BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003834
(792 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q78PY7|SND1_MOUSE Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus
GN=Snd1 PE=1 SV=1
Length = 910
Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust.
Identities = 271/766 (35%), Positives = 399/766 (52%), Gaps = 155/766 (20%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR DEP+
Sbjct: 21 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPW 78
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +E
Sbjct: 79 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLATRRE 137
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
G + +P L EEQAK G WS+ G +IR+L I + +F
Sbjct: 138 -GMRAN--NPEQNRLSECEEQAKASKKGMWSE--GNGSHTIRDLK-YTIENPRHF----- 186
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAGIQAPAVARRPAAIVDTDTEET 239
+D++ +P+ I+E RDGS +R LLP V V ++GI+ P R ET
Sbjct: 187 VDSHHQKPVNAIIEHVRDGSVVRALLLPGHHLVTVMLSGIKCPTFRR-----------ET 235
Query: 240 NGDVSAAEAVAPLNSAQRLAASTASAGQQSTDEPFALDAKYFTEMRVLNREVRIVLEGVD 299
+G T EPFA +AK+FTE R+L R+V+I+LE
Sbjct: 236 DGS--------------------------ETPEPFAAEAKFFTESRLLQRDVQIILESCH 269
Query: 300 KFKNLIGSVFYPDGETAKDLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRL 359
+NL+G++ +P+G ++ L++ G A+ ++WS + A++ L+AA+ AK+ RL
Sbjct: 270 N-QNLLGTILHPNG----NITELLLKEGFARCVDWSIAVYTRGAEK-LRAAERFAKERRL 323
Query: 360 RMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCP 419
R+W +YVPP +N D+ F KV++V++ D I+V +S Y + ++LSSIR P
Sbjct: 324 RIWRDYVPPTANLDQ-KDKQFVAKVMQVLNADAIVVKLNSGDY------KTIHLSSIRPP 376
Query: 420 K-----IGNPRKDEKP---AAYAREAREFLRTRLIGRQVNVQMEYSRKVVVEAAPVAAGA 471
+ I + K +P Y EAREFLR +LIG++VNV ++Y R A+P
Sbjct: 377 RLEGDNIQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIRP----ASP----- 427
Query: 472 KGPAGTKGPAGTKGQAAAKGPAGEESVGATETRIIDFGSIFLLSPIKGEGDDASAVAQSN 531
A PA E AT T
Sbjct: 428 ---------------ATETVPAFSERTCATVT---------------------------- 444
Query: 532 AAGQPAGVNVAELVVSRGLGNVINHR-DFEERSNYYDALLAAEARAKAGKKGCYSSKEPP 590
G+N+AE +VS+GL VI +R D ++RS++YD LLAAEARA KG +S KE P
Sbjct: 445 ----IGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVP 500
Query: 591 VMHIQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVR 650
+ + D++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+
Sbjct: 501 IHRVADIS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIE 559
Query: 651 CP--GRN--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVA 700
CP RN E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++
Sbjct: 560 CPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHMDGANLS 619
Query: 701 VILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVE 746
V+L+E L+K+ F ++R L AE++AK +K K+W +Y E
Sbjct: 620 VLLVEQALSKVH--FTAERSAYYKPLLSAEEAAKQRKEKVWAHYEE 663
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 165/409 (40%), Gaps = 96/409 (23%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN-------PRKDEKPAAYA 434
G V V+SG IIV P G ER++NLS+IR + KD +A
Sbjct: 22 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPWA 79
Query: 435 REAREFLRTRLIGRQVNVQMEYSRKVVVEAAPVAAGAKGPAGTKGPAGTKGQAAAKGPAG 494
AREFLR +LIG++V +E K P G
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE---------------------------------NKTPQG 106
Query: 495 EESVGATETRIIDFGSIFLLSPIKGEGDDASAVAQSNAAGQPAGVNVAELVVSRGLGNVI 554
E +G I+L G D + G N+AE +V+ GL
Sbjct: 107 RE-----------YGMIYL-------GKDTN------------GENIAESLVAEGLAT-- 134
Query: 555 NHRDFEERSNY--YDALLAAEARAKAGKKGCYSSKEPPVMHIQDLTMAPVKKARDFLPFL 612
R R+N + L E +AKA KKG +S I+DL ++ R F+
Sbjct: 135 --RREGMRANNPEQNRLSECEEQAKASKKGMWSEGNGS-HTIRDLKYT-IENPRHFVDS- 189
Query: 613 QRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRN---------ERYSNEAL 663
+ + A++E+V G + L+ + SG++CP E ++ EA
Sbjct: 190 HHQKPVNAIIEHVRDGSVVRALLLPGHHLVTVMLSGIKCPTFRRETDGSETPEPFAAEAK 249
Query: 664 LLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDS 723
++LQRDV+I +E+ LG++ N+ +LL+ G A+ + +
Sbjct: 250 FFTESRLLQRDVQIILESC-HNQNLLGTILHPNGNITELLLKEGFARCVDWSIAVYTRGA 308
Query: 724 HLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKKFWEVEN 772
L AE+ AK ++L+IW +Y V A ++ K K+ + K +V N
Sbjct: 309 EKLRAAERFAKERRLRIWRDY-----VPPTANLDQKDKQFVAKVMQVLN 352
>sp|Q66X93|SND1_RAT Staphylococcal nuclease domain-containing protein 1 OS=Rattus
norvegicus GN=Snd1 PE=2 SV=1
Length = 909
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 269/766 (35%), Positives = 400/766 (52%), Gaps = 155/766 (20%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR DEP+
Sbjct: 20 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPW 77
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +E
Sbjct: 78 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLASRRE 136
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
G + +P L EEQAK G WS+ G +IR+L I + +F
Sbjct: 137 -GMRAN--NPEQNRLSECEEQAKASKKGMWSE--GNGSHTIRDLK-YTIENPRHF----- 185
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAGIQAPAVARRPAAIVDTDTEET 239
+D++ +P+ I+E RDGS +R LLP+ V V ++GI+ P R ET
Sbjct: 186 VDSHHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSGIKCPTFRR-----------ET 234
Query: 240 NGDVSAAEAVAPLNSAQRLAASTASAGQQSTDEPFALDAKYFTEMRVLNREVRIVLEGVD 299
+G T EPFA +AK+FTE R+L R+V+I+LE
Sbjct: 235 DGS--------------------------ETPEPFAAEAKFFTESRLLQRDVQIILESCH 268
Query: 300 KFKNLIGSVFYPDGETAKDLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRL 359
+N++G++ +P+G ++ L++ G A+ ++WS + A++ L+AA+ AK+ RL
Sbjct: 269 N-QNILGTILHPNG----NITELLLKEGFARCVDWSIAVYTRGAEK-LRAAERFAKERRL 322
Query: 360 RMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCP 419
R+W +YVPP +N D+ F KV++V++ D I+V +S Y + ++LSSIR P
Sbjct: 323 RIWRDYVPPTANLDQ-KDKQFVAKVMQVLNADAIVVKLNSGDY------KTIHLSSIRPP 375
Query: 420 K-----IGNPRKDEKP---AAYAREAREFLRTRLIGRQVNVQMEYSRKVVVEAAPVAAGA 471
+ I + K +P Y EAREFLR +LIG++V+V ++Y R A+P
Sbjct: 376 RLEGDNIQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVSVTVDYIRP----ASP----- 426
Query: 472 KGPAGTKGPAGTKGQAAAKGPAGEESVGATETRIIDFGSIFLLSPIKGEGDDASAVAQSN 531
A PA E AT T
Sbjct: 427 ---------------ATETVPAFSERTCATVT---------------------------- 443
Query: 532 AAGQPAGVNVAELVVSRGLGNVINHR-DFEERSNYYDALLAAEARAKAGKKGCYSSKEPP 590
G+N+AE +VS+GL VI +R D ++RS++YD LLAAEARA KG +S KE P
Sbjct: 444 ----IGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVP 499
Query: 591 VMHIQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVR 650
+ + D++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+
Sbjct: 500 IHRVADIS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIE 558
