363 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 420
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV++IN L + R I +LDIYGFE F NSFEQ CINY NE+LQ
Sbjct: 421 VKALYGRLFLWLVKKINNVLC--QERKAYFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQ 478
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 479 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 538
Query: 243 DLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 539 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 597
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 598 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 647
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFP 403
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP
Sbjct: 648 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFP 692
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 174/408 (42%), Positives = 250/408 (61%), Gaps = 22/408 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
+ YL QS C I GV D+E+F+I +A+DIV S+E+Q S+F ++A +L LGN+ F
Sbjct: 303 FNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA 362
Query: 66 NENHVEPVADEGLITVAKLI-GCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E V + D+ + A + G + L+ AL ++ G D + Q+L + +++ +RDAL
Sbjct: 363 GEGAV--LKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDAL 420
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
K++Y LF WLV +IN L + R I +LDI GFE F NSFEQ CINY NE+LQ
Sbjct: 421 VKALYGRLFLWLVIKINNVLC--QERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQ 478
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFE-KKPLGLLSLLDEESTFPNGT 242
Q FN H+FKLEQEEY+++ I+W +DF D++ ++L + ++P G+L+LLDE+S FPN T
Sbjct: 479 QFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 538
Query: 243 DLTFANKLKQHLN-SNPCFRGER--DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
D T KL H + N + R F V+HYAG+V+Y+ +LEKN+D L D +EL
Sbjct: 539 DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD-LEL 597
Query: 300 LSSCSCHLPQIFASNMLSQ-SNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLEST 358
S + N++++ N P + K G + ++VA ++K QL LM LE+T
Sbjct: 598 CFKDS-------SDNVVTKLFNDPNIASRAKKG---ANFITVAAQYKEQLASLMATLETT 647
Query: 359 TPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRM 406
PHF+RCI PNN Q P E +VL QLRC GVLE +RI+R GFP R+
Sbjct: 648 NPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRI 695
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 175/478 (36%), Positives = 272/478 (56%), Gaps = 16/478 (3%)
Query: 5 EYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVI 64
+Y ++ Q ++ +DDAE+ A D++ + E++ S++ + A++ GN+ F +
Sbjct: 309 DYAFISQGET-TVASIDDAEELMATDNAFDVLGFTSEEKNSMYKLTGAIMHFGNMKFKLK 367
Query: 65 DNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E EP E A L+G + +L L +++VGN+ + + + Q AL
Sbjct: 368 QREEQAEPDGTEEADKSAYLMGLNSADLLKGLCHPRVKVGNEYVTKGQNVQQVIYATGAL 427
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
AK++Y +F W+V +IN +L + R I +LDI GFE FD NSFEQ CIN+ NE+LQ
Sbjct: 428 AKAVYERMFNWMVTRINATLETKQPRQ-YFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQ 486
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLGLLSLLDEESTFPNGTD 243
Q FN H+F LEQEEY ++GI+W +DF D + C++L E KP+G++S+L+EE FP TD
Sbjct: 487 QFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQACIDLIE-KPMGIMSILEEECMFPKATD 545
Query: 244 LTFANKL-KQHLNSNPCF------RGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDS 296
+TF KL HL + F +G+ + F++ HYAG V Y+ G+L+KN+D L+
Sbjct: 546 MTFKAKLFDNHLGKSANFQKPRNIKGKPEAHFSLIHYAGIVDYNIIGWLQKNKDPLNETV 605
Query: 297 IELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLE 356
+ L S L +N + ++ P+ KA S + +V+ + L +LM L
Sbjct: 606 VGLYQKSSLKLLSTLFAN-YAGADAPIEKGKGKAKKGSSFQ-TVSALHRENLNKLMTNLR 663
Query: 357 STTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYG 416
ST PHF+RCI PN +SPG+ + LV+ QLRC GVLE +RI R GFP R+ + F +RY
Sbjct: 664 STHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYR 723
Query: 417 FLLLESVASQ---DPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTL 471
L ++ D + +L +I Y+ G+TK+FF+AG +G+LE+ R+ L
Sbjct: 724 ILNPAAIPEGQFIDSRKGAEKLLSSLDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERL 781
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/540 (34%), Positives = 276/540 (51%), Gaps = 40/540 (7%)
Query: 5 EYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVI 64
+Y Y+ + ++ +DD E+ A+DI+ S ++ +++ + AV+ GN+ F
Sbjct: 311 DYHYVSEGEI-TVPSIDDQEELMATDSAIDILGFSADEXTAIYXLTGAVMHYGNLKFXQX 369
Query: 65 DNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E EP E A L+G + EL AL ++ VGN+ + T+S+ ++ AL
Sbjct: 370 QREEQAEPDGTEVADXAAYLMGLNSAELLKALCYPRVGVGNEAVTXGETVSEVHNSVGAL 429
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
A ++Y +F W+V +IN+ L + R I +LDI GFE FD NSFEQ CIN+ NE LQ
Sbjct: 430 AXAVYEXMFLWMVIRINQQLDTKQPRQ-YFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQ 488
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLGLLSLLDEESTFPNGTD 243
Q FN H+F LEQEEY +GI+W +DF D C+ L E P+G+ S+L+EE FP TD
Sbjct: 489 QFFNHHMFVLEQEEYXXEGIEWEFIDFGMDLAACIELIE-XPMGIFSILEEECMFPKATD 547
Query: 244 LTFANKL-KQHLNSNPCF------RGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDS 296
+F N L +HL + F +G+ + F++ HYAG V Y+ +G+LE N D L+
Sbjct: 548 TSFXNXLYDEHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEXNXDPLNETV 607
Query: 297 IELLSSCSCH-LPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRL 355
I L S L +FA+ S +V+ F+ L LM L
Sbjct: 608 IGLYQXSSVXTLALLFATYGGEAEGGGGKK---GGKKKGSSFQTVSALFRENLNXLMANL 664
Query: 356 ESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRY 415
ST PHF+RCI PN +PG E LVL QLRC GVLE +RI R GFP+R+ + F +RY
Sbjct: 665 RSTHPHFVRCIIPNETXTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRY 724
Query: 416 GFLLLESVAS---QDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLH 472
L ++ D S +L ++ Y G+T +FF AG +G+LE+ R+ L
