Query 003831
Match_columns 792
No_of_seqs 255 out of 760
Neff 4.8
Searched_HMMs 46136
Date Thu Mar 28 12:50:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003831.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003831hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00151 potassium transporter 100.0 3E-258 6E-263 2186.4 68.0 772 12-792 63-852 (852)
2 PLN00150 potassium ion transpo 100.0 9E-257 2E-261 2175.0 67.7 768 12-792 8-779 (779)
3 PLN00148 potassium transporter 100.0 5E-253 1E-257 2145.1 65.7 746 44-792 15-785 (785)
4 PLN00149 potassium transporter 100.0 3E-252 6E-257 2141.0 68.0 749 41-792 11-779 (779)
5 TIGR00794 kup potassium uptake 100.0 4E-230 8E-235 1947.3 60.5 687 53-792 1-688 (688)
6 PRK10745 trkD potassium transp 100.0 4E-207 9E-212 1734.7 53.4 606 52-792 11-622 (622)
7 PF02705 K_trans: K+ potassium 100.0 7E-198 1E-202 1648.3 42.0 532 54-625 1-534 (534)
8 COG3158 Kup K+ transporter [In 100.0 6E-192 1E-196 1575.2 51.5 610 50-792 15-627 (627)
9 TIGR00911 2A0308 L-type amino 91.1 0.53 1.1E-05 54.3 7.4 87 220-310 165-255 (501)
10 COG0531 PotE Amino acid transp 81.6 10 0.00022 42.6 10.6 177 219-401 133-324 (466)
11 TIGR00909 2A0306 amino acid tr 78.4 22 0.00048 39.9 12.0 169 220-401 133-316 (429)
12 PF13520 AA_permease_2: Amino 76.1 6.7 0.00015 43.7 7.1 247 196-458 91-367 (426)
13 TIGR03813 put_Glu_GABA_T putat 74.8 36 0.00078 39.1 12.7 19 501-519 434-452 (474)
14 TIGR00907 2A0304 amino acid pe 74.3 22 0.00047 40.9 10.7 24 501-524 454-477 (482)
15 TIGR00930 2a30 K-Cl cotranspor 74.1 1.2E+02 0.0026 38.8 17.9 25 220-244 203-227 (953)
16 PRK10655 potE putrescine trans 67.0 62 0.0014 36.6 12.2 43 222-264 125-170 (438)
17 PRK10435 cadB lysine/cadaverin 66.9 82 0.0018 35.9 13.2 23 223-245 124-146 (435)
18 PRK15049 L-asparagine permease 64.0 44 0.00096 39.0 10.5 22 223-244 147-168 (499)
19 PF14362 DUF4407: Domain of un 58.0 80 0.0017 34.4 10.6 54 440-493 13-70 (301)
20 TIGR00908 2A0305 ethanolamine 56.2 66 0.0014 36.5 9.9 24 222-245 123-146 (442)
21 KOG3145 Cystine transporter Cy 53.1 20 0.00043 39.9 4.8 40 285-325 287-343 (372)
22 TIGR00906 2A0303 cationic amin 48.6 2.6E+02 0.0057 33.4 13.6 45 220-264 161-208 (557)
23 PF06570 DUF1129: Protein of u 48.1 74 0.0016 33.0 8.0 21 500-520 179-199 (206)
24 PRK11357 frlA putative fructos 45.7 2.4E+02 0.0052 32.1 12.3 45 221-265 128-175 (445)
25 PRK10249 phenylalanine transpo 45.1 1.3E+02 0.0028 34.7 10.1 102 223-326 138-247 (458)
26 PRK11021 putative transporter; 44.1 4.2E+02 0.0091 29.8 13.8 27 220-246 115-141 (410)
27 COG4059 MtrE Tetrahydromethano 40.5 25 0.00054 37.6 3.1 29 498-526 259-287 (304)
28 PRK10746 putative transport pr 40.1 1.9E+02 0.0042 33.4 10.5 31 43-79 10-40 (461)
29 TIGR00905 2A0302 transporter, 40.0 73 0.0016 36.7 7.1 43 359-401 278-320 (473)
30 PRK10238 aromatic amino acid t 39.4 1.6E+02 0.0034 33.9 9.7 43 296-339 206-250 (456)
31 TIGR03810 arg_ornith_anti argi 37.1 4.2E+02 0.0092 30.5 12.7 45 358-402 273-317 (468)
32 PRK11387 S-methylmethionine tr 36.9 2.2E+02 0.0047 32.9 10.3 30 43-78 14-43 (471)
33 PRK10644 arginine:agmatin anti 34.9 1.4E+02 0.0029 34.2 8.2 23 222-244 127-149 (445)
34 TIGR00910 2A0307_GadC glutamat 34.2 3.3E+02 0.0071 32.1 11.3 46 298-343 202-249 (507)
35 PRK10580 proY putative proline 32.2 2.4E+02 0.0052 32.4 9.6 24 499-522 423-446 (457)
36 PRK11049 D-alanine/D-serine/gl 29.7 5.1E+02 0.011 29.9 11.8 104 297-401 218-332 (469)
37 COG2179 Predicted hydrolase of 28.9 13 0.00028 38.2 -1.1 67 721-788 48-118 (175)
38 TIGR01773 GABAperm gamma-amino 27.9 9.5E+02 0.021 27.4 13.7 25 222-246 128-152 (452)
39 KOG3643 GABA receptor [Signal 27.1 45 0.00098 38.9 2.6 90 395-488 225-324 (459)
40 TIGR03428 ureacarb_perm permea 24.1 1.1E+03 0.025 27.1 15.3 25 220-244 144-168 (475)
41 PF00324 AA_permease: Amino ac 22.5 63 0.0014 37.1 2.7 34 293-326 203-238 (478)
42 PF05545 FixQ: Cbb3-type cytoc 22.3 76 0.0016 25.7 2.4 28 510-537 20-47 (49)
43 cd05900 Ig_Aggrecan Immunoglob 20.8 1.3E+02 0.0028 28.5 4.0 30 599-628 73-102 (112)
44 TIGR01940 nqrE NADH:ubiquinone 20.5 3.1E+02 0.0067 29.1 7.0 47 421-467 14-62 (200)
45 COG1230 CzcD Co/Zn/Cd efflux s 20.5 4.7E+02 0.01 29.3 8.7 164 303-535 44-219 (296)
No 1
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=2.6e-258 Score=2186.44 Aligned_cols=772 Identities=48% Similarity=0.854 Sum_probs=702.4
Q ss_pred ccccccceeccccCCCCcchhhhhcccc--cccccccHHHHHHHHHhhcceeecccccchhhhhhcccCC-CCCCcCcEe
Q 003831 12 ETNKGSMWVLDQKLDQPMDEEAGRLRNM--YREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPH-GIDDPEDII 88 (792)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~La~~alGVVyGDIGTSPLYv~~~~f~~-~~~~~~~vl 88 (792)
+..++||||+++++|+ ++.|+++++++ |+.++.++|.++.|||||+|||||||||||||||+++|++ +.+++|||+
T Consensus 63 ~~~~~~~~~~~~~~d~-~~~e~~~~~~~~~~~~~~~~~w~~l~La~qslGVVyGDIGTSPLYv~~s~F~~~~~~~~~dIl 141 (852)
T PLN00151 63 GNMRRRLIRTPPRVDS-FDVEAMEIPGAHRHDSEDLSVGRTLALAFQTLGVVFGDVGTSPLYTFSVMFSKVPIKSEEDVL 141 (852)
T ss_pred cchhhhHhhCCCccch-hhhcccccccccccccccccHHHHHHHHHhhhceEeCcCCCCHHHHHHHHhcCCCCCChhhee
Confidence 4457899999999999 99999998877 4456778888899999999999999999999999999977 347999999
Q ss_pred hhHHHHHHHHHHhhhheeeEEEEeecCCCCChHHHHHHHhhccccccccCCCCCCchhhhhccccccc-cchhhhHHHHH
Q 003831 89 GALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFH-EKSFAAKTKRW 167 (792)
Q Consensus 89 GvlSLIfWtLtliv~iKYv~ivL~Adn~GEGG~fALysLl~r~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~ 167 (792)
|+|||||||||||+++|||+|||||||||||||||||||+|||+|++++||||++|+++|+|+.+.++ +.+++.++|++
T Consensus 142 GvLSLIfWtLtLiv~iKYV~iVLrAdd~GEGGtfALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~ 221 (852)
T PLN00151 142 GALSLVLYTLILIPLAKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKER 221 (852)
T ss_pred eehHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988766 77778899999
Q ss_pred hhhhhhhHHHHHHHHhHhhhhhhcCccccchhhhhhhhccccccCCCCCCceEehhHHHHHHHHHhhhcccccccccchh
Q 003831 168 LEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFA 247 (792)
Q Consensus 168 le~~~~~~~~l~~l~l~G~sm~~gDGviTPAISVLSAVeGl~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~Fg 247 (792)
||+|+++|.+++++|++|+||+|||||||||||||||||||+++.|++++++||||||+||++||++||+||+|||++||
T Consensus 222 lE~s~~~k~~ll~l~l~GtamviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~Fg 301 (852)
T PLN00151 222 LETSSLLKKLLLLLVLAGTSMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFG 301 (852)
T ss_pred hhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhc
Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhcCcceeeeecceeeeeccccccccCCCCCCCcceehhhhH
Q 003831 248 PIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTV 327 (792)
Q Consensus 248 PIm~vWfl~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Ir~aw~~ 327 (792)
|||++||++|+++|+|||++|||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||++
T Consensus 302 PImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~ 381 (852)
T PLN00151 302 PALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTC 381 (852)
T ss_pred cHHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccchhhhcccCccccccccccccCcchHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEec
Q 003831 328 VVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHT 407 (792)
Q Consensus 328 ~V~P~L~L~Y~GQgA~ll~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hT 407 (792)
+|||||+|||+||||||++||++++||||+++|+|++||+|++||+||||||||+|||+||+++||++||||||+||+||
T Consensus 382 ~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHT 461 (852)
T PLN00151 382 LVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHT 461 (852)
T ss_pred hHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCceeehhhHHHHHHHhhheeEeecCchhhhhhhhchhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 003831 408 SKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVEC 487 (792)
Q Consensus 408 S~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiAV~~~M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~ie~ 487 (792)
|++++||||||+|||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|+++|+++|+
T Consensus 462 S~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~ 541 (852)
T PLN00151 462 SRKFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVEL 541 (852)
T ss_pred CCccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHHHHhcCCChHHHHhcCCCCCCceecceEEEEecCCCCchh
Q 003831 488 TYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPH 567 (792)
Q Consensus 488 ~f~sa~l~Kv~~GGW~pl~la~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~ 567 (792)
+|||||+.||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.+++||||+|+|||++.+|+|+
T Consensus 542 ~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~ 621 (852)
T PLN00151 542 VFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPA 621 (852)
T ss_pred HHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999899999999999999999999
Q ss_pred hHHHHhhhCCccceEEEEEEEEEeeccccCCCceEEEEEecCCCCCEEEEEEEeecccCCC-ChHHHHHHHHHHHHHHHH
Q 003831 568 IFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHK-KDENFEKKLFDSLFLFVR 646 (792)
Q Consensus 568 ~~~h~l~~~~~lh~~~Vfl~i~~~~vP~V~~~eR~~v~~~~~~~~~~yr~~~ryGy~d~~~-~~~~fe~~lv~~L~~FI~ 646 (792)
+|.||++|||++||++||||||++|+|+||++|||+++|+++++|++|||++||||||..+ ++++||++|+++|++|||
T Consensus 622 ~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~ 701 (852)
T PLN00151 622 IFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIR 701 (852)
T ss_pred HHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999976 789999999999999999
Q ss_pred hhhhccCCCC---CC-------CccccccccccccccccCC--CCCCCCCCccccccccCCC-CCcCCCccccccccCcc
Q 003831 647 LEAMMEGCSD---SD-------EYSLYGQQTLQSTDGLLNN--NGNSTSSNQDLTMSSVDSI-VPVKSPLHVNSTVMSSS 713 (792)
Q Consensus 647 ~e~~~~~~~~---~~-------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~s~~~-~~~~~~~~f~~~~~~~~ 713 (792)
+|+.....++ ++ +++..........+..... ......+........+.+. .+..++++|. +
T Consensus 702 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 775 (852)
T PLN00151 702 REAQERALESDGNDDTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMSS------D 775 (852)
T ss_pred hhhhhccccccccccccccccccccccccCCCccccccccccccccccccccccccccccccccccccccccc------c
Confidence 9874321110 00 1111100000000000000 0000000000000000000 0001222321 1
Q ss_pred cCCCcchHHHHHHHHHhHhcCcEEEeeecEEEecCCCchhHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 003831 714 QMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 792 (792)
Q Consensus 714 ~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~vkak~~Ss~lKK~vIn~~Y~FLRkN~R~~~~~L~IPh~~LlEVGMvYeV 792 (792)
. +++++||+++|++|+|+||+||+||++||||++|+|+||++||++|+|||||||+|.++|+|||++|+||||+|||
T Consensus 776 ~--~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 776 E--DQSLEYELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred c--CccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 1 5688999999999999999999999999999999999999999999999999999999999999999999999997
No 2
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=8.6e-257 Score=2174.95 Aligned_cols=768 Identities=57% Similarity=1.003 Sum_probs=702.9
Q ss_pred ccccccceeccccCCCCcchhhhhcccccccccccHHHHHHHHHhhcceeecccccchhhhhhcccCC-CCCCcCcEehh
Q 003831 12 ETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPH-GIDDPEDIIGA 90 (792)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~La~~alGVVyGDIGTSPLYv~~~~f~~-~~~~~~~vlGv 90 (792)
|.+++||||+++++|+|+|+||++++++++.++.+|+.++.|||||+|||||||||||||||+++|++ +.+++|||+|+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~ilGv 87 (779)
T PLN00150 8 ESNQGRLWDLDQRITRPLGVDADSVRSMYFSSPNWPKVIMHLAYQSLGVVYGDLGTSPLYVFKSTFANVGVKNNDDIIGA 87 (779)