Query: 651 CP--GRN--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVA 700
CP RN E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++
Sbjct: 559 CPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHMDGANLS 618
Query: 701 VILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVE 746
V+L+E L+K+ F ++R L AE++AK +K K+W +Y E
Sbjct: 619 VLLVEHALSKVH--FTAERSAYYKPLLSAEEAAKQRKEKVWAHYEE 662
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 167/409 (40%), Gaps = 96/409 (23%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGN-------PRKDEKPAAYA 434
G V V+SG IIV P G ER++NLS+IR + KD +A
Sbjct: 21 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDGKDTPDEPWA 78
Query: 435 REAREFLRTRLIGRQVNVQMEYSRKVVVEAAPVAAGAKGPAGTKGPAGTKGQAAAKGPAG 494
AREFLR +LIG++V +E K P G
Sbjct: 79 FPAREFLRKKLIGKEVCFTIE---------------------------------NKTPQG 105
Query: 495 EESVGATETRIIDFGSIFLLSPIKGEGDDASAVAQSNAAGQPAGVNVAELVVSRGLGNVI 554
E +G I+L G D + G N+AE +V+ GL +
Sbjct: 106 RE-----------YGMIYL-------GKDTN------------GENIAESLVAEGLAS-- 133
Query: 555 NHRDFEERSNY--YDALLAAEARAKAGKKGCYSSKEPPVMHIQDLTMAPVKKARDFLPFL 612
R R+N + L E +AKA KKG +S I+DL ++ R F+
Sbjct: 134 --RREGMRANNPEQNRLSECEEQAKASKKGMWSEGNGS-HTIRDLKYT-IENPRHFVDS- 188
Query: 613 QRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRN---------ERYSNEAL 663
+ + A++E+V G + L+ + + SG++CP E ++ EA
Sbjct: 189 HHQKPVNAIIEHVRDGSVVRALLLPDHYLVTVMLSGIKCPTFRRETDGSETPEPFAAEAK 248
Query: 664 LLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDS 723
++LQRDV+I +E+ LG++ N+ +LL+ G A+ + +
Sbjct: 249 FFTESRLLQRDVQIILESC-HNQNILGTILHPNGNITELLLKEGFARCVDWSIAVYTRGA 307
Query: 724 HLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKKFWEVEN 772
L AE+ AK ++L+IW +Y V A ++ K K+ + K +V N
Sbjct: 308 EKLRAAERFAKERRLRIWRDY-----VPPTANLDQKDKQFVAKVMQVLN 351
>sp|Q863B3|SND1_BOVIN Staphylococcal nuclease domain-containing protein 1 OS=Bos taurus
GN=SND1 PE=1 SV=1
Length = 910
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 266/766 (34%), Positives = 396/766 (51%), Gaps = 155/766 (20%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR + DEP+
Sbjct: 21 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAVAQPDAKDTPDEPW 78
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +E
Sbjct: 79 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLATRRE 137
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
LAE EEQAK G WS+ G +IR+L I + +F
Sbjct: 138 GMRANNPEQNRLAEC---EEQAKASKKGMWSE--GNGSHTIRDLK-YTIENPRHF----- 186
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAGIQAPAVARRPAAIVDTDTEET 239
+D++ +P+ I+E RDGS +R LLP++ V V ++GI+ P R E
Sbjct: 187 VDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRR-----------EA 235
Query: 240 NGDVSAAEAVAPLNSAQRLAASTASAGQQSTDEPFALDAKYFTEMRVLNREVRIVLEGVD 299
+G T EPFA +AK+FTE R+L R+V+I+LE
Sbjct: 236 DG--------------------------SETPEPFAAEAKFFTESRLLQRDVQIILESCH 269
Query: 300 KFKNLIGSVFYPDGETAKDLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRL 359
+N++G++ +P+G ++ L++ G A+ ++WS + A++ L+AA+ AK+ RL
Sbjct: 270 N-QNILGTILHPNG----NITELLLKEGFARCVDWSIAVYTRGAEK-LRAAERFAKERRL 323
Query: 360 RMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCP 419
R+W +YV P +N D+ F KV++V++ D I+V +S Y + ++LSSIR P
Sbjct: 324 RIWRDYVAPTANLDQ-KDKQFVAKVMQVLNADAIVVKLNSGDY------KTIHLSSIRPP 376
Query: 420 KIGNPRKDEK--------PAAYAREAREFLRTRLIGRQVNVQMEYSRKVVVEAAPVAAGA 471
++ +K Y EAREFLR +LIG++VNV ++Y R A+P
Sbjct: 377 RLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIRP----ASP----- 427
Query: 472 KGPAGTKGPAGTKGQAAAKGPAGEESVGATETRIIDFGSIFLLSPIKGEGDDASAVAQSN 531
A PA E AT T
Sbjct: 428 ---------------ATDTVPAFSERTCATVT---------------------------- 444
Query: 532 AAGQPAGVNVAELVVSRGLGNVINHR-DFEERSNYYDALLAAEARAKAGKKGCYSSKEPP 590
G+N+AE +VS+GL VI +R D ++RS++YD LLAAEARA KG +S KE P
Sbjct: 445 ----IGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVP 500
Query: 591 VMHIQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVR 650
+ + D++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+
Sbjct: 501 IHRVADIS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIE 559
Query: 651 CP--GRN--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVA 700
CP RN E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++
Sbjct: 560 CPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHIDGANLS 619
Query: 701 VILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVE 746
V+L+E L+K+ F ++R L AE++AK +K K+W +Y E
Sbjct: 620 VLLVEHALSKVH--FTAERSAYYKSLLSAEEAAKQKKEKVWAHYEE 663
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 168/409 (41%), Gaps = 96/409 (23%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRC------PKIGNPR-KDEKPAAYA 434
G V V+SG IIV P G ER++NLS+IR + P KD +A
Sbjct: 22 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAVAQPDAKDTPDEPWA 79
Query: 435 REAREFLRTRLIGRQVNVQMEYSRKVVVEAAPVAAGAKGPAGTKGPAGTKGQAAAKGPAG 494
AREFLR +LIG++V +E K P G
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE---------------------------------NKTPQG 106
Query: 495 EESVGATETRIIDFGSIFLLSPIKGEGDDASAVAQSNAAGQPAGVNVAELVVSRGLGNVI 554
E +G I+L G D + G N+AE +V+ GL
Sbjct: 107 RE-----------YGMIYL-------GKDTN------------GENIAESLVAEGLAT-- 134
Query: 555 NHRDFEERSNY--YDALLAAEARAKAGKKGCYSSKEPPVMHIQDLTMAPVKKARDFLPFL 612
R R+N + L E +AKA KKG +S I+DL ++ R F+
Sbjct: 135 --RREGMRANNPEQNRLAECEEQAKASKKGMWSEGNGS-HTIRDLKYT-IENPRHFVDS- 189
Query: 613 QRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRN---------ERYSNEAL 663
+ + A++E+V G + L+ + + SG++CP E ++ EA
Sbjct: 190 HHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSETPEPFAAEAK 249
Query: 664 LLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDS 723
++LQRDV+I +E+ LG++ N+ +LL+ G A+ + +
Sbjct: 250 FFTESRLLQRDVQIILESC-HNQNILGTILHPNGNITELLLKEGFARCVDWSIAVYTRGA 308
Query: 724 HLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKKFWEVEN 772
L AE+ AK ++L+IW +Y V+ A ++ K K+ + K +V N
Sbjct: 309 EKLRAAERFAKERRLRIWRDY-----VAPTANLDQKDKQFVAKVMQVLN 352
>sp|Q5REU4|SND1_PONAB Staphylococcal nuclease domain-containing protein 1 OS=Pongo abelii
GN=SND1 PE=2 SV=1
Length = 910
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 266/766 (34%), Positives = 397/766 (51%), Gaps = 155/766 (20%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR DEP+
Sbjct: 21 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEPW 78
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +E
Sbjct: 79 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLATRRE 137
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
