Your job contains 1 sequence.
>003834
MATPAAAGGGWYRARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLD
EPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGDKNVAMLVVSEGWAKVKEQ
GSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALL
DANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAGIQAPAVARRPAAIVDTDTEETN
GDVSAAEAVAPLNSAQRLAASTASAGQQSTDEPFALDAKYFTEMRVLNREVRIVLEGVDK
FKNLIGSVFYPDGETAKDLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRLR
MWTNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPK
IGNPRKDEKPAAYAREAREFLRTRLIGRQVNVQMEYSRKVVVEAAPVAAGAKGPAGTKGP
AGTKGQAAAKGPAGEESVGATETRIIDFGSIFLLSPIKGEGDDASAVAQSNAAGQPAGVN
VAELVVSRGLGNVINHRDFEERSNYYDALLAAEARAKAGKKGCYSSKEPPVMHIQDLTMA
PVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRNERYSN
EALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRI
PDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKKFWEVENFMFSKLVI
RKLPQFSNNLLL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003834
(792 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2159218 - symbol:Tudor2 "TUDOR-SN protein 2" s... 1610 1.1e-253 2
ZFIN|ZDB-GENE-030131-3124 - symbol:snd1 "staphylococcal n... 414 6.3e-88 3
MGI|MGI:1929266 - symbol:Snd1 "staphylococcal nuclease an... 406 5.7e-87 3
UNIPROTKB|Q863B3 - symbol:SND1 "Staphylococcal nuclease d... 404 7.8e-87 3
RGD|631340 - symbol:Snd1 "staphylococcal nuclease and tud... 405 2.0e-86 3
UNIPROTKB|Q66X93 - symbol:Snd1 "Staphylococcal nuclease d... 405 2.0e-86 3
UNIPROTKB|Q7KZF4 - symbol:SND1 "Staphylococcal nuclease d... 405 2.0e-86 3
UNIPROTKB|E2RH91 - symbol:SND1 "Uncharacterized protein" ... 405 1.1e-85 3
FB|FBgn0035121 - symbol:Tudor-SN "Tudor-SN" species:7227 ... 351 1.5e-80 3
UNIPROTKB|F1SML4 - symbol:SND1 "Uncharacterized protein" ... 307 4.0e-74 3
WB|WBGene00006626 - symbol:tsn-1 species:6239 "Caenorhabd... 306 1.1e-72 3
DICTYBASE|DDB_G0279659 - symbol:snd1 "Staphylococcus nucl... 329 2.1e-69 3
ASPGD|ASPL0000052132 - symbol:AN0242 species:162425 "Emer... 334 2.8e-65 3
UNIPROTKB|G5EHM8 - symbol:MGCH7_ch7g348 "Nuclease domain-... 306 2.3e-60 3
POMBASE|SPCC645.08c - symbol:snd1 "RNA-binding protein Sn... 299 1.8e-56 3
UNIPROTKB|H7C597 - symbol:SND1 "Staphylococcal nuclease d... 259 2.9e-21 1
POMBASE|SPBC19F8.04c - symbol:SPBC19F8.04c "nuclease" spe... 128 1.1e-05 2
TIGR_CMR|GSU_1199 - symbol:GSU_1199 "nuclease, putative" ... 117 0.00014 1
UNIPROTKB|A4RMK0 - symbol:LCL3 "Probable endonuclease LCL... 115 0.00082 1
>TAIR|locus:2159218 [details] [associations]
symbol:Tudor2 "TUDOR-SN protein 2" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA]
[GO:0016788 "hydrolase activity, acting on ester bonds"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0009686
"gibberellin biosynthetic process" evidence=IMP] [GO:0009845 "seed
germination" evidence=IMP] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009306 "protein secretion" evidence=IGI]
[GO:0009651 "response to salt stress" evidence=IGI;RCA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0006007 "glucose catabolic process"
evidence=RCA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR006021 InterPro:IPR016071 InterPro:IPR016685
Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS50830 SMART:SM00318
InterPro:IPR002999 GO:GO:0005783 GO:GO:0005829 GO:GO:0009506
EMBL:CP002688 GO:GO:0046686 GO:GO:0005635 GO:GO:0006950
GO:GO:0009306 GO:GO:0003723 GO:GO:0009845 GO:GO:0016788
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 EMBL:AB010069 Gene3D:2.40.50.90 GO:GO:0009686
SUPFAM:SSF50199 HOGENOM:HOG000173592 KO:K15979 OMA:RFYVQTV
EMBL:BT002044 IPI:IPI00517332 RefSeq:NP_200986.1 UniGene:At.21985
ProteinModelPortal:Q9FLT0 SMR:Q9FLT0 STRING:Q9FLT0 PRIDE:Q9FLT0
EnsemblPlants:AT5G61780.1 GeneID:836300 KEGG:ath:AT5G61780
TAIR:At5g61780 InParanoid:Q9FLT0 PhylomeDB:Q9FLT0
ProtClustDB:CLSN2686944 ArrayExpress:Q9FLT0 Genevestigator:Q9FLT0
Uniprot:Q9FLT0
Length = 985
Score = 1610 (571.8 bits), Expect = 1.1e-253, Sum P(2) = 1.1e-253
Identities = 315/466 (67%), Positives = 374/466 (80%)
Query: 1 MATPAAAGGGWYRARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLD 60
MAT AA W + RVKAV SGD LVITAL++ GPP EKT+TLSS++ P++ARRGG+D
Sbjct: 1 MATGAATENQWLKGRVKAVTSGDCLVITALTHNRAGPPPEKTITLSSLMAPKMARRGGID 60
Query: 61 EPFAWDSREFLRKLCIGKEVTFRVDYAVPNI-GREFGTVILGDKNVAMLVVSEGWAKVKE 119
EPFAW+SREFLRKLCIGKEV F+VDY V I GREFG+V LG++N+A LVV GWAKV+
Sbjct: 61 EPFAWESREFLRKLCIGKEVAFKVDYKVEAIAGREFGSVYLGNENLAKLVVQNGWAKVRR 120
Query: 120 QGSQ-KGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMA 178
G Q + + SP++AEL +LEEQA+ +G GRWSKVPGAAEASIRNLPPSA+GDS NF+AM
Sbjct: 121 PGQQNQDKVSPYIAELEQLEEQAQQEGFGRWSKVPGAAEASIRNLPPSAVGDSGNFDAMG 180
Query: 179 LLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAGXXXXXXX---XXXXXXXDTD 235
LL A+KG+PM+GIVEQ RDGST+RVYLLPEFQFVQVFVAG D D
Sbjct: 181 LLAASKGKPMEGIVEQVRDGSTIRVYLLPEFQFVQVFVAGLQAPSMGRRQSTQEAVVDPD 240
Query: 236 -TEETNGDVSAAEAVAPLNSAQRLXXXXXXXXXXXXDEPFALDAKYFTEMRVLNREVRIV 294
T +NGD SA E PL +AQRL D PFA++AKYFTE+RVLNR+VRIV
Sbjct: 241 VTATSNGDASA-ETRGPLTTAQRLAASAASSVEVSSD-PFAMEAKYFTELRVLNRDVRIV 298
Query: 295 LEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQA 354
LEGVDKF NLIGSV+Y DG+T KDL +ELVENGLAKY+EWSANM++E+AK++LKA +LQ
Sbjct: 299 LEGVDKFNNLIGSVYYSDGDTVKDLGLELVENGLAKYVEWSANMLDEEAKKKLKATELQC 358
Query: 355 KKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLS 414
KK R++MW NYVPP SNSKAIHDQNFTGKVVEVVSGDC++VADDSIP+G+ +AERRV LS
Sbjct: 359 KKNRVKMWANYVPPASNSKAIHDQNFTGKVVEVVSGDCLVVADDSIPFGSPMAERRVCLS 418
Query: 415 SIRCPKIGNPRKDEKPAAYAREAREFLRTRLIGRQVNVQMEYSRKV 460
SIR PK+GNPR++EKPA YAREA+EFLR +LIG +V VQMEYSRK+
Sbjct: 419 SIRSPKMGNPRREEKPAPYAREAKEFLRQKLIGMEVIVQMEYSRKI 464
Score = 856 (306.4 bits), Expect = 1.1e-253, Sum P(2) = 1.1e-253
Identities = 173/270 (64%), Positives = 209/270 (77%)
Query: 499 GATETRIIDFGSIFLLSPIKGEGDDASAVAQSNAAGQPAGVNVAELVVSRGLGNVINHRD 558
GA + R++DFGS+FL SP KG+ +AVA AA P G N+AEL++SRGLG V+ HRD
Sbjct: 474 GAGD-RVMDFGSVFLPSPTKGD----TAVA---AAATP-GANIAELIISRGLGTVVRHRD 524
Query: 559 FEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDLTMAPVKKARDFLPFLQRSRRI 618
FEERSN+YD +S+K+ P +HI DLT+A KKA+DFLP LQR +I
Sbjct: 525 FEERSNHYDALLAAEARAIAGKKNIHSAKDSPALHIADLTVASAKKAKDFLPSLQRINQI 584
Query: 619 PAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRNERYSNEALLLMRQKILQRDVEIE 678
AVVEYVLSGHRFK+ IPKE+CSIAF+FSGVRCPGR E YS EA+ LMR+KI+QRDVEI
Sbjct: 585 SAVVEYVLSGHRFKLYIPKESCSIAFAFSGVRCPGRGEPYSEEAIALMRRKIMQRDVEIV 644
Query: 679 VETVDRTGTFLGSLWE--SRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQ 736
VE VDRTGTFLGS+WE S+TN LLEAGLAK+QT FG+DRIP++H+LE AE+SAK+Q
Sbjct: 645 VENVDRTGTFLGSMWEKNSKTNAGTYLLEAGLAKMQTGFGADRIPEAHILEMAERSAKNQ 704
Query: 737 KLKIWENYVEGEEVSNGAA-VEGKQKEVLK 765
KLKIWENYVEGEEV NG++ VE +QKE LK
Sbjct: 705 KLKIWENYVEGEEVVNGSSKVETRQKETLK 734
Score = 132 (51.5 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 49/166 (29%), Positives = 81/166 (48%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EP++ +A +++ R+V IV+E VD+ +GS++ + +T + L+E GLAK
Sbjct: 622 EPYSEEAIALMRRKIMQRDVEIVVENVDRTGTFLGSMWEKNSKT--NAGTYLLEAGLAKM 679
Query: 332 -IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQS----NSKAIHDQNFTGKVV- 385
+ A+ + E L+ A+ AK +L++W NYV + +SK Q T KVV
Sbjct: 680 QTGFGADRIPE--AHILEMAERSAKNQKLKIWENYVEGEEVVNGSSKVETRQKETLKVVV 737
Query: 386 -EVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIG--NPRKDE 428
EV+ G V ++ + LS P IG NP+K +
Sbjct: 738 TEVLGGGRFYVQTVGDQKVASIQNQLAALSLKDAPIIGSFNPKKGD 783
Score = 116 (45.9 bits), Expect = 8.8e-96, Sum P(2) = 8.8e-96
Identities = 27/88 (30%), Positives = 48/88 (54%)
Query: 374 AIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAY 433
A +Q G+V V SGDC+++ + E+ + LSS+ PK+ ++P A+
Sbjct: 6 ATENQWLKGRVKAVTSGDCLVITALTHNRAGPPPEKTITLSSLMAPKMARRGGIDEPFAW 65
Query: 434 AREAREFLRTRLIGRQVNVQMEYSRKVV 461
E+REFLR IG++V +++Y + +
Sbjct: 66 --ESREFLRKLCIGKEVAFKVDYKVEAI 91
Score = 104 (41.7 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 30/108 (27%), Positives = 55/108 (50%)
Query: 655 NERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESR----TNVAVILLEAGLAK 710
++ ++ EA ++L RDV I +E VD+ +GS++ S ++ + L+E GLAK
Sbjct: 275 SDPFAMEAKYFTELRVLNRDVRIVLEGVDKFNNLIGSVYYSDGDTVKDLGLELVENGLAK 334
Query: 711 LQTSFGSDRIPDS--HLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAV 756
+ ++ + + L+ E K ++K+W NYV SN A+
Sbjct: 335 Y-VEWSANMLDEEAKKKLKATELQCKKNRVKMWANYVP--PASNSKAI 379
Score = 51 (23.0 bits), Expect = 3.1e-171, Sum P(3) = 3.1e-171
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 414 SSIRCPKIGNPRKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
S +RCP G P Y+ EA +R +++ R V + +E
Sbjct: 613 SGVRCPGRGEP--------YSEEAIALMRRKIMQRDVEIVVE 646
Score = 48 (22.0 bits), Expect = 6.5e-171, Sum P(3) = 6.5e-171
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 652 PGRNER---YSNEALLLMRQKILQRDVEIEVE 680
P R E+ Y+ EA +RQK++ +V +++E
Sbjct: 428 PRREEKPAPYAREAKEFLRQKLIGMEVIVQME 459
Score = 44 (20.5 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 14/57 (24%), Positives = 24/57 (42%)
Query: 607 DFLPFLQRSRRIP--AVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRNERYSNE 661
D + L S+ P +VE V G +V + E + +G++ P R S +
Sbjct: 177 DAMGLLAASKGKPMEGIVEQVRDGSTIRVYLLPEFQFVQVFVAGLQAPSMGRRQSTQ 233
Score = 41 (19.5 bits), Expect = 3.1e-171, Sum P(3) = 3.1e-171
Identities = 12/63 (19%), Positives = 29/63 (46%)
Query: 694 ESRTNVAVILLEAGLAKLQTSFG---SDRIPDSHLLEQAEKSAKSQKLKIWE-NYVEGEE 749
+ +V +L+ G+A+++ D+ LE+ + A+ + IWE ++ ++
Sbjct: 914 DDEISVNAAMLQEGIARMEKRRRWEPKDKQAALDALEKFQDEARKSRTGIWEYGDIQSDD 973
Query: 750 VSN 752
N
Sbjct: 974 EDN 976
Score = 39 (18.8 bits), Expect = 5.1e-171, Sum P(3) = 5.1e-171
Identities = 12/46 (26%), Positives = 18/46 (39%)
Query: 517 IKGEGDDASAVAQSNAAGQPAGVNVAELVVSRGLGNVINHRDFEER 562
+KG+G V A VN A L G+ + R +E +
Sbjct: 897 VKGQGTGTELVVTLIAVDDEISVNAAML--QEGIARMEKRRRWEPK 940
>ZFIN|ZDB-GENE-030131-3124 [details] [associations]
symbol:snd1 "staphylococcal nuclease domain
containing 1" species:7955 "Danio rerio" [GO:0016442 "RNA-induced
silencing complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0016788 "hydrolase activity, acting on ester bonds"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] InterPro:IPR002071
InterPro:IPR006021 InterPro:IPR016071 InterPro:IPR016685
Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS01284 PROSITE:PS50830
SMART:SM00318 InterPro:IPR002999 ZFIN:ZDB-GENE-030131-3124
GO:GO:0005737 GO:GO:0003676 GO:GO:0090305 GO:GO:0031047
GO:GO:0016442 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0004518 Gene3D:2.40.50.90 SUPFAM:SSF50199
GeneTree:ENSGT00510000047270 HOGENOM:HOG000173592
HOVERGEN:HBG057234 EMBL:BX897731 EMBL:BX855622 EMBL:BX890545
EMBL:CR931778 IPI:IPI00493820 UniGene:Dr.76177 SMR:Q5RGK8
Ensembl:ENSDART00000040405 InParanoid:Q5RGK8 Uniprot:Q5RGK8
Length = 913
Score = 414 (150.8 bits), Expect = 6.3e-88, Sum P(3) = 6.3e-88
Identities = 92/235 (39%), Positives = 137/235 (58%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 450 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 509
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 654
++ +KA+ F PFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 510 IS-GETQKAKQFFPFLQRAGRSEAVVEYVFSGSRLKLYMPKETCLITFLLAGIECPRGSR 568
Query: 655 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 706
N E YS EA+L ++ +LQR+VE+EVE++D+ G F+G L N++V L+E
Sbjct: 569 NMPGGMQVAEPYSEEAMLFTKELVLQREVEVEVESMDKAGNFIGWLHIEGVNLSVALVEN 628
Query: 707 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQK 761
L+K+ F ++R L AE+SA+ +K K+W NY E + E K++
Sbjct: 629 ALSKVH--FTAERSSYYKTLVSAEESARQRKEKLWANYEEKPKEEVAQVTEAKER 681
Score = 302 (111.4 bits), Expect = 6.3e-88, Sum P(3) = 6.3e-88
Identities = 75/196 (38%), Positives = 124/196 (63%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA +AK+FTE R+L R+V+I+LE + ++G++ +P+G +L L++ G A+
Sbjct: 243 EPFAAEAKFFTESRLLQRDVQIILESCPN-QVILGTILHPNGNIT-EL---LLKEGFARC 297
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + + A++ L+AA+ AK+ ++R+W +YV P +N D+ F KV++VV+ D
Sbjct: 298 VDWSMAVYTQGAEK-LRAAERSAKERKVRIWKDYVAPTANLDQ-KDRQFVAKVMQVVNAD 355
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKI-G---NPRKDEK--PA---AYAREAREFLR 442
I+V +S Y + ++LSSIR P++ G N KD++ P Y EAREFLR
Sbjct: 356 AIVVKLNSGEY------KTIHLSSIRPPRLEGEEKNKDKDKRFRPLYDIPYMFEAREFLR 409
Query: 443 TRLIGRQVNVQMEYSR 458
+LIG++VNV ++Y R
Sbjct: 410 KKLIGKKVNVTVDYIR 425
Score = 286 (105.7 bits), Expect = 6.3e-88, Sum P(3) = 6.3e-88
Identities = 83/219 (37%), Positives = 120/219 (54%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRG--GL-------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR G DEP+
Sbjct: 21 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGALARRAIQGQPDTKDTPDEPW 78
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REF+RK IGKEV F V+ P GRE+G V LG +N+A +V+EG A V+
Sbjct: 79 AFQAREFMRKKVIGKEVCFTVENKTPQ-GREYGMVYLGKDTSGENIAESLVAEGLAMVRR 137
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
+G +G +P L LE+QAK G WS+ G +IR+L + I + NF
Sbjct: 138 EGI-RGN-NPEQVRLCDLEDQAKSSKKGLWSE--GGGSHTIRDLKYT-IENPRNF----- 187
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+D+ +P+ I+E RDG +R LLP++ V V ++G
Sbjct: 188 VDSLHQKPVNAIIEHVRDGCMVRALLLPDYYLVTVMLSG 226
Score = 153 (58.9 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 59/245 (24%), Positives = 111/245 (45%)
Query: 537 AGVNVAELVVSRGLGNVINHRDFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
+G N+AE +V+ GL V R+ +N S+ I+D
Sbjct: 119 SGENIAESLVAEGLAMV--RREGIRGNNPEQVRLCDLEDQAKSSKKGLWSEGGGSHTIRD 176
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP---- 652
L ++ R+F+ L + + + A++E+V G + L+ + + SG++ P
Sbjct: 177 LKYT-IENPRNFVDSLHQ-KPVNAIIEHVRDGCMVRALLLPDYYLVTVMLSGIKSPTFKR 234
Query: 653 ---GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAG 707
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL+ G
Sbjct: 235 EADGSETPEPFAAEAKFFTESRLLQRDVQIILESCPNQ-VILGTILHPNGNITELLLKEG 293
Query: 708 LAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKKF 767
A+ + + L AE+SAK +K++IW++YV + A ++ K ++ + K
Sbjct: 294 FARCVDWSMAVYTQGAEKLRAAERSAKERKVRIWKDYV-----APTANLDQKDRQFVAKV 348
Query: 768 WEVEN 772
+V N
Sbjct: 349 MQVVN 353
Score = 150 (57.9 bits), Expect = 9.3e-14, Sum P(3) = 9.3e-14
Identities = 70/227 (30%), Positives = 99/227 (43%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLAR-----------RGGLDEP 62
A+V V + D++V+ N G KT+ LSSI PRL R D P
Sbjct: 346 AKVMQVVNADAIVVKL----NSG--EYKTIHLSSIRPPRLEGEEKNKDKDKRFRPLYDIP 399
Query: 63 FAWDSREFLRKLCIGKEVTFRVDY--AVPN---IG------REFGTVILGDKNVAMLVVS 111
+ +++REFLRK IGK+V VDY A N +G R TV +G N+A +VS
Sbjct: 400 YMFEAREFLRKKLIGKKVNVTVDYIRAATNAMEMGVPAFPERTCATVTIGGINIAEALVS 459
Query: 112 EGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDS 171
+G A V + S ELL E +A G G SK E I + + G++
Sbjct: 460 KGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS-GET 514
Query: 172 SNFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
GR + +VE GS L++Y+ E + +AG
Sbjct: 515 QKAKQFFPFLQRAGRS-EAVVEYVFSGSRLKLYMPKETCLITFLLAG 560
Score = 119 (46.9 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 31/94 (32%), Positives = 56/94 (59%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EP++ +A FT+ VL REV + +E +DK N IG + + +G +L++ LVEN L+K
Sbjct: 578 EPYSEEAMLFTKELVLQREVEVEVESMDKAGNFIGWL-HIEGV---NLSVALVENALSK- 632
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNY 365
+ ++A + L +A+ A++ + ++W NY
Sbjct: 633 VHFTAE--RSSYYKTLVSAEESARQRKEKLWANY 664
Score = 109 (43.4 bits), Expect = 4.4e-42, Sum P(2) = 4.4e-42
Identities = 37/98 (37%), Positives = 52/98 (53%)
Query: 366 VPPQ-SNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKI--- 421
VP Q +S+A Q G V V+SG IIV P G ER++NLS+IR +
Sbjct: 5 VPAQVQSSQASAPQLQRGIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGALARR 62
Query: 422 ---GNP-RKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
G P KD +A +AREF+R ++IG++V +E
Sbjct: 63 AIQGQPDTKDTPDEPWAFQAREFMRKKVIGKEVCFTVE 100
Score = 108 (43.1 bits), Expect = 5.6e-42, Sum P(2) = 5.6e-42
Identities = 49/199 (24%), Positives = 82/199 (41%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
DEP+A A+ F +V+ +EV +E G V+ + +++A LV GLA
Sbjct: 75 DEPWAFQAREFMRKKVIGKEVCFTVENKTPQGREYGMVYLGKDTSGENIAESLVAEGLAM 134
Query: 331 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTN-----------YV--PPQSNSKAIHD 377
+ R D QAK ++ +W+ Y P++ ++H
Sbjct: 135 VRREGIRGNNPEQVRLCDLED-QAKSSKKGLWSEGGGSHTIRDLKYTIENPRNFVDSLH- 192