Sbjct: 725 RVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQYAFGHTXVFFXAGLLGLLEEMRDDXLA 784
Query: 473 GILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIKS 532
I I A Q+ RG +R EY +++R + IQ ++S
Sbjct: 785 EI----------------------ITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRS 822
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/540 (34%), Positives = 276/540 (51%), Gaps = 40/540 (7%)
Query: 5 EYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVI 64
+Y Y+ + ++ +DD E+ A+DI+ S ++ +++ + AV+ GN+ F
Sbjct: 308 DYHYVSEGEI-TVPSIDDQEELMATDSAIDILGFSADEXTAIYXLTGAVMHYGNLKFXQX 366
Query: 65 DNENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDAL 124
E EP E A L+G + EL AL ++ VGN+ + T+S+ ++ AL
Sbjct: 367 QREEQAEPDGTEVADXAAYLMGLNSAELLKALCYPRVGVGNEAVTXGETVSEVHNSVGAL 426
Query: 125 AKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQ 184
A ++Y +F W+V +IN+ L + R I +LDI GFE FD NSFEQ CIN+ NE LQ
Sbjct: 427 AXAVYEXMFLWMVIRINQQLDTKQPRQ-YFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQ 485
Query: 185 QHFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKKPLGLLSLLDEESTFPNGTD 243
Q FN H+F LEQEEY +GI+W +DF D C+ L E P+G+ S+L+EE FP TD
Sbjct: 486 QFFNHHMFVLEQEEYXXEGIEWEFIDFGMDLAACIELIE-XPMGIFSILEEECMFPKATD 544
Query: 244 LTFANKL-KQHLNSNPCF------RGERDKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDS 296
+F N L +HL + F +G+ + F++ HYAG V Y+ +G+LE N D L+
Sbjct: 545 TSFXNXLYDEHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEXNXDPLNETV 604
Query: 297 IELLSSCSCH-LPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRL 355
I L S L +FA+ S +V+ F+ L LM L
Sbjct: 605 IGLYQXSSVXTLALLFATYGGEAEGGGGKK---GGKKKGSSFQTVSALFRENLNXLMANL 661
Query: 356 ESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRY 415
ST PHF+RCI PN +PG E LVL QLRC GVLE +RI R GFP+R+ + F +RY
Sbjct: 662 RSTHPHFVRCIIPNETXTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRY 721
Query: 416 GFLLLESVAS---QDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLH 472
L ++ D S +L ++ Y G+T +FF AG +G+LE+ R+ L
Sbjct: 722 RVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQYAFGHTXVFFXAGLLGLLEEMRDDXLA 781
Query: 473 GILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIKS 532
I I A Q+ RG +R EY +++R + IQ ++S
Sbjct: 782 EI----------------------ITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRS 819
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 187/543 (34%), Positives = 288/543 (53%), Gaps = 40/543 (7%)
Query: 17 INGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADE 76
I D E F+ +EA+ I+ ++E+Q S+ ++++VL LGN+ F N + +
Sbjct: 322 IPAQQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNT 381
Query: 77 GLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWL 136
V L+G ++ + ++ T +++VG D + + T QA +ALAK+ + LF W+
Sbjct: 382 AAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWI 441
Query: 137 VEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQ 196
+ ++NK+L KR+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LEQ
Sbjct: 442 LTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQ 501
Query: 197 EEYIQDGIDWAKVDFE-DNKDCLNLFEK--KPLGLLSLLDEESTFPNGTDLTFANKLKQH 253
EEY ++GI+W +DF D + C+ L E+ P G+L+LLDEE FP TD +F KL Q
Sbjct: 502 EEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQE 561
Query: 254 LNSNPCFRGE---RDKS-FTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQ 309
++ F+ +DK+ F + HYAG+V Y+ + +L KN D L+ + LL+ S
Sbjct: 562 QGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVA 621
Query: 310 IFASNM-----LSQSNKPVVGPLYKAGGADSQKL-SVATKFKGQLFQLMQRLESTTPHFI 363
++ L Q K L A +V +K QL +LM L +T P+F+
Sbjct: 622 DLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFV 681
Query: 364 RCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESV 423
RCI PN+ + G + LVL+QLRC GVLE +RI R GFP R+ Q+F +RY L ++
Sbjct: 682 RCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAI 741
Query: 424 AS--QDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCF 481
D + ++ + P +Y++G +K+FFR G + LE+ R+ + +
Sbjct: 742 PKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDV------- 794
Query: 482 RGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIKSRVARQKLKN 541
I+A Q+ RG RK +A Q+ A VIQR A KL+N
Sbjct: 795 ---------------IIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRNC---AAYLKLRN 836
Query: 542 IKY 544
++
Sbjct: 837 WQW 839
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 187/543 (34%), Positives = 288/543 (53%), Gaps = 40/543 (7%)
Query: 17 INGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADE 76
I D E F+ +EA+ I+ ++E+Q S+ ++++VL LGN+ F N + +
Sbjct: 322 IPAQQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNT 381
Query: 77 GLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWL 136
V L+G ++ + ++ T +++VG D + + T QA +ALAK+ + LF W+
Sbjct: 382 AAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWI 441
Query: 137 VEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQ 196
+ ++NK+L KR+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LEQ
Sbjct: 442 LTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQ 501
Query: 197 EEYIQDGIDWAKVDFE-DNKDCLNLFEK--KPLGLLSLLDEESTFPNGTDLTFANKLKQH 253
EEY ++GI+W +DF D + C+ L E+ P G+L+LLDEE FP TD +F KL Q
Sbjct: 502 EEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQE 561
Query: 254 LNSNPCFRGE---RDKS-FTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQ 309
++ F+ +DK+ F + HYAG+V Y+ + +L KN D L+ + LL+ S
Sbjct: 562 QGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVA 621
Query: 310 IFASNM-----LSQSNKPVVGPLYKAGGADSQKL-SVATKFKGQLFQLMQRLESTTPHFI 363
++ L Q K L A +V +K QL +LM L +T P+F+
Sbjct: 622 DLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFV 681
Query: 364 RCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESV 423
RCI PN+ + G + LVL+QLRC GVLE +RI R GFP R+ Q+F +RY L ++
Sbjct: 682 RCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAI 741