T ss_pred CCCccchhhCCCCCCCccCcchhhcccccccccccHHHHHHHHHhccCeEeCcCccchHHHHHHHhcCCCCCCHHHhHhH
Confidence 45689999999999999999999999998788999999999999999999999999999999999976 46899999999
Q ss_pred HHHHHHHHHHhhhheeeEEEEeecCCCCChHHHHHHHhhccccccccCCCCCCchhhhhccccccccchhhhHHHHHhhh
Q 003831 91 LSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEH 170 (792)
Q Consensus 91 lSLIfWtLtliv~iKYv~ivL~Adn~GEGG~fALysLl~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~ 170 (792)
|||||||||||+++|||+|||||||||||||||||||+|||+|++++|||++.|+++++|++. +..+..++|++||+
T Consensus 88 LSLIfWtLtLiv~iKYV~ivLrAdn~GEGGtfALysLl~r~aki~l~~~~~~~~~~~s~~~~~---~~~r~~~~k~~lE~ 164 (779)
T PLN00150 88 LSLIIYTLTIIPLIKYVFIVLRANDNGEGGSFALYSLLCRYCNISLLPNQHPTDVELTTYVVD---NMNRKTRIQRKLEN 164 (779)
T ss_pred HHHHHHHHHHHHHHhheeEEEEccCCCCcchhhHHHHHhhhcccccCCccccchhhhhhcccc---cchhhhHHHHhhhc
Confidence 999999999999999999999999999999999999999999999999999999999999863 33344679999999
Q ss_pred hhhhHHHHHHHHhHhhhhhhcCccccchhhhhhhhccccccCCCCCCceEehhHHHHHHHHHhhhcccccccccchhhHH
Q 003831 171 QTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIV 250 (792)
Q Consensus 171 ~~~~~~~l~~l~l~G~sm~~gDGviTPAISVLSAVeGl~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIm 250 (792)
|+.+|++++++|++|+||+|||||||||||||||||||++..|++++++||||||+||++||++||+||+|||++|||||
T Consensus 165 ~~~~~~~l~~l~l~G~~m~~gDgviTPAISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIm 244 (779)
T PLN00150 165 SRVWQNVLLLIVLLGTCMVIGDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAPIF 244 (779)
T ss_pred chHHHHHHHHHHHHHHHHHhcccccccchhhhhhhccccccCCCCCCCeehhhHHHHHHHHHHHHhccchhhhhhhccHH
Confidence 99999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhcCcceeeeecceeeeeccccccccCCCCCCCcceehhhhHHHH
Q 003831 251 LLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVF 330 (792)
Q Consensus 251 ~vWfl~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Ir~aw~~~V~ 330 (792)
++||++||++|+|||++|||+||+|+||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++||
T Consensus 245 ~~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~~V~ 324 (779)
T PLN00150 245 LCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTSLVY 324 (779)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHhhcCHHHHHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceeeeehhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccchhhhcccCccccccccccccCcchHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEecCCc
Q 003831 331 PCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKK 410 (792)
Q Consensus 331 P~L~L~Y~GQgA~ll~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hTS~~ 410 (792)
|||+|||+||||||++||++++||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++
T Consensus 325 P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS~~ 404 (779)
T PLN00150 325 PCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNK 404 (779)
T ss_pred HHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceeehhhHHHHHHHhhheeEeecCchhhhhhhhchhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 003831 411 FLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYF 490 (792)
Q Consensus 411 ~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiAV~~~M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~ie~~f~ 490 (792)
++||||||+|||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|+++|+++|++||
T Consensus 405 ~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~f~ 484 (779)
T PLN00150 405 VHGQVYIPEINWILMVLCLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYF 484 (779)
T ss_pred cCCceeeHHHHHHHHHHHHhheEEecChHHHHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHHHHhcCCChHHHHhcCCCCCCceecceEEEEecCCCCchhhHH
Q 003831 491 SAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFS 570 (792)
Q Consensus 491 sa~l~Kv~~GGW~pl~la~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~ 570 (792)
|||+.||+||||+||++|++++++|++||||++++++++.+|++|++++.++.++.++.||||+|+|||++++|+|++|.
T Consensus 485 sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~ 564 (779)
T PLN00150 485 SAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPPLFS 564 (779)
T ss_pred HHHHhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999998888888889999999999999999999999
Q ss_pred HHhhhCCccceEEEEEEEEEeeccccCCCceEEEEEecCCCCCEEEEEEEeecccCCCChHHHHHHHHHHHHHHHHhhhh
Q 003831 571 HFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAM 650 (792)
Q Consensus 571 h~l~~~~~lh~~~Vfl~i~~~~vP~V~~~eR~~v~~~~~~~~~~yr~~~ryGy~d~~~~~~~fe~~lv~~L~~FI~~e~~ 650 (792)
||++|||++||++||+|||++|+|+||++||++++|+++++|++|||++||||||..+++++||++|+++|++|||+|+.
T Consensus 565 h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~vvryGy~d~~~d~~dFE~~LvesL~~FIr~e~~ 644 (779)
T PLN00150 565 HFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLEKKDDNFEQLLIASLERFIEIESF 644 (779)
T ss_pred HHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcCcccchHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999998899999999999999988999999999999999999974
Q ss_pred ccCCCCCCCccccccccccccccccCC-CC--CCCCCCccccccccCCCCCcCCCccccccccCcccCCCcchHHHHHHH
Q 003831 651 MEGCSDSDEYSLYGQQTLQSTDGLLNN-NG--NSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFL 727 (792)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~s~~~~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L 727 (792)
..+.+ +++++.....++...+ ..+. .. +..........+.++...+..++++|. +. +++++||+++|
T Consensus 645 ~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--~~~v~eEl~~L 714 (779)
T PLN00150 645 REQSD-LESMAASWTPEELMGE-GNSVGSGLFTQYDQSDINFATSQEWKRPSSQEDSVS------GH--SSDTQDEVAFL 714 (779)
T ss_pred ccccc-cccccccccccccccc-CCcccccccccccccccccccccccccccccccccc------cc--cccHHHHHHHH
Confidence 32211 1122222110000000 0000 00 000000000000000000111222321 11 56889999999
Q ss_pred HHhHhcCcEEEeeecEEEecCCCchhHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 003831 728 NSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 792 (792)
Q Consensus 728 ~~A~eaGVvYIlG~~~vkak~~Ss~lKK~vIn~~Y~FLRkN~R~~~~~L~IPh~~LlEVGMvYeV 792 (792)
++|+|+||+||+||++||||++|||+||++||++|+|||||||+|.+.|+|||+||+||||+|||
T Consensus 715 ~~A~eaGVvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 715 NKCKEAGVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred HHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCCccccCCChHHeEEeceEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999997
No 3
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=5e-253 Score=2145.05 Aligned_cols=746 Identities=52% Similarity=0.924 Sum_probs=682.0
Q ss_pred cccHHH---HHHHHHhhcceeecccccchhhhhhcccCCC---CCCcCcEehhHHHHHHHHHHhhhheeeEEEEeecCCC
Q 003831 44 KFSSLL---LLRFAFQSLGVVYGDLGTSPLYVFYNTFPHG---IDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSG 117 (792)
Q Consensus 44 ~~~~~~---~~~La~~alGVVyGDIGTSPLYv~~~~f~~~---~~~~~~vlGvlSLIfWtLtliv~iKYv~ivL~Adn~G 117 (792)
..+|+. ++.|||||+|||||||||||||||+++|+++ .+++|||+|+|||||||||||+++|||+|||||||||
T Consensus 15 ~~~w~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~~~~~~~~~~~ilGvLSLIfWtLtLiv~iKYV~ivlrAdn~G 94 (785)
T PLN00148 15 QLSWVNLSRNLLLAYQSFGVVYGDLSTSPLYVYKSTFSGKLQKHQNEETIFGAFSLIFWTFTLIPLLKYVTILLSADDNG 94 (785)
T ss_pred cchhhHHhHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHHHhHHHHHHHHHHHHHHHhheEEEEEecCCC
Confidence 345655 7999999999999999999999999999752 3899999999999999999999999999999999999
Q ss_pred CChHHHHHHHhhccccccccCCCCCCchhhhhccccccccchhhhHHHHHhhhhhhhHHHHHHHHhHhhhhhhcCccccc
Q 003831 118 QGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTP 197 (792)
Q Consensus 118 EGG~fALysLl~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~sm~~gDGviTP 197 (792)
||||||||||+|||+|++++||||++|+++++|++..+...+++.++|++||+|+++|.+++++|++|+||+||||+|||
T Consensus 95 EGG~fALysLl~r~~~~~~~pn~~~~d~~ls~~~~~~~~~~~~~~~~k~~lE~~~~~~~~ll~l~l~G~am~~gDgvlTP 174 (785)
T PLN00148 95 EGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSTQTVGSSPLKRFLEKHKRLRTALLLVVLFGACMVIGDGVLTP 174 (785)
T ss_pred CchHHHHHHHHHHhcccccCccchhhhhhhhhhccCccccchhhhHHHHHhhhchHHHHHHHHHHHHHHHHHHhccccch
Confidence 99999999999999999999999999999999988666655677889999999999999999999999999999999999
Q ss_pred hhhhhhhhccccccCCCCCCceEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHhhhhhccccCcceeeecC
Q 003831 198 AISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFS 277 (792)
Q Consensus 198 AISVLSAVeGl~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIm~vWfl~i~~~GiynI~~~~P~Vl~Aln 277 (792)
|||||||||||++..|++++++|+||||+||++||++||+||+|||++|||||++||++|+++|+|||++|||+||+|||
T Consensus 175 AISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~Aln 254 (785)
T PLN00148 175 AISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALS 254 (785)
T ss_pred hHHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcC
Confidence 99999999999999999988999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhcCcceeeeecceeeeeccccccccCCCCCCCcceehhhhHHHHHHHHhhhccchhhhcccCccccccccc
Q 003831 278 PVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYR 357 (792)
Q Consensus 278 P~ya~~f~~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~p~~~~npFy~ 357 (792)
|+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++++||||+
T Consensus 255 P~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~ 334 (785)
T PLN00148 255 PYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYD 334 (785)
T ss_pred HHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHHHhcCcccccCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcchHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEecCCcccCceeehhhHHHHHHHhhheeEeecC
Q 003831 358 SIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKN 437 (792)
Q Consensus 358 ~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~ 437 (792)
++|+|++||+|++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++|||
T Consensus 335 ~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~ 414 (785)
T PLN00148 335 SIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRD 414 (785)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHHhheeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhhhchhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHhhhh
Q 003831 438 QSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYV 517 (792)
Q Consensus 438 s~~l~~AYGiAV~~~M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~Kv~~GGW~pl~la~v~~~iM~~ 517 (792)
|++||||||+||++||++||||+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++
T Consensus 415 s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~ 494 (785)
T PLN00148 415 TTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYI 494 (785)
T ss_pred chhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhHHHHHHHHHhcCCChHHHHhcCCCCCCceecceEEEEecCCCCchhhHHHHhhhCCccceEEEEEEEEEeeccccC
Q 003831 518 WHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVP 597 (792)
Q Consensus 518 W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lh~~~Vfl~i~~~~vP~V~ 597 (792)
||||++++++++.+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||++||+|||++|+|+||
T Consensus 495 W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~ 574 (785)
T PLN00148 495 WHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVS 574 (785)
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccC
Confidence 99999999999999999999999888888889999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEecCCCCCEEEEEEEeecccCCCChHHHHHHHHHHHHHHHHhhhhccC------CCCCCCcccccccccc-c
Q 003831 598 EEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEG------CSDSDEYSLYGQQTLQ-S 670 (792)
Q Consensus 598 ~~eR~~v~~~~~~~~~~yr~~~ryGy~d~~~~~~~fe~~lv~~L~~FI~~e~~~~~------~~~~~~~~~~~~~~~~-~ 670 (792)
++||++++|+++++|++|||++||||||..+++++||++|+++|++|||+|+...+ .+++++++.+++.++. .