Query: 378 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRK-DEKPAAYARE 436
Q ++E V C++ A +P + V LS I+ P E P +A E
Sbjct: 193 QKPVNAIIEHVRDGCMVRAL-LLPDYYLVT---VMLSGIKSPTFKREADGSETPEPFAAE 248
Query: 437 AREFLRTRLIGRQVNVQME 455
A+ F +RL+ R V + +E
Sbjct: 249 AKFFTESRLLQRDVQIILE 267
Score = 69 (29.3 bits), Expect = 7.0e-38, Sum P(2) = 7.0e-38
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 42 TLTLSSIITPRLARRG-GLD--EPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTV 98
T+ LS I +P R G + EPFA +++ F + ++V ++ + PN GT+
Sbjct: 221 TVMLSGIKSPTFKREADGSETPEPFAAEAKFFTESRLLQRDVQIILE-SCPN-QVILGTI 278
Query: 99 ILGDKNVAMLVVSEGWAK 116
+ + N+ L++ EG+A+
Sbjct: 279 LHPNGNITELLLKEGFAR 296
Score = 50 (22.7 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 413 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
L+ I CP+ P + Y+ EA F + ++ R+V V++E
Sbjct: 558 LAGIECPRGSRNMPGGMQVAEPYSEEAMLFTKELVLQREVEVEVE 602
Score = 44 (20.5 bits), Expect = 7.6e-48, Sum P(3) = 7.6e-48
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 729 AEKSAKSQKLKIW 741
A++SAKS +L IW
Sbjct: 884 AQESAKSARLNIW 896
Score = 39 (18.8 bits), Expect = 2.5e-47, Sum P(3) = 2.5e-47
Identities = 25/110 (22%), Positives = 47/110 (42%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTF---LG-SLWESRTNVAVILLEAGLAKLQT 713
Y EA +R+K++ + V + V+ + R T +G + RT V + +A+
Sbjct: 400 YMFEAREFLRKKLIGKKVNVTVDYI-RAATNAMEMGVPAFPERTCATVTIGGINIAEALV 458
Query: 714 SFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEV 763
S G + + + ++S+ +L E + NG + K KEV
Sbjct: 459 SKGLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEV 502
Score = 37 (18.1 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 344 KRRLKAADLQAKKTRLRMWTNYVPPQSNSKA 374
K + D++ +K +M T Y+ Q ++K+
Sbjct: 860 KEGMVMVDIRKEKYLQKMVTEYLNAQESAKS 890
>MGI|MGI:1929266 [details] [associations]
symbol:Snd1 "staphylococcal nuclease and tudor domain
containing 1" species:10090 "Mus musculus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016442
"RNA-induced silencing complex" evidence=IEA] [GO:0016788
"hydrolase activity, acting on ester bonds" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR002071 InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS01123
PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
MGI:MGI:1929266 GO:GO:0005739 GO:GO:0005634 GO:GO:0042470
GO:GO:0006355 GO:GO:0006351 GO:GO:0003676 GO:GO:0090305
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0004518 Gene3D:2.40.50.90 eggNOG:COG1525
SUPFAM:SSF50199 CTD:27044 GeneTree:ENSGT00510000047270
HOGENOM:HOG000173592 HOVERGEN:HBG057234 KO:K15979 OMA:IWKDYVA
OrthoDB:EOG45755W EMBL:AB021491 EMBL:AK088028 EMBL:AK161591
EMBL:BC007126 IPI:IPI00123129 RefSeq:NP_062750.2 UniGene:Mm.439987
ProteinModelPortal:Q78PY7 SMR:Q78PY7 DIP:DIP-32118N IntAct:Q78PY7
STRING:Q78PY7 PhosphoSite:Q78PY7 PaxDb:Q78PY7 PRIDE:Q78PY7
Ensembl:ENSMUST00000001460 GeneID:56463 KEGG:mmu:56463
UCSC:uc009bct.1 InParanoid:Q78PY7 NextBio:312718 Bgee:Q78PY7
Genevestigator:Q78PY7 GermOnline:ENSMUSG00000001424 Uniprot:Q78PY7
Length = 910
Score = 406 (148.0 bits), Expect = 5.7e-87, Sum P(3) = 5.7e-87
Identities = 95/242 (39%), Positives = 142/242 (58%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 447 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 506
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 654
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 507 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 565
Query: 655 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 706
N E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++V+L+E
Sbjct: 566 NLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHMDGANLSVLLVEQ 625
Query: 707 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG--EEVSNGAAVEGKQKEVL 764
L+K+ F ++R L AE++AK +K K+W +Y E EEV +E K++
Sbjct: 626 ALSKVH--FTAERSAYYKPLLSAEEAAKQRKEKVWAHYEERPVEEVM--PVLEEKERSAS 681
Query: 765 KK 766
K
Sbjct: 682 YK 683
Score = 317 (116.6 bits), Expect = 5.7e-87, Sum P(3) = 5.7e-87
Identities = 77/195 (39%), Positives = 125/195 (64%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA +AK+FTE R+L R+V+I+LE +NL+G++ +P+G +L L++ G A+
Sbjct: 242 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNLLGTILHPNGNIT-EL---LLKEGFARC 296
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + A++ L+AA+ AK+ RLR+W +YVPP +N D+ F KV++V++ D
Sbjct: 297 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVPPTANLDQ-KDKQFVAKVMQVLNAD 354
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 443
I+V +S Y + ++LSSIR P++ G+ +D+ +P Y EAREFLR
Sbjct: 355 AIVVKLNSGDY------KTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPYMFEAREFLRK 408
Query: 444 RLIGRQVNVQMEYSR 458
+LIG++VNV ++Y R
Sbjct: 409 KLIGKKVNVTVDYIR 423
Score = 271 (100.5 bits), Expect = 5.7e-87, Sum P(3) = 5.7e-87
Identities = 79/219 (36%), Positives = 116/219 (52%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR DEP+
Sbjct: 21 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPW 78
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +
Sbjct: 79 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLA-TRR 136
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
+G + +P L EEQAK G WS+ G +IR+L + I + +F
Sbjct: 137 EGMRAN--NPEQNRLSECEEQAKASKKGMWSE--GNGSHTIRDLKYT-IENPRHF----- 186
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+D++ +P+ I+E RDGS +R LLP V V ++G
Sbjct: 187 VDSHHQKPVNAIIEHVRDGSVVRALLLPGHHLVTVMLSG 225
Score = 159 (61.0 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 71/225 (31%), Positives = 97/225 (43%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLAR----------RGGLDEPF 63
A+V V + D++V+ N G KT+ LSSI PRL R D P+
Sbjct: 345 AKVMQVLNADAIVVKL----NSGD--YKTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPY 398
Query: 64 AWDSREFLRKLCIGKEVTFRVDY---------AVPNIG-REFGTVILGDKNVAMLVVSEG 113
+++REFLRK IGK+V VDY VP R TV +G N+A +VS+G
Sbjct: 399 MFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKG 458
Query: 114 WAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSN 173
A V + S ELL E +A G G SK E I + + GD+
Sbjct: 459 LATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS-GDTQK 513
Query: 174 FNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
GR + +VE GS L++YL E + +AG
Sbjct: 514 AKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLITFLLAG 557
Score = 141 (54.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 48/188 (25%), Positives = 87/188 (46%)
Query: 594 IQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP- 652
I+DL ++ R F+ + + A++E+V G + L+ + SG++CP
Sbjct: 173 IRDLKYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPGHHLVTVMLSGIKCPT 230
Query: 653 ------GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILL 704
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL
Sbjct: 231 FRRETDGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-LLGTILHPNGNITELLL 289
Query: 705 EAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVL 764
+ G A+ + + L AE+ AK ++L+IW +YV A ++ K K+ +
Sbjct: 290 KEGFARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYVPPT-----ANLDQKDKQFV 344
Query: 765 KKFWEVEN 772
K +V N
Sbjct: 345 AKVMQVLN 352
Score = 130 (50.8 bits), Expect = 2.3e-43, Sum P(2) = 2.3e-43
Identities = 54/199 (27%), Positives = 86/199 (43%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 75 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAT 134
Query: 331 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTN-----------Y-VPPQSNSKAIHD 377
E AN E++ RL + QAK ++ MW+ Y + + H
Sbjct: 135 RREGMRANNPEQN---RLSECEEQAKASKKGMWSEGNGSHTIRDLKYTIENPRHFVDSHH 191
Query: 378 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRK-DEKPAAYARE 436
Q ++E V D +V +P G+ L V LS I+CP E P +A E
Sbjct: 192 QKPVNAIIEHVR-DGSVVRALLLP-GHHLVT--VMLSGIKCPTFRRETDGSETPEPFAAE 247
Query: 437 AREFLRTRLIGRQVNVQME 455
A+ F +RL+ R V + +E
Sbjct: 248 AKFFTESRLLQRDVQIILE 266
Score = 115 (45.5 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 34/95 (35%), Positives = 57/95 (60%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPF+ +A FT+ VL REV + +E +DK N IG + + DG +L++ LVE L+K
Sbjct: 575 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWL-HMDGA---NLSVLLVEQALSK- 629
Query: 332 IEWSANMMEEDAKRR-LKAADLQAKKTRLRMWTNY 365
+ ++A E A + L +A+ AK+ + ++W +Y
Sbjct: 630 VHFTA---ERSAYYKPLLSAEEAAKQRKEKVWAHY 661
Score = 96 (38.9 bits), Expect = 8.4e-40, Sum P(2) = 8.4e-40
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------PR-KDEKPAAYA 434
G V V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 22 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPWA 79
Query: 435 REAREFLRTRLIGRQVNVQME 455
AREFLR +LIG++V +E
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE 100
Score = 62 (26.9 bits), Expect = 3.1e-36, Sum P(2) = 3.1e-36
Identities = 33/120 (27%), Positives = 55/120 (45%)
Query: 42 TLTLSSIITPRLARR-GGLD--EPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTV 98
T+ LS I P R G + EPFA +++ F + ++V ++ + N GT+
Sbjct: 220 TVMLSGIKCPTFRRETDGSETPEPFAAEAKFFTESRLLQRDVQIILE-SCHNQNL-LGTI 277
Query: 99 ILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQ-AKLQGLGRWSK-VPGAA 156
+ + N+ L++ EG+A+ + AE LR E+ AK + L W VP A
Sbjct: 278 LHPNGNITELLLKEGFARCVDWSIAVYTRG---AEKLRAAERFAKERRLRIWRDYVPPTA 334
Score = 52 (23.4 bits), Expect = 8.0e-49, Sum P(3) = 8.0e-49
Identities = 23/111 (20%), Positives = 55/111 (49%)
Query: 634 LIPKETCSIAFSFSGVRCPGRNERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLW 693
++P + AF+F ++ P ++E +A+ + + I + VE + + + +
Sbjct: 788 VLPAQATEYAFAF--IQVP-QDEDARTDAVDSVVRDIQNTQCLLNVEHLSASCPHVTLQF 844
Query: 694 -ESRTNVAVILLEAGLAKLQTSFGSD--RIPDSHLLEQAEKSAKSQKLKIW 741
+S+ +V + L++ GL ++ ++ +L A++SAKS +L +W
Sbjct: 845 ADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYL--NAQESAKSARLNLW 893
Score = 48 (22.0 bits), Expect = 1.6e-20, Sum P(3) = 1.6e-20
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 413 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 555 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 599
Score = 39 (18.8 bits), Expect = 1.8e-47, Sum P(3) = 1.8e-47
Identities = 22/108 (20%), Positives = 45/108 (41%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 715
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 398 YMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 457
Query: 716 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEV 763
G + + + ++S+ +L E + NG + K KEV
Sbjct: 458 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEV 499
>UNIPROTKB|Q863B3 [details] [associations]
symbol:SND1 "Staphylococcal nuclease domain-containing
protein 1" species:9913 "Bos taurus" [GO:0042470 "melanosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0016442 "RNA-induced silencing
complex" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR002071 InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS01123
PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
GO:GO:0005739 GO:GO:0005634 GO:GO:0042470 GO:GO:0006355
GO:GO:0006351 GO:GO:0003676 GO:GO:0090305 GO:GO:0031047
GO:GO:0016442 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0004518 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
EMBL:AY273893 EMBL:BC104504 IPI:IPI00695802 RefSeq:NP_991353.1
UniGene:Bt.61314 ProteinModelPortal:Q863B3 SMR:Q863B3 STRING:Q863B3
PRIDE:Q863B3 Ensembl:ENSBTAT00000014154 GeneID:404098
KEGG:bta:404098 CTD:27044 GeneTree:ENSGT00510000047270
HOGENOM:HOG000173592 HOVERGEN:HBG057234 KO:K15979 OMA:IWKDYVA
NextBio:20817543 ArrayExpress:Q863B3 Uniprot:Q863B3
Length = 910
Score = 404 (147.3 bits), Expect = 7.8e-87, Sum P(3) = 7.8e-87
Identities = 93/245 (37%), Positives = 140/245 (57%)
Query: 514 LSPIKGEGDDASAVAQSNAAGQP-AGVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXX 571
+ P D A ++ A G+N+AE +VS+GL VI +R D ++RS++YD
Sbjct: 422 IRPASPATDTVPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLA 481
Query: 572 XXXXXXXXXXXCYSSKEPPVMHIQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRF 631
+S KE P+ + D++ +KA+ FLPFLQR+ R AVVEYV SG R
Sbjct: 482 AEARAIKNGKGLHSKKEVPIHRVADIS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRL 540
Query: 632 KVLIPKETCSIAFSFSGVRCP--GRN--------ERYSNEALLLMRQKILQRDVEIEVET 681
K+ +PKETC I F +G+ CP RN E +S EA L ++ +LQR+VE+EVE+
Sbjct: 541 KLYLPKETCLITFLLAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVES 600
Query: 682 VDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIW 741
+D+ G F+G L N++V+L+E L+K+ F ++R L AE++AK +K K+W
Sbjct: 601 MDKAGNFIGWLHIDGANLSVLLVEHALSKVH--FTAERSAYYKSLLSAEEAAKQKKEKVW 658
Query: 742 ENYVE 746
+Y E
Sbjct: 659 AHYEE 663
Score = 308 (113.5 bits), Expect = 7.8e-87, Sum P(3) = 7.8e-87
Identities = 75/195 (38%), Positives = 123/195 (63%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L++ G A+
Sbjct: 242 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKEGFARC 296
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + A++ L+AA+ AK+ RLR+W +YV P +N D+ F KV++V++ D
Sbjct: 297 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVAPTANLDQ-KDKQFVAKVMQVLNAD 354
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 443
I+V +S Y + ++LSSIR P++ G +D+ +P Y EAREFLR
Sbjct: 355 AIVVKLNSGDY------KTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRK 408
Query: 444 RLIGRQVNVQMEYSR 458
+LIG++VNV ++Y R
Sbjct: 409 KLIGKKVNVTVDYIR 423
Score = 281 (104.0 bits), Expect = 7.8e-87, Sum P(3) = 7.8e-87
Identities = 79/219 (36%), Positives = 119/219 (54%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR + DEP+
Sbjct: 21 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAVAQPDAKDTPDEPW 78
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +
Sbjct: 79 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLA-TRR 136
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
+G + +P L EEQAK G WS+ G +IR+L + I + +F
Sbjct: 137 EGMRAN--NPEQNRLAECEEQAKASKKGMWSE--GNGSHTIRDLKYT-IENPRHF----- 186
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+D++ +P+ I+E RDGS +R LLP++ V V ++G
Sbjct: 187 VDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSG 225
Score = 161 (61.7 bits), Expect = 3.8e-15, Sum P(3) = 3.8e-15
Identities = 70/225 (31%), Positives = 97/225 (43%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDE----------PF 63
A+V V + D++V+ N G KT+ LSSI PRL D+ P+
Sbjct: 345 AKVMQVLNADAIVVKL----NSGD--YKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPY 398
Query: 64 AWDSREFLRKLCIGKEVTFRVDY---------AVPNIG-REFGTVILGDKNVAMLVVSEG 113
+++REFLRK IGK+V VDY VP R TV +G N+A +VS+G
Sbjct: 399 MFEAREFLRKKLIGKKVNVTVDYIRPASPATDTVPAFSERTCATVTIGGINIAEALVSKG 458
Query: 114 WAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSN 173
A V + S ELL E +A G G SK E I + + GD+
Sbjct: 459 LATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS-GDTQK 513
Query: 174 FNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
GR + +VE GS L++YL E + +AG
Sbjct: 514 AKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLITFLLAG 557
Score = 147 (56.8 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 48/188 (25%), Positives = 89/188 (47%)
Query: 594 IQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP- 652
I+DL ++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 173 IRDLKYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPT 230
Query: 653 ------GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILL 704
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL
Sbjct: 231 FRREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLL 289
Query: 705 EAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVL 764
+ G A+ + + L AE+ AK ++L+IW +YV + A ++ K K+ +
Sbjct: 290 KEGFARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYV-----APTANLDQKDKQFV 344
Query: 765 KKFWEVEN 772
K +V N
Sbjct: 345 AKVMQVLN 352
Score = 129 (50.5 bits), Expect = 4.9e-43, Sum P(2) = 4.9e-43
Identities = 55/199 (27%), Positives = 85/199 (42%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 75 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAT 134
Query: 331 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 388
E AN E++ RL + QAK ++ MW+ + S I D +T V
Sbjct: 135 RREGMRANNPEQN---RLAECEEQAKASKKGMWSE----GNGSHTIRDLKYTIENPRHFV 187
Query: 389 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 436
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 188 DSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSETPEPFAAE 247
Query: 437 AREFLRTRLIGRQVNVQME 455
A+ F +RL+ R V + +E
Sbjct: 248 AKFFTESRLLQRDVQIILE 266