Query: 424 AS--QDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSCF 481
D + ++ + P +Y++G +K+FFR G + LE+ R+ + +
Sbjct: 742 PKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDV------- 794
Query: 482 RGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIKSRVARQKLKN 541
I+A Q+ RG RK +A Q+ A VIQR A KL+N
Sbjct: 795 ---------------IIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRNC---AAYLKLRN 836
Query: 542 IKY 544
++
Sbjct: 837 WQW 839
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/544 (34%), Positives = 288/544 (52%), Gaps = 40/544 (7%)
Query: 16 SINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVAD 75
I D E F+ +EA+ I+ ++E+Q S+ ++++VL LGN+ F N + +
Sbjct: 321 PIPAQQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN 380
Query: 76 EGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEW 135
V L+G ++ + ++ T +++VG D + + T QA +ALAK+ + LF W
Sbjct: 381 TAAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRW 440
Query: 136 LVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLE 195
++ ++NK+L KR+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LE
Sbjct: 441 ILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILE 500
Query: 196 QEEYIQDGIDWAKVDFE-DNKDCLNLFEK--KPLGLLSLLDEESTFPNGTDLTFANKLKQ 252
QEEY ++GI+W +DF D + C+ L E+ P G+L+LLDEE FP TD +F KL Q
Sbjct: 501 QEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQ 560
Query: 253 HLNSNPCFRGER---DKS-FTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLP 308
++ F+ + DK+ F + HYAG+V Y+ + +L KN D L+ + LL+ S
Sbjct: 561 EQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFV 620
Query: 309 QIFASNM-----LSQSNKPVVGPLYKAGGADSQKL-SVATKFKGQLFQLMQRLESTTPHF 362
++ L Q K L A +V +K QL +LM L +T P+F
Sbjct: 621 ADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNF 680
Query: 363 IRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLES 422
+RCI PN+ + G + LVL+QLRC GVLE +RI R GFP R+ Q+F +RY L +
Sbjct: 681 VRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANA 740
Query: 423 VAS--QDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRNRTLHGILRVQSC 480
+ D + ++ + P +Y++G +K+FFR G + LE+ R+ + +
Sbjct: 741 IPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDV------ 794
Query: 481 FRGHQARLCLKELRRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIKSRVARQKLK 540
I+A Q+ RG RK +A Q+ A VIQR A KL+
Sbjct: 795 ----------------IIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRNC---AAYLKLR 835
Query: 541 NIKY 544
N ++
Sbjct: 836 NWQW 839
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/487 (35%), Positives = 271/487 (55%), Gaps = 16/487 (3%)
Query: 17 INGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVADE 76
I D E F+ +EA+ I+ ++E+Q S+ ++++VL LGN+ F N + +
Sbjct: 322 IPAQQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNT 381
Query: 77 GLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEWL 136
V L+G ++ + ++ T +++VG D + + T QA +ALAK+ + LF W+
Sbjct: 382 AAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWI 441
Query: 137 VEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQ 196
+ ++NK+L KR+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LEQ
Sbjct: 442 LTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQ 501
Query: 197 EEYIQDGIDWAKVDFE-DNKDCLNLFEK--KPLGLLSLLDEESTFPNGTDLTFANKLKQH 253
EEY ++GI+W +DF D + C+ L E+ P G+L+LLDEE FP TD +F KL Q
Sbjct: 502 EEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQE 561
Query: 254 LNSNPCFRGE---RDKS-FTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLPQ 309
++ F+ +DK+ F + HYAG+V Y+ + +L KN D L+ + LL+ S
Sbjct: 562 QGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVA 621
Query: 310 IFASNM-----LSQSNKPVVGPLYKAGGADSQKL-SVATKFKGQLFQLMQRLESTTPHFI 363
++ L Q K L A +V +K QL +LM L +T P+F+
Sbjct: 622 DLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFV 681
Query: 364 RCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESV 423
RCI PN+ + G + LVL+QLRC GVLE +RI R GFP R+ Q+F +RY L ++
Sbjct: 682 RCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAI 741
Query: 424 AS--QDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRN-RTLHGILRVQSC 480
D + ++ + P +Y++G +K+FFR G + LE+ R+ + I+ Q+
Sbjct: 742 PKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQ 801
Query: 481 FRGHQAR 487
RG+ AR
Sbjct: 802 CRGYLAR 808
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 176/494 (35%), Positives = 277/494 (56%), Gaps = 28/494 (5%)
Query: 16 SINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVAD 75
I D E F+ +EA+ I+ ++E+Q S+ ++++VL LGN+ F N + +
Sbjct: 321 PIPAQQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN 380
Query: 76 EGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEW 135
V L+G ++ + ++ T +++VG D + + T QA +ALAK+ + LF W
Sbjct: 381 TAAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRW 440
Query: 136 LVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLE 195
++ ++NK+L KR+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LE
Sbjct: 441 ILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILE 500
Query: 196 QEEYIQDGIDWAKVDFE-DNKDCLNLFEK--KPLGLLSLLDEESTFPNGTDLTFANKLKQ 252
QEEY ++GI+W +DF D + C+ L E+ P G+L+LLDEE FP TD +F KL Q
Sbjct: 501 QEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQ 560
Query: 253 HLNSNPCFRGE---RDKS-FTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLP 308
++ F+ +DK+ F + HYAG+V Y+ + +L KN D L+ + LL+ S
Sbjct: 561 EQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSS---- 616
Query: 309 QIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATK------------FKGQLFQLMQRLE 356
F +++ ++ +VG L + L A+K +K QL +LM L
Sbjct: 617 DKFVADLWKDVDR-IVG-LDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLR 674
Query: 357 STTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYG 416
+T P+F+RCI PN+ + G + LVL+QLRC GVLE +RI R GFP R+ Q+F +RY
Sbjct: 675 NTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYE 734