G + +P L EEQAK G WS+ G +IR+L I + +F
Sbjct: 138 -GMRAN--NPEQNRLSECEEQAKAAKKGMWSE--GNGSHTIRDLK-YTIENPRHF----- 186
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAGIQAPAVARRPAAIVDTDTEET 239
+D++ +P+ I+E RDGS +R LLP++ V V ++GI+ P R E
Sbjct: 187 VDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRR-----------EA 235
Query: 240 NGDVSAAEAVAPLNSAQRLAASTASAGQQSTDEPFALDAKYFTEMRVLNREVRIVLEGVD 299
+G T EPFA +AK+FTE R+L R+V+I+LE
Sbjct: 236 DG--------------------------SETPEPFAAEAKFFTESRLLQRDVQIILESCH 269
Query: 300 KFKNLIGSVFYPDGETAKDLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRL 359
+N++G++ +P+G ++ L++ G A+ ++WS + A++ L+AA+ AK+ RL
Sbjct: 270 N-QNILGTILHPNG----NITELLLKEGFARCVDWSIAVYTRGAEK-LRAAERFAKERRL 323
Query: 360 RMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCP 419
R+W +YV P +N D+ F KV++V++ D I+V +S Y + ++LSSIR P
Sbjct: 324 RIWRDYVAPTANLDQ-KDKQFVAKVMQVLNADAIVVKLNSGDY------KTIHLSSIRPP 376
Query: 420 KIGNPRKDEK--------PAAYAREAREFLRTRLIGRQVNVQMEYSRKVVVEAAPVAAGA 471
++ +K Y EAREFLR +LIG++VNV ++Y R A+P
Sbjct: 377 RLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIRP----ASP----- 427
Query: 472 KGPAGTKGPAGTKGQAAAKGPAGEESVGATETRIIDFGSIFLLSPIKGEGDDASAVAQSN 531
A PA E AT T
Sbjct: 428 ---------------ATETVPAFSERTCATVT---------------------------- 444
Query: 532 AAGQPAGVNVAELVVSRGLGNVINHR-DFEERSNYYDALLAAEARAKAGKKGCYSSKEPP 590
G+N+AE +VS+GL VI +R D ++RS++YD LLAAEARA KG +S KE P
Sbjct: 445 ----IGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVP 500
Query: 591 VMHIQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVR 650
+ + D++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+
Sbjct: 501 IHRVADIS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIE 559
Query: 651 CP--GRN--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVA 700
CP RN E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++
Sbjct: 560 CPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHIDGANLS 619
Query: 701 VILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVE 746
V+L+E L+K+ F ++R L AE++AK +K K+W +Y E
Sbjct: 620 VLLVEHALSKVH--FTAERSSYYKSLLSAEEAAKQKKEKVWAHYEE 663
Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 168/409 (41%), Gaps = 96/409 (23%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAA-------YA 434
G V V+SG IIV P G ER++NLS+IR + +P A +A
Sbjct: 22 GIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEPWA 79
Query: 435 REAREFLRTRLIGRQVNVQMEYSRKVVVEAAPVAAGAKGPAGTKGPAGTKGQAAAKGPAG 494
AREFLR +LIG++V +E K P G
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE---------------------------------NKTPQG 106
Query: 495 EESVGATETRIIDFGSIFLLSPIKGEGDDASAVAQSNAAGQPAGVNVAELVVSRGLGNVI 554
E +G I+L G D + G N+AE +V+ GL
Sbjct: 107 RE-----------YGMIYL-------GKDTN------------GENIAESLVAEGLAT-- 134
Query: 555 NHRDFEERSNY--YDALLAAEARAKAGKKGCYSSKEPPVMHIQDLTMAPVKKARDFLPFL 612
R R+N + L E +AKA KKG +S I+DL ++ R F+
Sbjct: 135 --RREGMRANNPEQNRLSECEEQAKAAKKGMWSEGNGS-HTIRDLKYT-IENPRHFVDS- 189
Query: 613 QRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRN---------ERYSNEAL 663
+ + A++E+V G + L+ + + SG++CP E ++ EA
Sbjct: 190 HHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSETPEPFAAEAK 249
Query: 664 LLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDS 723
++LQRDV+I +E+ LG++ N+ +LL+ G A+ + +
Sbjct: 250 FFTESRLLQRDVQIILESC-HNQNILGTILHPNGNITELLLKEGFARCVDWSIAVYTRGA 308
Query: 724 HLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKKFWEVEN 772
L AE+ AK ++L+IW +Y V+ A ++ K K+ + K +V N
Sbjct: 309 EKLRAAERFAKERRLRIWRDY-----VAPTANLDQKDKQFVAKVMQVLN 352
>sp|Q7KZF4|SND1_HUMAN Staphylococcal nuclease domain-containing protein 1 OS=Homo sapiens
GN=SND1 PE=1 SV=1
Length = 910
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 265/766 (34%), Positives = 398/766 (51%), Gaps = 155/766 (20%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGL---------DEPF 63
R +K V SG ++++ P GPP E+ + LS+I LARR DEP+
Sbjct: 21 RGIIKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEPW 78
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REFLRK IGKEV F ++ P GRE+G + LG +N+A +V+EG A +E
Sbjct: 79 AFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVAEGLATRRE 137
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
G + +P L EEQAK G WS+ G +IR+L + I + +F
Sbjct: 138 -GMRAN--NPEQNRLSECEEQAKAAKKGMWSE--GNGSHTIRDLKYT-IENPRHF----- 186
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAGIQAPAVARRPAAIVDTDTEET 239
+D++ +P+ I+E RDGS +R LLP++ V V ++GI+ P R E
Sbjct: 187 VDSHHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRR-----------EA 235
Query: 240 NGDVSAAEAVAPLNSAQRLAASTASAGQQSTDEPFALDAKYFTEMRVLNREVRIVLEGVD 299
+G T EPFA +AK+FTE R+L R+V+I+LE
Sbjct: 236 DG--------------------------SETPEPFAAEAKFFTESRLLQRDVQIILESCH 269
Query: 300 KFKNLIGSVFYPDGETAKDLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRL 359
+N++G++ +P+G ++ L++ G A+ ++WS + A++ L+AA+ AK+ RL
Sbjct: 270 N-QNILGTILHPNG----NITELLLKEGFARCVDWSIAVYTRGAEK-LRAAERFAKERRL 323
Query: 360 RMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCP 419
R+W +YV P +N D+ F KV++V++ D I+V +S Y + ++LSSIR P
Sbjct: 324 RIWRDYVAPTANLDQ-KDKQFVAKVMQVLNADAIVVKLNSGDY------KTIHLSSIRPP 376
Query: 420 KIGNPRKDEK--------PAAYAREAREFLRTRLIGRQVNVQMEYSRKVVVEAAPVAAGA 471
++ +K Y EAREFLR +LIG++VNV ++Y R A+P
Sbjct: 377 RLEGENTQDKNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIRP----ASP----- 427
Query: 472 KGPAGTKGPAGTKGQAAAKGPAGEESVGATETRIIDFGSIFLLSPIKGEGDDASAVAQSN 531
A PA E AT T
Sbjct: 428 ---------------ATETVPAFSERTCATVT---------------------------- 444
Query: 532 AAGQPAGVNVAELVVSRGLGNVINHR-DFEERSNYYDALLAAEARAKAGKKGCYSSKEPP 590
G+N+AE +VS+GL VI +R D ++RS++YD LLAAEARA KG +S KE P
Sbjct: 445 ----IGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVP 500
Query: 591 VMHIQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVR 650
+ + D++ +KA+ FLPFLQR+ R AVVEYV SG R K+ +PKETC I F +G+
Sbjct: 501 IHRVADIS-GDTQKAKQFLPFLQRAGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGIE 559
Query: 651 CP--GRN--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVA 700
CP RN E +S EA L ++ +LQR+VE+EVE++D+ G F+G L N++
Sbjct: 560 CPRGARNLPGLVQEGEPFSEEATLFTKELVLQREVEVEVESMDKAGNFIGWLHIDGANLS 619
Query: 701 VILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVE 746
V+L+E L+K+ F ++R L AE++AK +K K+W +Y E
Sbjct: 620 VLLVEHALSKVH--FTAERSSYYKSLLSAEEAAKQKKEKVWAHYEE 663
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 168/409 (41%), Gaps = 96/409 (23%)
Query: 382 GKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKIGNPRKDEKPAA-------YA 434
G + V+SG IIV P G ER++NLS+IR + +P A +A
Sbjct: 22 GIIKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEPWA 79
Query: 435 REAREFLRTRLIGRQVNVQMEYSRKVVVEAAPVAAGAKGPAGTKGPAGTKGQAAAKGPAG 494
AREFLR +LIG++V +E K P G
Sbjct: 80 FPAREFLRKKLIGKEVCFTIE---------------------------------NKTPQG 106
Query: 495 EESVGATETRIIDFGSIFLLSPIKGEGDDASAVAQSNAAGQPAGVNVAELVVSRGLGNVI 554
E +G I+L G D + G N+AE +V+ GL
Sbjct: 107 RE-----------YGMIYL-------GKDTN------------GENIAESLVAEGLAT-- 134
Query: 555 NHRDFEERSNY--YDALLAAEARAKAGKKGCYSSKEPPVMHIQDLTMAPVKKARDFLPFL 612
R R+N + L E +AKA KKG +S I+DL ++ R F+
Sbjct: 135 --RREGMRANNPEQNRLSECEEQAKAAKKGMWSEGNGS-HTIRDLKYT-IENPRHFVDS- 189
Query: 613 QRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRN---------ERYSNEAL 663
+ + A++E+V G + L+ + + SG++CP E ++ EA
Sbjct: 190 HHQKPVNAIIEHVRDGSVVRALLLPDYYLVTVMLSGIKCPTFRREADGSETPEPFAAEAK 249
Query: 664 LLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDS 723
++LQRDV+I +E+ LG++ N+ +LL+ G A+ + +
Sbjct: 250 FFTESRLLQRDVQIILESC-HNQNILGTILHPNGNITELLLKEGFARCVDWSIAVYTRGA 308
Query: 724 HLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKKFWEVEN 772
L AE+ AK ++L+IW +Y V+ A ++ K K+ + K +V N
Sbjct: 309 EKLRAAERFAKERRLRIWRDY-----VAPTANLDQKDKQFVAKVMQVLN 352
>sp|Q7ZT42|SND1_DANRE Staphylococcal nuclease domain-containing protein 1 OS=Danio rerio
GN=snd1 PE=2 SV=1
Length = 897
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 270/782 (34%), Positives = 402/782 (51%), Gaps = 154/782 (19%)
Query: 13 RARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRG---------GLDEPF 63
R VK V SG ++++ P GPP E+ + LS+I LARR DEP+
Sbjct: 21 RGIVKMVLSGCAIIVRG--QPRGGPPPERQINLSNIRAGALARRAIQGQPDTKDTPDEPW 78
Query: 64 AWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGD----KNVAMLVVSEGWAKVKE 119
A+ +REF+RK IGKEV F V+ P GRE+G V LG +N+A +V+EG A V+
Sbjct: 79 AFQAREFMRKKVIGKEVCFTVENKTPQ-GREYGMVYLGKDTSGENIAESLVAEGLAMVRR 137
Query: 120 QGSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMAL 179
+G + +P L LE+QAK G WS+ G +IR+L + I + NF
Sbjct: 138 EGIRGN--NPEQVRLCDLEDQAKSSKKGLWSE--GGGSHTIRDLKYT-IENPRNF----- 187
Query: 180 LDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAGIQAPAVARRPAAIVDTDTEET 239
+D+ +P+ I+E RDG +R LLP++ V V ++GI++P R E
Sbjct: 188 VDSLHQKPVNAIIEHVRDGCMVRALLLPDYYLVTVMLSGIKSPTFKR-----------EA 236
Query: 240 NGDVSAAEAVAPLNSAQRLAASTASAGQQSTDEPFALDAKYFTEMRVLNREVRIVLEGVD 299
+G T EPFA +AK+FTE R+L R+V+I+LE
Sbjct: 237 DGS--------------------------ETPEPFAAEAKFFTESRLLQRDVQIILESCP 270
Query: 300 KFKNLIGSVFYPDGETAKDLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRL 359
+ ++G++ +P+G ++ L++ G A+ ++WS + + A+ +L+AA+ AK+ ++
Sbjct: 271 N-QVILGTILHPNG----NITELLLKEGFARCVDWSMAVYTQGAE-KLRAAERSAKERKV 324
Query: 360 RMWTNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCP 419
R+W +YV P +N D+ F KV++VV+ D I+V +S Y + ++LSSIR P
Sbjct: 325 RIWKDYVAPTANLDQ-KDRQFVAKVMQVVNADAIVVKLNSGEY------KTIHLSSIRPP 377
Query: 420 KI----GNPRKDEK-----PAAYAREAREFLRTRLIGRQVNVQMEYSRKVVVEAAPVAAG 470
++ N KD++ Y EAREFLR +LIG++VNV ++Y R AA
Sbjct: 378 RLEGEEKNKDKDKRFRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIR---------AAT 428
Query: 471 AKGPAGTKGPAGTKGQAAAKGPAGEESVGATETRIIDFGSIFLLSPIKGEGDDASAVAQS 530
G PA E AT T G I
Sbjct: 429 NAMEMGV--------------PAFPERTCATVT----IGGI------------------- 451
Query: 531 NAAGQPAGVNVAELVVSRGLGNVINHR-DFEERSNYYDALLAAEARAKAGKKGCYSSKEP 589
N+AE +VS+GL VI +R D ++RS++YD LLAAEARA KG +S KE
Sbjct: 452 ---------NIAEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEV 502
Query: 590 PVMHIQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGV 649
P+ + D++ +KA+ F PFLQR+ R AVVEYV SG R K+ +PKETC I F +G+
Sbjct: 503 PIHRVADIS-GETQKAKQFFPFLQRAGRSEAVVEYVFSGSRLKLYMPKETCLITFLLAGI 561
Query: 650 RCP--GRN--------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNV 699
CP RN E YS EA+L ++ +LQR+VE+EVE++D G F+ L N+
Sbjct: 562 ECPRGSRNMPGGMQVAEPYSEEAMLFTKELVLQREVEVEVESMDIAGNFIDWLHIDGVNL 621
Query: 700 AVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGK 759
+V L+E L+K+ F ++R L AE+SA+ +K K+W NY E E K
Sbjct: 622 SVALVENALSKVH--FTAERSSYYKTLVSAEESARQRKEKLWANYEEKPNEEVAQVTEAK 679
Query: 760 QK 761
++
Sbjct: 680 ER 681
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 184/427 (43%), Gaps = 98/427 (22%)
Query: 366 VPPQ-SNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPKI--- 421
VP Q +S+A Q G V V+SG IIV P G ER++NLS+IR +
Sbjct: 5 VPAQVQSSQASAPQLQRGIVKMVLSGCAIIVRGQ--PRGGPPPERQINLSNIRAGALARR 62
Query: 422 ---GNP-RKDEKPAAYAREAREFLRTRLIGRQVNVQMEYSRKVVVEAAPVAAGAKGPAGT 477
G P KD +A +AREF+R ++IG++V +E
Sbjct: 63 AIQGQPDTKDTPDEPWAFQAREFMRKKVIGKEVCFTVE---------------------- 100
Query: 478 KGPAGTKGQAAAKGPAGEESVGATETRIIDFGSIFLLSPIKGEGDDASAVAQSNAAGQPA 537
K P G E +G ++L G D S
Sbjct: 101 -----------NKTPQGRE-----------YGMVYL-------GKDTS------------ 119
Query: 538 GVNVAELVVSRGLGNVINHRDFEERSNYYDA--LLAAEARAKAGKKGCYSSKEPPVMH-I 594
G N+AE +V+ GL V R R N + L E +AK+ KKG +S E H I
Sbjct: 120 GENIAESLVAEGLAMV---RREGIRGNNPEQVRLCDLEDQAKSSKKGLWS--EGGGSHTI 174
Query: 595 QDLTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGR 654
+DL ++ R+F+ L + + + A++E+V G + L+ + + SG++ P
Sbjct: 175 RDLKYT-IENPRNFVDSLHQ-KPVNAIIEHVRDGCMVRALLLPDYYLVTVMLSGIKSPTF 232
Query: 655 N---------ERYSNEALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLE 705
E ++ EA ++LQRDV+I +E+ LG++ N+ +LL+
Sbjct: 233 KREADGSETPEPFAAEAKFFTESRLLQRDVQIILESCPNQ-VILGTILHPNGNITELLLK 291
Query: 706 AGLAKLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLK 765
G A+ + + L AE+SAK +K++IW++Y V+ A ++ K ++ +
Sbjct: 292 EGFARCVDWSMAVYTQGAEKLRAAERSAKERKVRIWKDY-----VAPTANLDQKDRQFVA 346
Query: 766 KFWEVEN 772
K +V N
Sbjct: 347 KVMQVVN 353
>sp|Q9Y7U7|SND1_SCHPO Staphylococcal nuclease domain-containing protein 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snd1 PE=1 SV=1
Length = 878
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 212/458 (46%), Gaps = 75/458 (16%)
Query: 11 WYRARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLDEPFAWDSREF 70
+ + +K SGDS I L N EK +L+ + PR R G DEPFA++++EF
Sbjct: 4 YVSSMIKYAQSGDSFNI--LIKDNAKKITEKQFSLAYVECPRFRREG--DEPFAFEAQEF 59
Query: 71 LRKLCIGKEVTFRVDYAVPNIGREFGTVILGDKNVAMLVVSEGWAKVKEQGSQKGEAS-- 128
R+L +G+ + Y +P RE+G + + ++A ++ EG AK++ + ++ S
Sbjct: 60 SRRLVVGRPASVSTLYVIPTSKREYGRIRTSEFDLAESLLREGLAKLRPEATRNEGTSEN 119
Query: 129 PFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPM 188
+ L ++ A+ LG W P P+ N L A+KG+ +
Sbjct: 120 SYFVSLEEAQDHAQQYKLGIWG--PSDDVVVTEKANPA--------NPAKFLKAHKGKKL 169