Score = 116 (45.9 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 34/95 (35%), Positives = 58/95 (61%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPF+ +A FT+ VL REV + +E +DK N IG + + DG +L++ LVE+ L+K
Sbjct: 575 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWL-HIDGA---NLSVLLVEHALSK- 629
Query: 332 IEWSANMMEEDAK-RRLKAADLQAKKTRLRMWTNY 365
+ ++A E A + L +A+ AK+ + ++W +Y
Sbjct: 630 VHFTA---ERSAYYKSLLSAEEAAKQKKEKVWAHY 661
Score = 98 (39.6 bits), Expect = 8.9e-40, Sum P(2) = 8.9e-40
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPK------IGNP-RKDEKPAAYA 434
G V V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 22 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAVAQPDAKDTPDEPWA 79
Query: 435 REAREFLRTRLIGRQVNVQME 455
AREFLR +LIG++V +E
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE 100
Score = 63 (27.2 bits), Expect = 4.2e-36, Sum P(2) = 4.2e-36
Identities = 29/107 (27%), Positives = 52/107 (48%)
Query: 42 TLTLSSIITPRLARRG-GLD--EPFAWDSREFLRKLCIGKEVTFRVDYAV-PNIGREFGT 97
T+ LS I P R G + EPFA +++ F + ++V ++ NI GT
Sbjct: 220 TVMLSGIKCPTFRREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQNI---LGT 276
Query: 98 VILGDKNVAMLVVSEGWAK-------VKEQGSQKGEASPFLAELLRL 137
++ + N+ L++ EG+A+ V +G++K A+ A+ RL
Sbjct: 277 ILHPNGNITELLLKEGFARCVDWSIAVYTRGAEKLRAAERFAKERRL 323
Score = 49 (22.3 bits), Expect = 1.6e-48, Sum P(3) = 1.6e-48
Identities = 23/111 (20%), Positives = 54/111 (48%)
Query: 634 LIPKETCSIAFSFSGVRCPGRNERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLW 693
++P + AF+F ++ P ++E +A+ + + I + VE + + +
Sbjct: 788 VLPAQATEYAFAF--IQVP-QDEDARTDAVDSVVRDIQNTQCLLNVEHLSAGCPHVTLQF 844
Query: 694 -ESRTNVAVILLEAGLAKLQTSFGSD--RIPDSHLLEQAEKSAKSQKLKIW 741
+S+ +V + L++ GL ++ ++ +L A++SAKS +L +W
Sbjct: 845 ADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYL--NAQESAKSARLNLW 893
Score = 48 (22.0 bits), Expect = 2.6e-21, Sum P(3) = 2.6e-21
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 413 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 555 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 599
Score = 40 (19.1 bits), Expect = 1.4e-47, Sum P(3) = 1.4e-47
Identities = 22/108 (20%), Positives = 45/108 (41%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 715
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 398 YMFEAREFLRKKLIGKKVNVTVDYIRPASPATDTVPAFSERTCATVTIGGINIAEALVSK 457
Query: 716 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEV 763
G + + + ++S+ +L E + NG + K KEV
Sbjct: 458 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEV 499
>RGD|631340 [details] [associations]
symbol:Snd1 "staphylococcal nuclease and tudor domain containing
1" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016442 "RNA-induced silencing
complex" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
InterPro:IPR002071 InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS01123
PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
RGD:631340 GO:GO:0005634 GO:GO:0042470 GO:GO:0006355 GO:GO:0006351
GO:GO:0003676 GO:GO:0003713 GO:GO:0090305 GO:GO:0031047
GO:GO:0016442 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0004518 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
CTD:27044 HOVERGEN:HBG057234 KO:K15979 EMBL:AY697864 EMBL:BC072471
EMBL:U83883 IPI:IPI00471608 RefSeq:NP_073185.2 UniGene:Rn.36148
ProteinModelPortal:Q66X93 SMR:Q66X93 IntAct:Q66X93 STRING:Q66X93
PhosphoSite:Q66X93 PRIDE:Q66X93 GeneID:64635 KEGG:rno:64635
UCSC:RGD:631340 InParanoid:Q66X93 NextBio:613608
Genevestigator:Q66X93 GermOnline:ENSRNOG00000031173 Uniprot:Q66X93
Length = 909
Score = 405 (147.6 bits), Expect = 2.0e-86, Sum P(3) = 2.0e-86
Identities = 95/242 (39%), Positives = 142/242 (58%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 446 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 505
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 654
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 506 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 564
Query: 655 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 706
N E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++V+L+E
Sbjct: 565 NLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHMDGANLSVLLVEH 624
Query: 707 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG--EEVSNGAAVEGKQKEVL 764
L+K+ F ++R L AE++AK +K K+W +Y E EEV +E K++
Sbjct: 625 ALSKVH--FTAERSAYYKPLLSAEEAAKQRKEKVWAHYEEQPVEEVM--PVLEEKERSAS 680
Query: 765 KK 766
K
Sbjct: 681 YK 682
Score = 310 (114.2 bits), Expect = 2.0e-86, Sum P(3) = 2.0e-86
Identities = 75/195 (38%), Positives = 125/195 (64%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L++ G A+
Sbjct: 241 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKEGFARC 295
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + A++ L+AA+ AK+ RLR+W +YVPP +N D+ F KV++V++ D
Sbjct: 296 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVPPTANLDQ-KDKQFVAKVMQVLNAD 353
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 443
I+V +S Y + ++LSSIR P++ G+ +D+ +P Y EAREFLR
Sbjct: 354 AIVVKLNSGDY------KTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPYMFEAREFLRK 407
Query: 444 RLIGRQVNVQMEYSR 458
+LIG++V+V ++Y R
Sbjct: 408 KLIGKKVSVTVDYIR 422
Score = 274 (101.5 bits), Expect = 2.0e-86, Sum P(3) = 2.0e-86
Identities = 80/219 (36%), Positives = 117/219 (53%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR DEP+
Sbjct: 20 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPW 77
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +E
Sbjct: 78 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLASRRE 136
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
G + +P L EEQAK G WS+ G +IR+L + I + +F
Sbjct: 137 -GMRAN--NPEQNRLSECEEQAKASKKGMWSE--GNGSHTIRDLKYT-IENPRHF----- 185
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+D++ +P+ I+E RDGS +R LLP+ V V ++G
Sbjct: 186 VDSHHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSG 224
Score = 160 (61.4 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 71/225 (31%), Positives = 98/225 (43%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLAR----------RGGLDEPF 63
A+V V + D++V+ N G KT+ LSSI PRL R D P+
Sbjct: 344 AKVMQVLNADAIVVKL----NSGD--YKTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPY 397
Query: 64 AWDSREFLRKLCIGKEVTFRVDY---------AVPNIG-REFGTVILGDKNVAMLVVSEG 113
+++REFLRK IGK+V+ VDY VP R TV +G N+A +VS+G
Sbjct: 398 MFEAREFLRKKLIGKKVSVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKG 457
Query: 114 WAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSN 173
A V + S ELL E +A G G SK E I + + GD+
Sbjct: 458 LATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS-GDTQK 512
Query: 174 FNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
GR + +VE GS L++YL E + +AG
Sbjct: 513 AKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLITFLLAG 556
Score = 147 (56.8 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 58/244 (23%), Positives = 105/244 (43%)
Query: 538 GVNVAELVVSRGLGNVINHRDFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDL 597
G N+AE +V+ GL + R+ +N S+ I+DL
Sbjct: 119 GENIAESLVAEGLAS---RREGMRANNPEQNRLSECEEQAKASKKGMWSEGNGSHTIRDL 175
Query: 598 TMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP----- 652
++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 176 KYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSGIKCPTFRRE 233
Query: 653 --GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGL 708
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL+ G
Sbjct: 234 TDGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLLKEGF 292
Query: 709 AKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKKFW 768
A+ + + L AE+ AK ++L+IW +YV A ++ K K+ + K
Sbjct: 293 ARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYVPPT-----ANLDQKDKQFVAKVM 347
Query: 769 EVEN 772
+V N
Sbjct: 348 QVLN 351
Score = 133 (51.9 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 55/199 (27%), Positives = 85/199 (42%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 74 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAS 133
Query: 331 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 388
E AN E++ RL + QAK ++ MW+ + S I D +T V
Sbjct: 134 RREGMRANNPEQN---RLSECEEQAKASKKGMWSE----GNGSHTIRDLKYTIENPRHFV 186
Query: 389 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 436
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 187 DSHHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSGIKCPTFRRETDGSETPEPFAAE 246
Query: 437 AREFLRTRLIGRQVNVQME 455
A+ F +RL+ R V + +E
Sbjct: 247 AKFFTESRLLQRDVQIILE 265
Score = 116 (45.9 bits), Expect = 7.4e-28, Sum P(3) = 7.4e-28
Identities = 34/95 (35%), Positives = 58/95 (61%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPF+ +A FT+ VL REV + +E +DK N IG + + DG +L++ LVE+ L+K
Sbjct: 574 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWL-HMDGA---NLSVLLVEHALSK- 628
Query: 332 IEWSANMMEEDAKRR-LKAADLQAKKTRLRMWTNY 365
+ ++A E A + L +A+ AK+ + ++W +Y
Sbjct: 629 VHFTA---ERSAYYKPLLSAEEAAKQRKEKVWAHY 660
Score = 96 (38.9 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------PR-KDEKPAAYA 434
G V V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 21 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPWA 78
Query: 435 REAREFLRTRLIGRQVNVQME 455
AREFLR +LIG++V +E
Sbjct: 79 FPAREFLRKKLIGKEVCFTIE 99
Score = 63 (27.2 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 34/121 (28%), Positives = 55/121 (45%)
Query: 42 TLTLSSIITPRLARR-GGLD--EPFAWDSREFLRKLCIGKEVTFRVDYAV-PNIGREFGT 97
T+ LS I P R G + EPFA +++ F + ++V ++ NI GT
Sbjct: 219 TVMLSGIKCPTFRRETDGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQNI---LGT 275
Query: 98 VILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQ-AKLQGLGRWSK-VPGA 155
++ + N+ L++ EG+A+ + AE LR E+ AK + L W VP
Sbjct: 276 ILHPNGNITELLLKEGFARCVDWSIAVYTRG---AEKLRAAERFAKERRLRIWRDYVPPT 332
Query: 156 A 156
A
Sbjct: 333 A 333
Score = 52 (23.4 bits), Expect = 2.4e-48, Sum P(3) = 2.4e-48
Identities = 23/111 (20%), Positives = 55/111 (49%)
Query: 634 LIPKETCSIAFSFSGVRCPGRNERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLW 693
++P + AF+F ++ P ++E +A+ + + I + VE + + + +
Sbjct: 787 VLPAQATEYAFAF--IQVP-QDEDARTDAVDSVVRDIQNTQCLLNVEHLSASCPHVTLQF 843
Query: 694 -ESRTNVAVILLEAGLAKLQTSFGSD--RIPDSHLLEQAEKSAKSQKLKIW 741
+S+ +V + L++ GL ++ ++ +L A++SAKS +L +W
Sbjct: 844 ADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYL--NAQESAKSARLNLW 892
Score = 48 (22.0 bits), Expect = 7.6e-21, Sum P(3) = 7.6e-21
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 413 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 554 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 598
Score = 39 (18.8 bits), Expect = 5.5e-47, Sum P(3) = 5.5e-47
Identities = 22/108 (20%), Positives = 45/108 (41%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 715
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 397 YMFEAREFLRKKLIGKKVSVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 456
Query: 716 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEV 763
G + + + ++S+ +L E + NG + K KEV
Sbjct: 457 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEV 498
>UNIPROTKB|Q66X93 [details] [associations]
symbol:Snd1 "Staphylococcal nuclease domain-containing
protein 1" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR002071 InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS01123
PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
RGD:631340 GO:GO:0005634 GO:GO:0042470 GO:GO:0006355 GO:GO:0006351
GO:GO:0003676 GO:GO:0003713 GO:GO:0090305 GO:GO:0031047
GO:GO:0016442 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0004518 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
CTD:27044 HOVERGEN:HBG057234 KO:K15979 EMBL:AY697864 EMBL:BC072471
EMBL:U83883 IPI:IPI00471608 RefSeq:NP_073185.2 UniGene:Rn.36148
ProteinModelPortal:Q66X93 SMR:Q66X93 IntAct:Q66X93 STRING:Q66X93
PhosphoSite:Q66X93 PRIDE:Q66X93 GeneID:64635 KEGG:rno:64635
UCSC:RGD:631340 InParanoid:Q66X93 NextBio:613608
Genevestigator:Q66X93 GermOnline:ENSRNOG00000031173 Uniprot:Q66X93
Length = 909
Score = 405 (147.6 bits), Expect = 2.0e-86, Sum P(3) = 2.0e-86
Identities = 95/242 (39%), Positives = 142/242 (58%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 446 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 505
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 654
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 506 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 564
Query: 655 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 706
N E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++V+L+E
Sbjct: 565 NLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHMDGANLSVLLVEH 624
Query: 707 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG--EEVSNGAAVEGKQKEVL 764
L+K+ F ++R L AE++AK +K K+W +Y E EEV +E K++
Sbjct: 625 ALSKVH--FTAERSAYYKPLLSAEEAAKQRKEKVWAHYEEQPVEEVM--PVLEEKERSAS 680
Query: 765 KK 766
K
Sbjct: 681 YK 682
Score = 310 (114.2 bits), Expect = 2.0e-86, Sum P(3) = 2.0e-86
Identities = 75/195 (38%), Positives = 125/195 (64%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L++ G A+
Sbjct: 241 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKEGFARC 295
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + A++ L+AA+ AK+ RLR+W +YVPP +N D+ F KV++V++ D
Sbjct: 296 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVPPTANLDQ-KDKQFVAKVMQVLNAD 353
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 443
I+V +S Y + ++LSSIR P++ G+ +D+ +P Y EAREFLR
Sbjct: 354 AIVVKLNSGDY------KTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPYMFEAREFLRK 407
Query: 444 RLIGRQVNVQMEYSR 458
+LIG++V+V ++Y R
Sbjct: 408 KLIGKKVSVTVDYIR 422
Score = 274 (101.5 bits), Expect = 2.0e-86, Sum P(3) = 2.0e-86
Identities = 80/219 (36%), Positives = 117/219 (53%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR DEP+
Sbjct: 20 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPW 77
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +E
Sbjct: 78 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLASRRE 136
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
G + +P L EEQAK G WS+ G +IR+L + I + +F
Sbjct: 137 -GMRAN--NPEQNRLSECEEQAKASKKGMWSE--GNGSHTIRDLKYT-IENPRHF----- 185
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+D++ +P+ I+E RDGS +R LLP+ V V ++G
Sbjct: 186 VDSHHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSG 224
Score = 160 (61.4 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 71/225 (31%), Positives = 98/225 (43%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLAR----------RGGLDEPF 63
A+V V + D++V+ N G KT+ LSSI PRL R D P+
Sbjct: 344 AKVMQVLNADAIVVKL----NSGD--YKTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPY 397
Query: 64 AWDSREFLRKLCIGKEVTFRVDY---------AVPNIG-REFGTVILGDKNVAMLVVSEG 113
+++REFLRK IGK+V+ VDY VP R TV +G N+A +VS+G
Sbjct: 398 MFEAREFLRKKLIGKKVSVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKG 457
Query: 114 WAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSN 173
A V + S ELL E +A G G SK E I + + GD+
Sbjct: 458 LATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS-GDTQK 512
Query: 174 FNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
GR + +VE GS L++YL E + +AG
Sbjct: 513 AKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLITFLLAG 556
Score = 147 (56.8 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 58/244 (23%), Positives = 105/244 (43%)
Query: 538 GVNVAELVVSRGLGNVINHRDFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDL 597
G N+AE +V+ GL + R+ +N S+ I+DL
Sbjct: 119 GENIAESLVAEGLAS---RREGMRANNPEQNRLSECEEQAKASKKGMWSEGNGSHTIRDL 175
Query: 598 TMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP----- 652
++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 176 KYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSGIKCPTFRRE 233
Query: 653 --GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGL 708
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL+ G
Sbjct: 234 TDGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLLKEGF 292
Query: 709 AKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKKFW 768
A+ + + L AE+ AK ++L+IW +YV A ++ K K+ + K
Sbjct: 293 ARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYVPPT-----ANLDQKDKQFVAKVM 347
Query: 769 EVEN 772
+V N
Sbjct: 348 QVLN 351
Score = 133 (51.9 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 55/199 (27%), Positives = 85/199 (42%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 74 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAS 133