Query: 417 FLLLESVAS--QDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRN-RTLHG 473
L ++ D + ++ + P +Y++G +K+FFR G + LE+ R+ +
Sbjct: 735 ILAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDV 794
Query: 474 ILRVQSCFRGHQAR 487
I+ Q+ RG+ AR
Sbjct: 795 IIAFQAQCRGYLAR 808
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 170/474 (35%), Positives = 267/474 (56%), Gaps = 27/474 (5%)
Query: 16 SINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNENHVEPVAD 75
I D E F+ +EA+ I+ ++E+Q S+ ++++VL LGN+ F N + +
Sbjct: 321 PIPAQQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDN 380
Query: 76 EGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALAKSIYACLFEW 135
V L+G ++ + ++ T +++VG D + + T QA +ALAK+ + LF W
Sbjct: 381 TAAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRW 440
Query: 136 LVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLE 195
++ ++NK+L KR+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LE
Sbjct: 441 ILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILE 500
Query: 196 QEEYIQDGIDWAKVDFE-DNKDCLNLFEK--KPLGLLSLLDEESTFPNGTDLTFANKLKQ 252
QEEY ++GI+W +DF D + C+ L E+ P G+L+LLDEE FP TD +F KL Q
Sbjct: 501 QEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQ 560
Query: 253 HLNSNPCFRGE---RDKS-FTVSHYAGEVIYDTTGFLEKNRDLLHLDSIELLSSCSCHLP 308
++ F+ +DK+ F + HYAG+V Y+ + +L KN D L+ + LL+ S
Sbjct: 561 EQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSS---- 616
Query: 309 QIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATK------------FKGQLFQLMQRLE 356
F +++ ++ +VG L + L A+K +K QL +LM L
Sbjct: 617 DKFVADLWKDVDR-IVG-LDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLR 674
Query: 357 STTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYG 416
+T P+F+RCI PN+ + G + LVL+QLRC GVLE +RI R GFP R+ Q+F +RY
Sbjct: 675 NTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYE 734
Query: 417 FLLLESVAS--QDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLEDTRN 468
L ++ D + ++ + P +Y++G +K+FFR G + LE+ R+
Sbjct: 735 ILAANAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERD 788
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 281 bits (720), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 168/475 (35%), Positives = 260/475 (54%), Gaps = 36/475 (7%)
Query: 2 SAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSF 61
+A Y+YL++S C+ ++ +DD+ +F+I+V+A++ + + + DQ S++ +LAA+L +GN++F
Sbjct: 222 NAPAYEYLKKSGCFDVSTIDDSGEFKIIVKAMETLGLKESDQNSIWRILAAILHIGNITF 281
Query: 62 TVIDNE----NHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVG----NDTIVQNLT 113
+ V+ + L A + D L +AL R + G + I +
Sbjct: 282 AEAAEQRTGTTTVKVSDTKSLAAAASCLKTDQQSLSIALCYRSISTGVGKRCEVISVPMD 341
Query: 114 LSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQ 173
+QA +RDALAK++Y LF WLV +IN + + G I ILDIYGFE F NSFEQ
Sbjct: 342 CNQAAYSRDALAKALYERLFNWLVSKINTIINCTTEK-GPVIGILDIYGFEVFQNNSFEQ 400
Query: 174 FCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLD 233
IN+ NE+LQQ F K EQEEY+++GI+W +++ +NK L EKKP+GL+SLLD
Sbjct: 401 LNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLD 460
Query: 234 EESTFPNGTDLTFANKLKQHLNSNPCF--------RGERDKSFTVSHYAGEVIYDTTGFL 285
E TD TF + + + NP R D F + HYAG+V YD GFL
Sbjct: 461 EACLIAKSTDQTFLDSICKQFEKNPHLQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFL 520
Query: 286 EKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKL--SVATK 343
+KN+D L D I S+M S S+ V G DS+K + ++
Sbjct: 521 DKNKDTLFGDLI---------------SSMQSSSDPLVQGLFPPTRPEDSKKRPETAGSQ 565
Query: 344 FKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFP 403
F+ + L+ L + +PH++RCIK N+ + G+ ++ V Q+R G+LE VR+ R+GF
Sbjct: 566 FRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRYLGLLENVRVRRAGFA 625
Query: 404 TRMSHQKFARRYGFLLLESVASQDPLS--VSVAILHQFNILPEMYQVGYTKLFFR 456
R+ + +F RY L ++ S + + + IL Q NI E ++G TK+F R
Sbjct: 626 GRIEYTRFYNRYKMLCKKTWPSFNGTAKQATELILQQHNIDKEEIRMGKTKVFIR 680
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/475 (35%), Positives = 259/475 (54%), Gaps = 36/475 (7%)
Query: 2 SAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSF 61
+A Y+YL++S C+ ++ +DD+ +F+I+V+A++ + + + DQ S++ +LAA+L +GN++F
Sbjct: 222 NAPAYEYLKKSGCFDVSTIDDSGEFKIIVKAMETLGLKESDQNSIWRILAAILHIGNITF 281
Query: 62 TVIDNE----NHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVG----NDTIVQNLT 113
+ V+ + L A + D L +AL R + G I +
Sbjct: 282 AEAAEQRTGTTTVKVSDTKSLAAAASCLKTDQQSLSIALCYRSISTGVGKRCSVISVPMD 341
Query: 114 LSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQ 173
+QA +RDALAK++Y LF WLV +IN + + G I ILDIYGFE F NSFEQ
Sbjct: 342 CNQAAYSRDALAKALYERLFNWLVSKINTIINCTTEK-GPVIGILDIYGFEVFQNNSFEQ 400
Query: 174 FCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLD 233
IN+ NE+LQQ F K EQEEY+++GI+W +++ +NK L EKKP+GL+SLLD
Sbjct: 401 LNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLD 460
Query: 234 EESTFPNGTDLTFANKLKQHLNSNPCF--------RGERDKSFTVSHYAGEVIYDTTGFL 285
E TD TF + + + NP R D F + HYAG+V YD GFL
Sbjct: 461 EACLIAKSTDQTFLDSICKQFEKNPHLQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFL 520
Query: 286 EKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKL--SVATK 343
+KN+D L D I S+M S S+ V G DS+K + ++
Sbjct: 521 DKNKDTLFGDLI---------------SSMQSSSDPLVQGLFPPTRPEDSKKRPETAGSQ 565
Query: 344 FKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFP 403
F+ + L+ L + +PH++RCIK N+ + G+ ++ V Q+R G+LE VR+ R+GF
Sbjct: 566 FRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRYLGLLENVRVRRAGFA 625
Query: 404 TRMSHQKFARRYGFLLLESVASQDPLS--VSVAILHQFNILPEMYQVGYTKLFFR 456
R+ + +F RY L ++ S + + + IL Q NI E ++G TK+F R
Sbjct: 626 GRIEYTRFYNRYKMLCKKTWPSFNGTAKQATELILQQHNIDKEEIRMGKTKVFIR 680
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 183/527 (34%), Positives = 274/527 (51%), Gaps = 31/527 (5%)
Query: 6 YKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVID 65