T Consensus 575 ~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (785)
T PLN00148 575 PEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEFIQMEAEEPQSSASESSSNDGRMAVISTRDVQSS 654 (785)
T ss_pred hhheEEEEEecCCCceEEEEEEEEccCcccccchHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999988999999999999999999884321 0112233333221110 0
Q ss_pred cccccCC-------CC-CCCCCCc---cccccccCC-CCCcCCCccccccccCcccCCCcchHHHHHHHHHhHhcCcEEE
Q 003831 671 TDGLLNN-------NG-NSTSSNQ---DLTMSSVDS-IVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHI 738 (792)
Q Consensus 671 ~~~~~~~-------~~-~~~~~~~---~~~~~~s~~-~~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYI 738 (792)
.....+. .. .+..+.. ..+..+.++ ....+++++|+... +.+. +++++||+++|++|+|+||+||
T Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~El~~L~~A~eaGVvYI 731 (785)
T PLN00148 655 SLLMVSEQELADIDDSIQSSKSLTLQSLQSAYEDENPGQSRRRRVRFQLPE-NPGM--DPSVREELMDLIEAKEAGVAYI 731 (785)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccceeecccc-cccc--cchHHHHHHHHHHHHHcCcEEE
Confidence 0000000 00 0000000 001111111 12345677876322 2222 6789999999999999999999
Q ss_pred eeecEEEecCCCchhHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 003831 739 LGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 792 (792)
Q Consensus 739 lG~~~vkak~~Ss~lKK~vIn~~Y~FLRkN~R~~~~~L~IPh~~LlEVGMvYeV 792 (792)
+||++||||++|||+||++||++|+|||||||+|.+.|+|||+|||||||+|||
T Consensus 732 lG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 732 MGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred eccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 999999999999999999999999999999999999999999999999999997
No 4
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=2.8e-252 Score=2141.00 Aligned_cols=749 Identities=50% Similarity=0.879 Sum_probs=678.0
Q ss_pred ccccccHHHHHHHHHhhcceeecccccchhhhhhcccCCC---CCCcCcEehhHHHHHHHHHHhhhheeeEEEEeecCCC
Q 003831 41 REKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHG---IDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSG 117 (792)
Q Consensus 41 ~~~~~~~~~~~~La~~alGVVyGDIGTSPLYv~~~~f~~~---~~~~~~vlGvlSLIfWtLtliv~iKYv~ivL~Adn~G 117 (792)
|.++.+|+.++.|||||+|||||||||||||||+++|+++ .+++|||+|+|||||||||||+++|||+|||||||||
T Consensus 11 ~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~~~ilGvLSLIfWtL~Liv~iKYv~ivlrAdn~G 90 (779)
T PLN00149 11 HVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIFGVLSFVFWTLTLIPLLKYVFIVLRADDNG 90 (779)
T ss_pred ccccccHHHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHhhhHHHHHHHHHHHHHhhhhEEEEEEecCCC
Confidence 4456789999999999999999999999999999999752 3899999999999999999999999999999999999
Q ss_pred CChHHHHHHHhhccccccccCCCCCCchhhhhccccccc----cchhhhHHHHHhhhhhhhHHHHHHHHhHhhhhhhcCc
Q 003831 118 QGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFH----EKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDG 193 (792)
Q Consensus 118 EGG~fALysLl~r~~~~~~~~~~~~~d~~~~~~~~~~~~----~~~~~~~~~~~le~~~~~~~~l~~l~l~G~sm~~gDG 193 (792)
||||||||||+|||+|++++||||++|+++++|+++.+. ..+++.++|++||+|+.+|++++++|++|+||+||||
T Consensus 91 EGGtfALysLl~r~~~~~l~pn~~~~d~~ls~~~~~~~~~~~~~~~~~~~~k~~le~~~~~~~~ll~l~l~G~~m~igDg 170 (779)
T PLN00149 91 EGGTFALYSLLCRHARVNSLPNCQLADEELSEYKKDSGSSSMPLSGFGSSLKSTLEKHRVLQRFLLVLALIGTCMVIGDG 170 (779)
T ss_pred CchHHHHHHHHHHhccccCCccccchhhhhhhhhccccccccccchhhhHHHHHHhhhhHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999887644 2334678999999999999999999999999999999
Q ss_pred cccchhhhhhhhccccccCCCCCCceE-ehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHhhhhhccccCcce
Q 003831 194 ILTPAISVLSASGGIKVDHPHMSNGVV-VLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSV 272 (792)
Q Consensus 194 viTPAISVLSAVeGl~v~~p~l~~~~V-v~is~~ILv~LF~iQ~~GT~kvg~~FgPIm~vWfl~i~~~GiynI~~~~P~V 272 (792)
|||||||||||||||++..|...++++ +||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+|
T Consensus 171 vlTPAISVLSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~~iGiyni~~~~p~V 250 (779)
T PLN00149 171 VLTPAISVFSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAIGVYNIFHWNPHV 250 (779)
T ss_pred ccchhHHHHHHhhcccccCCCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHhH
Confidence 999999999999999999976545455 9999999999999999999999999999999999999999999999999999
Q ss_pred eeecChHHHHHHHHhcCcceeeeecceeeeeccccccccCCCCCCCcceehhhhHHHHHHHHhhhccchhhhcccCc---
Q 003831 273 LKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQD--- 349 (792)
Q Consensus 273 l~AlnP~ya~~f~~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~p~--- 349 (792)
|+||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||+
T Consensus 251 l~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~GQaA~l~~~p~~~~ 330 (779)
T PLN00149 251 YQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSKHHVIES 330 (779)
T ss_pred hhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhhHHHHHhcCcchhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred cccccccccccCcchHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEecCCcccCceeehhhHHHHHHHhh
Q 003831 350 HVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCI 429 (792)
Q Consensus 350 ~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~l 429 (792)
+++||||+++|+|++||+|++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+
T Consensus 331 ~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i 410 (779)
T PLN00149 331 DYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWTLMLLCL 410 (779)
T ss_pred cccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHH
Confidence 56679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred heeEeecCchhhhhhhhchhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHH
Q 003831 430 AVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAA 509 (792)
Q Consensus 430 ~vv~~F~~s~~l~~AYGiAV~~~M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~Kv~~GGW~pl~la~ 509 (792)
++|++||||++||||||+||++||++||||+++||+.+|+||++++++|+++|+++|++|||||+.||+||||+||++|+
T Consensus 411 ~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~ 490 (779)
T PLN00149 411 AVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFLEGAWVPIALSF 490 (779)
T ss_pred hheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhHhHHHHHHHHHhcCCChHHHHhcCCCCCCceecceEEEEecCCCCchhhHHHHhhhCCccceEEEEEEEE
Q 003831 510 AFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVK 589 (792)
Q Consensus 510 v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lh~~~Vfl~i~ 589 (792)
+++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||++||+|||
T Consensus 491 v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~~~~lhe~~Vfv~ik 570 (779)
T PLN00149 491 IFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIK 570 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHhCCcccceEEEEEEE
Confidence 99999999999999999999999999999999988888899999999999999999999999999999999999999999
Q ss_pred EeeccccCCCceEEEEEecCCCCCEEEEEEEeecccCCCChHHHHHHHHHHHHHHHHhhhhccCC--C----CCCCcccc
Q 003831 590 YLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGC--S----DSDEYSLY 663 (792)
Q Consensus 590 ~~~vP~V~~~eR~~v~~~~~~~~~~yr~~~ryGy~d~~~~~~~fe~~lv~~L~~FI~~e~~~~~~--~----~~~~~~~~ 663 (792)
++|+|+||++||++++|++++++++|||++||||||..++++|||++|+++|++|||+|+..++. + ++++++..
T Consensus 571 ~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d~~dFE~~Lve~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~ 650 (779)
T PLN00149 571 SVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSEKPEPNGAPENEEGEDERMTVV 650 (779)
T ss_pred ECcccccChhheEEEEEecCCCceEEEEEEEEeeccccccchHHHHHHHHHHHHHHHhhhhccccccccccccccccccc
Confidence 99999999999999999999999999999999999999889999999999999999998742211 1 12233333
Q ss_pred ccccc-cccccccCCC--CCCCCCCccccccccCCCCCcCCCccccccccCcccCCCcchHHHHHHHHHhHhcCcEEEee
Q 003831 664 GQQTL-QSTDGLLNNN--GNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILG 740 (792)
Q Consensus 664 ~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG 740 (792)
++.+. .......++. ...+.+....+...+.+....++++||+... +.+. +++++||+++|++|||+||+||+|
T Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~v~eEl~~L~~A~eaGVvYIlG 727 (779)
T PLN00149 651 GTCSTHLEGIQLREDDSDKQEPAGTSELREIRSPPVSRPKKRVRFVVPE-SPKI--DRGAREELQELMEAREAGMAYILG 727 (779)
T ss_pred ccccccccccccccccccccccccccccccccCccccCcccceeecccc-cccc--chhHHHHHHHHHHHHHcCcEEEec
Confidence 22111 0000000000 0000000000000111111223567776332 2222 578999999999999999999999
Q ss_pred ecEEEecCCCchhHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 003831 741 NTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 792 (792)
Q Consensus 741 ~~~vkak~~Ss~lKK~vIn~~Y~FLRkN~R~~~~~L~IPh~~LlEVGMvYeV 792 (792)
|++||||++|||+||++|||+|+|||||||+|.+.|+|||+||+||||+|||
T Consensus 728 ~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 728 HSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred CceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999999999999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=3.5e-230 Score=1947.27 Aligned_cols=687 Identities=43% Similarity=0.773 Sum_probs=654.3
Q ss_pred HHHhhcceeecccccchhhhhhcccCCCCCCcCcEehhHHHHHHHHHHhhhheeeEEEEeecCCCCChHHHHHHHhhccc
Q 003831 53 FAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHA 132 (792)
Q Consensus 53 La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~vlGvlSLIfWtLtliv~iKYv~ivL~Adn~GEGG~fALysLl~r~~ 132 (792)
|++||+|||||||||||||||+++|.++.+++|||+|+||||||||||++++|||++||||||||||||||||||+||++
T Consensus 1 La~~alGvVyGDIGTSPLY~~~~~f~~~~~~~~~ilGvlSLIfWtL~livtiKYv~ivlrAdn~GEGGi~AL~sL~~r~~ 80 (688)
T TIGR00794 1 LAFQSLGVIYGDIGTSPLYVLSSTFSGGFPTERDIFGVLSLIFWLLTFIVSFKYIFIVLRADNNGEGGTFALYSLIGRYA 80 (688)
T ss_pred CcceeeeeEeCcCcCCHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhc
Confidence 57999999999999999999999997656899999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCchhhhhccccccccchhhhHHHHHhhhhhhhHHHHHHHHhHhhhhhhcCccccchhhhhhhhccccccC
Q 003831 133 KVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDH 212 (792)
Q Consensus 133 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~sm~~gDGviTPAISVLSAVeGl~v~~ 212 (792)
|.+.+|+|++.|+++++|+...+++.+++.++|+++|++++.|++++++|++|+||+||||+||||||||||||||+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~~~l~G~al~~gDgviTPAiSVLSAVeGl~v~~ 160 (688)
T TIGR00794 81 KISARPVHQELDRAESSYSTKSPNLLNKTTSLKTKLELSKFISKFLVIFGLLGGSMVMGDGVLTPAISVLSAVSGLEIVA 160 (688)
T ss_pred cccCCCcccchhhhhhhcccccccccchhhHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccC
Confidence 99899999999999999998887777788899999999999899999999999999999999999999999999999999
Q ss_pred CCCCCceEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhcCcce
Q 003831 213 PHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDG 292 (792)
Q Consensus 213 p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIm~vWfl~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~~~~~~g 292 (792)
|++++++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+||+.|
T Consensus 161 p~~~~~~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~~~~~ 240 (688)
T TIGR00794 161 PSLSDTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIVKFNPEVLKALSPYYAVQFFIEYGTVG 240 (688)
T ss_pred CCCCCCeehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHHHHHHHHCCCce
Confidence 99988899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecceeeeeccccccccCCCCCCCcceehhhhHHHHHHHHhhhccchhhhcccCccccccccccccCcchHHHHHHHH
Q 003831 293 WTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVAT 372 (792)
Q Consensus 293 ~~~LG~V~L~iTGaEALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~p~~~~npFy~~~P~~~~~P~~vlAt 372 (792)
|.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||
T Consensus 241 ~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~~vlAt 320 (688)
T TIGR00794 241 WVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKHPEAIKNPFFLSIPDWALWPLFIIAT 320 (688)
T ss_pred eeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcCcchhcCcHHHhCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEecCCcccCceeehhhHHHHHHHhhheeEeecCchhhhhhhhchhhHH
Q 003831 373 AAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIV 452 (792)
Q Consensus 373 lAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiAV~~~ 452 (792)
+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||+|||+||++|
T Consensus 321 lAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S~~la~AYGiaVt~t 400 (688)
T TIGR00794 321 LAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDTNNLGAAYGIAVTGT 400 (688)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHheeEEecChHHHHHHhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHHHHhc
Q 003831 453 MLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHS 532 (792)
Q Consensus 453 M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~Kv~~GGW~pl~la~v~~~iM~~W~~G~~~~~~~~~~~ 532 (792)
|+|||+|+++||+.+||||++++++|+++|+.+|++|||||+.|++||||+||++|++++++|++|+|||+++++++.+|
T Consensus 401 M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~ 480 (688)
T TIGR00794 401 FLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTWRYGRFRKLRRDHEH 480 (688)
T ss_pred hHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHhcCCC-CCCceecceEEEEecCCCCchhhHHHHhhhCCccceEEEEEEEEEeeccccCCCceEEEEEecCCC
Q 003831 533 KVSMAWILGLGPS-LGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKN 611 (792)
Q Consensus 533 ~~~~~~~~~~~~~-~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lh~~~Vfl~i~~~~vP~V~~~eR~~v~~~~~~~ 611 (792)
++|+++|++.+.+ .+.+|+||+|+|||++++++|++|.||++|||++||++||+||+++|+|+||++||++++++++++
T Consensus 481 ~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp~~eR~~v~~l~~~~ 560 (688)
T TIGR00794 481 RVSISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVHNEERVQISQVGPTE 560 (688)
T ss_pred CCCHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccceEEEEEEEEECCCCcCCcceEEEEEEEcCCC
Confidence 9999999885544 444899999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCEEEEEEEeecccCCCChHHHHHHHHHHHHHHHHhhhhccCCCCCCCccccccccccccccccCCCCCCCCCCcccccc
Q 003831 612 FHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMS 691 (792)
Q Consensus 612 ~~~yr~~~ryGy~d~~~~~~~fe~~lv~~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (792)
|+|||++||||||+||+|++|+++++++|++||+++..... . + + +.. .