Query: 331 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 388
E AN E++ RL + QAK ++ MW+ + S I D +T V
Sbjct: 134 RREGMRANNPEQN---RLSECEEQAKASKKGMWSE----GNGSHTIRDLKYTIENPRHFV 186
Query: 389 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 436
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 187 DSHHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSGIKCPTFRRETDGSETPEPFAAE 246
Query: 437 AREFLRTRLIGRQVNVQME 455
A+ F +RL+ R V + +E
Sbjct: 247 AKFFTESRLLQRDVQIILE 265
Score = 116 (45.9 bits), Expect = 7.4e-28, Sum P(3) = 7.4e-28
Identities = 34/95 (35%), Positives = 58/95 (61%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPF+ +A FT+ VL REV + +E +DK N IG + + DG +L++ LVE+ L+K
Sbjct: 574 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWL-HMDGA---NLSVLLVEHALSK- 628
Query: 332 IEWSANMMEEDAKRR-LKAADLQAKKTRLRMWTNY 365
+ ++A E A + L +A+ AK+ + ++W +Y
Sbjct: 629 VHFTA---ERSAYYKPLLSAEEAAKQRKEKVWAHY 660
Score = 96 (38.9 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------PR-KDEKPAAYA 434
G V V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 21 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPWA 78
Query: 435 REAREFLRTRLIGRQVNVQME 455
AREFLR +LIG++V +E
Sbjct: 79 FPAREFLRKKLIGKEVCFTIE 99
Score = 63 (27.2 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 34/121 (28%), Positives = 55/121 (45%)
Query: 42 TLTLSSIITPRLARR-GGLD--EPFAWDSREFLRKLCIGKEVTFRVDYAV-PNIGREFGT 97
T+ LS I P R G + EPFA +++ F + ++V ++ NI GT
Sbjct: 219 TVMLSGIKCPTFRRETDGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQNI---LGT 275
Query: 98 VILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQ-AKLQGLGRWSK-VPGA 155
++ + N+ L++ EG+A+ + AE LR E+ AK + L W VP
Sbjct: 276 ILHPNGNITELLLKEGFARCVDWSIAVYTRG---AEKLRAAERFAKERRLRIWRDYVPPT 332
Query: 156 A 156
A
Sbjct: 333 A 333
Score = 52 (23.4 bits), Expect = 2.4e-48, Sum P(3) = 2.4e-48
Identities = 23/111 (20%), Positives = 55/111 (49%)
Query: 634 LIPKETCSIAFSFSGVRCPGRNERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLW 693
++P + AF+F ++ P ++E +A+ + + I + VE + + + +
Sbjct: 787 VLPAQATEYAFAF--IQVP-QDEDARTDAVDSVVRDIQNTQCLLNVEHLSASCPHVTLQF 843
Query: 694 -ESRTNVAVILLEAGLAKLQTSFGSD--RIPDSHLLEQAEKSAKSQKLKIW 741
+S+ +V + L++ GL ++ ++ +L A++SAKS +L +W
Sbjct: 844 ADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYL--NAQESAKSARLNLW 892
Score = 48 (22.0 bits), Expect = 7.6e-21, Sum P(3) = 7.6e-21
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 413 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 554 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 598
Score = 39 (18.8 bits), Expect = 5.5e-47, Sum P(3) = 5.5e-47
Identities = 22/108 (20%), Positives = 45/108 (41%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 715
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 397 YMFEAREFLRKKLIGKKVSVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 456
Query: 716 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEV 763
G + + + ++S+ +L E + NG + K KEV
Sbjct: 457 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEV 498
>UNIPROTKB|Q7KZF4 [details] [associations]
symbol:SND1 "Staphylococcal nuclease domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0042470 "melanosome" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR002071 InterPro:IPR006021
InterPro:IPR016071 InterPro:IPR016685 Pfam:PF00565
PIRSF:PIRSF017179 PROSITE:PS01123 PROSITE:PS01284 PROSITE:PS50830
SMART:SM00318 InterPro:IPR002999 EMBL:U22055 GO:GO:0005739
GO:GO:0005634 GO:GO:0005737 GO:GO:0042470 GO:GO:0019048
GO:GO:0006355 GO:GO:0006351 GO:GO:0003676 GO:GO:0090305
GO:GO:0003712 GO:GO:0031047 GO:GO:0016442 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0004518 Gene3D:2.40.50.90
eggNOG:COG1525 SUPFAM:SSF50199 CTD:27044 HOVERGEN:HBG057234
KO:K15979 OMA:IWKDYVA EMBL:BT009785 EMBL:BC017180 IPI:IPI00140420
PIR:I38968 RefSeq:NP_055205.2 UniGene:Hs.122523 PDB:2E6N PDB:2HQE
PDB:2HQX PDB:2O4X PDB:3BDL PDB:3OMC PDB:3OMG PDBsum:2E6N
PDBsum:2HQE PDBsum:2HQX PDBsum:2O4X PDBsum:3BDL PDBsum:3OMC
PDBsum:3OMG ProteinModelPortal:Q7KZF4 SMR:Q7KZF4 DIP:DIP-29613N
IntAct:Q7KZF4 STRING:Q7KZF4 PhosphoSite:Q7KZF4 DMDM:60415926
REPRODUCTION-2DPAGE:IPI00140420 PaxDb:Q7KZF4 PeptideAtlas:Q7KZF4
PRIDE:Q7KZF4 DNASU:27044 Ensembl:ENST00000354725 GeneID:27044
KEGG:hsa:27044 UCSC:uc003vmi.3 GeneCards:GC07P127292
HGNC:HGNC:30646 HPA:CAB019323 HPA:HPA002529 HPA:HPA002632
MIM:602181 neXtProt:NX_Q7KZF4 PharmGKB:PA162404053
InParanoid:Q7KZF4 OrthoDB:EOG45755W PhylomeDB:Q7KZF4 ChiTaRS:SND1
EvolutionaryTrace:Q7KZF4 GenomeRNAi:27044 NextBio:49626
ArrayExpress:Q7KZF4 Bgee:Q7KZF4 CleanEx:HS_SND1
Genevestigator:Q7KZF4 Uniprot:Q7KZF4
Length = 910
Score = 405 (147.6 bits), Expect = 2.0e-86, Sum P(3) = 2.0e-86
Identities = 95/242 (39%), Positives = 142/242 (58%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 447 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 506
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 654
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 507 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 565
Query: 655 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 706
N E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++V+L+E
Sbjct: 566 NLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHIDGANLSVLLVEH 625
Query: 707 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG--EEVSNGAAVEGKQKEVL 764
L+K+ F ++R L AE++AK +K K+W +Y E EEV +E K++
Sbjct: 626 ALSKVH--FTAERSSYYKSLLSAEEAAKQKKEKVWAHYEEQPVEEVM--PVLEEKERSAS 681
Query: 765 KK 766
K
Sbjct: 682 YK 683
Score = 308 (113.5 bits), Expect = 2.0e-86, Sum P(3) = 2.0e-86
Identities = 75/195 (38%), Positives = 123/195 (63%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L++ G A+
Sbjct: 242 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKEGFARC 296
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + A++ L+AA+ AK+ RLR+W +YV P +N D+ F KV++V++ D
Sbjct: 297 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVAPTANLDQ-KDKQFVAKVMQVLNAD 354
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 443
I+V +S Y + ++LSSIR P++ G +D+ +P Y EAREFLR
Sbjct: 355 AIVVKLNSGDY------KTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRK 408
Query: 444 RLIGRQVNVQMEYSR 458
+LIG++VNV ++Y R
Sbjct: 409 KLIGKKVNVTVDYIR 423
Score = 276 (102.2 bits), Expect = 2.0e-86, Sum P(3) = 2.0e-86
Identities = 78/219 (35%), Positives = 118/219 (53%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R +K V SG ++++ P GPP E+ + LS+I LARR DEP+
Sbjct: 21 RGIIKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEPW 78
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +
Sbjct: 79 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLA-TRR 136
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
+G + +P L EEQAK G WS+ G +IR+L + I + +F
Sbjct: 137 EGMRAN--NPEQNRLSECEEQAKAAKKGMWSE--GNGSHTIRDLKYT-IENPRHF----- 186
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+D++ +P+ I+E RDGS +R LLP++ V V ++G
Sbjct: 187 VDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSG 225
Score = 161 (61.7 bits), Expect = 7.6e-15, Sum P(3) = 7.6e-15
Identities = 70/225 (31%), Positives = 97/225 (43%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDE----------PF 63
A+V V + D++V+ N G KT+ LSSI PRL D+ P+
Sbjct: 345 AKVMQVLNADAIVVKL----NSGD--YKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPY 398
Query: 64 AWDSREFLRKLCIGKEVTFRVDY---------AVPNIG-REFGTVILGDKNVAMLVVSEG 113
+++REFLRK IGK+V VDY VP R TV +G N+A +VS+G
Sbjct: 399 MFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKG 458
Query: 114 WAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSN 173
A V + S ELL E +A G G SK E I + + GD+
Sbjct: 459 LATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS-GDTQK 513
Query: 174 FNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
GR + +VE GS L++YL E + +AG
Sbjct: 514 AKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLITFLLAG 557
Score = 147 (56.8 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 48/188 (25%), Positives = 89/188 (47%)
Query: 594 IQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP- 652
I+DL ++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 173 IRDLKYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPT 230
Query: 653 ------GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILL 704
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL
Sbjct: 231 FRREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLL 289
Query: 705 EAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVL 764
+ G A+ + + L AE+ AK ++L+IW +YV + A ++ K K+ +
Sbjct: 290 KEGFARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYV-----APTANLDQKDKQFV 344
Query: 765 KKFWEVEN 772
K +V N
Sbjct: 345 AKVMQVLN 352
Score = 129 (50.5 bits), Expect = 3.8e-43, Sum P(2) = 3.8e-43
Identities = 55/199 (27%), Positives = 84/199 (42%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 75 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAT 134
Query: 331 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 388
E AN E++ RL + QAK + MW+ + S I D +T V
Sbjct: 135 RREGMRANNPEQN---RLSECEEQAKAAKKGMWSE----GNGSHTIRDLKYTIENPRHFV 187
Query: 389 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 436
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 188 DSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSETPEPFAAE 247
Query: 437 AREFLRTRLIGRQVNVQME 455
A+ F +RL+ R V + +E
Sbjct: 248 AKFFTESRLLQRDVQIILE 266
Score = 116 (45.9 bits), Expect = 1.8e-27, Sum P(3) = 1.8e-27
Identities = 32/94 (34%), Positives = 56/94 (59%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPF+ +A FT+ VL REV + +E +DK N IG + + DG +L++ LVE+ L+K
Sbjct: 575 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWL-HIDGA---NLSVLLVEHALSK- 629
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNY 365
+ ++A + L +A+ AK+ + ++W +Y
Sbjct: 630 VHFTAE--RSSYYKSLLSAEEAAKQKKEKVWAHY 661
Score = 96 (38.9 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 31/81 (38%), Positives = 42/81 (51%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------P-RKDEKPAAYA 434
G + V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 22 GIIKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEPWA 79
Query: 435 REAREFLRTRLIGRQVNVQME 455
AREFLR +LIG++V +E
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE 100
Score = 63 (27.2 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 29/107 (27%), Positives = 52/107 (48%)
Query: 42 TLTLSSIITPRLARRG-GLD--EPFAWDSREFLRKLCIGKEVTFRVDYAV-PNIGREFGT 97
T+ LS I P R G + EPFA +++ F + ++V ++ NI GT
Sbjct: 220 TVMLSGIKCPTFRREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQNI---LGT 276
Query: 98 VILGDKNVAMLVVSEGWAK-------VKEQGSQKGEASPFLAELLRL 137
++ + N+ L++ EG+A+ V +G++K A+ A+ RL
Sbjct: 277 ILHPNGNITELLLKEGFARCVDWSIAVYTRGAEKLRAAERFAKERRL 323
Score = 48 (22.0 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 413 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 555 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 599
Score = 46 (21.3 bits), Expect = 1.1e-47, Sum P(3) = 1.1e-47
Identities = 13/50 (26%), Positives = 28/50 (56%)
Query: 694 ESRTNVAVILLEAGLAKLQTSFGSD--RIPDSHLLEQAEKSAKSQKLKIW 741
+S+ +V + L++ GL ++ ++ +L A++SAKS +L +W
Sbjct: 846 DSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYL--NAQESAKSARLNLW 893
Score = 39 (18.8 bits), Expect = 5.8e-47, Sum P(3) = 5.8e-47
Identities = 22/108 (20%), Positives = 45/108 (41%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 715
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 398 YMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 457
Query: 716 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEV 763
G + + + ++S+ +L E + NG + K KEV
Sbjct: 458 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEV 499
>UNIPROTKB|E2RH91 [details] [associations]
symbol:SND1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0016442
"RNA-induced silencing complex" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR002071 InterPro:IPR006021
InterPro:IPR016071 InterPro:IPR016685 Pfam:PF00565
PIRSF:PIRSF017179 PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318
InterPro:IPR002999 GO:GO:0005739 GO:GO:0003676 GO:GO:0090305
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0004518 Gene3D:2.40.50.90 SUPFAM:SSF50199
CTD:27044 GeneTree:ENSGT00510000047270 KO:K15979 OMA:IWKDYVA
EMBL:AAEX03009276 EMBL:AAEX03009275 RefSeq:XP_532436.3
Ensembl:ENSCAFT00000002687 GeneID:475204 KEGG:cfa:475204
Uniprot:E2RH91
Length = 910
Score = 405 (147.6 bits), Expect = 1.1e-85, Sum P(3) = 1.1e-85
Identities = 92/226 (40%), Positives = 136/226 (60%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 447 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 506
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 654
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 507 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 565
Query: 655 N--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEA 706
N E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++V+L+E
Sbjct: 566 NLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHIDSANLSVLLVEH 625
Query: 707 GLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG--EEV 750
L+K+ F ++R L AE++AK +K K+W +Y E EEV
Sbjct: 626 ALSKVH--FTAERSSYYKSLLSAEEAAKQKKEKVWAHYEEQPVEEV 669
Score = 308 (113.5 bits), Expect = 1.1e-85, Sum P(3) = 1.1e-85
Identities = 75/195 (38%), Positives = 123/195 (63%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L++ G A+
Sbjct: 242 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKEGFARC 296
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + A++ L+AA+ AK+ RLR+W +YV P +N D+ F KV++V++ D
Sbjct: 297 VDWSIAVYTRGAEK-LRAAERFAKERRLRIWRDYVAPTANLDQ-KDKQFVAKVMQVLNAD 354
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 443
I+V +S Y + ++LSSIR P++ G +D+ +P Y EAREFLR
Sbjct: 355 AIVVKLNSGDY------KTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRK 408
Query: 444 RLIGRQVNVQMEYSR 458
+LIG++VNV ++Y R
Sbjct: 409 KLIGKKVNVTVDYIR 423
Score = 269 (99.8 bits), Expect = 1.1e-85, Sum P(3) = 1.1e-85
Identities = 78/219 (35%), Positives = 117/219 (53%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR DE +
Sbjct: 21 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEAW 78
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +
Sbjct: 79 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLA-TRR 136
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
+G + +P L EEQAK G WS+ G +IR+L + I + +F
Sbjct: 137 EGMRAN--NPEQNRLSECEEQAKAAKKGMWSE--GNGSHTIRDLKYT-IENPRHF----- 186
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+D++ +P+ I+E RDGS +R LLP++ V V ++G
Sbjct: 187 VDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSG 225
Score = 161 (61.7 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 70/225 (31%), Positives = 97/225 (43%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDE----------PF 63
A+V V + D++V+ N G KT+ LSSI PRL D+ P+
Sbjct: 345 AKVMQVLNADAIVVKL----NSGD--YKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPY 398
Query: 64 AWDSREFLRKLCIGKEVTFRVDY---------AVPNIG-REFGTVILGDKNVAMLVVSEG 113
+++REFLRK IGK+V VDY VP R TV +G N+A +VS+G
Sbjct: 399 MFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKG 458
Query: 114 WAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSN 173
A V + S ELL E +A G G SK E I + + GD+
Sbjct: 459 LATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS-GDTQK 513
Query: 174 FNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
GR + +VE GS L++YL E + +AG
Sbjct: 514 AKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLITFLLAG 557
Score = 147 (56.8 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 48/188 (25%), Positives = 89/188 (47%)
Query: 594 IQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP- 652
I+DL ++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 173 IRDLKYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPT 230
Query: 653 ------GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILL 704
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL
Sbjct: 231 FRREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLL 289
Query: 705 EAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVL 764
+ G A+ + + L AE+ AK ++L+IW +YV + A ++ K K+ +
Sbjct: 290 KEGFARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWRDYV-----APTANLDQKDKQFV 344
Query: 765 KKFWEVEN 772
K +V N
Sbjct: 345 AKVMQVLN 352
Score = 121 (47.7 bits), Expect = 2.6e-42, Sum P(2) = 2.6e-42