Y++L S + E F+ +E+L ++ S E+ S+ M++AVL GN++
Sbjct: 282 YRFLTNGPSSSPG--QERELFQETLESLRVLGFSHEEIISMLRMVSAVLQFGNIALKRER 339
Query: 66 NENHVEPVADEGLITVAKLIGCDIGELKLALSTRKMRVGNDTIVQNLTLSQATDTRDALA 125
N + + + +L+G + + AL T +++VG D + + T QA +ALA
Sbjct: 340 NTDQATMPDNTAAQKLCRLLGLGVTDFSRALLTPRIKVGRDYVQKAQTKEQADFALEALA 399
Query: 126 KSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQ 185
K+ Y LF WLV ++N++L R+ + ILDI GFE F NSFEQ CINY NE+LQQ
Sbjct: 400 KATYERLFRWLVLRLNRALDRSPRQGASFLGILDIAGFEIFQLNSFEQLCINYTNEKLQQ 459
Query: 186 HFNRHLFKLEQEEYIQDGIDWAKVDFE-DNKDCLNLFEKK--PLGLLSLLDEESTFPNGT 242
FN +F LEQEEY ++GI W +DF D + C++L E+ P GLL+LLDEE FP T
Sbjct: 460 LFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGLLALLDEECWFPKAT 519
Query: 243 DLTFANKLKQHLNSNPCF---RGERDKS-FTVSHYAGEVIYDTTGFLEKNRDLLHLDSIE 298
D +F K+ Q +P F R RD++ F+V HYAG+V Y +L KN D L+ +
Sbjct: 520 DKSFVEKVAQEQGGHPKFQRPRHLRDQADFSVLHYAGKVDYKANEWLMKNMDPLNDNVAA 579
Query: 299 LLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKL---------SVATKFKGQLF 349
LL + L + + + + +VG + D +V +K L
Sbjct: 580 LLHQSTDRL-----TAEIWKDVEGIVGLEQVSSLGDGPPGGRPRRGMFRTVGQLYKESLS 634
Query: 350 QLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQ 409
+LM L +T P F+RCI PN+ + G E LVL QLRC GVLE +RI R GFP R+ Q
Sbjct: 635 RLMATLSNTNPSFVRCIVPNHEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFPNRILFQ 694
Query: 410 KFARRYGFLLLESVAS--QDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLED-- 465
+F +RY L ++ D ++ + P +Y+VG +K+FFRAG + LE+
Sbjct: 695 EFRQRYEILTPNAIPKGFMDGKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQLEEER 754
Query: 466 ----TRNRTLHGILRVQSCFRGHQARLCLKELRRGIVALQSFIRGEK 508
T++ L + QA L ++ I ++QSF+ K
Sbjct: 755 ASEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHK 801
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 163/480 (33%), Positives = 253/480 (52%), Gaps = 28/480 (5%)
Query: 2 SAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSF 61
S ++YL + +DD F + A+ + + E++ +F ++A VL LGN+ F
Sbjct: 267 SPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDF 326
Query: 62 TVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLT 113
+ + +++ + + L A+L+G D +L+++L+TR M T+++ L
Sbjct: 327 EEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLK 386
Query: 114 LSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQ 173
+ QA + RDALAK++Y+ LF+ +V ++N+ + I +LDI GFE F+ NSFEQ
Sbjct: 387 VEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQ 444
Query: 174 FCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLD 233
FCINY NE+LQQ FN + K EQE Y ++G+ +V + DN+DC++L E + +G+L +LD
Sbjct: 445 FCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILD 504
Query: 234 EESTFPNGTDLTFAN----KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDT 281
EE+ P +D F + K K H S P R R D+ F + H+AG V Y+T
Sbjct: 505 EENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYET 564
Query: 282 TGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVA 341
T F+EKN D LH+ L S C F + S KAG +SV
Sbjct: 565 TQFVEKNNDALHMS----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVG 618
Query: 342 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 401
KFK QL L+ +L ST FIRCIKPN + +E +L QL+C G++ V+ + + G
Sbjct: 619 NKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGG 678
Query: 402 FPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIG 461
FP+R S + Y + + +A DP A+ + Y+ G TK+FFR G+
Sbjct: 679 FPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFA 738
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 163/480 (33%), Positives = 253/480 (52%), Gaps = 28/480 (5%)
Query: 2 SAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSF 61
S ++YL + +DD F + A+ + + E++ +F ++A VL LGN+ F
Sbjct: 266 SPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDF 325
Query: 62 TVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLT 113
+ + +++ + + L A+L+G D +L+++L+TR M T+++ L
Sbjct: 326 EEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLK 385
Query: 114 LSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQ 173
+ QA + RDALAK++Y+ LF+ +V ++N+ + I +LDI GFE F+ NSFEQ
Sbjct: 386 VEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQ 443
Query: 174 FCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLD 233
FCINY NE+LQQ FN + K EQE Y ++G+ +V + DN+DC++L E + +G+L +LD
Sbjct: 444 FCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILD 503
Query: 234 EESTFPNGTDLTFAN----KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDT 281
EE+ P +D F + K K H S P R R D+ F + H+AG V Y+T
Sbjct: 504 EENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYET 563
Query: 282 TGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVA 341
T F+EKN D LH+ L S C F + S KAG +SV
Sbjct: 564 TQFVEKNNDALHMS----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVG 617
Query: 342 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 401
KFK QL L+ +L ST FIRCIKPN + +E +L QL+C G++ V+ + + G
Sbjct: 618 NKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGG 677
Query: 402 FPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIG 461
FP+R S + Y + + +A DP A+ + Y+ G TK+FFR G+
Sbjct: 678 FPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFA 737
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 163/480 (33%), Positives = 253/480 (52%), Gaps = 28/480 (5%)
Query: 2 SAKEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSF 61
S ++YL + +DD F + A+ + + E++ +F ++A VL LGN+ F
Sbjct: 266 SPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDF 325
Query: 62 TVIDNEN---HVEPVADEGLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLT 113
+ + +++ + + L A+L+G D +L+++L+TR M T+++ L
Sbjct: 326 EEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLK 385
Query: 114 LSQATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQ 173
+ QA + RDALAK++Y+ LF+ +V ++N+ + I +LDI GFE F+ NSFEQ
Sbjct: 386 VEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQ 443