T Consensus 561 -g~~rv~~~yGf~e~~~~~~~l~~~ii~~L~~fi~~~~~~~~-~---------~----~--------------~~~---~ 608 (688)
T TIGR00794 561 -GMYRCVIRYGFMDTPNEPKELAAHIVNSIVEFVEHECGFNL-N---------N----L--------------EEL---S 608 (688)
T ss_pred -CEEEEEEEecCCcCCCcHHHHHHHHHHHHHHHHHHHhhhcc-c---------c----c--------------ccc---c
Confidence 89999999999999999999999999999999998652100 0 0 0 000 0
Q ss_pred ccCCCCCcCCCccccccccCcccCCCcchHHHHHHHHHhHhcCcEEEeeecEEEecCCCchhHHHHHHHHHHHHHhhccC
Q 003831 692 SVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRE 771 (792)
Q Consensus 692 ~s~~~~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~vkak~~Ss~lKK~vIn~~Y~FLRkN~R~ 771 (792)
++ +. +.+.+||++++++++|+|++|++||++++++++|+++||+.||++|.|||||||+
T Consensus 609 -~~----------------~~----~~~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~~~~~~~~I~~lf~~l~rn~~~ 667 (688)
T TIGR00794 609 -DK----------------RC----RMPIEEIFENAMETKEHGYSYFMGEESLILKKRSPILRKIRVNHVFLFIRRNARR 667 (688)
T ss_pred -cc----------------cc----ccchHHHHHHHHHHhhcCCEEEeeceEEEECCCccHHHHHHHHHHHHHHHHhccC
Confidence 00 00 1235789999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCCCeEeeeeEEEC
Q 003831 772 NSVIFNVPHESLLNVGQIFYV 792 (792)
Q Consensus 772 ~~~~L~IPh~~LlEVGMvYeV 792 (792)
+...++|||+|++||||.||+
T Consensus 668 ~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 668 APKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred hhhheeCChhhEEEEeeEEEC
Confidence 999999999999999999996
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=4.2e-207 Score=1734.68 Aligned_cols=606 Identities=30% Similarity=0.554 Sum_probs=575.0
Q ss_pred HHHHhhcceeecccccchhhhhhcccCCC--C-CCcCcEehhHHHHHHHHHHhhhheeeEEEEeecCCCCChHHHHHHHh
Q 003831 52 RFAFQSLGVVYGDLGTSPLYVFYNTFPHG--I-DDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLL 128 (792)
Q Consensus 52 ~La~~alGVVyGDIGTSPLYv~~~~f~~~--~-~~~~~vlGvlSLIfWtLtliv~iKYv~ivL~Adn~GEGG~fALysLl 128 (792)
.++++|+|||||||||||||+|+++|.++ . +++|||+|++||||||||+++++|||+++|||||||||||||||||+
T Consensus 11 ~l~l~aLGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~livtiKYv~ivlrADn~GEGGi~AL~aL~ 90 (622)
T PRK10745 11 AITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLILVVSIKYLTFVMRADNAGEGGILTLMSLA 90 (622)
T ss_pred HHHHhhcceEecCCCCChHHHHHHHhccCCCCCCChhHeehhhHHHHHHHHHHHHHHhheEEEecCCCCCchHHHHHHHH
Confidence 48899999999999999999999999762 2 89999999999999999999999999999999999999999999999
Q ss_pred hccccccccCCCCCCchhhhhccccccccchhhhHHHHHhhhhhhhHHHHHHHHhHhhhhhhcCccccchhhhhhhhccc
Q 003831 129 CRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGI 208 (792)
Q Consensus 129 ~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~sm~~gDGviTPAISVLSAVeGl 208 (792)
+|+.+ ++.|.+++++|++|+||+||||+||||||||||||||
T Consensus 91 ~~~~~--------------------------------------~~~~~~l~~lgl~Gaal~~gDgvITPAISVLSAVEGL 132 (622)
T PRK10745 91 GRNTS--------------------------------------ARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEGL 132 (622)
T ss_pred hhhcc--------------------------------------cchhHHHHHHHHHHHHHHhhccccchhHHHHHHhhcc
Confidence 77543 1245578999999999999999999999999999999
Q ss_pred cccCCCCCCceEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhc
Q 003831 209 KVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRG 288 (792)
Q Consensus 209 ~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIm~vWfl~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~~~ 288 (792)
|+..|+++ ++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++ ||+||+|+||+|+++||.+|
T Consensus 133 ~v~~p~l~-~~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~vWF~~i~~~Gi~~I~~-~P~Vl~AlnP~ya~~f~~~~ 210 (622)
T PRK10745 133 EIVAPQLD-TYIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLTLAVLGLRSIIA-NPEVLHALNPMWAVHFFLEY 210 (622)
T ss_pred cccCCCCC-CccHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHhc-CHHHHhHhCHHHHHHHHHhC
Confidence 99999995 59999999999999999999999999999999999999999999999998 89999999999999999999
Q ss_pred CcceeeeecceeeeeccccccccCCCCCCCcceehhhhHHHHHHHHhhhccchhhhcccCccccccccccccCcchHHHH
Q 003831 289 GRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVF 368 (792)
Q Consensus 289 ~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~p~~~~npFy~~~P~~~~~P~~ 368 (792)
|..||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||+|++||++.+||||.++|+|++||++
T Consensus 211 ~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~v 290 (622)
T PRK10745 211 KTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLL 290 (622)
T ss_pred CCceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchHHHHhcCchhhcCcHHHhCChhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEecCCcccCceeehhhHHHHHHHhhheeEeecCchhhhhhhhch
Q 003831 369 IVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTA 448 (792)
Q Consensus 369 vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiA 448 (792)
++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++++++||||++||+|||+|
T Consensus 291 iLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vNw~Lmv~~i~~vl~F~sS~~La~AYGiA 370 (622)
T PRK10745 291 ILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVNWLLYVAVVIVIVSFEHSSNLAAAYGIA 370 (622)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHeeEEEecCchHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHH
Q 003831 449 VVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEF 528 (792)
Q Consensus 449 V~~~M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~Kv~~GGW~pl~la~v~~~iM~~W~~G~~~~~~~ 528 (792)
|++||++||+|++++++.+|+|+++++++++++|+++|+.||+||+.|++||||+|+++|++++++|++|++||++++++
T Consensus 371 Vt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~v~~~iM~tW~~G~~~~~~~ 450 (622)
T PRK10745 371 VTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSLGLVMFIVMTTWKSERFRLLRR 450 (622)
T ss_pred heeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCChHHHHhcCCCCCCceecceEEEEecCCCCchhhHHHHhhhCCccceEEEEEEEEEeeccccCCCceEEEEEec
Q 003831 529 EMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIG 608 (792)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lh~~~Vfl~i~~~~vP~V~~~eR~~v~~~~ 608 (792)
+.++++|+++|++.+++.++.|+||+|+|||+..+++|+++.||+||||++||++||+||+++|+|+||++||+++++++
T Consensus 451 ~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lhe~~v~l~v~~~~~P~V~~~eR~~v~~l~ 530 (622)
T PRK10745 451 MHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLS 530 (622)
T ss_pred HHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccceEEEEEEEEECCCcccCcccEEEEEEEC
Confidence 99999999999999988887899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeecccCCCChHHHHHHHHHHHHHHHHhhhhccCCCCCCCccccccccccccccccCCCCCCCCCCccc
Q 003831 609 PKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDL 688 (792)
Q Consensus 609 ~~~~~~yr~~~ryGy~d~~~~~~~fe~~lv~~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (792)
+ |+|||++||||||+||+|+.+++. +.+.
T Consensus 531 ~---g~~rv~~~yGf~e~~~i~~~L~~~---------~~~g--------------------------------------- 559 (622)
T PRK10745 531 P---TFWRVVASYGWRETPNVEEVFHRC---------GLEG--------------------------------------- 559 (622)
T ss_pred C---CEEEEEEEecCCCCCCHHHHHHHH---------HhCC---------------------------------------
Confidence 6 799999999999999998776531 0000
Q ss_pred cccccCCCCCcCCCccccccccCcccCCCcchHHHHHHHHHhHhcCcEEEeeecEEEecCCCc---hhHHHHHHHHHHHH
Q 003831 689 TMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSK---FYKKIAIDYIYAFL 765 (792)
Q Consensus 689 ~~~~s~~~~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~vkak~~Ss---~lKK~vIn~~Y~FL 765 (792)
.+++ . ..++|.+||+.++..++++ |-|| +|.||
T Consensus 560 --------------~~~~--~-----------------------~~~s~fl~r~~l~~~~~~~m~~wr~~-----lF~~m 595 (622)
T PRK10745 560 --------------LSCR--M-----------------------METSFFMSHESLILGKRPWYLRLRGK-----LFLLL 595 (622)
T ss_pred --------------CCCC--c-----------------------cceEEEEeeEEEEeCCCCCcHHHHHH-----HHHHH
Confidence 0000 0 1579999999999888877 6665 68999
Q ss_pred HhhccCCCcccccCCCCeEeeeeEEEC
Q 003831 766 RKICRENSVIFNVPHESLLNVGQIFYV 792 (792)
Q Consensus 766 RkN~R~~~~~L~IPh~~LlEVGMvYeV 792 (792)
.||++++...+++|++|++|+|+.+|+
T Consensus 596 ~rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 596 QRNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred HHcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 999999999999999999999999985
No 7
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=6.6e-198 Score=1648.27 Aligned_cols=532 Identities=47% Similarity=0.820 Sum_probs=519.3
Q ss_pred HHhhcceeecccccchhhhhhcccC--CCCCCcCcEehhHHHHHHHHHHhhhheeeEEEEeecCCCCChHHHHHHHhhcc
Q 003831 54 AFQSLGVVYGDLGTSPLYVFYNTFP--HGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRH 131 (792)
Q Consensus 54 a~~alGVVyGDIGTSPLYv~~~~f~--~~~~~~~~vlGvlSLIfWtLtliv~iKYv~ivL~Adn~GEGG~fALysLl~r~ 131 (792)
|++|+|||||||||||||+|+++|. +..+++|||+|+||||||||||++++|||+++|||||||||||||||||+||.
T Consensus 1 a~~alGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~vlG~lSlIfWtL~liv~iKYv~ivlradn~GEGGi~aL~sL~~~~ 80 (534)
T PF02705_consen 1 ALGALGVVYGDIGTSPLYVFKEIFGSHGLPPTEENVLGVLSLIFWTLTLIVTIKYVLIVLRADNNGEGGIFALYSLIRRF 80 (534)
T ss_pred CceeEEEEeCCCCCCHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHHHHHheEEEEEEeCCCCChhHHHHHHHHHHh
Confidence 6899999999999999999999993 24599999999999999999999999999999999999999999999999854
Q ss_pred ccccccCCCCCCchhhhhccccccccchhhhHHHHHhhhhhhhHHHHHHHHhHhhhhhhcCccccchhhhhhhhcccccc
Q 003831 132 AKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVD 211 (792)
Q Consensus 132 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~sm~~gDGviTPAISVLSAVeGl~v~ 211 (792)
.+ ++++.|..++++|++|+||+||||+||||||||||||||++.
T Consensus 81 ~~------------------------------------~~~~~~~~l~~l~l~G~al~~gDgviTPAISVlSAvEGl~v~ 124 (534)
T PF02705_consen 81 LK------------------------------------SSKRRRWLLLILGLLGAALFYGDGVITPAISVLSAVEGLEVA 124 (534)
T ss_pred hc------------------------------------cchhHHHHHHHHHHHHhhhhhcceeecchHHHHHHhhhhhcc
Confidence 33 345677778999999999999999999999999999999999
Q ss_pred CCCCCCceEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhcCcc
Q 003831 212 HPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRD 291 (792)
Q Consensus 212 ~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIm~vWfl~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~~~~~~ 291 (792)
+|+++ ++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++| |+||+|+||+|+++||.+||+.