Query: 189 QGIVEQARDGSTLRVYLL---PEFQFVQVFVAGIQAPAVARRPAAIVDTDTEETNGDVSA 245
GIVE R+G +RV L + Q V + +AG++ P + T E+T+
Sbjct: 170 NGIVETIRNGDQVRVRLFLSPKQHQLVTISLAGVRCPR-----STFTATSPEQTS----- 219
Query: 246 AEAVAPLNSAQRLAASTASAGQQSTDEPFALDAKYFTEMRVLNREVRIVLEGVDKFKN-- 303
S EP +AK F R+L R V V+E +D N
Sbjct: 220 -----------------------SEQEPCGDEAKQFVVTRLLQRNV--VIELLDLAPNGV 254
Query: 304 -LIGSVFYPDGETAKDLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRLRMW 362
+G+V +P G ++A L+ +GL + + + + + + L+ + +AK +RL +W
Sbjct: 255 SFLGNVLHPAG----NIATFLLSSGLGRVADNHISALGPETMQSLRTIERKAKISRLGIW 310
Query: 363 TNYVP--PQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPK 420
N P NS ++ D ++ V V+S D + V D+ E R+ LSSIR P+
Sbjct: 311 KNISVSIPDINSLSLKD--YSAVVSRVISTDTLEVRKDN------GVECRIQLSSIRHPR 362
Query: 421 IGNPRKDEKPAAYAREAREFLRTRLIGRQVNVQMEYSR 458
N EK A Y EAREFLR ++IG++V V +++ R
Sbjct: 363 PSN----EKEAPYQLEAREFLRKKIIGKRVQVSLDFIR 396
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 132/237 (55%), Gaps = 12/237 (5%)
Query: 538 GVNVAELVVSRGLGNVINHR-DFEERSNYYDALLAAEARAKAGKKGCYSSKEPPVMHIQD 596
G NVA +VV G VI +R D +RS YD L+ AE A+ G+KG +S K+P +I +
Sbjct: 415 GTNVALMVVKSGYATVIRYRMDSVDRSPIYDFLIEAEKAAQEGRKGMWSGKKPAYENIVN 474
Query: 597 LTMAPVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCP--GR 654
+ + ++ +R +L LQR+R++ ++E V+SG RF+ PKE C F+ +G+R P R
Sbjct: 475 ASESSLR-SRQYLSSLQRTRKLSVIIENVISGSRFRCFCPKENCYFMFACAGIRTPRTAR 533
Query: 655 NERYSNEAL----LLMRQKILQRDVEIEVETVDRTGTFLGSLWESR-TNVAVILLEAGLA 709
N++ E L + + +LQ D ++E+ +VD G FLG ++ + TN A+ LL GLA
Sbjct: 534 NDQEKGEPFAEESLSLAKSLLQHDAQVEILSVDNNGCFLGDIYVNHDTNFALKLLSQGLA 593
Query: 710 KLQTSFGSDRIPDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKK 766
Q + S E +AK QK+ +W +YV E+ A+ E + + +K+
Sbjct: 594 WCQGYASQSNVQYSQ-YHDTEAAAKEQKVGMWHDYVPPEK--KAASTEKESENTVKE 647
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 138/339 (40%), Gaps = 66/339 (19%)
Query: 40 EKTLTLSSIITPRLARRGGLDEPFAWDSREFLRKLCIGKEVTFRVDYA------VPNIGR 93
E + LSSI PR + + P+ ++REFLRK IGK V +D+ +P I
Sbjct: 350 ECRIQLSSIRHPRPSNEK--EAPYQLEAREFLRKKIIGKRVQVSLDFIRPGQNDLPAINN 407
Query: 94 EFGTVILGD-KNVAMLVVSEGWAKVKEQGSQKGEASPFLAELLRLEEQAKLQGLGRWSKV 152
TV L D NVA++VV G+A V + SP L+ E+ A+ G WS
Sbjct: 408 --CTVKLSDGTNVALMVVKSGYATVIRYRMDSVDRSPIYDFLIEAEKAAQEGRKGMWSGK 465
Query: 153 PGAAEASIRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFV 212
A E +I N S++ +++ + R + I+E GS R + E +
Sbjct: 466 KPAYE-NIVNASESSLRSRQYLSSL-----QRTRKLSVIIENVISGSRFRCFCPKENCYF 519
Query: 213 QVFVAGIQAPAVARRPAAIVDTDTEETNGDVSAAEAVAPLNSAQRLAASTASAGQQSTDE 272
AGI+ P AR Q E
Sbjct: 520 MFACAGIRTPRTAR---------------------------------------NDQEKGE 540
Query: 273 PFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKYI 332
PFA ++ + +L + ++ + VD +G + Y + +T + A++L+ GLA
Sbjct: 541 PFAEESLSLAK-SLLQHDAQVEILSVDNNGCFLGDI-YVNHDT--NFALKLLSQGLA--- 593
Query: 333 EWSANMMEEDAKRRLKAADLQ--AKKTRLRMWTNYVPPQ 369
W + + + D + AK+ ++ MW +YVPP+
Sbjct: 594 -WCQGYASQSNVQYSQYHDTEAAAKEQKVGMWHDYVPPE 631
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 135/325 (41%), Gaps = 44/325 (13%)
Query: 447 GRQVNVQMEYSRKVVVEAAPVAAGAKGPAGTKGPAGTKGQAAAKGPAGEESVGATETRII 506
G QV V++ S K AG + P T + ++ + P G+E+ TR++
Sbjct: 179 GDQVRVRLFLSPKQHQLVTISLAGVRCPRSTFTATSPEQTSSEQEPCGDEAKQFVVTRLL 238
Query: 507 DFGSIFLLSPIKGEGDDASAVAQSNAAGQPAGVNVAELVVSRGLGNVINHRDFEERSNYY 566
+ L + G V+ PAG N+A ++S GLG V ++
Sbjct: 239 QRNVVIELLDLAPNG-----VSFLGNVLHPAG-NIATFLLSSGLGRVADNHISALGPETM 292
Query: 567 DALLAAEARAKAGKKGCYSSKEPPVMHIQDLTMAPVKKARDFLPFLQRSRRIPAVVEYVL 626
+L E +AK + G + + + I L++ +D+ AVV V+
Sbjct: 293 QSLRTIERKAKISRLGIWKNISVSIPDINSLSL------KDY----------SAVVSRVI 336
Query: 627 SGHRFKVLIPKET-CSIAFSFSGVRCPG-RNER---YSNEALLLMRQKILQRDVEIEVET 681
S +V C I S +R P NE+ Y EA +R+KI+ + V++ ++
Sbjct: 337 STDTLEVRKDNGVECRI--QLSSIRHPRPSNEKEAPYQLEAREFLRKKIIGKRVQVSLDF 394
Query: 682 VDRTGTFLGSL------WESRTNVAVILLEAGLAK-LQTSFGS-DRIPDSHLLEQAEKSA 733
+ L ++ TNVA++++++G A ++ S DR P L +AEK+A
Sbjct: 395 IRPGQNDLPAINNCTVKLSDGTNVALMVVKSGYATVIRYRMDSVDRSPIYDFLIEAEKAA 454
Query: 734 KSQKLKIW-------ENYVEGEEVS 751
+ + +W EN V E S
Sbjct: 455 QEGRKGMWSGKKPAYENIVNASESS 479
Score = 38.9 bits (89), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 615 SRRIPAVVEYVLSGHRFKVLIP---KETCSIAFSFSGVRCPGR----NERYSNEALLLMR 667
S+ + ++++Y SG F +LI K+ FS + V CP +E ++ EA R
Sbjct: 2 SQYVSSMIKYAQSGDSFNILIKDNAKKITEKQFSLAYVECPRFRREGDEPFAFEAQEFSR 61
Query: 668 QKILQRDVEIEVETVDRTGTF-LGSLWESRTNVAVILLEAGLAKL--QTSFGSDRIPDSH 724
+ ++ R + V T G + S ++A LL GLAKL + + +S+
Sbjct: 62 RLVVGRPASVSTLYVIPTSKREYGRIRTSEFDLAESLLREGLAKLRPEATRNEGTSENSY 121
Query: 725 L--LEQAEKSAKSQKLKIW 741
LE+A+ A+ KL IW
Sbjct: 122 FVSLEEAQDHAQQYKLGIW 140
>sp|O60168|LCL3_SCHPO Probable endonuclease C19F8.04c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC19F8.04c PE=3 SV=1
Length = 230
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 23/194 (11%)
Query: 173 NFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAGIQAPAVARRPAAIV 232
N+ + ++ K + M G V + DG R Y P + + + + P +
Sbjct: 42 NYLNNSTVENRKYKTMFGYVTRVGDGDNFRFYHTPGGRL-------LGWHWLRKVPCSRS 94
Query: 233 DTDTEETNGDVSAAEAVAPLNSAQRLAASTASAGQQSTDEPFALDAKYFTEMRVLNREVR 292
D E + ++ +A +A G+Q ++P+AL+AK F ++ ++ VR
Sbjct: 95 DLSNETISVRLAGIDA-----------PESAHFGKQ--EQPYALEAKEFLHNKLYHKSVR 141
Query: 293 IVLEGVDKFKNLIGSVFY---PDGETAKDLAMELVENGLAKYIEWSANMMEEDAKRRLKA 349
I+ +D++ L+ V Y P KD+ +++ GLA E S + K L A
Sbjct: 142 IIPLKIDRYARLVAGVQYYPIPHFFWKKDIGPQMIRKGLAVVYEGSDGVFCPTKKECLLA 201
Query: 350 ADLQAKKTRLRMWT 363
++ AKK +L +W+
Sbjct: 202 LEIVAKKKKLSLWS 215
>sp|A1CRW4|LCL3_ASPCL Probable endonuclease lcl3 OS=Aspergillus clavatus (strain ATCC
1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=lcl3 PE=3 SV=1
Length = 291
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVF------YPDGETAKDLAMELV 324
++PFA +A + +LNR VR + D+++ + +V+ +P +D++ E++
Sbjct: 158 EQPFAREAHQWLTSYLLNRRVRAYIHRPDQYQRAVATVYVRRALDFPIPFRRRDVSYEML 217
Query: 325 ENGLAKYIE--WSANMMEEDAKRRLKAADLQAKKTRLRMWTNY 365
+ GLA E W A E +R+ + A+ AK +W ++
Sbjct: 218 KQGLATVYEAKWGAEFGGEAMERKYRKAEWWAKLRGTGLWKDF 260
>sp|B2AU25|LCL3_PODAN Probable endonuclease LCL3 OS=Podospora anserina (strain S / ATCC
MYA-4624 / DSM 980 / FGSC 10383) GN=LCL3 PE=3 SV=1
Length = 277
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 257 RLAASTASAGQQ--STDEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFY--PD 312
R+A A G T +PFA +A+ F + +LNR VR + D++ ++ +V+ P