Query: 174 FCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLD 233
FCINY NE+LQQ FN + K EQE Y ++G+ +V + DN+DC++L E + +G+L +LD
Sbjct: 444 FCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILD 503
Query: 234 EESTFPNGTDLTFAN----KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDT 281
EE+ P +D F + K K H S P R R D+ F + H+AG V Y+T
Sbjct: 504 EENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYET 563
Query: 282 TGFLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVA 341
T F+EKN D LH+ L S C F + S KAG +SV
Sbjct: 564 TQFVEKNNDALHMS----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVG 617
Query: 342 TKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSG 401
KFK QL L+ +L ST FIRCIKPN + +E +L QL+C G++ V+ + + G
Sbjct: 618 NKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGG 677
Query: 402 FPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIG 461
FP+R S + Y + + +A DP A+ + Y+ G TK+FFR G+
Sbjct: 678 FPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFA 737
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 252 bits (644), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 165/481 (34%), Positives = 255/481 (53%), Gaps = 29/481 (6%)
Query: 4 KEYKYLRQSSCYSINGVDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTV 63
K +YL+ S G+DD F + A+ + + E++ +F ++A VL LGN+ F
Sbjct: 295 KSPEYLKAGSLKD-PGLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEE 353
Query: 64 IDNEN---HVEPVADEGLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLS 115
+ + +++ + + L A+L+G D +L+++L+TR M T+++ L +
Sbjct: 354 AGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVE 413
Query: 116 QATDTRDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFC 175
QA + RDALAK++Y+ LF+ +V ++N+ + I +LDI GFE F+ NSFEQFC
Sbjct: 414 QANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFC 471
Query: 176 INYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLDEE 235
INY NE+LQQ FN + K EQE Y ++G+ +V + DN+DC++L E + +G+L +LDEE
Sbjct: 472 INYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEE 531
Query: 236 STFPNGTDLTFAN----KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDTTG 283
+ P +D F + K K H S P R R D+ F + H+AG V Y+TT
Sbjct: 532 NRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQ 591
Query: 284 FLEKNRDLLHLDSIELLSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATK 343
F+EKN D LH+ L S C F + S KAG +SV K
Sbjct: 592 FVEKNNDALHMS----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNK 645
Query: 344 FKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFP 403
FK QL L+ +L ST FIRCIKPN + +E +L QL+C G++ V+ + + GFP
Sbjct: 646 FKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFP 705
Query: 404 TRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGML 463
+R S + Y + + +A DP A+ + Y+ G TK+FFR G+
Sbjct: 706 SRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEF 765
Query: 464 E 464
+
Sbjct: 766 D 766
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 247/462 (53%), Gaps = 28/462 (6%)
Query: 20 VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNEN---HVEPVADE 76
+DD F + A+ + + E++ +F ++A VL LGN+ F + + +++ + +
Sbjct: 311 LDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQ 370
Query: 77 GLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLSQATDTRDALAKSIYAC 131
L A+L+G D +L+++L+TR M T+++ L + QA + RDALAK++Y+
Sbjct: 371 ALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSH 430
Query: 132 LFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHL 191
LF+ +V ++N+ + I +LDI GFE F+ NSFEQFCINY NE+LQQ FN +
Sbjct: 431 LFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERI 488
Query: 192 FKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFAN--- 248
K EQE Y ++G+ +V + DN+DC++L E + +G+L +LDEE+ P +D F +
Sbjct: 489 LKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVH 548
Query: 249 -KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
K K H S P R R D+ F + H+AG V Y+TT F+EKN D LH+
Sbjct: 549 QKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS---- 604
Query: 300 LSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLESTT 359
L S C F + S KAG +SV KFK QL L+ +L ST
Sbjct: 605 LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKLRSTG 662
Query: 360 PHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLL 419
FIRCIKPN + +E +L QL+C G++ V+ + + GFP+R S + Y +
Sbjct: 663 ASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYM 722
Query: 420 LESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIG 461
+ +A DP A+ + Y+ G TK+FFR G+
Sbjct: 723 PDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFA 764
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 247/462 (53%), Gaps = 28/462 (6%)
Query: 20 VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNEN---HVEPVADE 76
+DD F + A+ + + E++ +F ++A VL LGN+ F + + +++ + +
Sbjct: 310 LDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQ 369
Query: 77 GLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLSQATDTRDALAKSIYAC 131
L A+L+G D +L+++L+TR M T+++ L + QA + RDALAK++Y+
Sbjct: 370 ALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSH 429
Query: 132 LFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHL 191
LF+ +V ++N+ + I +LDI GFE F+ NSFEQFCINY NE+LQQ FN +
Sbjct: 430 LFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERI 487
Query: 192 FKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFAN--- 248
K EQE Y ++G+ +V + DN+DC++L E + +G+L +LDEE+ P +D F +
Sbjct: 488 LKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVH 547
Query: 249 -KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
K K H S P R R D+ F + H+AG V Y+TT F+EKN D LH+
Sbjct: 548 QKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS---- 603
Query: 300 LSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLESTT 359
L S C F + S KAG +SV KFK QL L+ +L ST
Sbjct: 604 LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKLRSTG 661