T Consensus 125 ~p~~~-~~Vv~it~~ILv~LF~iQ~~GT~~ig~~FgPim~~WF~~l~~~G~~~I~~~-p~Vl~A~nP~yai~f~~~~~~~ 202 (534)
T PF02705_consen 125 TPSLE-PYVVPITIAILVGLFAIQRFGTAKIGKLFGPIMLLWFLTLGVLGLYNIIQH-PEVLKALNPYYAIRFFIRNGWI 202 (534)
T ss_pred CCCCc-ceehhHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhC-HHHHHHhCHHHHHHHHHHcCCc
Confidence 99997 699999999999999999999999999999999999999999999999994 9999999999999999999999
Q ss_pred eeeeecceeeeeccccccccCCCCCCCcceehhhhHHHHHHHHhhhccchhhhcccCccccccccccccCcchHHHHHHH
Q 003831 292 GWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVA 371 (792)
Q Consensus 292 g~~~LG~V~L~iTGaEALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~p~~~~npFy~~~P~~~~~P~~vlA 371 (792)
||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++|
T Consensus 203 ~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilA 282 (534)
T PF02705_consen 203 GFFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQGALLLSHPEAVSNPFFLLIPEWLLWPMVILA 282 (534)
T ss_pred hhhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHHHHHHcCcchhhhHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEecCCcccCceeehhhHHHHHHHhhheeEeecCchhhhhhhhchhhH
Q 003831 372 TAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVI 451 (792)
Q Consensus 372 tlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiAV~~ 451 (792)
|+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++++++||||++||+|||+||++
T Consensus 283 tlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S~~la~AYGiAVt~ 362 (534)
T PF02705_consen 283 TLATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSSSNLAAAYGIAVTG 362 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHHHHHHHHHHhhheEECChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHHHHh
Q 003831 452 VMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMH 531 (792)
Q Consensus 452 ~M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~Kv~~GGW~pl~la~v~~~iM~~W~~G~~~~~~~~~~ 531 (792)
||++||+|++++++.+||||.+++++|+++|+.+|+.||+||+.|++||||+|+++|++++++|++|+|||+++++++++
T Consensus 363 tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~ 442 (534)
T PF02705_consen 363 TMLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTWRRGRKLLYEFERE 442 (534)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChHHHHhcCCCCCCceecceEEEEecCCCCchhhHHHHhhhCCccceEEEEEEEEEeeccccCCCceEEEEEecCCC
Q 003831 532 SKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKN 611 (792)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lh~~~Vfl~i~~~~vP~V~~~eR~~v~~~~~~~ 611 (792)
+++++++++++.++.++.|+||+|+|+|+..+++|+++.||++||+++||+++|+|++++|+|+||++||++++++++
T Consensus 443 ~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~~~R~~v~~l~~-- 520 (534)
T PF02705_consen 443 NKLPLDDFLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPPEERYEVERLGP-- 520 (534)
T ss_pred cCCCHHHHHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCcccceEEEEEEEEeccCCCCCceEEEEEEecC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred CCEEEEEEEeeccc
Q 003831 612 FHMFRCVARYGYKD 625 (792)
Q Consensus 612 ~~~yr~~~ryGy~d 625 (792)
+|+|||++||||||
T Consensus 521 ~g~~rv~~ryGf~e 534 (534)
T PF02705_consen 521 DGFYRVTLRYGFME 534 (534)
T ss_pred CCEEEEEEEecCCC
Confidence 38999999999998
No 8
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-192 Score=1575.25 Aligned_cols=610 Identities=35% Similarity=0.629 Sum_probs=579.3
Q ss_pred HHHHHHhhcceeecccccchhhhhhcccCC--CC-CCcCcEehhHHHHHHHHHHhhhheeeEEEEeecCCCCChHHHHHH
Q 003831 50 LLRFAFQSLGVVYGDLGTSPLYVFYNTFPH--GI-DDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYS 126 (792)
Q Consensus 50 ~~~La~~alGVVyGDIGTSPLYv~~~~f~~--~~-~~~~~vlGvlSLIfWtLtliv~iKYv~ivL~Adn~GEGG~fALys 126 (792)
+.+++++|+|||||||||||||+++++|.. +. .++++|+|++||||||||+|||+|||+++|||||||||||++|++
T Consensus 15 ~~~l~lgAiGVVyGDIGTSPLYa~~e~~~~~~~~~v~~~~VlGvlSLi~WtLtlIVTiKYv~~vlRADN~GEGGilsL~a 94 (627)
T COG3158 15 TKALTLGAIGVVYGDIGTSPLYALREALSGQGGLGVSRDEVLGVLSLIIWTLTLIVTIKYVLFVLRADNNGEGGILSLMA 94 (627)
T ss_pred chhHhhheeeeEeccCCCChHHHHHHHhccCCCCCCCcceeeeHHHHHHHHHHHHHHHhhheeEEecCCCCCchhhhHHH
Confidence 457899999999999999999999999986 33 789999999999999999999999999999999999999999999
Q ss_pred HhhccccccccCCCCCCchhhhhccccccccchhhhHHHHHhhhhhhhHHHHHHHHhHhhhhhhcCccccchhhhhhhhc
Q 003831 127 LLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASG 206 (792)
Q Consensus 127 Ll~r~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~sm~~gDGviTPAISVLSAVe 206 (792)
|++|.++ +...++.++|++|+|+|+|||+||||||||||||
T Consensus 95 L~~~~~~---------------------------------------~~~~~l~~~g~iGaalf~GD~vITPAiSVlSAvE 135 (627)
T COG3158 95 LARRAAP---------------------------------------RRTALLIILGLIGAALFYGDAVITPAISVLSAVE 135 (627)
T ss_pred HHHhhcC---------------------------------------CCchhhhhHHHHhHHHHhcccccchhHHHHHHhc
Confidence 9988765 1455899999999999999999999999999999
Q ss_pred cccccCCCCCCceEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHH
Q 003831 207 GIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFR 286 (792)
Q Consensus 207 Gl~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIm~vWfl~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~ 286 (792)
||++++|.++ ++|+|||++||++||++||+||++||++|||||++||+++|.+|++||.+ ||+||+|+|||||++|+.
T Consensus 136 GL~iv~p~~~-~~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~lWF~~l~~~Gl~~i~~-~p~IL~AiNP~yAi~fl~ 213 (627)
T COG3158 136 GLEIVTPALD-PYVVPITLIILVLLFLIQRFGTGRVGKLFGPVMLLWFLALAVLGLINIID-DPEILRAINPYYAVHFLL 213 (627)
T ss_pred cccccCcccc-CccHHHHHHHHHHHHHHhcccchhhhhhhccHHHHHHHHHHHHHHHHHhc-CHHHHHHhChHHHHHHHH
Confidence 9999999996 69999999999999999999999999999999999999999999999998 999999999999999999
Q ss_pred hcCcceeeeecceeeeeccccccccCCCCCCCcceehhhhHHHHHHHHhhhccchhhhcccCccccccccccccCcchHH
Q 003831 287 RGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWP 366 (792)
Q Consensus 287 ~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~p~~~~npFy~~~P~~~~~P 366 (792)
++|..||+.||+||||+||+||||||||||||+|||.||+++|+|||+|||+||||++++||++..||||.++|+|++||
T Consensus 214 ~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQGA~vL~~p~a~~npFF~~~P~~aliP 293 (627)
T COG3158 214 EEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQGALLLSNPEAIGNPFFLLAPDWALIP 293 (627)
T ss_pred hCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHccccceeccCcccccCcHHHhChhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEecCCcccCceeehhhHHHHHHHhhheeEeecCchhhhhhhh
Q 003831 367 VFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYG 446 (792)
Q Consensus 367 ~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYG 446 (792)
++++||+||||||||+|||+||++|||++||++|||||.|||+++.||||||.|||+|++++++++++||+|++||+|||
T Consensus 294 ~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN~~L~~~V~~~vl~F~~S~~LAaAYG 373 (627)
T COG3158 294 LVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVNWLLLVAVVFVVLGFGSSSNLAAAYG 373 (627)
T ss_pred HHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHHHHHHHHHhheeeEecChHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHH
Q 003831 447 TAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRY 526 (792)
Q Consensus 447 iAV~~~M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~Kv~~GGW~pl~la~v~~~iM~~W~~G~~~~~ 526 (792)
+|||++|+|||+|++.+++..|||+.+.+.++.++|+++|..||+||+.|++||||+|+++|++++++|+||++|+++.+
T Consensus 374 iAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GGw~pllia~~i~~vM~tW~~g~~~l~ 453 (627)
T COG3158 374 IAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGGWLPLLLAAVIFFVMWTWKRGRQILF 453 (627)
T ss_pred hheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCChHHHHhcCCCCCCceecceEEEEecCCCCchhhHHHHhhhCCccceEEEEEEEEEeeccccCCCceEEEEE
Q 003831 527 EFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKR 606 (792)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~l~~~~~lh~~~Vfl~i~~~~vP~V~~~eR~~v~~ 606 (792)
++..++++|++.+++.+++.++.|||||++|+|+..+.+|.+++|++|||+++||++||+++++.++|+|+++||+.+++
T Consensus 454 ~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvlhe~nv~ltv~t~~~P~v~~~~r~~ve~ 533 (627)
T COG3158 454 EKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVLHERNVFLTVRTEDVPYVHPTDRVKVEQ 533 (627)
T ss_pred HHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhheeeeeEEEEEEEecCCCCCCccceeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCEEEEEEEeecccCCCChHHHHHHHHHHHHHHHHhhhhccCCCCCCCccccccccccccccccCCCCCCCCCCc
Q 003831 607 IGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQ 686 (792)
Q Consensus 607 ~~~~~~~~yr~~~ryGy~d~~~~~~~fe~~lv~~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (792)
+++ +++||.++|||||+||+|+.+..- +.+
T Consensus 534 l~~---~f~rV~l~~Gfme~pnvp~~l~~~---------~~~-------------------------------------- 563 (627)
T COG3158 534 LSD---DFVRVVLHFGFMETPNVPRALRLC---------RKK-------------------------------------- 563 (627)
T ss_pred ccC---ceEEEEEEeeccCCCCHHHHHHHH---------hhc--------------------------------------
Confidence 998 699999999999999998766431 100
Q ss_pred cccccccCCCCCcCCCccccccccCcccCCCcchHHHHHHHHHhHhcCcEEEeeecEEEecCCCchhHHHHHHHHHHHHH
Q 003831 687 DLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLR 766 (792)
Q Consensus 687 ~~~~~~s~~~~~~~~~~~f~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~vkak~~Ss~lKK~vIn~~Y~FLR 766 (792)
+.+|+ .+ ...|.+|++.+++++.|++.+ +-- -.|.+|.
T Consensus 564 ---------------G~~f~--im-----------------------~tsFfl~re~l~~~~~~g~~~-w~~-~lfi~l~ 601 (627)
T COG3158 564 ---------------GLKFD--IM-----------------------ETSFFLSRESLIASKNSGMPR-WRD-RLFIALA 601 (627)
T ss_pred ---------------Cceec--cc-----------------------ceEEEEEeeeeecCCCCCchH-HHH-HHHHHHH
Confidence 11121 11 357999999999999999876 333 4789999
Q ss_pred hhccCCCcccccCCCCeEeeeeEEEC
Q 003831 767 KICRENSVIFNVPHESLLNVGQIFYV 792 (792)
Q Consensus 767 kN~R~~~~~L~IPh~~LlEVGMvYeV 792 (792)
||.-++...++||.+|++|+|-.-|+
T Consensus 602 r~aa~~~~~F~lp~~rvvElGtqveI 627 (627)
T COG3158 602 RNAASPTDYFKLPPNRVVELGTQVEI 627 (627)
T ss_pred HhcCCHHHhhCCCCCcEEEeeeeeeC
Confidence 99999999999999999999965443
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=91.08 E-value=0.53 Score=54.28 Aligned_cols=87 Identities=20% Similarity=0.169 Sum_probs=43.2
Q ss_pred EehhHHHHHHHHHhhhccccccccc---chhhHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhcCcceee-e
Q 003831 220 VVLVAVVILVGLFSLQHYGTDRVGW---LFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWT-S 295 (792)
Q Consensus 220 Vv~is~~ILv~LF~iQ~~GT~kvg~---~FgPIm~vWfl~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~~~~~~g~~-~ 295 (792)
...+++++++++..+.-+|....++ .+.-+.++=++.+.+.|++.+.+.+++ ..+|...+.-.. ++..+|. .
T Consensus 165 ~~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~~~~~~---~~~~~~~f~~~~-~~~~~~~~a 240 (501)
T TIGR00911 165 IRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVE---SLNPKNAFEGTE-TSAGGIVLA 240 (501)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCcccccCCCC-CcHHHHHHH
Confidence 3467788888889999999765554 333333322233344555544321111 112221110000 1222333 4
Q ss_pred ecceeeeeccccccc
Q 003831 296 LGGIMLSITGTEALF 310 (792)
Q Consensus 296 LG~V~L~iTGaEALy 310 (792)
+..++.+.+|-|+.=
T Consensus 241 ~~~~~~af~G~e~~~ 255 (501)
T TIGR00911 241 FYSGIWAYGGWNYLN 255 (501)
T ss_pred HHHHHHHHHhHHHHh
Confidence 556677888887643
No 10
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=81.61 E-value=10 Score=42.56 Aligned_cols=177 Identities=18% Similarity=0.175 Sum_probs=100.7
Q ss_pred eEehhHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhcC--cceeeee
Q 003831 219 VVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGG--RDGWTSL 296 (792)
Q Consensus 219 ~Vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIm~vWfl~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~~~~--~~g~~~L 296 (792)
....++.++++.++.++-+|....++...-..++=++.+.++.+..+...+......+++... ..+ ..-...+
T Consensus 133 ~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 207 (466)
T COG0531 133 LIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP-----GGGSFGGILAAI 207 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc-----ccchHHHHHHHH
Confidence 467789999999999999999888876655555545555555555444432222222221110 000 0123345
Q ss_pred cceeeeecccccc--ccC-CCCCCCcceehhhhHHHHHHHHhhhccchhhhcccCc-ccc-----ccccc---ccc-Ccc
Q 003831 297 GGIMLSITGTEAL--FAD-LAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQD-HVV-----DAFYR---SIP-DSI 363 (792)
Q Consensus 297 G~V~L~iTGaEAL--yAD-lGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~p~-~~~-----npFy~---~~P-~~~ 363 (792)
+.++.+.+|-|+. +|+ +=+ .+|.|-.|-..-..-+.++-.+++-+....-|. +.. +|+.. ... .+.