Identities = 54/199 (27%), Positives = 83/199 (41%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
DE +A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 75 DEAWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAT 134
Query: 331 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 388
E AN E++ RL + QAK + MW+ + S I D +T V
Sbjct: 135 RREGMRANNPEQN---RLSECEEQAKAAKKGMWSE----GNGSHTIRDLKYTIENPRHFV 187
Query: 389 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 436
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 188 DSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSETPEPFAAE 247
Query: 437 AREFLRTRLIGRQVNVQME 455
A+ F +RL+ R V + +E
Sbjct: 248 AKFFTESRLLQRDVQIILE 266
Score = 111 (44.1 bits), Expect = 1.8e-26, Sum P(3) = 1.8e-26
Identities = 31/94 (32%), Positives = 56/94 (59%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPF+ +A FT+ VL REV + +E +DK N IG + ++A +L++ LVE+ L+K
Sbjct: 575 EPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHI---DSA-NLSVLLVEHALSK- 629
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNY 365
+ ++A + L +A+ AK+ + ++W +Y
Sbjct: 630 VHFTAE--RSSYYKSLLSAEEAAKQKKEKVWAHY 661
Score = 102 (41.0 bits), Expect = 2.6e-40, Sum P(2) = 2.6e-40
Identities = 33/81 (40%), Positives = 43/81 (53%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------P-RKDEKPAAYA 434
G V V+SG IIV P G ER++NLS+IR + P KD A+A
Sbjct: 22 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEAWA 79
Query: 435 REAREFLRTRLIGRQVNVQME 455
AREFLR +LIG++V +E
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE 100
Score = 63 (27.2 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 29/107 (27%), Positives = 52/107 (48%)
Query: 42 TLTLSSIITPRLARRG-GLD--EPFAWDSREFLRKLCIGKEVTFRVDYAV-PNIGREFGT 97
T+ LS I P R G + EPFA +++ F + ++V ++ NI GT
Sbjct: 220 TVMLSGIKCPTFRREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQNI---LGT 276
Query: 98 VILGDKNVAMLVVSEGWAK-------VKEQGSQKGEASPFLAELLRL 137
++ + N+ L++ EG+A+ V +G++K A+ A+ RL
Sbjct: 277 ILHPNGNITELLLKEGFARCVDWSIAVYTRGAEKLRAAERFAKERRL 323
Score = 49 (22.3 bits), Expect = 2.8e-47, Sum P(3) = 2.8e-47
Identities = 23/111 (20%), Positives = 54/111 (48%)
Query: 634 LIPKETCSIAFSFSGVRCPGRNERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLW 693
++P + AF+F ++ P ++E +A+ + + I + VE + + +
Sbjct: 788 VLPAQATEYAFAF--IQVP-QDEDARTDAVDSVVRDIQNTQCLLNVEHLSAGCPHVTLQF 844
Query: 694 -ESRTNVAVILLEAGLAKLQTSFGSD--RIPDSHLLEQAEKSAKSQKLKIW 741
+S+ +V + L++ GL ++ ++ +L A++SAKS +L +W
Sbjct: 845 ADSKGDVGLGLVKEGLVMVEVRKEKQFQKVITEYL--NAQESAKSARLNLW 893
Score = 48 (22.0 bits), Expect = 5.6e-20, Sum P(3) = 5.6e-20
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 413 LSSIRCPKIGN--PRKDEKPAAYAREAREFLRTRLIGRQVNVQME 455
L+ I CP+ P ++ ++ EA F + ++ R+V V++E
Sbjct: 555 LAGIECPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVE 599
Score = 39 (18.8 bits), Expect = 3.1e-46, Sum P(3) = 3.1e-46
Identities = 22/108 (20%), Positives = 45/108 (41%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 715
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 398 YMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 457
Query: 716 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEV 763
G + + + ++S+ +L E + NG + K KEV
Sbjct: 458 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEV 499
>FB|FBgn0035121 [details] [associations]
symbol:Tudor-SN "Tudor-SN" species:7227 "Drosophila
melanogaster" [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016788 "hydrolase activity, acting on ester bonds"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA;TAS] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR006021
InterPro:IPR016071 InterPro:IPR016685 Pfam:PF00565
PIRSF:PIRSF017179 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
GO:GO:0005875 EMBL:AE014296 GO:GO:0005811 GO:GO:0003676
GO:GO:0016788 GO:GO:0031047 GO:GO:0016442 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 Gene3D:2.40.50.90 SUPFAM:SSF50199
GeneTree:ENSGT00510000047270 KO:K15979 OMA:IWKDYVA
FlyBase:FBgn0035121 EMBL:BT003270 RefSeq:NP_612021.1 UniGene:Dm.795
PDB:2WAC PDBsum:2WAC SMR:Q9W0S7 IntAct:Q9W0S7 MINT:MINT-801242
STRING:Q9W0S7 EnsemblMetazoa:FBtr0072519 EnsemblMetazoa:FBtr0332107
GeneID:38045 KEGG:dme:Dmel_CG7008 UCSC:CG7008-RA CTD:38045
InParanoid:Q9W0S7 EvolutionaryTrace:Q9W0S7 GenomeRNAi:38045
NextBio:806702 Uniprot:Q9W0S7
Length = 926
Score = 351 (128.6 bits), Expect = 1.5e-80, Sum P(3) = 1.5e-80
Identities = 88/214 (41%), Positives = 121/214 (56%)
Query: 16 VKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL------DEPFAWDSRE 69
VK V SGD++VI A PP EK +T S ++ P+LARR G DEP+AW+SRE
Sbjct: 29 VKQVLSGDTVVIRATKG---APPPEKQITFSHVLAPKLARRPGAGGDETKDEPWAWESRE 85
Query: 70 FLRKLCIGKEVTFRVDYAVPNIGREFGTVILG-DK----NVAMLVVSEGWAKVKEQGSQK 124
FLRK IG EVTF D N RE+G V +G DK NV +V EG V+ +G
Sbjct: 86 FLRKKLIGVEVTFTFDKPA-NSNREYGFVWIGKDKETGENVVESIVREGLVSVRREGRPT 144
Query: 125 GEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANK 184
E L+ LE+QA+ G G+WS AA+ +RN+ S+ N L+D
Sbjct: 145 AEQQT----LIELEDQARAAGRGKWSPTASAAD-KVRNIK------WSHENPAHLVDIYG 193
Query: 185 GRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
G P++ I+E RDGST+R +LLP+F ++ + ++G
Sbjct: 194 GNPVKAIIEHVRDGSTVRAFLLPDFHYITLMISG 227
Score = 338 (124.0 bits), Expect = 1.5e-80, Sum P(3) = 1.5e-80
Identities = 80/240 (33%), Positives = 131/240 (54%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G NVAE +V++GL + +R D ++RS+ YD ++ K+ + + D
Sbjct: 456 GQNVAEAMVAKGLATCVRYRQDDDQRSSAYDQLIAAEQQAIKGLKGLHAKKDNATLRVND 515
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP---- 652
LT+ + +LP QR+ R A+VE+V SG R ++ +PK++C + F +G+ CP
Sbjct: 516 LTVDHSRIKVQYLPSWQRALRTEAIVEFVASGSRLRIFVPKDSCLVTFLLAGISCPRSSR 575
Query: 653 ----G----RNERYSNEALLLMRQKILQRDVEIEVETVDRTGT-FLGSLW-ESRTNVAVI 702
G E + +EAL R+++LQRDV + ++T D+ G+ +G LW +S N++V
Sbjct: 576 PALNGVPAQEGEPFGDEALTFTRERVLQRDVSVHIDTTDKAGSSVIGWLWTDSGANLSVA 635
Query: 703 LLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKE 762
L+E GLA++ F +++ L+ AE AK+ K IW NYVE EV V ++KE
Sbjct: 636 LVEEGLAEVH--FSAEKSEYYRQLKIAEDRAKAAKKNIWTNYVE--EVPKEKTVTEEEKE 691
Score = 251 (93.4 bits), Expect = 1.5e-80, Sum P(3) = 1.5e-80
Identities = 76/204 (37%), Positives = 113/204 (55%)
Query: 273 PFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKYI 332
PFA +A+Y+ E R+L R+V I LE V+ N IG++ YP G A+ L E GLAK +
Sbjct: 248 PFADEARYYVETRLLQRDVEIRLESVNN-SNFIGTILYPKGNIAESLLRE----GLAKCV 302
Query: 333 EWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVP--PQSNSKAIHDQNFTGKVVEVVSG 390
+WS +M+ + L+AA+ AK+ RLR W +Y P NSK +++F+G VVEV +G
Sbjct: 303 DWSMAVMKTGTDK-LRAAERFAKEKRLRQWQDYQAKTPAFNSK---EKDFSGTVVEVFNG 358
Query: 391 DCIIVADDSIPYGNALAERRVNLSSIRCPK-----IGN---------PR-KDEKPA---A 432
D I V + G ++V SSIR P+ +G PR K+ +P
Sbjct: 359 DAINVR---LSNGQV---KKVFFSSIRPPRDQRAVVGTDGEEIVKAPPRGKNYRPLYEIP 412
Query: 433 YAREAREFLRTRLIGRQVNVQMEY 456
+ +AREFLR +LI ++V ++Y
Sbjct: 413 HMFDAREFLRKKLINKKVQCNLDY 436
Score = 148 (57.2 bits), Expect = 3.7e-40, Sum P(3) = 3.7e-40
Identities = 44/129 (34%), Positives = 71/129 (55%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKF-KNLIGSVFYPDGETAKDLAMELVENGLAK 330
EPF +A FT RVL R+V + ++ DK ++IG ++ G +L++ LVE GLA+
Sbjct: 587 EPFGDEALTFTRERVLQRDVSVHIDTTDKAGSSVIGWLWTDSGA---NLSVALVEEGLAE 643
Query: 331 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVV--EVV 388
+ +SA E R+LK A+ +AK + +WTNYV K + ++ KVV V
Sbjct: 644 -VHFSAEKSEY--YRQLKIAEDRAKAAKKNIWTNYVEEVPKEKTVTEEEKEDKVVAERKV 700
Query: 389 SGDCIIVAD 397
+ + +IV +
Sbjct: 701 NYENVIVTE 709
Score = 148 (57.2 bits), Expect = 5.6e-39, Sum P(2) = 5.6e-39
Identities = 40/139 (28%), Positives = 71/139 (51%)
Query: 618 IPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRN------------ERYSNEALLL 665
+ A++E+V G + + + I SG+RCPG +++EA
Sbjct: 197 VKAIIEHVRDGSTVRAFLLPDFHYITLMISGIRCPGVKLDADGKPDLSVKVPFADEARYY 256
Query: 666 MRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDSHL 725
+ ++LQRDVEI +E+V+ + F+G++ + N+A LL GLAK + +
Sbjct: 257 VETRLLQRDVEIRLESVNNSN-FIGTILYPKGNIAESLLREGLAKCVDWSMAVMKTGTDK 315
Query: 726 LEQAEKSAKSQKLKIWENY 744
L AE+ AK ++L+ W++Y
Sbjct: 316 LRAAERFAKEKRLRQWQDY 334
Score = 132 (51.5 bits), Expect = 5.8e-16, Sum P(3) = 5.8e-16
Identities = 48/162 (29%), Positives = 75/162 (46%)
Query: 62 PFAWDSREFLRKLCIGKEVTFRVDYAVP---NIGREFG-TVILGDKNVAMLVVSEGWAKV 117
P +D+REFLRK I K+V +DY P N ++ TV +G +NVA +V++G A
Sbjct: 412 PHMFDAREFLRKKLINKKVQCNLDYISPPRENFPEKYCYTVSIGGQNVAEAMVAKGLATC 471
Query: 118 KEQGSQKGEASPFLAELLRLEEQAKLQGL-GRWSKVPGAAEASIRNLPPSAIGDSSNFNA 176
+ S +L+ E+QA ++GL G +K A + +L D S
Sbjct: 472 VRYRQDDDQRSSAYDQLIAAEQQA-IKGLKGLHAKKDNAT-LRVNDLTV----DHSRIKV 525
Query: 177 MALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
L + + IVE GS LR+++ + V +AG
Sbjct: 526 QYLPSWQRALRTEAIVEFVASGSRLRIFVPKDSCLVTFLLAG 567
Score = 99 (39.9 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 47/199 (23%), Positives = 81/199 (40%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFY-PDGETAKDLAMELVENGLA 329
DEP+A +++ F +++ EV + G V+ D ET +++ +V GL
Sbjct: 76 DEPWAWESREFLRKKLIGVEVTFTFDKPANSNREYGFVWIGKDKETGENVVESIVREGLV 135
Query: 330 KYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVS 389
E+ L+ A + + + N K H+ +V++
Sbjct: 136 SVRREGRPTAEQQTLIELEDQARAAGRGKWSPTASAADKVRNIKWSHEN--PAHLVDIYG 193
Query: 390 GD---CII--VADDSIPYGNALAERR---VNLSSIRCPKI-----GNPRKDEKPAAYARE 436
G+ II V D S L + + +S IRCP + G P K +A E
Sbjct: 194 GNPVKAIIEHVRDGSTVRAFLLPDFHYITLMISGIRCPGVKLDADGKPDLSVK-VPFADE 252
Query: 437 AREFLRTRLIGRQVNVQME 455
AR ++ TRL+ R V +++E
Sbjct: 253 ARYYVETRLLQRDVEIRLE 271
Score = 90 (36.7 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 378 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN-PRK--DE-KPAAY 433
++ +G V +V+SGD +++ G E+++ S + PK+ P DE K +
Sbjct: 23 KSLSGIVKQVLSGDTVVIRATK---GAPPPEKQITFSHVLAPKLARRPGAGGDETKDEPW 79
Query: 434 AREAREFLRTRLIGRQV 450
A E+REFLR +LIG +V
Sbjct: 80 AWESREFLRKKLIGVEV 96
Score = 76 (31.8 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 49/209 (23%), Positives = 88/209 (42%)
Query: 273 PFALDAKYFTEMRVLNREVRIVLEGVDKFK-NLIGSVFYPDGETAKDLAMELVENGLAKY 331
P DA+ F +++N++V+ L+ + + N Y +++A +V GLA
Sbjct: 412 PHMFDAREFLRKKLINKKVQCNLDYISPPRENFPEKYCYTVSIGGQNVAEAMVAKGLATC 471
Query: 332 IEWSANM-MEEDAKRRLKAAD---------LQAKKTRLRMWTNYVP-PQSNSKAIHDQNF 380
+ + + A +L AA+ L AKK + N + S K + ++
Sbjct: 472 VRYRQDDDQRSSAYDQLIAAEQQAIKGLKGLHAKKDNATLRVNDLTVDHSRIKVQYLPSW 531
Query: 381 -----TGKVVE-VVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAA-- 432
T +VE V SG + + +P + L L+ I CP+ P + PA
Sbjct: 532 QRALRTEAIVEFVASGSRLRIF---VPKDSCLVT--FLLAGISCPRSSRPALNGVPAQEG 586
Query: 433 --YAREAREFLRTRLIGRQVNVQMEYSRK 459
+ EA F R R++ R V+V ++ + K
Sbjct: 587 EPFGDEALTFTRERVLQRDVSVHIDTTDK 615
Score = 63 (27.2 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 42 TLTLSSIITP--RLARRGGLD----EPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGREF 95
TL +S I P +L G D PFA ++R ++ + ++V R++ +V N
Sbjct: 222 TLMISGIRCPGVKLDADGKPDLSVKVPFADEARYYVETRLLQRDVEIRLE-SVNN-SNFI 279
Query: 96 GTVILGDKNVAMLVVSEGWAK-------VKEQGSQKGEASPFLAELLRLEE 139
GT++ N+A ++ EG AK V + G+ K A+ A+ RL +
Sbjct: 280 GTILYPKGNIAESLLREGLAKCVDWSMAVMKTGTDKLRAAERFAKEKRLRQ 330
Score = 55 (24.4 bits), Expect = 6.7e-51, Sum P(3) = 6.7e-51
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 644 FSFSGVRCPGRNERYSNEALLLMRQKILQRDVEIEVETVDRTGT-FLGSLWESRTNV--A 700
++ + V P NE EAL + +L V++ VE + TG+ L +L + T V
Sbjct: 814 YALALVALPTDNED-KEEALRAFSEDVLNHKVQLNVE-LKVTGSPNLATLRDPTTKVDFG 871
Query: 701 VILLEAGLAKLQTSFGSDRIPDSHLLEQ---AEKSAKSQKLKIWE 742
L+ GL L G ++ + L++Q A+++A+ L IW+
Sbjct: 872 KQLVAEGLV-LAEQRGERKLKE--LVDQYKAAQEAARVAHLAIWK 913
>UNIPROTKB|F1SML4 [details] [associations]
symbol:SND1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002071 InterPro:IPR006021
InterPro:IPR016071 Pfam:PF00565 PROSITE:PS01284 PROSITE:PS50830
SMART:SM00318 GO:GO:0005739 GO:GO:0003676 GO:GO:0090305
GO:GO:0004518 Gene3D:2.40.50.90 SUPFAM:SSF50199
GeneTree:ENSGT00510000047270 EMBL:CU861978 EMBL:CU640389
EMBL:CU856688 Ensembl:ENSSSCT00000018062 OMA:XYRARVE Uniprot:F1SML4
Length = 594
Score = 307 (113.1 bits), Expect = 4.0e-74, Sum P(3) = 4.0e-74
Identities = 75/195 (38%), Positives = 123/195 (63%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA +AK+FTE R+L R+V+I+LE +N++G++ +P+G +L L+++G A+
Sbjct: 242 EPFAAEAKFFTESRLLQRDVQIILESCHN-QNILGTILHPNGNIT-EL---LLKDGFARC 296
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + A++ L+AA+ AK RLR+W +YV P +N D+ F KV++V++ D
Sbjct: 297 VDWSIAVYTRGAEK-LRAAERFAKDRRLRIWRDYVAPTANLDQ-KDKQFVAKVMQVLNAD 354
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKI-GNPRKDE----KPA---AYAREAREFLRT 443
I+V +S Y + ++LSSIR P++ G +D+ +P Y EAREFLR
Sbjct: 355 AIVVKLNSGDY------KTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFEAREFLRK 408
Query: 444 RLIGRQVNVQMEYSR 458
+LIG++VNV ++Y R
Sbjct: 409 KLIGKKVNVTVDYIR 423
Score = 282 (104.3 bits), Expect = 4.0e-74, Sum P(3) = 4.0e-74
Identities = 79/219 (36%), Positives = 119/219 (54%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR DEP+
Sbjct: 21 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEPW 78
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +
Sbjct: 79 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLA-TRR 136
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
+G + +P L EEQAK G WS+ G+ +IR+L + I + +F
Sbjct: 137 EGMRAN--NPEQNRLAECEEQAKAAKKGMWSE--GSGSQTIRDLKYT-IENPRHF----- 186
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+D++ +P+ I+E RDGS +R LLP++ V V ++G
Sbjct: 187 VDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSG 225
Score = 281 (104.0 bits), Expect = 4.0e-74, Sum P(3) = 4.0e-74
Identities = 62/149 (41%), Positives = 88/149 (59%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G+N+AE +VS+GL VI +R D ++RS++YD +S KE P+ + D
Sbjct: 447 GINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVAD 506
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 654
++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP R
Sbjct: 507 IS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGAR 565
Query: 655 N--------ERYSNEALLLMRQKILQRDV 675
N E +S EA L ++ +LQR+V
Sbjct: 566 NLPGLVQEGEPFSEEATLFTKELVLQREV 594
Score = 161 (61.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 70/225 (31%), Positives = 97/225 (43%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDE----------PF 63
A+V V + D++V+ N G KT+ LSSI PRL D+ P+
Sbjct: 345 AKVMQVLNADAIVVKL----NSGD--YKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPY 398
Query: 64 AWDSREFLRKLCIGKEVTFRVDY---------AVPNIG-REFGTVILGDKNVAMLVVSEG 113
+++REFLRK IGK+V VDY VP R TV +G N+A +VS+G
Sbjct: 399 MFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSKG 458
Query: 114 WAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSN 173
A V + S ELL E +A G G SK E I + + GD+
Sbjct: 459 LATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSK----KEVPIHRVADIS-GDTQK 513
Query: 174 FNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
GR + +VE GS L++YL E + +AG
Sbjct: 514 AKQFLPFLQRAGRS-EAVVEYVFSGSRLKLYLPKETCLITFLLAG 557
Score = 149 (57.5 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 58/244 (23%), Positives = 105/244 (43%)
Query: 538 GVNVAELVVSRGLGNVINHRDFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDL 597
G N+AE +V+ GL R+ +N S+ I+DL
Sbjct: 120 GENIAESLVAEGLAT---RREGMRANNPEQNRLAECEEQAKAAKKGMWSEGSGSQTIRDL 176
Query: 598 TMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP----- 652
++ R F+ + + A++E+V G + L+ + + SG++CP
Sbjct: 177 KYT-IENPRHFVDS-HHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRRE 234
Query: 653 --GRN--ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGL 708
G E ++ EA ++LQRDV+I +E+ LG++ N+ +LL+ G
Sbjct: 235 ADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQN-ILGTILHPNGNITELLLKDGF 293
Query: 709 AKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKKFW 768
A+ + + L AE+ AK ++L+IW +YV + A ++ K K+ + K
Sbjct: 294 ARCVDWSIAVYTRGAEKLRAAERFAKDRRLRIWRDYV-----APTANLDQKDKQFVAKVM 348
Query: 769 EVEN 772
+V N
Sbjct: 349 QVLN 352
Score = 133 (51.9 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 56/199 (28%), Positives = 85/199 (42%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
DEP+A A+ F +++ +EV +E G ++ +++A LV GLA
Sbjct: 75 DEPWAFPAREFLRKKLIGKEVCFTIENKTPQGREYGMIYLGKDTNGENIAESLVAEGLAT 134
Query: 331 YIE-WSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFT-GKVVEVV 388
E AN E++ RL + QAK + MW+ S S+ I D +T V