Query: 360 PHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLL 419
FIRCIKPN + +E +L QL+C G++ V+ + + GFP+R S + Y +
Sbjct: 662 ASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYM 721
Query: 420 LESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIG 461
+ +A DP A+ + Y+ G TK+FFR G+
Sbjct: 722 PDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFA 763
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 247/462 (53%), Gaps = 28/462 (6%)
Query: 20 VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNEN---HVEPVADE 76
+DD F + A+ + + E++ +F ++A VL LGN+ F + + +++ + +
Sbjct: 310 LDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQ 369
Query: 77 GLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLSQATDTRDALAKSIYAC 131
L A+L+G D +L+++L+TR M T+++ L + QA + RDALAK++Y+
Sbjct: 370 ALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSH 429
Query: 132 LFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHL 191
LF+ +V ++N+ + I +LDI GFE F+ NSFEQFCINY NE+LQQ FN +
Sbjct: 430 LFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERI 487
Query: 192 FKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFAN--- 248
K EQE Y ++G+ +V + DN+DC++L E + +G+L +LDEE+ P +D F +
Sbjct: 488 LKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVH 547
Query: 249 -KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
K K H S P R R D+ F + H+AG V Y+TT F+EKN D LH+
Sbjct: 548 QKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS---- 603
Query: 300 LSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLESTT 359
L S C F + S KAG +SV KFK QL L+ +L ST
Sbjct: 604 LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKLRSTG 661
Query: 360 PHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLL 419
FIRCIKPN + +E +L QL+C G++ V+ + + GFP+R S + Y +
Sbjct: 662 ASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYM 721
Query: 420 LESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIG 461
+ +A DP A+ + Y+ G TK+FFR G+
Sbjct: 722 PDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFA 763
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 247/462 (53%), Gaps = 28/462 (6%)
Query: 20 VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNEN---HVEPVADE 76
+DD F + A+ + + E++ +F ++A VL LGN+ F + + +++ + +
Sbjct: 307 LDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQ 366
Query: 77 GLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLSQATDTRDALAKSIYAC 131
L A+L+G D +L+++L+TR M T+++ L + QA + RDALAK++Y+
Sbjct: 367 ALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSH 426
Query: 132 LFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHL 191
LF+ +V ++N+ + I +LDI GFE F+ NSFEQFCINY NE+LQQ FN +
Sbjct: 427 LFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERI 484
Query: 192 FKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFAN--- 248
K EQE Y ++G+ +V + DN+DC++L E + +G+L +LDEE+ P +D F +
Sbjct: 485 LKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVH 544
Query: 249 -KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
K K H S P R R D+ F + H+AG V Y+TT F+EKN D LH+
Sbjct: 545 QKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS---- 600
Query: 300 LSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLESTT 359
L S C F + S KAG +SV KFK QL L+ +L ST
Sbjct: 601 LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKLRSTG 658
Query: 360 PHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLL 419
FIRCIKPN + +E +L QL+C G++ V+ + + GFP+R S + Y +
Sbjct: 659 ASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYM 718
Query: 420 LESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIG 461
+ +A DP A+ + Y+ G TK+FFR G+
Sbjct: 719 PDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFA 760
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 247/462 (53%), Gaps = 28/462 (6%)
Query: 20 VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNEN---HVEPVADE 76
+DD F + A+ + + E++ +F ++A VL LGN+ F + + +++ + +
Sbjct: 320 LDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQ 379
Query: 77 GLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLSQATDTRDALAKSIYAC 131
L A+L+G D +L+++L+TR M T+++ L + QA + RDALAK++Y+
Sbjct: 380 ALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSH 439
Query: 132 LFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHL 191
LF+ +V ++N+ + I +LDI GFE F+ NSFEQFCINY NE+LQQ FN +
Sbjct: 440 LFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERI 497
Query: 192 FKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFAN--- 248
K EQE Y ++G+ +V + DN+DC++L E + +G+L +LDEE+ P +D F +
Sbjct: 498 LKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVH 557
Query: 249 -KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
K K H S P R R D+ F + H+AG V Y+TT F+EKN D LH+
Sbjct: 558 QKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS---- 613
Query: 300 LSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLESTT 359
L S C F + S KAG +SV KFK QL L+ +L ST
Sbjct: 614 LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKLRSTG 671
Query: 360 PHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLL 419
FIRCIKPN + +E +L QL+C G++ V+ + + GFP+R S + Y +
Sbjct: 672 ASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYM 731
Query: 420 LESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIG 461
+ +A DP A+ + Y+ G TK+FFR G+
Sbjct: 732 PDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFA 773
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 247/462 (53%), Gaps = 28/462 (6%)
Query: 20 VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNEN---HVEPVADE 76
+DD F + A+ + + E++ +F ++A VL LGN+ F + + +++ + +
Sbjct: 308 LDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQ 367
Query: 77 GLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLSQATDTRDALAKSIYAC 131
L A+L+G D +L+++L+TR M T+++ L + QA + RDALAK++Y+
Sbjct: 368 ALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSH 427