T Consensus 208 ~~~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~ 286 (466)
T COG0531 208 LLAFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNWG 286 (466)
T ss_pred HHHHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccHH
Confidence 5667888898864 332 333 455566665544333444333344333333332 111 44432 223 356
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCc
Q 003831 364 YWPVFIVATAAAIVASQATISATFSIIKQALALGCFPR 401 (792)
Q Consensus 364 ~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr 401 (792)
.+-+.+++.+++.-+..+.+.+.--+..+.-+-|++|+
T Consensus 287 ~~~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 287 AIIIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 66666666666666667777777777788888999998
No 11
>TIGR00909 2A0306 amino acid transporter.
Probab=78.37 E-value=22 Score=39.95 Aligned_cols=169 Identities=18% Similarity=0.164 Sum_probs=80.6
Q ss_pred EehhHHHHHHHHHhhhcccccccc---cchhhHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhcCccee-ee
Q 003831 220 VVLVAVVILVGLFSLQHYGTDRVG---WLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGW-TS 295 (792)
Q Consensus 220 Vv~is~~ILv~LF~iQ~~GT~kvg---~~FgPIm~vWfl~i~~~GiynI~~~~P~Vl~AlnP~ya~~f~~~~~~~g~-~~ 295 (792)
+..++++++++...+..+|....+ ..+..+.++=++.+.+.|+.+. ++.-+..+.|. +..+| ..
T Consensus 133 ~~~~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~ 200 (429)
T TIGR00909 133 FNLPALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHF---ASNNYTPFMPM---------GFGGVGAA 200 (429)
T ss_pred ccHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhC---cHHhcCCCCCC---------cHHHHHHH
Confidence 334567777888888888865554 4666666554444445555433 22222222221 11121 11
Q ss_pred ecceeeeecccccccc--CCCCCCCcceehhhhHHHHHHHHhhhccchhhhccc-C-c---ccccccc----ccccCcch
Q 003831 296 LGGIMLSITGTEALFA--DLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNH-Q-D---HVVDAFY----RSIPDSIY 364 (792)
Q Consensus 296 LG~V~L~iTGaEALyA--DlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~-p-~---~~~npFy----~~~P~~~~ 364 (792)
+...+.+.+|=|+.-. +-=+-.+|.+..|-..-+.-+. +.|+.-....... | + ..++|+. +...++.-
T Consensus 201 ~~~~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~~~~-v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (429)
T TIGR00909 201 TALVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLIVVT-LLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGG 279 (429)
T ss_pred HHHHHHHHhhHHHHHhhHHhccCccccccHHHHHHHHHHH-HHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHH
Confidence 2334566677776543 3233445667666543222222 2244333222211 1 1 1123432 22233444
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCc
Q 003831 365 WPVFIVATAAAIVASQATISATFSIIKQALALGCFPR 401 (792)
Q Consensus 365 ~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr 401 (792)
+-+.+.+.++..-+..+.+.+.=-++...-+.|.+|+
T Consensus 280 ~~~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~ 316 (429)
T TIGR00909 280 LILTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPG 316 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcH
Confidence 4444444444444444544444445555567899997
No 12
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=76.11 E-value=6.7 Score=43.75 Aligned_cols=247 Identities=15% Similarity=0.122 Sum_probs=130.1
Q ss_pred cchhhhhhhhcccccc-CCCCCCc--eEehhHHHHHHHHHhhhcccccccccc---hhhHHH-HHHHHHHHhhhhhcccc
Q 003831 196 TPAISVLSASGGIKVD-HPHMSNG--VVVLVAVVILVGLFSLQHYGTDRVGWL---FAPIVL-LWFLLIGGIGMLNIWKY 268 (792)
Q Consensus 196 TPAISVLSAVeGl~v~-~p~l~~~--~Vv~is~~ILv~LF~iQ~~GT~kvg~~---FgPIm~-vWfl~i~~~GiynI~~~ 268 (792)
+.+....++.+-+... .|++.++ ....++.++++..+.+.-+|....+++ ++=+.+ .-++.+.+.|++...+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~~~~~ 170 (426)
T PF13520_consen 91 SLASVASSFASYLLSLFGPDLNPSPWPQFLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVSFSFS 170 (426)
T ss_dssp HHHHHHHHHHHHHTTTTTGGGTCSHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCC
T ss_pred cccccccchhhhhhhccccccccccchheeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEeeeccc
Confidence 3334444455544432 2343221 245678888888999999998766653 333333 35555666676655431
Q ss_pred Ccce-----eeecChHHHHHHHHhcCcc-eeeeecceeeeeccccccccCCCCCCCcceehhhhHHHHHHHHhhhccchh
Q 003831 269 DSSV-----LKAFSPVYIYRYFRRGGRD-GWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAA 342 (792)
Q Consensus 269 ~P~V-----l~AlnP~ya~~f~~~~~~~-g~~~LG~V~L~iTGaEALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA 342 (792)
..- ....+|. +.. -+..+...+.+.+|-|+.=.-.+-.-+|.+..+=..-+.-+.++.-+..-+
T Consensus 171 -~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~~ 240 (426)
T PF13520_consen 171 -GFNSLSFSLSTFFPS---------GWPGFLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSIA 240 (426)
T ss_dssp -HHH----SHSCSSCS---------SSSHHHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -ccccccccccccCCc---------cccchhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhhhe
Confidence 110 1111211 111 134456678888898875444444545666655443333333333333333
Q ss_pred hhcccCcc----ccc------ccccc-ccCcchHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCceeEEecCCcc
Q 003831 343 YLMNHQDH----VVD------AFYRS-IPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKF 411 (792)
Q Consensus 343 ~ll~~p~~----~~n------pFy~~-~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ki~hTS~~~ 411 (792)
+...-|.+ .+| .+++. -.++..+.+.+.+.++..-+-.+.+.+.--++.+.-+-|.+|+ +..|++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~~k-- 317 (426)
T PF13520_consen 241 LLGALPDDELANSSNSPSPFAVLASAVGGSWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPK-WFAKVNK-- 317 (426)
T ss_dssp HHTTSTHCHHHTTTCHHCHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTTSS--
T ss_pred eeecccchhhhcccccccccchhhccccccccccccccccccccccccchhhcchhhcccccccccchhh-hhhhccc--
Confidence 33332221 112 22332 2467888888888888888777777777777888888999994 2223331
Q ss_pred cCceeehhhHHHHHHHhh-hee--Eee---cCchhhhhhhhchhhHHHHHHHH
Q 003831 412 LGQIYIPDINWILMILCI-AVT--AGF---KNQSQIGNAYGTAVVIVMLATTL 458 (792)
Q Consensus 412 ~GQIYIP~vNw~Lmi~~l-~vv--~~F---~~s~~l~~AYGiAV~~~M~iTT~ 458 (792)
+| .|..--++...+- ++. ..| ++-+.+.+.+.+......+++.+
T Consensus 318 ~~---~P~~a~~~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 367 (426)
T PF13520_consen 318 FG---TPYNAIILVAVISSILLLLFLFIPQSSFDILVSLSSVGYLISYILVIL 367 (426)
T ss_dssp SS---SCHHHHHHHHHHHHHHHHHTTTSSSSHHHHHHHHHHHHTHHHHHHHHH
T ss_pred cC---CceeeehhhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 2554443333332 222 223 23456677776666666666533
No 13
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=74.80 E-value=36 Score=39.13 Aligned_cols=19 Identities=26% Similarity=0.324 Sum_probs=13.5
Q ss_pred CcHHHHHHHHHHHhhhhhh
Q 003831 501 GWVPLVIAAAFLVIMYVWH 519 (792)
Q Consensus 501 GW~pl~la~v~~~iM~~W~ 519 (792)
-|.+++++++++....-|-
T Consensus 434 ny~~~~~~~~~~~~~~~~~ 452 (474)
T TIGR03813 434 RYVGLLIGLAALFVTAPFL 452 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3788888888776666555
No 14
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=74.30 E-value=22 Score=40.89 Aligned_cols=24 Identities=21% Similarity=0.505 Sum_probs=17.6
Q ss_pred CcHHHHHHHHHHHhhhhhhHhHHH
Q 003831 501 GWVPLVIAAAFLVIMYVWHYGTVK 524 (792)
Q Consensus 501 GW~pl~la~v~~~iM~~W~~G~~~ 524 (792)
-|.++++++++...+..|....++
T Consensus 454 ny~~~~~~~~~~~~~~~~~~~~r~ 477 (482)
T TIGR00907 454 NYAVVVFAGVLAISLVYWKYKGRK 477 (482)
T ss_pred ChHhHHHHHHHHHHHHHheEecee
Confidence 599999988888777777653333
No 15
>TIGR00930 2a30 K-Cl cotransporter.
Probab=74.06 E-value=1.2e+02 Score=38.80 Aligned_cols=25 Identities=16% Similarity=0.231 Sum_probs=18.3
Q ss_pred EehhHHHHHHHHHhhhccccccccc
Q 003831 220 VVLVAVVILVGLFSLQHYGTDRVGW 244 (792)
Q Consensus 220 Vv~is~~ILv~LF~iQ~~GT~kvg~ 244 (792)
+-.++++++++++++--+|....++
T Consensus 203 ~~iia~i~l~ll~~In~~Gvk~~ak 227 (953)
T TIGR00930 203 IRIYGTVTVVVLLGISFAGMEWENK 227 (953)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHH
Confidence 4457778888888888889854443
No 16
>PRK10655 potE putrescine transporter; Provisional
Probab=67.05 E-value=62 Score=36.65 Aligned_cols=43 Identities=16% Similarity=0.026 Sum_probs=25.0
Q ss_pred hhHHHHHHHHHhhhcccccccccc---hhhHHHHHHHHHHHhhhhh
Q 003831 222 LVAVVILVGLFSLQHYGTDRVGWL---FAPIVLLWFLLIGGIGMLN 264 (792)
Q Consensus 222 ~is~~ILv~LF~iQ~~GT~kvg~~---FgPIm~vWfl~i~~~Giyn 264 (792)
.+++++++.+..+.-+|+...+++ ..-..++-++.+.+.|++.
T Consensus 125 ~~~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~~ 170 (438)
T PRK10655 125 LATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWFW 170 (438)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666677888999997666553 3333334444444555443
No 17
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=66.95 E-value=82 Score=35.90 Aligned_cols=23 Identities=17% Similarity=0.176 Sum_probs=17.0
Q ss_pred hHHHHHHHHHhhhcccccccccc
Q 003831 223 VAVVILVGLFSLQHYGTDRVGWL 245 (792)
Q Consensus 223 is~~ILv~LF~iQ~~GT~kvg~~ 245 (792)
++++++..+..+.-+|+...+++
T Consensus 124 ~~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 124 ACIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH
Confidence 35566667888999998777664
No 18
>PRK15049 L-asparagine permease; Provisional
Probab=64.04 E-value=44 Score=39.04 Aligned_cols=22 Identities=14% Similarity=0.071 Sum_probs=16.0
Q ss_pred hHHHHHHHHHhhhccccccccc
Q 003831 223 VAVVILVGLFSLQHYGTDRVGW 244 (792)
Q Consensus 223 is~~ILv~LF~iQ~~GT~kvg~ 244 (792)
++.++++++.++.-+|....+.
T Consensus 147 ~~~~~~~l~~~iN~~gvk~~~~ 168 (499)
T PRK15049 147 FALAALTIVGTMNMIGVKWFAE 168 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4666777788888888766554
No 19
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=57.99 E-value=80 Score=34.42 Aligned_cols=54 Identities=15% Similarity=0.082 Sum_probs=38.6
Q ss_pred hhhhhhhchhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH----HHHHHHHhh
Q 003831 440 QIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLV----VECTYFSAV 493 (792)
Q Consensus 440 ~l~~AYGiAV~~~M~iTT~L~~lv~~~vw~~~~~~~~~~~~~F~~----ie~~f~sa~ 493 (792)
+-=..||.+|..+.++.++-++..+..+.+.+.+.++++.++++. +|-..+|+.