Sbjct: 126 RIAGVDAPEGGHFGRTAQPFAAEAQKFLDSHILNRRVRAYVWRRDQYDRIVATVYVRRPP 185
Query: 313 GETAKDLAMELVENGLAKYIE 333
KD++MEL++ G A E
Sbjct: 186 FFQRKDVSMELLKQGFATTYE 206
>sp|E4ZVE5|LCL3_LEPMJ Probable endonuclease LCL3 OS=Leptosphaeria maculans (strain JN3 /
isolate v23.1.3 / race Av1-4-5-6-7-8) GN=LCL3 PE=3 SV=1
Length = 298
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 52/91 (57%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
+P++ +A + +L++ VR+ L D++ ++ V+Y +D+ +E+++ GLA
Sbjct: 170 QPYSKEALDWLTQLILHQRVRVRLYRRDQYDRVVAQVYYRRWFFRQDVGLEMLKMGLATV 229
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMW 362
E + D +++ +AA+ +AK++R MW
Sbjct: 230 YEAKSGAEFGDVEQQYRAAEEKAKESRAGMW 260
>sp|C7YQ31|LCL3_NECH7 Probable endonuclease LCL3 OS=Nectria haematococca (strain 77-13-4
/ ATCC MYA-4622 / FGSC 9596 / MPVI) GN=LCL3 PE=3 SV=1
Length = 267
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
+PFA +A + +LNR VR + D+++ ++ +V+ KD+ +E+++ GLA
Sbjct: 151 QPFAAEALDWLTNYILNRNVRAYIYKRDQYERVVATVYVRRFLFRKDVGLEMIKRGLATT 210
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWT 363
E + K + A +AK+ R MW+
Sbjct: 211 YEAKSGAEFGGMKEVYEKAQAKAKRKRKGMWS 242
>sp|A4RMK0|LCL3_MAGO7 Probable endonuclease LCL3 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=LCL3 PE=3 SV=2
Length = 257
Score = 40.4 bits (93), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 251 PLNSAQRLAASTASAGQQSTDEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFY 310
P+ A A A G+++ +PF+ +A F + +L R+VR + D+++ ++G+V+
Sbjct: 123 PVRIAGVDAPEAAHFGREA--QPFSAEALEFLKSYILGRDVRTYIYRRDQYERVVGTVWV 180
Query: 311 PDGETAKDLAMELVENGLA 329
KD+ +E+++ GLA
Sbjct: 181 RRWLLRKDVGLEMIKRGLA 199
>sp|B6H1W0|LCL3_PENCW Probable endonuclease lcl3 OS=Penicillium chrysogenum (strain ATCC
28089 / DSM 1075 / Wisconsin 54-1255) GN=lcl3 PE=3 SV=1
Length = 292
Score = 40.0 bits (92), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 13/105 (12%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVF------YPDGETAKDLAMELV 324
++PFA DA + + NR VR ++ D++ ++ SVF +P +D++ E++
Sbjct: 150 EQPFARDAHTWLTSYLSNRRVRALVHRQDQYSRVVASVFVRRAFDFPPFRR-RDVSYEML 208
Query: 325 ENGLAKYIEWSANMMEE----DAKRRLKAADLQAKKTRLRMWTNY 365
+ GLA E A + E +++ + A+ AKK +W +Y
Sbjct: 209 KRGLATVYE--AKIGSEFGGDKMEKKYRKAEWWAKKRARGLWKDY 251
>sp|Q2URN2|LCL3_ASPOR Probable endonuclease lcl3 OS=Aspergillus oryzae (strain ATCC 42149
/ RIB 40) GN=lcl3 PE=3 SV=1
Length = 277
Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVF------YPDGETAKDLAMELV 324
++P+A +A + VLNR VR+++ D+++ ++ S + +P +D++ E++
Sbjct: 147 EQPYAREAHEWLTSYVLNRRVRVLVHRQDQYQRVVASAYVRRAIDFPIPFRRRDVSYEML 206
Query: 325 ENGLAKYIEWSA--NMMEEDAKRRLKAADLQAKKTRLRMWTNY 365
GLA E A + +R+ + A+ AK+ +W Y
Sbjct: 207 TRGLATVYEAKAGSEFGGPELERKYREAESIAKRKGTGLWKGY 249
>sp|B8MY73|LCL3_ASPFN Probable endonuclease lcl3 OS=Aspergillus flavus (strain ATCC
200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167)
GN=lcl3 PE=3 SV=1
Length = 277
Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVF------YPDGETAKDLAMELV 324
++P+A +A + VLNR VR+++ D+++ ++ S + +P +D++ E++
Sbjct: 147 EQPYAREAHEWLTSYVLNRRVRVLVHRQDQYQRVVASAYVRRAIDFPIPFRRRDVSYEML 206
Query: 325 ENGLAKYIEWSA--NMMEEDAKRRLKAADLQAKKTRLRMWTNY 365
GLA E A + +R+ + A+ AK+ +W Y
Sbjct: 207 TRGLATVYEAKAGSEFGGPELERKYREAESIAKRKGTGLWKGY 249
>sp|Q0UVH1|LCL3_PHANO Probable endonuclease LCL3 OS=Phaeosphaeria nodorum (strain SN15 /
ATCC MYA-4574 / FGSC 10173) GN=LCL3 PE=3 SV=2
Length = 296
Score = 39.3 bits (90), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 49/92 (53%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAK 330
++P+A +A+ + + NR VR + D++ ++ V+ KD+ +E+++ GLA
Sbjct: 169 EQPYAKEAQEWLINLIHNRRVRAYIYRRDQYDRIVAQVYVRRWLFRKDVGLEMLKAGLAT 228
Query: 331 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMW 362
E + ++ + +AA+ +AK ++ MW
Sbjct: 229 IYEAKSGAEFGTSEAKYRAAEEKAKAQKVGMW 260
Score = 33.1 bits (74), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 43 LTLSSIITPRLARRGGLDEPFAWDSREFLRKLCIGKEV---TFRVDYAVPNIGREFGTVI 99
+ L+ + P LA G ++P+A +++E+L L + V +R D + + +
Sbjct: 152 IRLAGVDAPELAHWGREEQPYAKEAQEWLINLIHNRRVRAYIYRRDQYDRIVAQVYVRRW 211
Query: 100 LGDKNVAMLVVSEGWAKVKE--QGSQKGEASPFLAELLRLEEQAKLQGLGRWSK 151
L K+V + ++ G A + E G++ G + A+ EE+AK Q +G W+K
Sbjct: 212 LFRKDVGLEMLKAGLATIYEAKSGAEFGTSE---AKYRAAEEKAKAQKVGMWAK 262
>sp|C8Z8G3|LCL3_YEAS8 Probable endonuclease LCL3 OS=Saccharomyces cerevisiae (strain
Lalvin EC1118 / Prise de mousse) GN=LCL3 PE=3 SV=1
Length = 274
Score = 39.3 bits (90), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETA-KDLAMELVENGLAK 330
+PF +A + + R+L ++V + +D++ + V Y D KDL++E++++GLA
Sbjct: 168 QPFGNEALIWLQNRILGKKVWVKPLSIDQYNRCVARVSYWDWFGGWKDLSLEMLKDGLAV 227
Query: 331 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMW 362
E N +D + + + + A+ + +W
Sbjct: 228 VYEGKVNTEFDDREDKYRYYEFLARSRKKGLW 259
>sp|B5VIN9|LCL3_YEAS6 Probable endonuclease LCL3 OS=Saccharomyces cerevisiae (strain
AWRI1631) GN=LCL3 PE=3 SV=1
Length = 274
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETA-KDLAMELVENGLAK 330
+PF +A + + R+L ++V + +D++ + V Y D KDL++E++++GLA
Sbjct: 168 QPFGNEALIWLQNRILGKKVWVKPLSIDQYNRCVARVSYWDWFGGWKDLSLEMLKDGLAV 227
Query: 331 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMW 362
E N +D + + + + A+ + +W
Sbjct: 228 VYEGKVNTEFDDREDKYRYYEFLARSRKKGLW 259
>sp|P53153|LCL3_YEAST Probable endonuclease LCL3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=LCL3 PE=1 SV=1
Length = 274
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETA-KDLAMELVENGLAK 330
+PF +A + + R+L ++V + +D++ + V Y D KDL++E++++GLA
Sbjct: 168 QPFGNEALIWLQNRILGKKVWVKPLSIDQYNRCVARVSYWDWFGGWKDLSLEMLKDGLAV 227
Query: 331 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMW 362
E N +D + + + + A+ + +W
Sbjct: 228 VYEGKVNTEFDDREDKYRYYEFLARSRKKGLW 259
>sp|A6ZU94|LCL3_YEAS7 Probable endonuclease LCL3 OS=Saccharomyces cerevisiae (strain
YJM789) GN=LCL3 PE=3 SV=1
Length = 274
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETA-KDLAMELVENGLAK 330
+PF +A + + R+L ++V + +D++ + V Y D KDL++E++++GLA
Sbjct: 168 QPFGNEALIWLQNRILGKKVWVKPLSIDQYNRCVARVSYWDWFGGWKDLSLEMLKDGLAV 227
Query: 331 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMW 362
E N +D + + + + A+ + +W
Sbjct: 228 VYEGKVNTEFDDREDKYRYYEFLARSRKKGLW 259
>sp|C7GW31|LCL3_YEAS2 Probable endonuclease LCL3 OS=Saccharomyces cerevisiae (strain
JAY291) GN=LCL3 PE=3 SV=1
Length = 274
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETA-KDLAMELVENGLAK 330
+PF +A + + R+L ++V + +D++ + V Y D KDL++E++++GLA