Query: 132 LFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHL 191
LF+ +V ++N+ + I +LDI GFE F+ NSFEQFCINY NE+LQQ FN +
Sbjct: 428 LFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERI 485
Query: 192 FKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFAN--- 248
K EQE Y ++G+ +V + DN+DC++L E + +G+L +LDEE+ P +D F +
Sbjct: 486 LKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVH 545
Query: 249 -KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
K K H S P R R D+ F + H+AG V Y+TT F+EKN D LH+
Sbjct: 546 QKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS---- 601
Query: 300 LSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLESTT 359
L S C F + S KAG +SV KFK QL L+ +L ST
Sbjct: 602 LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKLRSTG 659
Query: 360 PHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLL 419
FIRCIKPN + +E +L QL+C G++ V+ + + GFP+R S + Y +
Sbjct: 660 ASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYM 719
Query: 420 LESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIG 461
+ +A DP A+ + Y+ G TK+FFR G+
Sbjct: 720 PDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFA 761
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 244/462 (52%), Gaps = 28/462 (6%)
Query: 20 VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNEN---HVEPVADE 76
+DD F + A+ + + E++ +F ++A VL LGN+ F + + +++ + +
Sbjct: 320 LDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQ 379
Query: 77 GLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLSQATDTRDALAKSIYAC 131
L A+L+G D +L+++L+TR M T+++ L + QA + RDALAK++Y+
Sbjct: 380 ALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSH 439
Query: 132 LFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHL 191
LF+ +V ++N+ + I +LDI GFE F+ NSFEQFCINY NE+LQQ FN +
Sbjct: 440 LFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERI 497
Query: 192 FKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLK 251
K EQE Y ++G+ +V + DN+DC++L E + +G+L +LDEE+ P +D F + +
Sbjct: 498 LKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVH 557
Query: 252 QHLNSNPCFRGER------------DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
Q + R D+ F + H+AG V Y+TT F+EKN D LH+
Sbjct: 558 QKHKDHFRLSIPRKSKLAIHENIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS---- 613
Query: 300 LSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLESTT 359
L S C F + S KAG +SV KFK QL L+ +L ST
Sbjct: 614 LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKLRSTG 671
Query: 360 PHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLL 419
FIRCIKPN + +E +L QL+C G++ V+ + + GFP+R S + Y +
Sbjct: 672 ASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYM 731
Query: 420 LESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIG 461
+ +A DP A+ + Y+ G TK+FFR G+
Sbjct: 732 PDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFA 773
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 248/465 (53%), Gaps = 28/465 (6%)
Query: 20 VDDAEQFRIVVEALDIVHVSKEDQESVFAMLAAVLWLGNVSFTVIDNEN---HVEPVADE 76
+DD F + A+ + + E++ +F ++A VL LGN+ F + + +++ + +
Sbjct: 311 LDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQ 370
Query: 77 GLITVAKLIGCDIGELKLALSTRKMRV----GNDTIVQ-NLTLSQATDTRDALAKSIYAC 131
L A+L+G D +L+++L+TR M T+++ L + QA + RDALAK++Y+
Sbjct: 371 ALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSH 430
Query: 132 LFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHL 191
LF+ +V ++N+ + I +LDI GFE F+ NSFEQFCINY NE+LQQ FN +
Sbjct: 431 LFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERI 488
Query: 192 FKLEQEEYIQDGIDWAKVDFEDNKDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFAN--- 248
K EQE Y ++G+ +V + DN+DC++L E + +G+L +LDEE+ P +D F +
Sbjct: 489 LKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVH 548
Query: 249 -KLKQHLN-SNP------CFRGER-DKSFTVSHYAGEVIYDTTGFLEKNRDLLHLDSIEL 299
K K H S P R R D+ F + H+AG V Y+TT F+EKN D LH+
Sbjct: 549 QKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMS---- 604
Query: 300 LSSCSCHLPQIFASNMLSQSNKPVVGPLYKAGGADSQKLSVATKFKGQLFQLMQRLESTT 359
L S C F + S KAG +SV KFK QL L+ +L ST
Sbjct: 605 LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSF--ISVGNKFKTQLNLLLDKLRSTG 662
Query: 360 PHFIRCIKPNNFQSPGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLL 419
FIRCIKPN + +E +L QL+C G++ V+ + + GFP+R S + Y +
Sbjct: 663 ASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYM 722
Query: 420 LESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGMLE 464
+ +A DP A+ + Y+ G TK+FFR G+ +
Sbjct: 723 PDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 767
>pdb|3ODT|A Chain A, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1
pdb|3ODT|B Chain B, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1
Length = 313
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 483 GHQARLCLKELRRGIVALQSFIRGEKIRKEYALV--LQRHRAAV 524
GHQ +C + G+V S+ + K+ KE +LV LQ H A+V
Sbjct: 102 GHQGNVCSLSFQDGVVISGSWDKTAKVWKEGSLVYNLQAHNASV 145
>pdb|2IX7|C Chain C, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 58
Score = 30.4 bits (67), Expect = 4.4, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 492 ELRRGIVALQSFIRGEKIRKEYALVLQRHRAAVVIQRQIKSRVAR 536
+LR + +Q IRG +RK Y L RAA+ +QR ++ AR
Sbjct: 3 KLRAACIRIQKTIRGWLLRKRY---LCMQRAAITVQRYVRGYQAR 44
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,335,569
Number of Sequences: 62578
Number of extensions: 835499
Number of successful extensions: 2189
Number of sequences better than 100.0: 65
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1787
Number of HSP's gapped (non-prelim): 85
length of query: 793
length of database: 14,973,337
effective HSP length: 107
effective length of query: 686
effective length of database: 8,277,491
effective search space: 5678358826
effective search space used: 5678358826
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)