T Consensus 13 ~k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~ 70 (301)
T PF14362_consen 13 NKYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSI 70 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 334578889999999998888888888888876666666655544 555555543
No 20
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=56.22 E-value=66 Score=36.53 Aligned_cols=24 Identities=21% Similarity=0.354 Sum_probs=17.1
Q ss_pred hhHHHHHHHHHhhhcccccccccc
Q 003831 222 LVAVVILVGLFSLQHYGTDRVGWL 245 (792)
Q Consensus 222 ~is~~ILv~LF~iQ~~GT~kvg~~ 245 (792)
.+++++++.+..+.-+|....+++
T Consensus 123 ~~~~~~~~~~~~ln~~g~~~~~~i 146 (442)
T TIGR00908 123 LAALVFYIVFIGINILGVGEAAKL 146 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 455666677778888888777664
No 21
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]
Probab=53.09 E-value=20 Score=39.88 Aligned_cols=40 Identities=35% Similarity=0.751 Sum_probs=31.1
Q ss_pred HHhcCcceeeeecceeeeeccccc-----------------cccCCCCCCCcceehhh
Q 003831 285 FRRGGRDGWTSLGGIMLSITGTEA-----------------LFADLAHFPVSAIQIAF 325 (792)
Q Consensus 285 ~~~~~~~g~~~LG~V~L~iTGaEA-----------------LyADlGHFg~~~Ir~aw 325 (792)
+.|....|| +.|+|+|=+|||-| .|+|+|-||-.=+.+-|
T Consensus 287 ~tRKSt~gw-sIgnIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~vSi~F 343 (372)
T KOG3145|consen 287 FTRKSTVGW-SIGNILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLVSIFF 343 (372)
T ss_pred ceecccccc-ccccEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhHHHHH
Confidence 456677899 56999999999965 68999999976554433
No 22
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=48.57 E-value=2.6e+02 Score=33.39 Aligned_cols=45 Identities=24% Similarity=0.454 Sum_probs=26.8
Q ss_pred EehhHHHHHHHHHhhhccccccccc---chhhHHHHHHHHHHHhhhhh
Q 003831 220 VVLVAVVILVGLFSLQHYGTDRVGW---LFAPIVLLWFLLIGGIGMLN 264 (792)
Q Consensus 220 Vv~is~~ILv~LF~iQ~~GT~kvg~---~FgPIm~vWfl~i~~~Giyn 264 (792)
...+++++++++..+--+|+...++ .+.-+.++-++.+.+.|+..
T Consensus 161 ~~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~~ 208 (557)
T TIGR00906 161 PDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTK 208 (557)
T ss_pred chHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHhh
Confidence 3456677777777888899766554 34444444444445555543
No 23
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=48.14 E-value=74 Score=33.01 Aligned_cols=21 Identities=14% Similarity=0.377 Sum_probs=16.8
Q ss_pred CCcHHHHHHHHHHHhhhhhhH
Q 003831 500 GGWVPLVIAAAFLVIMYVWHY 520 (792)
Q Consensus 500 GGW~pl~la~v~~~iM~~W~~ 520 (792)
.+|+-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999888766653
No 24
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=45.71 E-value=2.4e+02 Score=32.11 Aligned_cols=45 Identities=13% Similarity=0.290 Sum_probs=26.2
Q ss_pred ehhHHHHHHHHHhhhccccc---ccccchhhHHHHHHHHHHHhhhhhc
Q 003831 221 VLVAVVILVGLFSLQHYGTD---RVGWLFAPIVLLWFLLIGGIGMLNI 265 (792)
Q Consensus 221 v~is~~ILv~LF~iQ~~GT~---kvg~~FgPIm~vWfl~i~~~GiynI 265 (792)
..+++++++.+..+.-+|.. |+...+.=+.++=++.+.++|++.+
T Consensus 128 ~~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~~ 175 (445)
T PRK11357 128 KFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWF 175 (445)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34566667777788988875 4444444333444445555666543
No 25
>PRK10249 phenylalanine transporter; Provisional
Probab=45.06 E-value=1.3e+02 Score=34.71 Aligned_cols=102 Identities=25% Similarity=0.272 Sum_probs=50.3
Q ss_pred hHHHHHHHHHhhhccccccccc---chhhHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHH--HHhcCcce-eeee
Q 003831 223 VAVVILVGLFSLQHYGTDRVGW---LFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRY--FRRGGRDG-WTSL 296 (792)
Q Consensus 223 is~~ILv~LF~iQ~~GT~kvg~---~FgPIm~vWfl~i~~~GiynI~~~~P~Vl~AlnP~ya~~f--~~~~~~~g-~~~L 296 (792)
++.++++++.++.-+|....++ .+.=+-++..+.+.++|++-+...++.- ..++.+.... +..++..| +..+
T Consensus 138 ~~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~ 215 (458)
T PRK10249 138 WAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGE--KASIDNLWRYGGFFATGWNGLILSL 215 (458)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--CCChhhccCCCCCCCCcHHHHHHHH
Confidence 4566677777888888876654 2333334444555555555433211110 1111111000 00122223 2344
Q ss_pred cceeeeecccccc--ccCCCCCCCcceehhhh
Q 003831 297 GGIMLSITGTEAL--FADLAHFPVSAIQIAFT 326 (792)
Q Consensus 297 G~V~L~iTGaEAL--yADlGHFg~~~Ir~aw~ 326 (792)
..++.+.+|-|.. .|+=-+-.+|.|-.|-.
T Consensus 216 ~~~~~af~G~e~~~~~a~E~~~P~k~iPrai~ 247 (458)
T PRK10249 216 AVIMFSFGGLELIGITAAEARDPEKSIPKAVN 247 (458)
T ss_pred HHHHHHHcCHHHHHHHHHHhcCHhhHHHHHHH
Confidence 5566778888865 55555566666665543
No 26
>PRK11021 putative transporter; Provisional
Probab=44.08 E-value=4.2e+02 Score=29.79 Aligned_cols=27 Identities=22% Similarity=0.270 Sum_probs=21.0
Q ss_pred EehhHHHHHHHHHhhhcccccccccch
Q 003831 220 VVLVAVVILVGLFSLQHYGTDRVGWLF 246 (792)
Q Consensus 220 Vv~is~~ILv~LF~iQ~~GT~kvg~~F 246 (792)
...+++++++.+..+.-+|....+++-
T Consensus 115 ~~~~~~~~~~~~~~ln~~Gv~~~~~~~ 141 (410)
T PRK11021 115 LLLAELLTLALLWLLNLRGASSSANLQ 141 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 356778888888999999988777643
No 27
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=40.54 E-value=25 Score=37.57 Aligned_cols=29 Identities=24% Similarity=0.654 Sum_probs=25.3
Q ss_pred cCCCcHHHHHHHHHHHhhhhhhHhHHHHH
Q 003831 498 DQGGWVPLVIAAAFLVIMYVWHYGTVKRY 526 (792)
Q Consensus 498 ~~GGW~pl~la~v~~~iM~~W~~G~~~~~ 526 (792)
.+|||..++.+.++..+..+|++--+.+.
T Consensus 259 i~~G~isiv~Gliiv~iLii~N~kvEv~A 287 (304)
T COG4059 259 IQGGWISIVAGLIIVLILIIWNRKVEVKA 287 (304)
T ss_pred cccchhhhHHHHHHHHHHHHhcchhhhhh
Confidence 48999999999999999999998665553
No 28
>PRK10746 putative transport protein YifK; Provisional
Probab=40.13 E-value=1.9e+02 Score=33.40 Aligned_cols=31 Identities=10% Similarity=0.084 Sum_probs=22.2
Q ss_pred ccccHHHHHHHHHhhcceeecccccchhhhhhcccCC
Q 003831 43 KKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPH 79 (792)
Q Consensus 43 ~~~~~~~~~~La~~alGVVyGDIGTSPLYv~~~~f~~ 79 (792)
++.+.+....+++++. |||.-+..-+..+..
T Consensus 10 r~L~~~~~~~i~ig~~------IGtGlf~~~g~~l~~ 40 (461)
T PRK10746 10 RGLEARHIELIALGGT------IGVGLFMGAASTLKW 40 (461)
T ss_pred ccCcHHHHHHHHHHhh------hhhhHHHHhHHHHHh
Confidence 4567777777777765 898888777777654
No 29
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=39.95 E-value=73 Score=36.70 Aligned_cols=43 Identities=9% Similarity=-0.060 Sum_probs=25.5
Q ss_pred ccCcchHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCc
Q 003831 359 IPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPR 401 (792)
Q Consensus 359 ~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr 401 (792)
..++...-+.+.+.+++.-+..+.+.+.--+..+.-+-|.+|+
T Consensus 278 ~g~~~~~~i~i~~~is~~~~~~~~~~~~sR~~~amardg~lP~ 320 (473)
T TIGR00905 278 VGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPK 320 (473)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH
Confidence 3444444343434444444555566666666677778899997
No 30
>PRK10238 aromatic amino acid transporter; Provisional
Probab=39.45 E-value=1.6e+02 Score=33.95 Aligned_cols=43 Identities=33% Similarity=0.353 Sum_probs=25.3
Q ss_pred ecceeeeeccccc--cccCCCCCCCcceehhhhHHHHHHHHhhhcc
Q 003831 296 LGGIMLSITGTEA--LFADLAHFPVSAIQIAFTVVVFPCLLLAYSG 339 (792)
Q Consensus 296 LG~V~L~iTGaEA--LyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~G 339 (792)
++.++.+.+|-|+ ..|.=-+-.+|.+-.|-.. +...+.+.|++
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~ 250 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIG 250 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHH
Confidence 4456677888887 3444445666777777542 23444455654
No 31
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=37.11 E-value=4.2e+02 Score=30.50 Aligned_cols=45 Identities=9% Similarity=-0.205 Sum_probs=30.6
Q ss_pred cccCcchHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCce
Q 003831 358 SIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRV 402 (792)
Q Consensus 358 ~~P~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr~ 402 (792)
...+|..+.+.+.+.++.+-+..+.+.++--+..+.-+-|.+|+.
T Consensus 273 ~~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 273 MVGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred HcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 344555555555566666666667777777777777789999964
No 32
>PRK11387 S-methylmethionine transporter; Provisional
Probab=36.92 E-value=2.2e+02 Score=32.91 Aligned_cols=30 Identities=10% Similarity=0.201 Sum_probs=18.5
Q ss_pred ccccHHHHHHHHHhhcceeecccccchhhhhhcccC
Q 003831 43 KKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFP 78 (792)
Q Consensus 43 ~~~~~~~~~~La~~alGVVyGDIGTSPLYv~~~~f~ 78 (792)
++.+.+....++.+++ |||..+........
T Consensus 14 r~L~~~~~~~l~ig~~------IG~Gif~~~g~~~~ 43 (471)
T PRK11387 14 RTMKVRHLVMLSLGGV------IGTGLFFNTGYIIS 43 (471)
T ss_pred hcCcHHHHHHHHHHhh------hhhHHHHHHHHHHH
Confidence 4566666666555533 88886666666554
No 33
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=34.88 E-value=1.4e+02 Score=34.16 Aligned_cols=23 Identities=22% Similarity=0.254 Sum_probs=16.1
Q ss_pred hhHHHHHHHHHhhhccccccccc
Q 003831 222 LVAVVILVGLFSLQHYGTDRVGW 244 (792)
Q Consensus 222 ~is~~ILv~LF~iQ~~GT~kvg~ 244 (792)
.+.+++++.+..+.-+|+...++
T Consensus 127 ~~~~~~~~~~~~ln~~gvk~~~~ 149 (445)
T PRK10644 127 ITCVVVLWIFVLLNIVGPKMITR 149 (445)
T ss_pred HHHHHHHHHHHHHHHhchHHHHH
Confidence 34556666777888888866655
No 34
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=34.17 E-value=3.3e+02 Score=32.09 Aligned_cols=46 Identities=15% Similarity=0.185 Sum_probs=23.8
Q ss_pred ceeeeecccccc--ccCCCCCCCcceehhhhHHHHHHHHhhhccchhh
Q 003831 298 GIMLSITGTEAL--FADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAY 343 (792)
Q Consensus 298 ~V~L~iTGaEAL--yADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ 343 (792)
+++.+.+|-|+. .|+==+--+|.+-.|-...+.-+.++.++|--++
T Consensus 202 ~~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~~~~i 249 (507)
T TIGR00910 202 AFIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIGGFSI 249 (507)
T ss_pred HHHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHHHHHH
Confidence 345567888865 4444445566665555443333444444443333
No 35
>PRK10580 proY putative proline-specific permease; Provisional
Probab=32.17 E-value=2.4e+02 Score=32.35 Aligned_cols=24 Identities=13% Similarity=0.220 Sum_probs=18.3
Q ss_pred CCCcHHHHHHHHHHHhhhhhhHhH
Q 003831 499 QGGWVPLVIAAAFLVIMYVWHYGT 522 (792)
Q Consensus 499 ~GGW~pl~la~v~~~iM~~W~~G~ 522 (792)
.+.++.+.++.+.+.+.+.++.-.
T Consensus 423 p~~~~~~~~~~~~~~~~~~~y~~~ 446 (457)
T PRK10580 423 PDTRISLYVGFAWIVLLLIGWMFK 446 (457)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 357778888888888888887653
No 36
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=29.72 E-value=5.1e+02 Score=29.94 Aligned_cols=104 Identities=13% Similarity=0.073 Sum_probs=47.6
Q ss_pred cceeeeecccccc--ccCCCCCCCcceehhhhHHHHHHHHhhhccchhhhcc--cCcc---cccccccc----ccCcchH
Q 003831 297 GGIMLSITGTEAL--FADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMN--HQDH---VVDAFYRS----IPDSIYW 365 (792)
Q Consensus 297 G~V~L~iTGaEAL--yADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~--~p~~---~~npFy~~----~P~~~~~ 365 (792)
..++.+.+|-|+. .|.==+-.+|.|..|-.. +.-...+-|+-....+.. .+++ .++||-.. --++...