Sbjct: 168 QPFGNEALIWLQNRILGKKVWVKPLSIDQYNRCVARVSYWDWFGGWKDLSLEMLKDGLAV 227
Query: 331 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMW 362
E N +D + + + + A+ + +W
Sbjct: 228 VYEGKVNTEFDDREDKYRYYEFLARSRKKGLW 259
>sp|B3LHF1|LCL3_YEAS1 Probable endonuclease LCL3 OS=Saccharomyces cerevisiae (strain
RM11-1a) GN=LCL3 PE=3 SV=1
Length = 274
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETA-KDLAMELVENGLAK 330
+PF +A + + R+L ++V + +D++ + V Y D KDL++E++++GLA
Sbjct: 168 QPFGNEALIWLQNRILGKKVWVKPLSIDQYNRCVARVSYWDWFGGWKDLSLEMLKDGLAV 227
Query: 331 YIEWSANMMEEDAKRRLKAADLQAKKTRLRMW 362
E N +D + + + + A+ + +W
Sbjct: 228 VYEGKVNTEFDDREDKYRYYEFLARSRKKGLW 259
>sp|A2Q8K8|LCL3_ASPNC Probable endonuclease lcl3 OS=Aspergillus niger (strain CBS 513.88
/ FGSC A1513) GN=lcl3 PE=3 SV=1
Length = 275
Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVF------YPDGETAKDLAMELVE 325
+PF +A + ++NR VRI + D+++ ++ +VF +P +D+ E++
Sbjct: 147 QPFGKEAHEWLTGYLINRRVRIYVHRQDQYQRVVATVFVRRALDFPVPFRRRDVGYEMLR 206
Query: 326 NGLAKYIE--WSANMMEEDAKRRLKAADLQAKKTRLRMWTNY 365
GLA E A E +++ ++A+ AK L +W +
Sbjct: 207 KGLATVYEAKVGAEFGGEVMEKKYRSAEWWAKARGLGLWKGF 248
>sp|B6QNP4|LCL3_PENMQ Probable endonuclease lcl3 OS=Penicillium marneffei (strain ATCC
18224 / CBS 334.59 / QM 7333) GN=lcl3 PE=3 SV=1
Length = 344
Score = 38.5 bits (88), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 160 IRNLPPSAIGDSSNFNAMALLDANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQV-FVAG 218
+R P + SS F + +LL G V DG R++ P + V ++
Sbjct: 98 LRRFPEATDISSSYFRSRSLL---------GRVTSVGDGDNFRIFHTPGGRLVGWGWLPW 148
Query: 219 IQAPAVARRPAAIVDTDTEETNGDVSAAEAVAPLNSAQRLAASTASAGQQSTDEPFALDA 278
++ P + + ++ + A AP A G+ + +P+A +A
Sbjct: 149 MKVPTARK--------ELKDKTVHIRLAGVDAP---------ELAHFGRPA--QPYAYEA 189
Query: 279 KYFTEMRVLNREVRIVLEGVDKFKNLIGSVF------YPDGETAKDLAMELVENGLAKYI 332
+ ++NR VR + D++K +I +V+ +P +D++ E++ GLA
Sbjct: 190 HMWLTSYLMNRRVRAYVHRPDQYKRVIATVYVRRWLDFPPLRR-RDVSYEMLRRGLATVY 248
Query: 333 EWSANMM--EEDAKRRLKAADLQAKKTRLRMWTNY 365
E + + + +R+ + A++ AK R +W ++
Sbjct: 249 EAKSGVEFGGTENERKYREAEMLAKNRRQGLWKDF 283
>sp|A7ECE0|LCL3_SCLS1 Probable endonuclease lcl3 OS=Sclerotinia sclerotiorum (strain ATCC
18683 / 1980 / Ss-1) GN=lcl3 PE=3 SV=1
Length = 264
Score = 38.5 bits (88), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
+PF+ +A + + NR VR + D++ ++ +V+ KD+ E+++ G+A
Sbjct: 149 QPFSAEALAWLRDYIQNRRVRAYIYRRDQYNRVVATVWVRRFLFRKDVGKEMLKAGMATV 208
Query: 332 IEWSANMMEE--DAKRRLKAADLQAKKTRLRMWT 363
E A M E D + + +A + +AKK +L MW+
Sbjct: 209 YE--AKMGAEFGDFEAQYRAIEKEAKKNKLGMWS 240
>sp|A6RP27|LCL3_BOTFB Probable endonuclease lcl3 OS=Botryotinia fuckeliana (strain
B05.10) GN=lcl3 PE=3 SV=1
Length = 263
Score = 38.1 bits (87), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
+PF+ +A + + NR VR + D++ ++ +V+ KD+ E++ G+A
Sbjct: 148 QPFSAEALAWLREYIQNRRVRAYIYKRDQYDRVVATVWVRRFLVRKDVGKEMLRAGMATV 207
Query: 332 IEWSANMMEE--DAKRRLKAADLQAKKTRLRMWT 363
E A M E D + + +A + +AKK +L MW+
Sbjct: 208 YE--AKMGAEFGDFEAQYRAIEEEAKKKKLGMWS 239
>sp|A5E1Q5|LCL3_LODEL Probable endonuclease LCL3 OS=Lodderomyces elongisporus (strain
ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL
YB-4239) GN=LCL3 PE=3 SV=1
Length = 238
Score = 38.1 bits (87), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 47/92 (51%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
+PF+ DA + + +L R V + +D++K ++G KD++ E+++NG+A
Sbjct: 128 QPFSEDALLWLKNYLLGRYVTVTPYSIDQYKRIVGRCQVWKWNGKKDVSAEMLKNGVAIV 187
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWT 363
E D + R ++ + +AK + +W+
Sbjct: 188 YEGKVGAEFGDNEDRYRSLEKRAKWLKRGVWS 219
>sp|C9SI22|LCL3_VERA1 Probable endonuclease LCL3 OS=Verticillium albo-atrum (strain
VaMs.102 / ATCC MYA-4576 / FGSC 10136) GN=LCL3 PE=3 SV=1
Length = 287
Score = 37.7 bits (86), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 257 RLAASTASAGQQ--STDEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGE 314
RLA A G +PFA +A+ +L+R VR L D++ ++ +V
Sbjct: 137 RLAGIDAPEGPHFGRPGQPFAAEAQAHLSKYILHRRVRAHLHKRDQYNRIVATVSTRQPF 196
Query: 315 TAKDLAMELVENGLAKYIE 333
KD+ +E+++ GLA E
Sbjct: 197 IKKDVGLEMLKQGLATTYE 215
>sp|A1D4S1|LCL3_NEOFI Probable endonuclease lcl3 OS=Neosartorya fischeri (strain ATCC
1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=lcl3 PE=3
SV=1
Length = 295
Score = 37.4 bits (85), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVF------YPDGETAKDLAMELV 324
++PFA +A + +L R VR + D+++ + SV+ +P +D++ E++
Sbjct: 163 EQPFAREAHQWLTSYLLGRRVRAYIHRPDQYQRAVASVYVRRLLDFPPLRR-RDVSYEML 221
Query: 325 ENGLAKYIE--WSANMMEEDAKRRLKAADLQAKKTRLRMWTNY 365
+ GLA E A E +R+ K A+ AK + +W +Y
Sbjct: 222 KRGLATVYEAKIGAEFGGEAMERKYKKAEWWAKLRGVGLWKDY 264
>sp|Q4WK77|LCL3_ASPFU Probable endonuclease lcl3 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=lcl3 PE=3
SV=1
Length = 296
Score = 36.6 bits (83), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVF------YPDGETAKDLAMELV 324
++PFA +A + + R VR + D+++ + SV+ +P +D++ E++
Sbjct: 164 EQPFAREAHQWLTSYLFGRRVRAYIHRPDQYQRAVASVYVRRLLDFPPFRR-RDVSYEML 222
Query: 325 ENGLAKYIE--WSANMMEEDAKRRLKAADLQAKKTRLRMWTNY 365
+ GLA E A E +R+ K A+ AK + +W +Y
Sbjct: 223 KRGLATVYEAKIGAEFGGEAMERKYKKAEWWAKLRGVGLWKDY 265
>sp|B0XMZ5|LCL3_ASPFC Probable endonuclease lcl3 OS=Neosartorya fumigata (strain CEA10 /
CBS 144.89 / FGSC A1163) GN=lcl3 PE=3 SV=1
Length = 296
Score = 36.6 bits (83), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 271 DEPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVF------YPDGETAKDLAMELV 324
++PFA +A + + R VR + D+++ + SV+ +P +D++ E++
Sbjct: 164 EQPFAREAHQWLTSYLFGRRVRAYIHRPDQYQRAVASVYVRRLLDFPPFRR-RDVSYEML 222
Query: 325 ENGLAKYIE--WSANMMEEDAKRRLKAADLQAKKTRLRMWTNY 365
+ GLA E A E +R+ K A+ AK + +W +Y
Sbjct: 223 KRGLATVYEAKIGAEFGGEAMERKYKKAEWWAKLRGVGLWKDY 265
>sp|B2WC78|LCL3_PYRTR Probable endonuclease lcl3 OS=Pyrenophora tritici-repentis (strain
Pt-1C-BFP) GN=lcl3 PE=3 SV=1
Length = 271
Score = 36.6 bits (83), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 45/91 (49%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
+PF+ +A + + NR VR + D++ ++ V+ KD+ +E++ GLA
Sbjct: 144 QPFSKEAHDWLINLIHNRRVRAYIYRRDQYDRVVAQVYVRRWLFRKDVGLEMLRAGLATV 203
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMW 362
E + + +AA+ +A+ +++ MW
Sbjct: 204 YEAKTGAEFGTVEDKYRAAEQKARDSKVGMW 234
>sp|Q874L8|LCL3_KLUDE Probable endonuclease LCL3 OS=Kluyveromyces delphensis GN=LCL3 PE=3
SV=1
Length = 258
Score = 36.2 bits (82), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 48/92 (52%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