Sbjct: 135 RREGMRANNPEQN---RLAECEEQAKAAKKGMWSE----GSGSQTIRDLKYTIENPRHFV 187
Query: 389 SG------DCII--VADDSIPYGNALAER---RVNLSSIRCPKIGNPRK-DEKPAAYARE 436
+ II V D S+ L + V LS I+CP E P +A E
Sbjct: 188 DSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSETPEPFAAE 247
Query: 437 AREFLRTRLIGRQVNVQME 455
A+ F +RL+ R V + +E
Sbjct: 248 AKFFTESRLLQRDVQIILE 266
Score = 97 (39.2 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN------P-RKDEKPAAYA 434
G V V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 22 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEPWA 79
Query: 435 REAREFLRTRLIGRQVNVQME 455
AREFLR +LIG++V +E
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE 100
Score = 59 (25.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 42 TLTLSSIITPRLARRG-GLD--EPFAWDSREFLRKLCIGKEVTFRVDYAV-PNIGREFGT 97
T+ LS I P R G + EPFA +++ F + ++V ++ NI GT
Sbjct: 220 TVMLSGIKCPTFRREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCHNQNI---LGT 276
Query: 98 VILGDKNVAMLVVSEGWAK 116
++ + N+ L++ +G+A+
Sbjct: 277 ILHPNGNITELLLKDGFAR 295
Score = 50 (22.7 bits), Expect = 7.3e-22, Sum P(2) = 7.3e-22
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 272 EPFALDAKYFTEMRVLNREV 291
EPF+ +A FT+ VL REV
Sbjct: 575 EPFSEEATLFTKELVLQREV 594
Score = 39 (18.8 bits), Expect = 8.5e-49, Sum P(3) = 8.5e-49
Identities = 22/108 (20%), Positives = 45/108 (41%)
Query: 658 YSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSL--WESRTNVAVILLEAGLAKLQTSF 715
Y EA +R+K++ + V + V+ + ++ + RT V + +A+ S
Sbjct: 398 YMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVSK 457
Query: 716 GSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEV 763
G + + + ++S+ +L E + NG + K KEV
Sbjct: 458 GLATVI-RYRQDDDQRSSHYDELLA----AEARAIKNGKGLHSK-KEV 499
>WB|WBGene00006626 [details] [associations]
symbol:tsn-1 species:6239 "Caenorhabditis elegans"
[GO:0016442 "RNA-induced silencing complex" evidence=IEA;IPI]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016788
"hydrolase activity, acting on ester bonds" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0035195 "gene silencing
by miRNA" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR006021
InterPro:IPR016071 InterPro:IPR016685 Pfam:PF00565
PIRSF:PIRSF017179 PROSITE:PS50830 SMART:SM00318 InterPro:IPR002999
GO:GO:0005829 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0000003 GO:GO:0003676 GO:GO:0016788 GO:GO:0016442
GO:GO:0035195 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
EMBL:FO081114 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
GeneTree:ENSGT00510000047270 HOGENOM:HOG000173592 KO:K15979
OMA:IWKDYVA PIR:B88131 RefSeq:NP_494839.1 HSSP:P00644
ProteinModelPortal:Q19328 SMR:Q19328 STRING:Q19328 PaxDb:Q19328
EnsemblMetazoa:F10G7.2.1 EnsemblMetazoa:F10G7.2.2 GeneID:173811
KEGG:cel:CELE_F10G7.2 UCSC:F10G7.2.1 CTD:173811 WormBase:F10G7.2
InParanoid:Q19328 NextBio:881213 Uniprot:Q19328
Length = 914
Score = 306 (112.8 bits), Expect = 1.1e-72, Sum P(3) = 1.1e-72
Identities = 86/229 (37%), Positives = 128/229 (55%)
Query: 4 PAA--AGGGWYRARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARR----- 56
PAA A R VK+V SGD++++ P+ GPP E T+ LS++ PRL RR
Sbjct: 14 PAASSANPAVRRGLVKSVLSGDAVILQG--QPHNGPPPEWTVYLSNVTAPRLGRRPTDSA 71
Query: 57 -GGLDEPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD------KNVAMLV 109
DEP+AWDSRE+LR+ +G+ VTF D+ + GR+ G + LG +NVA
Sbjct: 72 SATPDEPYAWDSREYLRQKLVGQFVTFVRDFTATS-GRDHGRIYLGGTSPADAENVAEGA 130
Query: 110 VSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIG 169
VS G +V+ QG E S +LL L+EQAK G G+W+ G +IR++ +
Sbjct: 131 VSAGLLEVR-QGKVADEYS---TKLLELQEQAKSAGRGKWNSNAG----TIRDI--RWVI 180
Query: 170 DSSNFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
D N L+D +P+ ++E RDGST+R +LLP F+++ + ++G
Sbjct: 181 D----NPRELVDKYAQKPIDAVIEMVRDGSTVRAFLLPNFEYITLQLSG 225
Score = 297 (109.6 bits), Expect = 1.1e-72, Sum P(3) = 1.1e-72
Identities = 73/195 (37%), Positives = 117/195 (60%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
E F+ +AK+F E R+L R+V+I+LE +N +GS+ +P G A+ L E G AK
Sbjct: 242 EAFSEEAKFFAESRLLQRDVQIILESTSN-QNFVGSIVHPKGNIAESLLRE----GYAKC 296
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++WS + A++ L+ A+ QAK+ RLR+W +Y P S++ + + FTGKVVE+V D
Sbjct: 297 VDWSIGLCTGGAQK-LRDAERQAKEKRLRLWKSY-QPTSSAYSGDRKAFTGKVVEIVLSD 354
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPK-------IGNPRKDEKPA---AYAREAREFL 441
++V D G+ E +++LSSIR P+ G P + +P + +AREFL
Sbjct: 355 AVVVQKDD---GS---EVKLHLSSIRLPRESGDDKATGGPGRQFRPLYDIPFMFQAREFL 408
Query: 442 RTRLIGRQVNVQMEY 456
R RL+G++V +Q++Y
Sbjct: 409 RKRLLGKKVQIQIDY 423
Score = 266 (98.7 bits), Expect = 1.1e-72, Sum P(3) = 1.1e-72
Identities = 68/186 (36%), Positives = 99/186 (53%)
Query: 540 NVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSK--EPPVMH-IQ 595
N+AE ++SRGL V+ HR D E RS+ YD ++ K E H IQ
Sbjct: 445 NIAEGLISRGLSKVVRHRADDENRSSEYDTLLAAEANAEKGKKGLFADKTAEKKDTHRIQ 504
Query: 596 DLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--- 652
++T + KA+ FLP+LQR R VVE++ G R ++ IPKET I F G+ CP
Sbjct: 505 EIT-GDLAKAKQFLPYLQRGGRAEGVVEFLSGGSRLRIYIPKETVLITFLLGGINCPKGA 563
Query: 653 ---------GRNERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWES---RTNVA 700
G E +++EA R+ +LQ +V++EVE+ D+ G F+G L+ S T+ A
Sbjct: 564 RVGPGGVSTGAAEPFADEAAAFTRKLVLQHEVQLEVESTDKNGNFVGYLYVSPDGNTSRA 623
Query: 701 VILLEA 706
+ L EA
Sbjct: 624 INLSEA 629
Score = 156 (60.0 bits), Expect = 8.2e-35, Sum P(2) = 8.2e-35
Identities = 50/159 (31%), Positives = 75/159 (47%)
Query: 618 IPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPG-RN--------ERYSNEALLLMRQ 668
I AV+E V G + + I SGVR P RN E +S EA
Sbjct: 195 IDAVIEMVRDGSTVRAFLLPNFEYITLQLSGVRAPSTRNPNAADSRAEAFSEEAKFFAES 254
Query: 669 KILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAK-LQTSFGSDRIPDSHLLE 727
++LQRDV+I +E+ F+GS+ + N+A LL G AK + S G + L
Sbjct: 255 RLLQRDVQIILESTSNQN-FVGSIVHPKGNIAESLLREGYAKCVDWSIGLCT-GGAQKLR 312
Query: 728 QAEKSAKSQKLKIWENYVEGEEVSNG--AAVEGKQKEVL 764
AE+ AK ++L++W++Y +G A GK E++
Sbjct: 313 DAERQAKEKRLRLWKSYQPTSSAYSGDRKAFTGKVVEIV 351
Score = 148 (57.2 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 52/192 (27%), Positives = 84/192 (43%)
Query: 60 DEPFAWDSREFLRKLCIGKEVTFRVDYAVP---NIGREF-GTVILGDKNVAMLVVSEGWA 115
D PF + +REFLRK +GK+V ++DY P N + T+ +GD+N+A ++S G +
Sbjct: 397 DIPFMFQAREFLRKRLLGKKVQIQIDYVQPKSENFPEKTCATIKIGDQNIAEGLISRGLS 456
Query: 116 KV-KEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNF 174
KV + + + +S + LL E A+ G ++ AE + GD +
Sbjct: 457 KVVRHRADDENRSSEY-DTLLAAEANAEKGKKGLFADK--TAEKKDTHRIQEITGDLAKA 513
Query: 175 NAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAGXXXXXXXXXXXXXXDT 234
L +G +G+VE GS LR+Y+ E + + G T
Sbjct: 514 KQF-LPYLQRGGRAEGVVEFLSGGSRLRIYIPKETVLITFLLGGINCPKGARVGPGGVST 572
Query: 235 DTEETNGDVSAA 246
E D +AA
Sbjct: 573 GAAEPFADEAAA 584
Score = 145 (56.1 bits), Expect = 5.4e-60, Sum P(3) = 5.4e-60
Identities = 42/120 (35%), Positives = 64/120 (53%)
Query: 653 GRNERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLW------ESRT-NVAVILLE 705
G E +++EA R+ +LQ +V++EVE+ D+ G F+G L+ SR N++ L+E
Sbjct: 573 GAAEPFADEAAAFTRKLVLQHEVQLEVESTDKNGNFVGYLYVSPDGNTSRAINLSEALVE 632
Query: 706 AGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEG---EEVSNGAAVEGKQKE 762
GLA L F ++R + L AE AK K IW N+ E EEV A ++K+
Sbjct: 633 NGLASLH--FTAERSGHYNALLSAENKAKKAKKNIWANFTEEQHQEEVEVQQADTSERKQ 690
Score = 145 (56.1 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 37/101 (36%), Positives = 57/101 (56%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFY-PDGETAK--DLAMELVENGL 328
EPFA +A FT VL EV++ +E DK N +G ++ PDG T++ +L+ LVENGL
Sbjct: 576 EPFADEAAAFTRKLVLQHEVQLEVESTDKNGNFVGYLYVSPDGNTSRAINLSEALVENGL 635
Query: 329 AKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQ 369
A + ++A L +A+ +AKK + +W N+ Q
Sbjct: 636 AS-LHFTAE--RSGHYNALLSAENKAKKAKKNIWANFTEEQ 673
Score = 105 (42.0 bits), Expect = 4.7e-25, Sum P(2) = 4.7e-25
Identities = 53/214 (24%), Positives = 89/214 (41%)
Query: 254 SAQRLXXXXXXXXXXXXDEPFALDAKYFTEMRVLNREVRIVLE-----GVDKFKNLIGSV 308
+A RL DEP+A D++ + +++ + V V + G D + +G
Sbjct: 59 TAPRLGRRPTDSASATPDEPYAWDSREYLRQKLVGQFVTFVRDFTATSGRDHGRIYLGGT 118
Query: 309 FYPDGETAKDLAME--LVENGLAKYI-EWSANMME--EDAKRRLKAA-DLQAKKTRLRMW 362
D E + A+ L+E K E+S ++E E AK + + A R W
Sbjct: 119 SPADAENVAEGAVSAGLLEVRQGKVADEYSTKLLELQEQAKSAGRGKWNSNAGTIRDIRW 178
Query: 363 TNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIG 422
P + K + Q V+E+V D V +P + + LS +R P
Sbjct: 179 VIDNPRELVDK--YAQKPIDAVIEMVR-DGSTVRAFLLPNFEYIT---LQLSGVRAPSTR 232
Query: 423 NPRK-DEKPAAYAREAREFLRTRLIGRQVNVQME 455
NP D + A++ EA+ F +RL+ R V + +E
Sbjct: 233 NPNAADSRAEAFSEEAKFFAESRLLQRDVQIILE 266
Score = 104 (41.7 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 31/99 (31%), Positives = 50/99 (50%)
Query: 363 TNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIG 422
T VPP + S A + G V V+SGD +I+ P+ E V LS++ P++G
Sbjct: 8 TPTVPPPAASSA-NPAVRRGLVKSVLSGDAVILQGQ--PHNGPPPEWTVYLSNVTAPRLG 64
Query: 423 NPRKDEKPAA----YAREAREFLRTRLIGRQVNVQMEYS 457
D A YA ++RE+LR +L+G+ V +++
Sbjct: 65 RRPTDSASATPDEPYAWDSREYLRQKLVGQFVTFVRDFT 103
Score = 71 (30.1 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 27/118 (22%), Positives = 55/118 (46%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVD-KFKNLIGSVFYPDGETAKDLAMELVENGLA 329
D PF A+ F R+L ++V+I ++ V K +N +++A L+ GL+
Sbjct: 397 DIPFMFQAREFLRKRLLGKKVQIQIDYVQPKSENFPEKTCATIKIGDQNIAEGLISRGLS 456
Query: 330 KYIEWSANMMEEDAKR-RLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVE 386
K + A+ ++ L AA+ A+K + ++ + + ++ I Q TG + +
Sbjct: 457 KVVRHRADDENRSSEYDTLLAAEANAEKGKKGLFADKTAEKKDTHRI--QEITGDLAK 512
Score = 58 (25.5 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 28/121 (23%), Positives = 52/121 (42%)
Query: 42 TLTLSSIITPRLARRGGLD---EPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGREF-GT 97
TL LS + P D E F+ +++ F + ++V ++ + N + F G+
Sbjct: 220 TLQLSGVRAPSTRNPNAADSRAEAFSEEAKFFAESRLLQRDVQIILE-STSN--QNFVGS 276
Query: 98 VILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAE 157
++ N+A ++ EG+AK + G + +L E QAK + L W +
Sbjct: 277 IVHPKGNIAESLLREGYAKCVDWSI--GLCTGGAQKLRDAERQAKEKRLRLWKSYQPTSS 334
Query: 158 A 158
A
Sbjct: 335 A 335
Score = 43 (20.2 bits), Expect = 5.5e-23, Sum P(2) = 5.5e-23
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 307 SVFYPDGETAKDLAMELVENGLA 329
+V+Y G D+ L+ GLA
Sbjct: 850 TVYYDSGNKKVDIGKSLIAEGLA 872
>DICTYBASE|DDB_G0279659 [details] [associations]
symbol:snd1 "Staphylococcus nuclease (SNase-like)
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0016788
"hydrolase activity, acting on ester bonds" evidence=IEA]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISS] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS50830
SMART:SM00318 InterPro:IPR002999 dictyBase:DDB_G0279659
GO:GO:0005634 GenomeReviews:CM000152_GR GO:GO:0003676 GO:GO:0016788
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 PROSITE:PS50304
EMBL:AAFI02000032 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
KO:K15979 RefSeq:XP_641583.1 ProteinModelPortal:Q54WH0
EnsemblProtists:DDB0231754 GeneID:8622157 KEGG:ddi:DDB_G0279659
InParanoid:Q54WH0 OMA:RFYVQTV ProtClustDB:CLSZ2497222
Uniprot:Q54WH0
Length = 921
Score = 329 (120.9 bits), Expect = 2.1e-69, Sum P(3) = 2.1e-69
Identities = 90/255 (35%), Positives = 134/255 (52%)
Query: 526 AVAQSNAAGQP-----AGV-NVAELVVSRGLGNVINHRDFEERSNYYDXXXXXXXXXXXX 579
A+A SN +P G NV+ +V GL + H+ + R+ Y+
Sbjct: 432 AIASSNLPEKPYYSVFLGKGNVSLGLVEAGLARLTEHKGADNRAIDYEALITAENKAKKK 491
Query: 580 XXXCYSSKEP-PVMHIQDLTMAP--VK-KARDFLPFLQRSRRIPAVVEYVLSGHRFKVLI 635
YS+K+ P ++ D++ +K KA+ LP + R +PAVV+YV S R K+ I
Sbjct: 492 HSGLYSNKDSAPSFNVNDVSSEDKNLKAKAQKLLPHI-RGIVLPAVVDYVFSAQRVKLFI 550
Query: 636 PKETCSIAFSFSGVRCPGR--NERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLW 693
KE+C I F+ SGVR P R NE SN+AL R+ + Q DV I++E +D+ G F+G+L
Sbjct: 551 EKESCMINFTMSGVRAPRRDENEELSNQALGFSREHLHQHDVHIQIEDIDKGGNFIGTLM 610
Query: 694 ESRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEE--VS 751
N A+ L+E G A + +R+ D E AE AKS +L +W+NY EE V+
Sbjct: 611 VGNKNFALSLVEMGFASIYDPM--NRLNDYQRFEDAENKAKSSRLNLWKNYDPEEEQRVA 668
Query: 752 NG-AAVEGKQKEVLK 765
N AA E ++K+ K
Sbjct: 669 NQKAAAEEERKQQQK 683
Score = 267 (99.0 bits), Expect = 2.1e-69, Sum P(3) = 2.1e-69
Identities = 77/212 (36%), Positives = 109/212 (51%)
Query: 16 VKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDEP------FAWDSRE 69
V+AV SGDSLVI L + P E +LS + PRL G D+P FAW+SRE
Sbjct: 23 VRAVNSGDSLVIQDLKTAD-SPKVE--YSLSHLTVPRLGYHGSNDKPPTKDLPFAWESRE 79
Query: 70 FLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD---KNVAMLVVSEGWAKVKEQGSQKGE 126
FLR CIGK+V F DY P G++F +V L D ++ ++ EGWA + + K
Sbjct: 80 FLRSKCIGKKVQFFTDYTAPT-GKKFISVYLYDDLENSLNKQMIEEGWASLYRSTTGKEN 138
Query: 127 ASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGR 186
P L++LE +A + LG +K P A SIR P I FN + KG+
Sbjct: 139 KKPEYLNLIQLESEAISKELGIHNKNPIAITNSIR--PIHTINSFDLFNKL------KGK 190
Query: 187 PMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+ +VEQ R+ ++ RV + P F + ++G
Sbjct: 191 QLTAVVEQVRNAASYRVTITPSFHTFLIQLSG 222
Score = 240 (89.5 bits), Expect = 2.1e-69, Sum P(3) = 2.1e-69
Identities = 66/201 (32%), Positives = 107/201 (53%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFAL+A+ F +L+R+V++ L+ DK NL G++ D +D+A EL++NGL Y
Sbjct: 239 EPFALEAESFISKNLLHRDVQLTLDTFDKQGNLFGTIKCAD----RDVACELLKNGLGTY 294
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGK---VVEVV 388
+ WS + LK A+ AK +R+W Y P S+S + + + + +
Sbjct: 295 VPWSGATRSAPDQMLLKQAEETAKGQGIRVW--YQSPSSSSTSSSSSSSSSSNEPYPKEI 352
Query: 389 SGDCIIVADDS---IPYGNALAERRVNLSSIRCPKIGNP-RKDEKPAA----YAREAREF 440
G I + ++ I N E +V L+SIR P P K++K + YA EA+E+
Sbjct: 353 DGKVIDIGNNGTVGILSENDRKEYKVTLASIRVPNFTKPSEKEDKDSKFERYYAYEAKEW 412
Query: 441 LRTRLIGRQVNVQMEYSRKVV 461
LR RLIG++V ++E+ R +
Sbjct: 413 LRKRLIGQKVIAKLEFIRPAI 433
Score = 177 (67.4 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 50/180 (27%), Positives = 88/180 (48%)
Query: 598 TMAPVKKARDFLPFLQ-RSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPG--- 653
++ P+ F F + + +++ AVVE V + ++V I + SGV+CPG
Sbjct: 171 SIRPIHTINSFDLFNKLKGKQLTAVVEQVRNAASYRVTITPSFHTFLIQLSGVQCPGYKK 230
Query: 654 --RN----ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAG 707
N E ++ EA + + +L RDV++ ++T D+ G G++ + +VA LL+ G
Sbjct: 231 DNNNQMQPEPFALEAESFISKNLLHRDVQLTLDTFDKQGNLFGTIKCADRDVACELLKNG 290
Query: 708 LAKLQTSFGSDR-IPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKK 766
L G+ R PD LL+QAE++AK Q +++W S+ ++ E K
Sbjct: 291 LGTYVPWSGATRSAPDQMLLKQAEETAKGQGIRVWYQSPSSSSTSSSSSSSSSSNEPYPK 350
Score = 118 (46.6 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 48/215 (22%), Positives = 100/215 (46%)
Query: 17 KAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLAR---RGGLDEPF----AWDSRE 69
K + G++ + LS + +E +TL+SI P + + D F A++++E
Sbjct: 355 KVIDIGNNGTVGILSENDR---KEYKVTLASIRVPNFTKPSEKEDKDSKFERYYAYEAKE 411
Query: 70 FLRKLCIGKEVTFRVDYAVPNIG------REFGTVILGDKNVAMLVVSEGWAKVKEQGSQ 123
+LRK IG++V ++++ P I + + +V LG NV++ +V G A++ E
Sbjct: 412 WLRKRLIGQKVIAKLEFIRPAIASSNLPEKPYYSVFLGKGNVSLGLVEAGLARLTEHKGA 471
Query: 124 KGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDAN 183
A + A L+ E +AK + G +S A ++ ++ S+ + A LL
Sbjct: 472 DNRAIDYEA-LITAENKAKKKHSGLYSNKDSAPSFNVNDV--SSEDKNLKAKAQKLLPHI 528
Query: 184 KGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+G + +V+ +++++ E + ++G
Sbjct: 529 RGIVLPAVVDYVFSAQRVKLFIEKESCMINFTMSG 563
Score = 107 (42.7 bits), Expect = 7.1e-28, Sum P(3) = 7.1e-28
Identities = 32/112 (28%), Positives = 57/112 (50%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
+E + A F+ + +V I +E +DK N IG++ + K+ A+ LVE G A
Sbjct: 572 NEELSNQALGFSREHLHQHDVHIQIEDIDKGGNFIGTLMVGN----KNFALSLVEMGFAS 627
Query: 331 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQ----SNSKAIHDQ 378
+ N + + +R + A+ +AK +RL +W NY P + +N KA ++
Sbjct: 628 IYD-PMNRLND--YQRFEDAENKAKSSRLNLWKNYDPEEEQRVANQKAAAEE 676
Score = 101 (40.6 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 61 EPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGDKNVAMLVVSEGWAK-VKE 119
EPFA ++ F+ K + ++V +D G FGT+ D++VA ++ G V
Sbjct: 239 EPFALEAESFISKNLLHRDVQLTLD-TFDKQGNLFGTIKCADRDVACELLKNGLGTYVPW 297
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEAS 159
G+ + L L + EE AK QG+ W + P ++ S
Sbjct: 298 SGATRSAPDQML--LKQAEETAKGQGIRVWYQSPSSSSTS 335
Score = 88 (36.0 bits), Expect = 3.1e-30, Sum P(2) = 3.1e-30