T Consensus 218 ~~~~~af~G~e~~~~~a~E~knP~r~iPrai~~-~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 296 (469)
T PRK11049 218 QIAVFAFVGIELVGTTAAETKDPEKSLPRAINS-IPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAAS 296 (469)
T ss_pred HHHHHHHhcHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChhHHH
Confidence 3355667787764 333334556666666532 222333444433333221 1222 23555321 1122222
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcCCCCc
Q 003831 366 PVFIVATAAAIVASQATISATFSIIKQALALGCFPR 401 (792)
Q Consensus 366 P~~vlAtlAaIIASQA~ISg~FSii~Qai~Lg~fPr 401 (792)
-+.+++.++.+-+..+.+.+.=-+....-+-|.+|+
T Consensus 297 ~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~ 332 (469)
T PRK11049 297 VINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPK 332 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 223333333444444444455555555667899996
No 37
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=28.89 E-value=13 Score=38.15 Aligned_cols=67 Identities=25% Similarity=0.421 Sum_probs=49.8
Q ss_pred HHHHHH-HHHhHhcCcEEEeeecEEEecCCCchhHHHHHHHHHHH---HHhhccCCCcccccCCCCeEeeee
Q 003831 721 TDELEF-LNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAF---LRKICRENSVIFNVPHESLLNVGQ 788 (792)
Q Consensus 721 ~eEl~~-L~~A~eaGVvYIlG~~~vkak~~Ss~lKK~vIn~~Y~F---LRkN~R~~~~~L~IPh~~LlEVGM 788 (792)
.+|+.+ +++++++|+--++-.. .+.++=..+..|+-+||+|.- .+++.|.....+++|.++.+-||-
T Consensus 48 tpe~~~W~~e~k~~gi~v~vvSN-n~e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmVGD 118 (175)
T COG2179 48 TPELRAWLAELKEAGIKVVVVSN-NKESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMVGD 118 (175)
T ss_pred CHHHHHHHHHHHhcCCEEEEEeC-CCHHHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEEcc
Confidence 344444 6667888875544332 566666788899999988765 367888899999999999999984
No 38
>TIGR01773 GABAperm gamma-aminobutyrate permease. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity.
Probab=27.91 E-value=9.5e+02 Score=27.40 Aligned_cols=25 Identities=16% Similarity=0.220 Sum_probs=17.6
Q ss_pred hhHHHHHHHHHhhhcccccccccch
Q 003831 222 LVAVVILVGLFSLQHYGTDRVGWLF 246 (792)
Q Consensus 222 ~is~~ILv~LF~iQ~~GT~kvg~~F 246 (792)
.+++++++.+..+.-+|+...+.+-
T Consensus 128 ~~~~~~~~~~~~~n~~gv~~~~~~~ 152 (452)
T TIGR01773 128 LFSLILTIVLTLTNLYSVKSYGEFE 152 (452)
T ss_pred HHHHHHHHHHHHHHHHhcchhhHHH
Confidence 4566666667778888987776544
No 39
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=27.12 E-value=45 Score=38.87 Aligned_cols=90 Identities=20% Similarity=0.258 Sum_probs=57.7
Q ss_pred HcCCCCceeEEecCCcccC----ceeehhhHHHHHHHhhheeEeecCchhhhhhhhchhhHHHHHHHHHHHHHHH-----
Q 003831 395 ALGCFPRVKVVHTSKKFLG----QIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMI----- 465 (792)
Q Consensus 395 ~Lg~fPr~ki~hTS~~~~G----QIYIP~vNw~Lmi~~l~vv~~F~~s~~l~~AYGiAV~~~M~iTT~L~~lv~~----- 465 (792)
+.|-.||+-+...=++..| |+|+|.+= +..+-=|-.-=|-++-.+=-.++||.+..+||++...=.-
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L----iVilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrvS 300 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTL----IVILSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRVS 300 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhh----hhHHhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCcc
Confidence 3788999999988888887 99999752 1111112222345555666789999999999998865221
Q ss_pred HHHhhhhHHHHHHHHHHHH-HHHH
Q 003831 466 LVWRCHWILVLIFTALSLV-VECT 488 (792)
Q Consensus 466 ~vw~~~~~~~~~~~~~F~~-ie~~ 488 (792)
++.-.-+.+..+|+.+|++ +|-+
T Consensus 301 YVKAiDiYL~vCFvfVF~sLLEYA 324 (459)
T KOG3643|consen 301 YVKAIDVYLGVCFVFVFLSLLEYA 324 (459)
T ss_pred ceeeehhhhhHHHHHHHHHHHHHH
Confidence 1222334566677777765 4443
No 40
>TIGR03428 ureacarb_perm permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
Probab=24.06 E-value=1.1e+03 Score=27.06 Aligned_cols=25 Identities=24% Similarity=0.310 Sum_probs=17.6
Q ss_pred EehhHHHHHHHHHhhhccccccccc
Q 003831 220 VVLVAVVILVGLFSLQHYGTDRVGW 244 (792)
Q Consensus 220 Vv~is~~ILv~LF~iQ~~GT~kvg~ 244 (792)
...++.+++++..++.-+|+...++
T Consensus 144 ~~~~~~~~~~~~~~in~~g~k~~~~ 168 (475)
T TIGR03428 144 AVLLGSVLLVLTTVINCIGVEWMSR 168 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 3456666777788888889766554
No 41
>PF00324 AA_permease: Amino acid permease; InterPro: IPR004841 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [], [], []. These proteins seem to contain up to 12 transmembrane segments. The best conserved region in this family is located in the second transmembrane segment. This domain is found in a wide variety of permeases, as well as several hypothetical proteins. ; GO: 0006810 transport, 0055085 transmembrane transport, 0016020 membrane
Probab=22.50 E-value=63 Score=37.12 Aligned_cols=34 Identities=26% Similarity=0.293 Sum_probs=21.1
Q ss_pred eeeecceeeeecccc--ccccCCCCCCCcceehhhh
Q 003831 293 WTSLGGIMLSITGTE--ALFADLAHFPVSAIQIAFT 326 (792)
Q Consensus 293 ~~~LG~V~L~iTGaE--ALyADlGHFg~~~Ir~aw~ 326 (792)
|..+.-.+.+.+|-| +.+|+==.=-+|+|..|-.
T Consensus 203 ~~~~~~~~~af~G~e~~a~~a~E~k~P~k~IPra~~ 238 (478)
T PF00324_consen 203 FAALVFAFFAFVGFESIAILAEEAKNPRKTIPRATL 238 (478)
T ss_pred HHhhhhhhcccccccccccccccCCCchhhhhhHhh
Confidence 445556678888888 3455555556666755544
No 42
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=22.28 E-value=76 Score=25.69 Aligned_cols=28 Identities=18% Similarity=0.557 Sum_probs=14.6
Q ss_pred HHHHhhhhhhHhHHHHHHHHHhcCCChH
Q 003831 510 AFLVIMYVWHYGTVKRYEFEMHSKVSMA 537 (792)
Q Consensus 510 v~~~iM~~W~~G~~~~~~~~~~~~~~~~ 537 (792)
+++.....|.|-+++|.++|...++|++
T Consensus 20 ~~F~gi~~w~~~~~~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 20 VFFIGIVIWAYRPRNKKRFEEAANLPLD 47 (49)
T ss_pred HHHHHHHHHHHcccchhhHHHHHccCcc
Confidence 3333444555554445555555566665
No 43
>cd05900 Ig_Aggrecan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. Ig_Aggrecan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. These aggregates contribute to the tissue's load bearing properties. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Aggrecan has a wide distribution in connective tissue and extracellular matrices. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.
Probab=20.81 E-value=1.3e+02 Score=28.46 Aligned_cols=30 Identities=13% Similarity=0.317 Sum_probs=22.8
Q ss_pred CceEEEEEecCCCCCEEEEEEEeecccCCC
Q 003831 599 EERFLVKRIGPKNFHMFRCVARYGYKDLHK 628 (792)
Q Consensus 599 ~eR~~v~~~~~~~~~~yr~~~ryGy~d~~~ 628 (792)
+--+.+..+...+.|.|+|.+.+|.-|..+
T Consensus 73 ~asL~I~nl~~sDsG~Y~C~V~~g~~~~~~ 102 (112)
T cd05900 73 DATLEITELRSNDSGTYRCEVMHGIEDNYD 102 (112)
T ss_pred CcEEEEeecccccCEEEEEEEecCCCCcee
Confidence 334566667777789999999999887654
No 44
>TIGR01940 nqrE NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit. This model represents the NqrE subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump.
Probab=20.51 E-value=3.1e+02 Score=29.07 Aligned_cols=47 Identities=17% Similarity=0.302 Sum_probs=31.5
Q ss_pred HHHHHHHhhheeEeecCchhhhhhh--hchhhHHHHHHHHHHHHHHHHH
Q 003831 421 NWILMILCIAVTAGFKNQSQIGNAY--GTAVVIVMLATTLLMTLIMILV 467 (792)
Q Consensus 421 Nw~Lmi~~l~vv~~F~~s~~l~~AY--GiAV~~~M~iTT~L~~lv~~~v 467 (792)
|-..+.-.+.+.-...-|+++.||- |+||+.||.+++.+..++-..+
T Consensus 14 ~N~vl~~~LGlCp~l~vs~~~~~a~gmGlAvtfV~~~s~~~~~~i~~~i 62 (200)
T TIGR01940 14 ENMALSFFLGMCTFLAVSKKVSTAFGLGVAVTFVLTITVPINNLIYTYI 62 (200)
T ss_pred hhHHHHHHHhcCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444455555555677777766 6778899999998888776554
No 45
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=20.50 E-value=4.7e+02 Score=29.32 Aligned_cols=164 Identities=18% Similarity=0.203 Sum_probs=94.2
Q ss_pred eccccccccCCCCCCCcceehhhhHHHHHHHHhhhccchhhhcccCccccccccccccCcchHHHHHHHHHHHHHhhhhh
Q 003831 303 ITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQAT 382 (792)
Q Consensus 303 iTGaEALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~ll~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~ 382 (792)
.||.=||-||=+|+---.+-+.-. ++ +-.+.+.|.+..-+| .+- =+-+||+.+..=.+
T Consensus 44 ~s~SlaLLADa~Hml~D~~al~la----------l~--A~~~a~r~~~~~~Tf-----Gy~-----R~eiLaa~~nav~L 101 (296)
T COG1230 44 LTGSLALLADALHMLSDALALLLA----------LI--AIKLARRPATKRFTF-----GYK-----RLEILAAFLNALLL 101 (296)
T ss_pred HhccHHHHHhHHHHHHHHHHHHHH----------HH--HHHHhcCCCCCCCCc-----cHh-----HHHHHHHHHHHHHH
Confidence 478999999999987665432221 11 124556666555555 111 13567888888889
Q ss_pred hhhhhHHHHHHHHcCCCCceeEEecCCcccCceeehhhHHHHHHHhhheeEee-------c--C-chhhhhhhhchhhHH
Q 003831 383 ISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGF-------K--N-QSQIGNAYGTAVVIV 452 (792)
Q Consensus 383 ISg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F-------~--~-s~~l~~AYGiAV~~~ 452 (792)
|..++.+..+|++-=.=|. .|+. +++|.++.+++++-+ + + +.|+-.|| +-+.++
T Consensus 102 i~~s~~I~~EAi~R~~~P~--------------~i~~-~~ml~va~~GL~vN~~~a~ll~~~~~~~lN~r~a~-LHvl~D 165 (296)
T COG1230 102 IVVSLLILWEAIQRLLAPP--------------PIHY-SGMLVVAIIGLVVNLVSALLLHKGHEENLNMRGAY-LHVLGD 165 (296)
T ss_pred HHHHHHHHHHHHHHhcCCC--------------CCCc-cchHHHHHHHHHHHHHHHHHhhCCCcccchHHHHH-HHHHHH
Confidence 9999999999986322232 2344 566766666554322 1 2 57777777 555555
Q ss_pred HHHHHHHHHH--HHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCcHHHHHHHHHHHhhhhhhHhHHHHHHHHH
Q 003831 453 MLATTLLMTL--IMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEM 530 (792)
Q Consensus 453 M~iTT~L~~l--v~~~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~Kv~~GGW~pl~la~v~~~iM~~W~~G~~~~~~~~~ 530 (792)
++-+ +.+.+ +....|+|+ |+=.+++.++..+.+-|-++--+.-..+.
T Consensus 166 ~Lgs-v~vIia~i~i~~~~w~------------------------------~~Dpi~si~i~~lil~~a~~l~k~s~~iL 214 (296)
T COG1230 166 ALGS-VGVIIAAIVIRFTGWS------------------------------WLDPILSIVIALLILSSAWPLLKESLNIL 214 (296)
T ss_pred HHHH-HHHHHHHHHHHHhCCC------------------------------ccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5432 11111 112224443 44445566666666667666665555444
Q ss_pred hcCCC
Q 003831 531 HSKVS 535 (792)
Q Consensus 531 ~~~~~ 535 (792)
.+..|
T Consensus 215 le~~P 219 (296)
T COG1230 215 LEGVP 219 (296)
T ss_pred hhcCC
Confidence 44444
Done!