+P++ +A + + +L +++ I +D++ + S+ Y KDL++++++ GLA
Sbjct: 153 QPYSEEALIWLQHEILGKKLWIKPLNIDQYGRCVASIRYWTRFGYKDLSLQMLKEGLALV 212
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWT 363
E +N ++ + + AK R+ MW+
Sbjct: 213 YEGKSNAEFGGREKIYRRHEFIAKSKRIGMWS 244
>sp|P00644|NUC_STAAU Thermonuclease OS=Staphylococcus aureus GN=nuc PE=1 SV=1
Length = 231
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 656 ERYSNEALLLMRQKILQRDVEIEVE-----TVDRTGTFLGSLWESRTNVAVILLEAGLAK 710
E+Y EA + K+++ +IEVE D+ G L ++ V L+ GLAK
Sbjct: 134 EKYGPEASAFTK-KMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAK 192
Query: 711 LQTSFGSDRIPDSHLLEQAEKSAKSQKLKIW 741
+ + + + HL ++E AK +KL IW
Sbjct: 193 VAYVYKPNNTHEQHL-RKSEAQAKKEKLNIW 222
>sp|P43269|NUC_STAIN Thermonuclease OS=Staphylococcus intermedius GN=nucI PE=3 SV=1
Length = 168
Score = 34.7 bits (78), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 675 VEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKSAK 734
+E + E D+ G L +W V L + GLA+ + +D+ L+EQA+K A+
Sbjct: 102 LEYDREPKDKYGRTLAYVWLGDEMFNVKLAKEGLARAKFYPPNDKY--RILIEQAQKEAQ 159
Query: 735 SQKLKIWE 742
++L IWE
Sbjct: 160 KKQLNIWE 167
>sp|P39060|COIA1_HUMAN Collagen alpha-1(XVIII) chain OS=Homo sapiens GN=COL18A1 PE=1 SV=5
Length = 1754
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 36/75 (48%), Gaps = 15/75 (20%)
Query: 463 EAAPVAAGAKGPAGTKGPAGTKGQAAAKGPAGEESVGATETRIIDFGSIFLLSPIKGEGD 522
E P AG GPAG KG G+KG+ + GP GE+ + GSIF SP G
Sbjct: 1144 EGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKG---------EPGSIF--SPDGG--- 1189
Query: 523 DASAVAQSNAAGQPA 537
A AQ A G+P
Sbjct: 1190 -ALGPAQKGAKGEPG 1203
>sp|Q162S7|ATPA_ROSDO ATP synthase subunit alpha OS=Roseobacter denitrificans (strain
ATCC 33942 / OCh 114) GN=atpA PE=3 SV=1
Length = 512
Score = 34.3 bits (77), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 20/101 (19%)
Query: 16 VKAVPSGDSL---VITALSNP--NPGPPREKTLTLSSIITPRLARRGGLDEPFAWDSREF 70
+ +VP+GD L V+ L NP GP + KT +++ + P + R + EP A +
Sbjct: 94 IVSVPTGDELLGRVVDGLGNPIDGKGPIKTKTTSVADVKAPGIIPRKSVHEPMATGLKA- 152
Query: 71 LRKLCIGKEVTFRVDYAVPNIGREFGTVILGDKNVAMLVVS 111
VD +P IGR +I+GD+ V+
Sbjct: 153 -------------VDSMIP-IGRGQRELIIGDRQTGKTAVA 179
>sp|B6JYT1|LCL3_SCHJY Probable endonuclease lcl3 OS=Schizosaccharomyces japonicus (strain
yFS275 / FY16936) GN=lcl3 PE=3 SV=1
Length = 233
Score = 33.9 bits (76), Expect = 4.6, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLI-GSVFYPDGET--AKDLAMELVENGL 328
+PF+L+AK F ++ +R VR+ D++ + G +YP +D+ +LV GL
Sbjct: 123 QPFSLEAKQFLARKLEHRSVRVYPLHRDQYNRAVCGVTYYPIRWLFFKRDIGPQLVSRGL 182
Query: 329 AKYIEWSANMMEEDAKRRLKAADLQAKKTRLRM 361
A E + + K L A+K +L M
Sbjct: 183 AVVYEGANSSYYPTEKSVLMKIQETARKRKLGM 215
>sp|P22997|PARB4_ECOLX Protein ParB OS=Escherichia coli GN=parB PE=4 SV=1
Length = 281
Score = 33.9 bits (76), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 14/131 (10%)
Query: 622 VEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRNERYSNEALLLMRQKILQRDVEIEVET 681
V ++ G VL+ K+ + + P + + + A + + +R V ++ +
Sbjct: 136 VVRIIDGDTIDVLVDKQPVRV--RLVDIDAPEKRQAFGERARQALAGMVFRRHVLVDEKD 193
Query: 682 VDRTGTFLGSLW-----ESRT----NVAVILLEAGLAKLQTSFGSDRIPDSHLLEQAEKS 732
DR G LG++W SR NV ++ G+A G P+ LEQ
Sbjct: 194 TDRYGRTLGTVWVNMELASRPPQPRNVNAAMVHQGMAWAYRFHGRAADPEMLRLEQ---E 250
Query: 733 AKSQKLKIWEN 743
A+ +++ +W +
Sbjct: 251 ARGKRVGLWSD 261
>sp|Q2J2F8|KCY_RHOP2 Cytidylate kinase OS=Rhodopseudomonas palustris (strain HaA2)
GN=cmk PE=3 SV=1
Length = 212
Score = 33.5 bits (75), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Query: 92 GREFGTVILGDKNVAMLVVSEGWAKVKE---QGSQKGEASP---FLAELLRLEEQAKLQG 145
GR+ GTVI D +V + VV++ + + + +GE + LA++LR +E+ K
Sbjct: 112 GRDIGTVICPDADVKIFVVADPGVRARRRALEAQARGEPADEAVILADILRRDERDK--- 168
Query: 146 LGRWSKVPGAAEASIRNLPPSAIGDSSNFN 175
G + A ++ P + + D+SN +
Sbjct: 169 --------GRSAAPLKQAPDAVLLDNSNLD 190
>sp|Q8NXI6|NUC_STAAW Thermonuclease OS=Staphylococcus aureus (strain MW2) GN=nuc PE=1
SV=1
Length = 228
Score = 33.5 bits (75), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 656 ERYSNEALLLMRQKILQRDVEIEVE-----TVDRTGTFLGSLWESRTNVAVILLEAGLAK 710
E+Y EA + K+++ +IEVE D+ G L ++ V L+ GLAK
Sbjct: 131 EKYGPEASAFTK-KMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAK 189
Query: 711 LQTSFGSDRIPDSHLLEQAEKSAKSQKLKIW 741
+ + + + LL ++E AK +KL IW
Sbjct: 190 VAYVYKPNNTHE-QLLRKSEAQAKKEKLNIW 219
>sp|Q6GB41|NUC_STAAS Thermonuclease OS=Staphylococcus aureus (strain MSSA476) GN=nuc
PE=3 SV=1
Length = 228
Score = 33.5 bits (75), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 656 ERYSNEALLLMRQKILQRDVEIEVE-----TVDRTGTFLGSLWESRTNVAVILLEAGLAK 710
E+Y EA + K+++ +IEVE D+ G L ++ V L+ GLAK
Sbjct: 131 EKYGPEASAFTK-KMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAK 189
Query: 711 LQTSFGSDRIPDSHLLEQAEKSAKSQKLKIW 741
+ + + + LL ++E AK +KL IW
Sbjct: 190 VAYVYKPNNTHE-QLLRKSEAQAKKEKLNIW 219
>sp|Q5HHM4|NUC_STAAC Thermonuclease OS=Staphylococcus aureus (strain COL) GN=nuc PE=3
SV=1
Length = 228
Score = 33.5 bits (75), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 656 ERYSNEALLLMRQKILQRDVEIEVE-----TVDRTGTFLGSLWESRTNVAVILLEAGLAK 710
E+Y EA + K+++ +IEVE D+ G L ++ V L+ GLAK
Sbjct: 131 EKYGPEASAFTK-KMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAK 189
Query: 711 LQTSFGSDRIPDSHLLEQAEKSAKSQKLKIW 741
+ + + + LL ++E AK +KL IW
Sbjct: 190 VAYVYKPNNTHE-QLLRKSEAQAKKEKLNIW 219
>sp|Q6BSY9|LCL3_DEBHA Probable endonuclease LCL3 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=LCL3 PE=3 SV=2
Length = 235
Score = 33.1 bits (74), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 42/92 (45%)
Query: 272 EPFALDAKYFTEMRVLNREVRIVLEGVDKFKNLIGSVFYPDGETAKDLAMELVENGLAKY 331
+P++ +A + + + R V + +D++K L+G KD++ E++ NGL
Sbjct: 124 QPYSEEALAWLKNYIFGRNVVVTPYSIDQYKRLVGRAQVWKWTGKKDISAEMLRNGLGVV 183
Query: 332 IEWSANMMEEDAKRRLKAADLQAKKTRLRMWT 363
E D + + + +AK R +W+
Sbjct: 184 YEGKIGAEFGDNESWYRKLEARAKWLRRGLWS 215
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 287,126,557
Number of Sequences: 539616
Number of extensions: 12219123
Number of successful extensions: 51612
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 41849
Number of HSP's gapped (non-prelim): 9256
length of query: 792
length of database: 191,569,459
effective HSP length: 126
effective length of query: 666
effective length of database: 123,577,843
effective search space: 82302843438
effective search space used: 82302843438
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)