Identities = 30/96 (31%), Positives = 51/96 (53%)
Query: 369 QSN--SKAIHDQNFTGKVVEVV-SGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPR 425
QSN I Q T VV V SGD +++ D + ++ + +LS + P++G
Sbjct: 5 QSNVPQSQIQPQVPTIGVVRAVNSGDSLVIQD--LKTADS-PKVEYSLSHLTVPRLGYHG 61
Query: 426 KDEKPAA----YAREAREFLRTRLIGRQVNVQMEYS 457
++KP +A E+REFLR++ IG++V +Y+
Sbjct: 62 SNDKPPTKDLPFAWESREFLRSKCIGKKVQFFTDYT 97
Score = 80 (33.2 bits), Expect = 2.2e-29, Sum P(2) = 2.2e-29
Identities = 42/197 (21%), Positives = 77/197 (39%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLE-GVDKFKNLIGSVFYPDGETAKDLAMELVENGLA 329
D PFA +++ F + + ++V+ + K I Y D E + L +++E G A
Sbjct: 70 DLPFAWESREFLRSKCIGKKVQFFTDYTAPTGKKFISVYLYDDLENS--LNKQMIEEGWA 127
Query: 330 KYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQS--NS-KAIHDQN----FT- 381
S E L L+++ + + P + NS + IH N F
Sbjct: 128 SLYR-STTGKENKKPEYLNLIQLESEAISKELGIHNKNPIAITNSIRPIHTINSFDLFNK 186
Query: 382 --GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDE-KPAAYAREAR 438
GK + V A + + + LS ++CP ++ +P +A EA
Sbjct: 187 LKGKQLTAVVEQVRNAASYRVTITPSFHTFLIQLSGVQCPGYKKDNNNQMQPEPFALEAE 246
Query: 439 EFLRTRLIGRQVNVQME 455
F+ L+ R V + ++
Sbjct: 247 SFISKNLLHRDVQLTLD 263
Score = 69 (29.3 bits), Expect = 1.1e-41, Sum P(3) = 1.1e-41
Identities = 24/91 (26%), Positives = 46/91 (50%)
Query: 652 PGRNERYSNEALLLMRQKILQRDVEIEVETV-DRTGTFLGSLWESRTNVAVILLEAGLAK 710
P ++ Y N+A+ M ++ L D+++ V + D GT L ++ + L+ GL
Sbjct: 808 PSNDDIY-NDAMDFMEKEFL--DLKVGVNIIRDIDGTQHVLLSDNAGIINGELVRNGLVS 864
Query: 711 LQTSFGSDRIPDSHLLEQAEKSAKSQKLKIW 741
+ S ++P L+ E+ AKS++L +W
Sbjct: 865 VDRS---TKLPSIQQLQDEEQKAKSKRLGVW 892
Score = 69 (29.3 bits), Expect = 6.0e-24, Sum P(3) = 6.0e-24
Identities = 43/194 (22%), Positives = 79/194 (40%)
Query: 274 FALDAKYFTEMRVLNREVRIVLEGVDKF---KNLIGSVFYPDGETAKDLAMELVENGLAK 330
+A +AK + R++ ++V LE + NL +Y ++++ LVE GLA+
Sbjct: 405 YAYEAKEWLRKRLIGQKVIAKLEFIRPAIASSNLPEKPYYSVFLGKGNVSLGLVEAGLAR 464
Query: 331 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQS---NSKAIHDQNFTGKVVEV 387
E L A+ +AKK +++N S N + D+N K ++
Sbjct: 465 LTEHKGADNRAIDYEALITAENKAKKKHSGLYSNKDSAPSFNVNDVSSEDKNLKAKAQKL 524
Query: 388 VSGDCIIVADDSIPYGNALAERRVNLSSIRC------PKIGNPRKDEKPAAYAREAREFL 441
+ IV + Y + ++ + C + PR+DE + +A F
Sbjct: 525 LPHIRGIVLPAVVDYVFSAQRVKLFIEKESCMINFTMSGVRAPRRDENEEL-SNQALGFS 583
Query: 442 RTRLIGRQVNVQME 455
R L V++Q+E
Sbjct: 584 REHLHQHDVHIQIE 597
Score = 53 (23.7 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 277 DAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKYIEWSA 336
DA F E L+ +V GV+ +++ G+ + A + ELV NGL ++ S
Sbjct: 816 DAMDFMEKEFLDLKV-----GVNIIRDIDGTQHVLLSDNAGIINGELVRNGLVS-VDRST 869
Query: 337 NMMEEDAKRRLKAADLQAKKTRLRMW 362
+ + ++L+ + +AK RL +W
Sbjct: 870 KL---PSIQQLQDEEQKAKSKRLGVW 892
>ASPGD|ASPL0000052132 [details] [associations]
symbol:AN0242 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016788 "hydrolase activity, acting
on ester bonds" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR006021 InterPro:IPR016071 InterPro:IPR016685
Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS50830 SMART:SM00318
InterPro:IPR002999 EMBL:BN001308 GO:GO:0003676 GO:GO:0016788
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 Gene3D:2.40.50.90 EMBL:AACD01000005 eggNOG:COG1525
SUPFAM:SSF50199 HOGENOM:HOG000173592 KO:K15979 OMA:IWKDYVA
OrthoDB:EOG473T0D RefSeq:XP_657846.1 ProteinModelPortal:Q5BGT8
EnsemblFungi:CADANIAT00002482 GeneID:2876024 KEGG:ani:AN0242.2
Uniprot:Q5BGT8
Length = 882
Score = 334 (122.6 bits), Expect = 2.8e-65, Sum P(3) = 2.8e-65
Identities = 86/247 (34%), Positives = 134/247 (54%)
Query: 540 NVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDLT 598
NVA +V G +VI HR D +RS YD +SSK P QD +
Sbjct: 409 NVALALVQAGYASVIRHRQDDSDRSPIYDDLMIAEAEAQKDGKGMWSSKPPKTKQYQDYS 468
Query: 599 MAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GRN- 655
+ ++KA+ + LQR +R+PA+V++V SG RF VL+P+E + SG+R P RN
Sbjct: 469 ES-LQKAKMEVSILQRQKRVPAIVDFVKSGSRFTVLVPRENAKLTLVLSGIRAPRSARNP 527
Query: 656 ----ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKL 711
E + NEA L ++ +QRDVEI+VET+D+ G F+G+L+ ++ N LLE GLA +
Sbjct: 528 GEASEPFGNEAHELANRRCMQRDVEIDVETIDKVGGFIGTLYVNKENFTKALLEEGLATV 587
Query: 712 QTSFGSDRIPDSHLLEQ--AEKSAKSQKLKIWENY------VEGEEVSNGAAVEGKQKEV 763
++ +++ H E AE+ AK + +W ++ E EE ++G+AVE +
Sbjct: 588 H-AYSAEQ--SGHATEYFAAEQRAKEARKGLWHDWDPSKELEEEEEATSGSAVETEATTR 644
Query: 764 LKKFWEV 770
K + +V
Sbjct: 645 RKDYRDV 651
Score = 293 (108.2 bits), Expect = 2.8e-65, Sum P(3) = 2.8e-65
Identities = 83/211 (39%), Positives = 123/211 (58%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDEPFAWDSREFLRK 73
ARVK+V SGD++V++ + NP +E+ L+L+ + PRL R G DEP+A+ SREFLR+
Sbjct: 5 ARVKSVLSGDTVVLSHVHNP----AQERVLSLAYVSAPRLRREG--DEPYAFQSREFLRE 58
Query: 74 LCIGKEVTFRVDYAVPNIGREFGTVILGDKNVAM--LVVSEGWAKVKEQ-GSQKGEASPF 130
L +GK V F+ Y+VP+ RE+G + L V + +VV EGW++V+E+ G + ++
Sbjct: 59 LLVGKVVQFQALYSVPSSQREYGKIKLPTFEVTLPEIVVQEGWSRVREEAGKRSDDSEET 118
Query: 131 LA--ELLR-LEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRP 187
LA E LR LE+ A+ +G G W G E D N A +L+D G+
Sbjct: 119 LAMLERLRALEDHARTEGKGVWGSGNGRIETRY---------DLEN--AKSLVDEWSGKH 167
Query: 188 MQGIVEQARDGSTLRVYLL--PEFQFVQVFV 216
++GIVE+ G L V LL PE + +QV V
Sbjct: 168 LEGIVEKVLTGDRLVVRLLVAPE-EHLQVIV 197
Score = 170 (64.9 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 46/119 (38%), Positives = 63/119 (52%)
Query: 39 REKTLTLSSIITPRLARRGGLDEPFAWDSREFLRKLCIGKEVTFRVDYAVPNI-G---RE 94
+EK L+LSSI P+ + PFA D++EFLRK IGK V ++ P G RE
Sbjct: 342 QEKKLSLSSIRQPKPS--DPKQAPFAADAKEFLRKRIIGKHVKVTINGKKPATEGYEERE 399
Query: 95 FGTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVP 153
TVI G+ NVA+ +V G+A V + SP +L+ E +A+ G G WS P
Sbjct: 400 VATVIQGNTNVALALVQAGYASVIRHRQDDSDRSPIYDDLMIAEAEAQKDGKGMWSSKP 458
Score = 168 (64.2 bits), Expect = 2.8e-65, Sum P(3) = 2.8e-65
Identities = 52/166 (31%), Positives = 93/166 (56%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EP+ +A+ F E R+L R+V++ L GV LI +V +P+G ++A L+E GLA+
Sbjct: 220 EPYGEEAQQFVESRILQRKVQVSLLGVTPQGQLIATVLHPNG----NIARYLLEAGLARC 275
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
+ + ++ + + ++ AK RL ++T V P+ + +Q++ VV V++ D
Sbjct: 276 HDHHSPLLGAEMAA-FRRSEKVAKDARLGLFTGLVAPKGPAGGATEQDYV--VVRVLNAD 332
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKP-AAYARE 436
I V + + G E++++LSSIR PK +P+ + P AA A+E
Sbjct: 333 TIFVRNKA---GQ---EKKLSLSSIRQPKPSDPK--QAPFAADAKE 370
Score = 145 (56.1 bits), Expect = 7.1e-63, Sum P(3) = 7.1e-63
Identities = 45/146 (30%), Positives = 80/146 (54%)
Query: 318 DLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHD 377
++A L+E GLA+ + + ++ + + ++ AK RL ++T V P+ + +
Sbjct: 262 NIARYLLEAGLARCHDHHSPLLGAEMAA-FRRSEKVAKDARLGLFTGLVAPKGPAGGATE 320
Query: 378 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREA 437
Q++ VV V++ D I V + + G E++++LSSIR PK +P K A +A +A
Sbjct: 321 QDYV--VVRVLNADTIFVRNKA---GQ---EKKLSLSSIRQPKPSDP----KQAPFAADA 368
Query: 438 REFLRTRLIGRQVNVQMEYSRKVVVE 463
+EFLR R+IG+ V V + +K E
Sbjct: 369 KEFLRKRIIGKHVKVTIN-GKKPATE 393
Score = 125 (49.1 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 42/153 (27%), Positives = 71/153 (46%)
Query: 616 RRIPAVVEYVLSGHRF--KVLI-PKETCSIAFSFSGVRCP--------GRN---ERYSNE 661
+ + +VE VL+G R ++L+ P+E + +GVR P G+ E Y E
Sbjct: 166 KHLEGIVEKVLTGDRLVVRLLVAPEEHLQVIVVVAGVRAPATKRVGADGKEQPAEPYGEE 225
Query: 662 ALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIP 721
A + +ILQR V++ + V G + ++ N+A LLEAGLA+
Sbjct: 226 AQQFVESRILQRKVQVSLLGVTPQGQLIATVLHPNGNIARYLLEAGLARCHDHHSPLLGA 285
Query: 722 DSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGA 754
+ ++EK AK +L ++ V + + GA
Sbjct: 286 EMAAFRRSEKVAKDARLGLFTGLVAPKGPAGGA 318
Score = 124 (48.7 bits), Expect = 0.00063, P = 0.00063
Identities = 37/117 (31%), Positives = 56/117 (47%)
Query: 38 PREK---TLTLSSIITPRLARRGG-LDEPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGR 93
PRE TL LS I PR AR G EPF ++ E + C+ ++V V+ + +G
Sbjct: 505 PRENAKLTLVLSGIRAPRSARNPGEASEPFGNEAHELANRRCMQRDVEIDVE-TIDKVGG 563
Query: 94 EFGTVILGDKNVAMLVVSEGWAKVKEQGS-QKGEASPFLAELLRLEEQAKLQGLGRW 149
GT+ + +N ++ EG A V + Q G A+ + A E++AK G W
Sbjct: 564 FIGTLYVNKENFTKALLEEGLATVHAYSAEQSGHATEYFAA----EQRAKEARKGLW 616
Score = 105 (42.0 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 52/208 (25%), Positives = 90/208 (43%)
Query: 273 PFALDAKYFTEMRVLNREVRIVLEG----VDKFKNL-IGSVFYPDGETAKDLAMELVENG 327
PFA DAK F R++ + V++ + G + ++ + +V G T ++A+ LV+ G
Sbjct: 363 PFAADAKEFLRKRIIGKHVKVTINGKKPATEGYEEREVATVI--QGNT--NVALALVQAG 418
Query: 328 LAKYIEWSANMMEEDA-KRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVE 386
A I + + L A+ +A+K MW++ PP++ + ++ +E
Sbjct: 419 YASVIRHRQDDSDRSPIYDDLMIAEAEAQKDGKGMWSSK-PPKTKQYQDYSESLQKAKME 477
Query: 387 V--------VSGDCIIVADDS-----IPYGNALAERRVNLSSIRCPKIG-NPRKDEKPAA 432
V V V S +P NA + + LS IR P+ NP + +P
Sbjct: 478 VSILQRQKRVPAIVDFVKSGSRFTVLVPRENA--KLTLVLSGIRAPRSARNPGEASEP-- 533
Query: 433 YAREAREFLRTRLIGRQVNVQMEYSRKV 460
+ EA E R + R V + +E KV
Sbjct: 534 FGNEAHELANRRCMQRDVEIDVETIDKV 561
Score = 99 (39.9 bits), Expect = 1.8e-27, Sum P(2) = 1.8e-27
Identities = 30/115 (26%), Positives = 54/115 (46%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPF +A R + R+V I +E +DK IG+++ ++ L+E GLA
Sbjct: 532 EPFGNEAHELANRRCMQRDVEIDVETIDKVGGFIGTLYV----NKENFTKALLEEGLATV 587
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVE 386
+SA + AA+ +AK+ R +W ++ P + + ++ +G VE
Sbjct: 588 HAYSAE--QSGHATEYFAAEQRAKEARKGLWHDWDPSKELEE--EEEATSGSAVE 638
Score = 98 (39.6 bits), Expect = 6.5e-32, Sum P(2) = 6.5e-32
Identities = 47/206 (22%), Positives = 96/206 (46%)
Query: 271 DEPFALDAKYFTEMRVLNREVRI-VLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLA 329
DEP+A ++ F ++ + V+ L V + G + P E L +V+ G +
Sbjct: 45 DEPYAFQSREFLRELLVGKVVQFQALYSVPSSQREYGKIKLPTFEVT--LPEIVVQEGWS 102
Query: 330 KYIEWSANMMEEDAK-----RRLKAADLQAKKTRLRMW--------TNYVPPQSNSKAIH 376
+ E + ++ + RL+A + A+ +W T Y N+K++
Sbjct: 103 RVREEAGKRSDDSEETLAMLERLRALEDHARTEGKGVWGSGNGRIETRY--DLENAKSLV 160
Query: 377 DQNFTGK----VVE-VVSGDCIIVADDSIPYGNALAERRVNLSSIRCP---KIGNPRKDE 428
D+ ++GK +VE V++GD ++V P + + V ++ +R P ++G K++
Sbjct: 161 DE-WSGKHLEGIVEKVLTGDRLVVRLLVAPEEHL--QVIVVVAGVRAPATKRVGADGKEQ 217
Query: 429 KPAAYAREAREFLRTRLIGRQVNVQM 454
Y EA++F+ +R++ R+V V +
Sbjct: 218 PAEPYGEEAQQFVESRILQRKVQVSL 243
Score = 93 (37.8 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 383 KVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREAREFLR 442
+V V+SGD ++++ N ER ++L+ + P++ R+ ++P YA ++REFLR
Sbjct: 6 RVKSVLSGDTVVLSH----VHNPAQERVLSLAYVSAPRLR--REGDEP--YAFQSREFLR 57
Query: 443 TRLIGRQVNVQMEYS 457
L+G+ V Q YS
Sbjct: 58 ELLVGKVVQFQALYS 72
Score = 68 (29.0 bits), Expect = 4.1e-37, Sum P(3) = 4.1e-37
Identities = 33/141 (23%), Positives = 67/141 (47%)
Query: 645 SFSGVRCPGRNER----YSNEALLLMRQKILQRDVEIEVE-----TVDRTGTFLGSLWES 695
S S +R P ++ ++ +A +R++I+ + V++ + T + ++ +
Sbjct: 347 SLSSIRQPKPSDPKQAPFAADAKEFLRKRIIGKHVKVTINGKKPATEGYEEREVATVIQG 406
Query: 696 RTNVAVILLEAGLAKL--QTSFGSDRIP--DSHLLEQAEK--------SAKSQKLKIWEN 743
TNVA+ L++AG A + SDR P D ++ +AE S+K K K +++
Sbjct: 407 NTNVALALVQAGYASVIRHRQDDSDRSPIYDDLMIAEAEAQKDGKGMWSSKPPKTKQYQD 466
Query: 744 YVEG-EEVSNGAAVEGKQKEV 763
Y E ++ ++ +QK V
Sbjct: 467 YSESLQKAKMEVSILQRQKRV 487
>UNIPROTKB|G5EHM8 [details] [associations]
symbol:MGCH7_ch7g348 "Nuclease domain-containing protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR016685 Pfam:PF00565 PIRSF:PIRSF017179 PROSITE:PS50830
SMART:SM00318 InterPro:IPR002999 GO:GO:0003676 GO:GO:0016788
GO:GO:0031047 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 EMBL:CM000230 EMBL:CM001237 Gene3D:2.40.50.90
SUPFAM:SSF50199 KO:K15979 RefSeq:XP_003721166.1
ProteinModelPortal:G5EHM8 EnsemblFungi:MGG_12646T0 GeneID:5050519
KEGG:mgr:MGG_12646 Uniprot:G5EHM8
Length = 894
Score = 306 (112.8 bits), Expect = 2.3e-60, Sum P(3) = 2.3e-60
Identities = 76/243 (31%), Positives = 128/243 (52%)
Query: 518 KGEGD-DASAVAQSNAAGQPAGVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXX 575
+ EGD +A VA AG+ N+ ++V G +VI HR D +R+ YD
Sbjct: 388 EAEGDFEAKEVATVTQAGK----NIGLILVQEGYASVIRHRKDDTDRAPNYDELLAAQEQ 443
Query: 576 XXXXXXXCYSSKEPPVMHIQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLI 635
+S K P + D + + +++A+ L LQR +++PA+V++ SG RF +LI
Sbjct: 444 AKTDGKGMWSGKAPKIKQFTDASES-LQRAKIQLSVLQRQKKVPAIVDFCKSGSRFTILI 502
Query: 636 PKETCSIAFSFSGVRCP---GRN------ERYSNEALLLMRQKILQRDVEIEVETVDRTG 686
P+E+ + G+R P GRN E + EAL L ++ QRDVE++V +D+ G
Sbjct: 503 PRESVKLTLVLGGIRAPRAPGRNPQTDKGEPFGQEALDLANKRCNQRDVEVDVLDLDKVG 562
Query: 687 TFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVE 746
F+G L+ R + A IL+E GLA + + +++ ++ L AEK AK + +W ++
Sbjct: 563 GFIGDLYVGRESFAKILVEEGLASVH-QYSAEKSGNATELNAAEKRAKEARKGMWHDWTP 621
Query: 747 GEE 749
++
Sbjct: 622 SDD 624
Score = 268 (99.4 bits), Expect = 2.3e-60, Sum P(3) = 2.3e-60
Identities = 79/239 (33%), Positives = 119/239 (49%)
Query: 14 ARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDEPFAWDSREFLRK 73
A VK++ SGD+LV+++ +NPN E+T +L+ + PRL + G DE FA+ SREFLR+
Sbjct: 8 AVVKSILSGDTLVLSSPNNPN----LERTFSLAFVSAPRLNKDG--DEAFAFQSREFLRE 61
Query: 74 LCIGKEVTFRVDYAVPNIGREFGTVIL-GDKNVAMLVVSEGWAKVKEQGSQKGEASPFLA 132
CIGK V ++ Y +P GRE+G+ I+ + +V GWAKV+E +K E L
Sbjct: 62 SCIGKPVQCKILYTIPGSGREYGSAIVKAGPELPDALVKAGWAKVREDAGKKEEDEEVLQ 121
Query: 133 --ELLR-LEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQ 189
E+LR LE +A+ G G W+ G E ++N + + KG+ +
Sbjct: 122 RLEVLRQLENEARSDGRGLWAGTGGHIE--VQN----------DLGGPEFMKEWKGKTVD 169
Query: 190 GIVEQARDGSTLRV-YLLPEFQFVQVF--VAGXXXXXXXXXXXXXXDTDTEETNGDVSA 245
G++E+ G L V LL + + QV VAG EE + A
Sbjct: 170 GVIERVLSGDRLLVRLLLSDKKHCQVMTLVAGIRTPATQRAGQNGTTQPAEEYGNEAKA 228
Score = 184 (69.8 bits), Expect = 9.9e-16, Sum P(3) = 9.9e-16
Identities = 52/157 (33%), Positives = 75/157 (47%)
Query: 2 ATPAAAGGGWYRARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDE 61
A AA GG + V + DS+++ + S E+ + SS+ PR A +
Sbjct: 309 AVKAAGEGGSHDMTVAKIIGADSIIVRSKSGA------ERRINFSSVRGPRTAEPS--EA 360
Query: 62 PFAWDSREFLRKLCIGKEVTFRVDYAVPNIG----REFGTVILGDKNVAMLVVSEGWAKV 117
PF +++EFLRK IGK V +D G +E TV KN+ +++V EG+A V
Sbjct: 361 PFREEAKEFLRKKLIGKHVQITIDGKKEAEGDFEAKEVATVTQAGKNIGLILVQEGYASV 420
Query: 118 KEQGSQKGEASPFLAELLRLEEQAKLQGLGRWS-KVP 153
+ +P ELL +EQAK G G WS K P
Sbjct: 421 IRHRKDDTDRAPNYDELLAAQEQAKTDGKGMWSGKAP 457
Score = 177 (67.4 bits), Expect = 2.3e-60, Sum P(3) = 2.3e-60
Identities = 50/153 (32%), Positives = 81/153 (52%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
E + +AK F E R+L R+++I + G +L+ S+ +P G ++A L+E GLA+
Sbjct: 220 EEYGNEAKAFVETRLLQRKIKIDIVGASPQGHLVASLIHPRG----NIAEFLLEEGLARC 275
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++ + M+ E R L+AA+ +A+ RLR+ N + HD V +++ D
Sbjct: 276 NDFHSTMLGEKMAR-LRAAEKKAQDGRLRLHKNRAVKAAGEGGSHDMT----VAKIIGAD 330
Query: 392 CIIVADDSIPYGNALAERRVNLSSIRCPKIGNP 424
IIV S G AERR+N SS+R P+ P
Sbjct: 331 SIIVRSKS---G---AERRINFSSVRGPRTAEP 357
Score = 169 (64.5 bits), Expect = 1.6e-59, Sum P(3) = 1.6e-59
Identities = 48/138 (34%), Positives = 75/138 (54%)
Query: 318 DLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHD 377
++A L+E GLA+ ++ + M+ E R L+AA+ +A+ RLR+ N + HD
Sbjct: 262 NIAEFLLEEGLARCNDFHSTMLGEKMAR-LRAAEKKAQDGRLRLHKNRAVKAAGEGGSHD 320
Query: 378 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREA 437
V +++ D IIV S G AERR+N SS+R P+ P E P + EA
Sbjct: 321 MT----VAKIIGADSIIVRSKS---G---AERRINFSSVRGPRTAEP--SEAP--FREEA 366
Query: 438 REFLRTRLIGRQVNVQME 455
+EFLR +LIG+ V + ++
Sbjct: 367 KEFLRKKLIGKHVQITID 384
Score = 154 (59.3 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 46/145 (31%), Positives = 72/145 (49%)
Query: 614 RSRRIPAVVEYVLSGHRFKV---LIPKETCSIAFSFSGVRCP-----GRN------ERYS 659
+ + + V+E VLSG R V L K+ C + +G+R P G+N E Y
Sbjct: 164 KGKTVDGVIERVLSGDRLLVRLLLSDKKHCQVMTLVAGIRTPATQRAGQNGTTQPAEEYG 223
Query: 660 NEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDR 719
NEA + ++LQR ++I++ G + SL R N+A LLE GLA+ F S
Sbjct: 224 NEAKAFVETRLLQRKIKIDIVGASPQGHLVASLIHPRGNIAEFLLEEGLARCN-DFHSTM 282
Query: 720 IPDSHL-LEQAEKSAKSQKLKIWEN 743
+ + L AEK A+ +L++ +N
Sbjct: 283 LGEKMARLRAAEKKAQDGRLRLHKN 307
Score = 104 (41.7 bits), Expect = 5.9e-25, Sum P(3) = 5.9e-25
Identities = 34/120 (28%), Positives = 55/120 (45%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPF +A R R+V + + +DK IG ++ G + A LVE GLA
Sbjct: 532 EPFGQEALDLANKRCNQRDVEVDVLDLDKVGGFIGDLYV--GR--ESFAKILVEEGLASV 587
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGD 391
++SA + L AA+ +AK+ R MW ++ P + + +Q VE ++ D
Sbjct: 588 HQYSAE--KSGNATELNAAEKRAKEARKGMWHDWTPSDDDEEDAGEQ--AAAAVESINID 643
Score = 88 (36.0 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 378 QNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREA 437
+ F V ++SGD ++++ + P N ER +L+ + P++ N DE A+A ++
Sbjct: 4 KTFIAVVKSILSGDTLVLSSPNNP--NL--ERTFSLAFVSAPRL-NKDGDE---AFAFQS 55
Query: 438 REFLRTRLIGRQVNVQMEYS 457
REFLR IG+ V ++ Y+
Sbjct: 56 REFLRESCIGKPVQCKILYT 75
Score = 83 (34.3 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 23/55 (41%), Positives = 29/55 (52%)
Query: 313 GETAKD-LAMELVENGLA----KYIEWSANMMEEDAKRRLKAADLQAKKTRLRMW 362
G TAKD L E+V NG A K W + + E + LK + QAK+ RL MW
Sbjct: 831 GSTAKDSLNREIVANGYAMVPRKLKPWERSKVFEATLKSLKEVESQAKQDRLGMW 885
Score = 78 (32.5 bits), Expect = 3.0e-36, Sum P(3) = 3.0e-36
Identities = 27/108 (25%), Positives = 54/108 (50%)
Query: 645 SFSGVRCPGRNER----YSNEALLLMRQKILQRDVEIEVE-TVDRTGTF----LGSLWES 695
+FS VR P E + EA +R+K++ + V+I ++ + G F + ++ ++
Sbjct: 345 NFSSVRGPRTAEPSEAPFREEAKEFLRKKLIGKHVQITIDGKKEAEGDFEAKEVATVTQA 404
Query: 696 RTNVAVILLEAGLAKL--QTSFGSDRIPDSHLLEQAEKSAKSQKLKIW 741
N+ +IL++ G A + +DR P+ L A++ AK+ +W
Sbjct: 405 GKNIGLILVQEGYASVIRHRKDDTDRAPNYDELLAAQEQAKTDGKGMW 452
Score = 76 (31.8 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 45/202 (22%), Positives = 82/202 (40%)
Query: 271 DEPFALDAKYFTEMRVLNREVRI-VLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLA 329
DE FA ++ F + + V+ +L + GS G D LV+ G A
Sbjct: 48 DEAFAFQSREFLRESCIGKPVQCKILYTIPGSGREYGSAIVKAGPELPDA---LVKAGWA 104
Query: 330 KYIEWSANMMEEDAK--RRLKAA---DLQAKKTRLRMWTN---YVPPQSN------SKAI 375
K E A EED + +RL+ + +A+ +W ++ Q++ K
Sbjct: 105 KVRE-DAGKKEEDEEVLQRLEVLRQLENEARSDGRGLWAGTGGHIEVQNDLGGPEFMKEW 163
Query: 376 HDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCP---KIGNPRKDEKPAA 432
+ G + V+SGD ++V + + ++ IR P + G +
Sbjct: 164 KGKTVDGVIERVLSGDRLLVR--LLLSDKKHCQVMTLVAGIRTPATQRAGQNGTTQPAEE 221
Query: 433 YAREAREFLRTRLIGRQVNVQM 454
Y EA+ F+ TRL+ R++ + +
Sbjct: 222 YGNEAKAFVETRLLQRKIKIDI 243
Score = 71 (30.1 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 23/99 (23%), Positives = 43/99 (43%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFK-NLIGSVFYPDGETAKDLAMELVENGLA 329
+ PF +AK F +++ + V+I ++G + + + + K++ + LV+ G A
Sbjct: 359 EAPFREEAKEFLRKKLIGKHVQITIDGKKEAEGDFEAKEVATVTQAGKNIGLILVQEGYA 418
Query: 330 KYIEWSANMMEEDAKR-RLKAADLQAKKTRLRMWTNYVP 367
I + + L AA QAK MW+ P
Sbjct: 419 SVIRHRKDDTDRAPNYDELLAAQEQAKTDGKGMWSGKAP 457
Score = 42 (19.8 bits), Expect = 1.6e-32, Sum P(3) = 1.6e-32
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 726 LEQAEKSAKSQKLKIWE 742
L++ E AK +L +WE
Sbjct: 870 LKEVESQAKQDRLGMWE 886
>POMBASE|SPCC645.08c [details] [associations]
symbol:snd1 "RNA-binding protein Snd1" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=NAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016442 "RNA-induced
silencing complex" evidence=IEA] [GO:0016788 "hydrolase activity,
acting on ester bonds" evidence=IEA] [GO:0031048 "chromatin
silencing by small RNA" evidence=NAS] InterPro:IPR006021
InterPro:IPR016071 InterPro:IPR016685 Pfam:PF00565
PIRSF:PIRSF017179 PROSITE:PS01123 PROSITE:PS01284 PROSITE:PS50830
SMART:SM00318 InterPro:IPR002999 PomBase:SPCC645.08c GO:GO:0005829
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0016788
GO:GO:0031048 GO:GO:0016442 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 Gene3D:2.40.50.90 eggNOG:COG1525 SUPFAM:SSF50199
HOGENOM:HOG000173592 KO:K15979 OMA:IWKDYVA EMBL:AB108422 PIR:T41525
RefSeq:NP_588117.1 ProteinModelPortal:Q9Y7U7 STRING:Q9Y7U7
PRIDE:Q9Y7U7 EnsemblFungi:SPCC645.08c.1 GeneID:2539488
KEGG:spo:SPCC645.08c OrthoDB:EOG473T0D NextBio:20800650
Uniprot:Q9Y7U7
Length = 878
Score = 299 (110.3 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 75/237 (31%), Positives = 122/237 (51%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQD 596
G NVA +VV G VI +R D +RS YD +S K+P +I +
Sbjct: 415 GTNVALMVVKSGYATVIRYRMDSVDRSPIYDFLIEAEKAAQEGRKGMWSGKKPAYENIVN 474
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 654
+ + ++ +R +L LQR+R++ ++E V+SG RF+ PKE C F+ +G+R P R
Sbjct: 475 ASESSLR-SRQYLSSLQRTRKLSVIIENVISGSRFRCFCPKENCYFMFACAGIRTPRTAR 533
Query: 655 NERYSNEAL----LLMRQKILQRDVEIEVETVDRTGTFLGSLWESR-TNVAVILLEAGLA 709
N++ E L + + +LQ D ++E+ +VD G FLG ++ + TN A+ LL GLA
Sbjct: 534 NDQEKGEPFAEESLSLAKSLLQHDAQVEILSVDNNGCFLGDIYVNHDTNFALKLLSQGLA 593
Query: 710 KLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKK 766
Q + S E +AK QK+ +W +YV E+ A+ E + + +K+
Sbjct: 594 WCQGYASQSNVQYSQY-HDTEAAAKEQKVGMWHDYVPPEK--KAASTEKESENTVKE 647
Score = 214 (80.4 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 67/234 (28%), Positives = 115/234 (49%)
Query: 16 VKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDEPFAWDSREFLRKLC 75
+K SGDS I L N EK +L+ + PR R G DEPFA++++EF R+L
Sbjct: 9 IKYAQSGDSFNI--LIKDNAKKITEKQFSLAYVECPRFRREG--DEPFAFEAQEFSRRLV 64
Query: 76 IGKEVTFRVDYAVPNIGREFGTVILGDKNVAMLVVSEGWAKVKEQGSQ-KGEA-SPFLAE 133
+G+ + Y +P RE+G + + ++A ++ EG AK++ + ++ +G + + +
Sbjct: 65 VGRPASVSTLYVIPTSKREYGRIRTSEFDLAESLLREGLAKLRPEATRNEGTSENSYFVS 124
Query: 134 LLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSN-FNAMALLDANKGRPMQGIV 192
L ++ A+ LG W G ++ + + + +N N L A+KG+ + GIV
Sbjct: 125 LEEAQDHAQQYKLGIW----GPSDDVV-------VTEKANPANPAKFLKAHKGKKLNGIV 173
Query: 193 EQARDGSTLRV--YLLP-EFQFVQVFVAGXXXXXXXXXXXXXXDTDTE-ETNGD 242
E R+G +RV +L P + Q V + +AG T +E E GD
Sbjct: 174 ETIRNGDQVRVRLFLSPKQHQLVTISLAGVRCPRSTFTATSPEQTSSEQEPCGD 227
Score = 201 (75.8 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 64/192 (33%), Positives = 102/192 (53%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKN---LIGSVFYPDGETAKDLAMELVENGL 328
EP +AK F R+L R V V+E +D N +G+V +P G ++A L+ +GL
Sbjct: 223 EPCGDEAKQFVVTRLLQRNV--VIELLDLAPNGVSFLGNVLHPAG----NIATFLLSSGL 276
Query: 329 AKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWTNYVP--PQSNSKAIHDQNFTGKVVE 386
+ + + + + + L+ + +AK +RL +W N P NS ++ D ++ V
Sbjct: 277 GRVADNHISALGPETMQSLRTIERKAKISRLGIWKNISVSIPDINSLSLKD--YSAVVSR 334
Query: 387 VVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREAREFLRTRLI 446
V+S D + V D+ G E R+ LSSIR P+ N EK A Y EAREFLR ++I
Sbjct: 335 VISTDTLEVRKDN---G---VECRIQLSSIRHPRPSN----EKEAPYQLEAREFLRKKII 384
Query: 447 GRQVNVQMEYSR 458
G++V V +++ R
Sbjct: 385 GKRVQVSLDFIR 396
Score = 136 (52.9 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 62/212 (29%), Positives = 91/212 (42%)
Query: 12 YRARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDEPFAWDSREFL 71
Y A V V S D+L + + G E + LSSI PR + + P+ ++REFL
Sbjct: 328 YSAVVSRVISTDTLEV----RKDNGV--ECRIQLSSIRHPRPSNEK--EAPYQLEAREFL 379
Query: 72 RKLCIGKEVTFRVDYAVPNIGR----EFGTVILGD-KNVAMLVVSEGWAKVKEQGSQKGE 126
RK IGK V +D+ P TV L D NVA++VV G+A V +
Sbjct: 380 RKKIIGKRVQVSLDFIRPGQNDLPAINNCTVKLSDGTNVALMVVKSGYATVIRYRMDSVD 439
Query: 127 ASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGR 186
SP L+ E+ A+ G WS A E +I N S++ +++ + R
Sbjct: 440 RSPIYDFLIEAEKAAQEGRKGMWSGKKPAYE-NIVNASESSLRSRQYLSSL-----QRTR 493
Query: 187 PMQGIVEQARDGSTLRVYLLPEFQFVQVFVAG 218
+ I+E GS R + E + AG
Sbjct: 494 KLSVIIENVISGSRFRCFCPKENCYFMFACAG 525
Score = 119 (46.9 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 634 LIPKETCSIAFSFSGVRCP-------------GRNERYSNEALLLMRQKILQRDVEIEVE 680
L PK+ + S +GVRCP E +EA + ++LQR+V IE+
Sbjct: 188 LSPKQHQLVTISLAGVRCPRSTFTATSPEQTSSEQEPCGDEAKQFVVTRLLQRNVVIELL 247
Query: 681 TVDRTG-TFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDS-HLLEQAEKSAKSQKL 738
+ G +FLG++ N+A LL +GL ++ + S P++ L E+ AK +L
Sbjct: 248 DLAPNGVSFLGNVLHPAGNIATFLLSSGLGRVADNHISALGPETMQSLRTIERKAKISRL 307
Query: 739 KIWEN 743
IW+N
Sbjct: 308 GIWKN 312
Score = 101 (40.6 bits), Expect = 7.0e-29, Sum P(3) = 7.0e-29
Identities = 54/207 (26%), Positives = 95/207 (45%)
Query: 271 DEPFALDAKYFTEMRVLNREVRI-VLEGVDKFKNLIGSVFYPDGETAK-DLAMELVENGL 328
DEPFA +A+ F+ V+ R + L + K G + T++ DLA L+ GL
Sbjct: 49 DEPFAFEAQEFSRRLVVGRPASVSTLYVIPTSKREYGRI-----RTSEFDLAESLLREGL 103
Query: 329 AKYI-EWSAN--MMEEDAKRRLKAADLQAKKTRLRMW--------TNYVPPQSNSKAI-- 375
AK E + N E L+ A A++ +L +W T P + +K +
Sbjct: 104 AKLRPEATRNEGTSENSYFVSLEEAQDHAQQYKLGIWGPSDDVVVTEKANPANPAKFLKA 163
Query: 376 HDQNFTGKVVEVV-SGDCIIVADDSIPYGNALAERRVNLSSIRCPK----IGNPRK---D 427
H +VE + +GD + V P + L ++L+ +RCP+ +P + +
Sbjct: 164 HKGKKLNGIVETIRNGDQVRVRLFLSPKQHQLVT--ISLAGVRCPRSTFTATSPEQTSSE 221
Query: 428 EKPAAYAREAREFLRTRLIGRQVNVQM 454
++P EA++F+ TRL+ R V +++
Sbjct: 222 QEPCG--DEAKQFVVTRLLQRNVVIEL 246
Score = 88 (36.0 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 34/164 (20%), Positives = 75/164 (45%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
EPFA ++ + +L + ++ + VD +G + Y + +T + A++L+ GLA
Sbjct: 540 EPFAEESLSLAKS-LLQHDAQVEILSVDNNGCFLGDI-YVNHDT--NFALKLLSQGLA-- 593
Query: 332 IEWSANMMEEDAKRRLKAADLQA--KKTRLRMWTNYVPPQSNSKAIHDQNFTGKVVEVVS 389
W + + + D +A K+ ++ MW +YVPP+ + + ++ V E +
Sbjct: 594 --WCQGYASQSNVQYSQYHDTEAAAKEQKVGMWHDYVPPEKKAASTEKES-ENTVKEPIY 650
Query: 390 GDCII--VADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPA 431
D ++ +A+D + + + +G+ +K KP+
Sbjct: 651 LDIVLSDIAEDG-KFSFQIIGTGIQQLETLMSDLGSLKKSFKPS 693
Score = 78 (32.5 bits), Expect = 4.4e-17, Sum P(3) = 4.4e-17
Identities = 40/159 (25%), Positives = 73/159 (45%)
Query: 620 AVVEYVLSGHRFKVLIPKET-CSIAFSFSGVRCPG-RNER---YSNEALLLMRQKILQRD 674
AVV V+S +V C I S +R P NE+ Y EA +R+KI+ +
Sbjct: 330 AVVSRVISTDTLEVRKDNGVECRI--QLSSIRHPRPSNEKEAPYQLEAREFLRKKIIGKR 387
Query: 675 VEIEVETVDRTGTFLGSL------WESRTNVAVILLEAGLAK-LQTSFGS-DRIPDSHLL 726
V++ ++ + L ++ TNVA++++++G A ++ S DR P L
Sbjct: 388 VQVSLDFIRPGQNDLPAINNCTVKLSDGTNVALMVVKSGYATVIRYRMDSVDRSPIYDFL 447
Query: 727 EQAEKSAKSQKLKIWENYVEG-EEVSNGAAVEGKQKEVL 764
+AEK+A+ + +W E + N + + ++ L
Sbjct: 448 IEAEKAAQEGRKGMWSGKKPAYENIVNASESSLRSRQYL 486
Score = 77 (32.2 bits), Expect = 2.1e-26, Sum P(3) = 2.1e-26
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 389 SGDC--IIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAAYAREAREFLRTRLI 446
SGD I++ D++ + E++ +L+ + CP+ R+ ++P A+ EA+EF R ++
Sbjct: 14 SGDSFNILIKDNA----KKITEKQFSLAYVECPRFR--REGDEPFAF--EAQEFSRRLVV 65
Query: 447 GRQVNVQMEY 456
GR +V Y
Sbjct: 66 GRPASVSTLY 75
Score = 77 (32.2 bits), Expect = 7.9e-26, Sum P(2) = 7.9e-26
Identities = 32/146 (21%), Positives = 64/146 (43%)
Query: 16 VKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLA-------RRGGLDEPFAWDSR 68
V+ + +GD + + +P + T++L+ + PR + EP +++
Sbjct: 173 VETIRNGDQVRVRLFLSPKQH--QLVTISLAGVRCPRSTFTATSPEQTSSEQEPCGDEAK 230
Query: 69 EFLRKLCIGKEVTFRVDYAVPNIGREF-GTVILGDKNVAMLVVSEGWAKVKEQGSQKGEA 127
+F+ + + V + PN G F G V+ N+A ++S G +V + +
Sbjct: 231 QFVVTRLLQRNVVIELLDLAPN-GVSFLGNVLHPAGNIATFLLSSGLGRVAD--NHISAL 287
Query: 128 SPFLAELLR-LEEQAKLQGLGRWSKV 152
P + LR +E +AK+ LG W +
Sbjct: 288 GPETMQSLRTIERKAKISRLGIWKNI 313
Score = 49 (22.3 bits), Expect = 1.3e-40, Sum P(3) = 1.3e-40
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 536 PAGVNVAELVVSRGLGNVI-NH 556
PAG N+A ++S GLG V NH
Sbjct: 263 PAG-NIATFLLSSGLGRVADNH 283
Score = 37 (18.1 bits), Expect = 2.3e-39, Sum P(3) = 2.3e-39
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 524 ASAVAQSNAAGQPAGVNVAELVVSRGLG-NVI 554
A++ Q+++ +P G + VV+R L NV+
Sbjct: 212 ATSPEQTSSEQEPCGDEAKQFVVTRLLQRNVV 243
>UNIPROTKB|H7C597 [details] [associations]
symbol:SND1 "Staphylococcal nuclease domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016788 "hydrolase activity, acting on
ester bonds" evidence=IEA] InterPro:IPR006021 InterPro:IPR016071
InterPro:IPR002999 GO:GO:0003676 GO:GO:0016788 Pfam:PF00567
Gene3D:2.40.50.90 SUPFAM:SSF50199 EMBL:AC073934 HGNC:HGNC:30646
ChiTaRS:SND1 EMBL:AC006529 EMBL:AC008039 EMBL:AC009181
ProteinModelPortal:H7C597 Ensembl:ENST00000486037 Bgee:H7C597
Uniprot:H7C597
Length = 231
Score = 259 (96.2 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 59/144 (40%), Positives = 83/144 (57%)
Query: 543 ELVVSRGLGNVINHR-DFEERSNYYDXXXXXXXXXXXXXXXCYSSKEPPVMHIQDLTMAP 601
E +VS+GL VI +R D ++RS++YD +S KE P+ + D++
Sbjct: 1 EALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVADIS-GD 59
Query: 602 VKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GRN---- 655
+KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+ CP RN
Sbjct: 60 TQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIECPRGARNLPGL 119
Query: 656 ----ERYSNEALLLMRQKILQRDV 675
E +S EA L ++ +LQR+V
Sbjct: 120 VQEGEPFSEEATLFTKELVLQREV 143
>POMBASE|SPBC19F8.04c [details] [associations]
symbol:SPBC19F8.04c "nuclease" species:4896
"Schizosaccharomyces pombe" [GO:0004518 "nuclease activity"
evidence=ISM] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISS;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR006021 InterPro:IPR016071 Pfam:PF00565
PROSITE:PS01123 PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318
PomBase:SPBC19F8.04c GO:GO:0016021 GO:GO:0005739 GO:GO:0016020
GO:GO:0046872 EMBL:CU329671 GO:GO:0003676 GO:GO:0004519
GO:GO:0004518 Gene3D:2.40.50.90 eggNOG:COG1525 HOGENOM:HOG000212133
SUPFAM:SSF50199 OrthoDB:EOG4QG0PC PIR:T39827 RefSeq:NP_596346.1
ProteinModelPortal:O60168 EnsemblFungi:SPBC19F8.04c.1
GeneID:2540556 KEGG:spo:SPBC19F8.04c OMA:QTLHIRL NextBio:20801682
Uniprot:O60168
Length = 230
Score = 128 (50.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 29/96 (30%), Positives = 53/96 (55%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSV-FYPDGET--AKDLAMELVENG 327
++P+AL+AK F ++ ++ VRI+ +D++ L+ V +YP KD+ +++ G
Sbjct: 120 EQPYALEAKEFLHNKLYHKSVRIIPLKIDRYARLVAGVQYYPIPHFFWKKDIGPQMIRKG 179
Query: 328 LAKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMWT 363
LA E S + K L A ++ AKK +L +W+
Sbjct: 180 LAVVYEGSDGVFCPTKKECLLALEIVAKKKKLSLWS 215
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 173 NFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLP 207
N+ + ++ K + M G V + DG R Y P
Sbjct: 42 NYLNNSTVENRKYKTMFGYVTRVGDGDNFRFYHTP 76
>TIGR_CMR|GSU_1199 [details] [associations]
symbol:GSU_1199 "nuclease, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0004518 "nuclease activity"
evidence=ISS] [GO:0006308 "DNA catabolic process" evidence=ISS]
InterPro:IPR006021 InterPro:IPR016071 Pfam:PF00565 PROSITE:PS50830
SMART:SM00318 GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0016788 Gene3D:2.40.50.90 SUPFAM:SSF50199 HSSP:P00644
HOGENOM:HOG000017398 RefSeq:NP_952252.1 ProteinModelPortal:Q74DW6
GeneID:2688309 KEGG:gsu:GSU1199 PATRIC:22025168 OMA:AWVYERY
ProtClustDB:CLSK743113 BioCyc:GSUL243231:GH27-1200-MONOMER
Uniprot:Q74DW6
Length = 187
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 39/135 (28%), Positives = 61/135 (45%)
Query: 15 RVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDEPFAWDSREFLRKL 74
RV V GD++VI P P R L I TP ++ +P+ ++ + L L
Sbjct: 42 RVITVKDGDTVVIAPAGGGKPYPCR-----LYGIDTPETPKKRKQGQPYGQEAADELSSL 96
Query: 75 CIGKEVTFRVDYAVPNIGREFGTVILGDKNVAMLVVSEGWAKVKEQGSQKGEASPFLAEL 134
+GKEV + R+ GT+ + NV + +V G+A Q ++ P ++E
Sbjct: 97 VLGKEVKVLLT-GDTTYNRQVGTIEVDGVNVNLEMVRRGYAWAYVQYLRR----PHVSEY 151
Query: 135 LRLEEQAKLQGLGRW 149
EE A+ Q LG W
Sbjct: 152 REAEEDARRQRLGLW 166
>UNIPROTKB|A4RMK0 [details] [associations]
symbol:LCL3 "Probable endonuclease LCL3" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR006021 InterPro:IPR016071 Pfam:PF00565
PROSITE:PS01123 PROSITE:PS01284 PROSITE:PS50830 SMART:SM00318
GO:GO:0016021 GO:GO:0005739 GO:GO:0046872 GO:GO:0003676
GO:GO:0090305 GO:GO:0004519 EMBL:CM001232 Gene3D:2.40.50.90
eggNOG:COG1525 SUPFAM:SSF50199 OrthoDB:EOG4QG0PC
RefSeq:XP_003713685.1 GeneID:2678200 KEGG:mgr:MGG_04702
Uniprot:A4RMK0
Length = 257
Score = 115 (45.5 bits), Expect = 0.00082, P = 0.00082
Identities = 24/91 (26%), Positives = 50/91 (54%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
+PF+ +A F + +L R+VR + D+++ ++G+V+ KD+ +E+++ GLA
Sbjct: 142 QPFSAEALEFLKSYILGRDVRTYIYRRDQYERVVGTVWVRRWLLRKDVGLEMIKRGLATV 201
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMW 362
+ + + +AA+ +AK +L MW
Sbjct: 202 YDAKIGAEFGGLEEKYRAAEAKAKLKKLGMW 232
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 792 720 0.00085 121 3 11 22 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 621 (66 KB)
Total size of DFA: 341 KB (2171 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 55.68u 0.19s 55.87t Elapsed: 00:00:02
Total cpu time: 55.70u 0.19s 55.89t Elapsed: 00:00:02
Start: Thu May 9 22:32:39 2013 End: Thu May 9 22:32:41 2013